AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031459.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031459.01.T01 MTR_6g023460 98.571 140 2 0 1 140 3 142 1.74e-98 279
MsG0680031459.01.T01 MTR_4g103655 61.194 134 52 0 6 139 6 139 3.45e-56 172
MsG0680031459.01.T01 MTR_4g103650 60.448 134 53 0 6 139 2 135 2.46e-55 170
MsG0680031459.01.T01 MTR_4g103630 59.701 134 54 0 6 139 6 139 4.72e-55 169
MsG0680031459.01.T01 MTR_3g089070 57.554 139 59 0 1 139 1 139 2.75e-54 167
MsG0680031459.01.T01 MTR_3g089090 57.664 137 58 0 3 139 2 138 3.95e-54 167
MsG0680031459.01.T01 MTR_8g078270 54.135 133 56 3 10 139 57 187 8.17e-40 132
MsG0680031459.01.T01 MTR_1g046950 42.029 138 69 2 9 139 7 140 1.85e-32 112
MsG0680031459.01.T01 MTR_3g067610 42.748 131 72 1 9 139 8 135 9.62e-32 110
MsG0680031459.01.T01 MTR_5g079340 42.105 133 73 2 9 139 7 137 1.96e-31 109
MsG0680031459.01.T01 MTR_8g107110 41.538 130 76 0 10 139 28 157 2.60e-29 105
MsG0680031459.01.T01 MTR_1g047100 39.416 137 73 2 9 139 7 139 2.54e-28 101
MsG0680031459.01.T01 MTR_4g067270 39.552 134 78 2 9 139 8 141 1.14e-26 97.8
MsG0680031459.01.T01 MTR_8g105230 40.625 128 75 1 10 136 40 167 1.33e-25 96.3
MsG0680031459.01.T01 MTR_6g079570 40.909 132 77 1 9 139 29 160 1.37e-25 95.9
MsG0680031459.01.T01 MTR_1g032070 36.842 133 83 1 9 140 49 181 2.94e-24 92.8
MsG0680031459.01.T01 MTR_7g075040 38.667 150 80 4 1 139 42 190 1.01e-23 91.3
MsG0680031459.01.T01 MTR_8g036075 37.063 143 81 3 6 139 49 191 1.07e-22 89.0
MsG0680031459.01.T01 MTR_8g066630 31.159 138 91 1 2 135 13 150 5.92e-22 86.3
MsG0680031459.01.T01 MTR_5g017550 32.824 131 88 0 10 140 52 182 1.76e-21 85.5
MsG0680031459.01.T01 MTR_5g008705 36.641 131 74 2 14 139 2 128 3.41e-21 83.2
MsG0680031459.01.T01 MTR_1g076650 32.143 140 94 1 2 140 8 147 4.74e-21 83.6
MsG0680031459.01.T01 MTR_1g076650 40.299 67 40 0 73 139 7 73 9.61e-12 59.3
MsG0680031459.01.T01 MTR_5g017510 34.091 132 86 1 10 140 52 183 1.00e-20 83.6
MsG0680031459.01.T01 MTR_5g017560 34.091 132 86 1 10 140 52 183 1.00e-20 83.6
MsG0680031459.01.T01 MTR_7g087610 28.571 140 99 1 2 140 8 147 4.25e-20 80.9
MsG0680031459.01.T01 MTR_7g089760 35.075 134 84 2 9 139 8 141 4.38e-20 80.9
MsG0680031459.01.T01 MTR_4g086260 33.846 130 85 1 10 139 61 189 4.96e-20 82.0
MsG0680031459.01.T01 MTR_1g041285 31.429 140 95 1 2 140 8 147 3.98e-19 78.6
MsG0680031459.01.T01 MTR_1g071150 28.777 139 99 0 2 140 8 146 4.14e-19 78.2
MsG0680031459.01.T01 MTR_6g025320 27.857 140 100 1 2 140 8 147 1.11e-18 77.4
MsG0680031459.01.T01 MTR_4g112460 30.282 142 96 1 1 139 6 147 2.08e-18 77.0
MsG0680031459.01.T01 MTR_5g088320 27.143 140 101 1 2 140 8 147 5.87e-18 75.5
MsG0680031459.01.T01 MTR_5g088320 37.313 67 42 0 73 139 7 73 7.42e-11 57.0
MsG0680031459.01.T01 MTR_2g098890 35.294 136 83 2 9 139 67 202 3.67e-17 74.7
MsG0680031459.01.T01 MTR_4g115170 34.667 150 79 3 9 139 67 216 6.25e-17 74.3
MsG0680031459.01.T01 MTR_5g027000 29.286 140 98 1 1 139 17 156 7.57e-17 72.8
MsG0680031459.01.T01 MTR_5g008695 34.783 115 64 2 31 138 2 112 1.00e-16 71.2
MsG0680031459.01.T01 MTR_7g074240 32.639 144 84 2 9 139 27 170 2.10e-16 72.0
MsG0680031459.01.T01 MTR_3g083470 32.331 133 79 3 9 140 96 218 2.48e-16 72.8
MsG0680031459.01.T01 MTR_1g030440 33.803 142 77 2 10 140 26 161 7.61e-16 70.5
MsG0680031459.01.T01 MTR_8g069915 26.950 141 100 1 2 139 8 148 7.67e-16 70.5
MsG0680031459.01.T01 MTR_1g026190 27.068 133 92 2 9 139 390 519 6.44e-13 65.1
MsG0680031459.01.T01 MTR_7g090450 30.556 144 86 4 6 139 73 212 2.98e-12 61.6
MsG0680031459.01.T01 MTR_5g089320 27.820 133 91 2 9 139 376 505 8.78e-12 61.6
MsG0680031459.01.T01 MTR_6g007613 29.771 131 91 1 10 139 33 163 1.15e-11 59.3
MsG0680031459.01.T01 MTR_3g088655 32.903 155 79 5 5 140 7 155 1.19e-11 59.3
MsG0680031459.01.T01 MTR_5g009830 27.273 132 91 2 10 139 375 503 2.19e-11 60.5
MsG0680031459.01.T01 MTR_8g099095 28.030 132 90 2 10 139 375 503 2.24e-11 60.5
MsG0680031459.01.T01 MTR_5g079470 39.683 63 37 1 9 71 13 74 2.61e-11 56.6
MsG0680031459.01.T01 MTR_0168s0120 26.606 109 79 1 33 140 3 111 3.55e-11 57.0
MsG0680031459.01.T01 MTR_6g025320 26.606 109 79 1 33 140 3 111 3.55e-11 57.0
MsG0680031459.01.T01 MTR_7g074020 29.008 131 92 1 10 139 34 164 3.64e-11 58.2
MsG0680031459.01.T01 MTR_7g068710 28.462 130 93 0 10 139 365 494 5.35e-11 59.3
MsG0680031459.01.T01 MTR_5g092810 28.030 132 90 2 10 139 401 529 5.69e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031459.01.T01 AT1G76650 49.275 138 70 0 2 139 39 176 5.36e-42 137
MsG0680031459.01.T01 AT1G76650 49.275 138 70 0 2 139 39 176 5.36e-42 137
MsG0680031459.01.T01 AT1G76640 50.376 133 63 1 10 139 26 158 2.17e-40 133
MsG0680031459.01.T01 AT3G50770 48.175 137 65 2 9 139 67 203 5.57e-38 128
MsG0680031459.01.T01 AT5G42380 49.275 138 68 1 4 139 47 184 4.07e-37 125
MsG0680031459.01.T01 AT3G01830 48.592 142 68 3 1 139 6 145 1.78e-36 122
MsG0680031459.01.T01 AT1G76650 44.928 138 66 1 2 139 39 166 1.31e-35 121
MsG0680031459.01.T01 AT5G37770 43.382 136 72 1 9 139 20 155 9.88e-32 111
MsG0680031459.01.T01 AT5G37770 43.382 136 72 1 9 139 20 155 9.88e-32 111
MsG0680031459.01.T01 AT1G66400 37.778 135 81 1 9 140 18 152 1.87e-27 100
MsG0680031459.01.T01 AT1G24620 39.695 131 78 1 10 139 41 171 5.94e-26 97.1
MsG0680031459.01.T01 AT1G18210 38.168 131 78 1 9 139 26 153 7.85e-25 93.6
MsG0680031459.01.T01 AT1G18210 38.168 131 78 1 9 139 26 153 7.85e-25 93.6
MsG0680031459.01.T01 AT5G17470 36.567 134 80 2 10 139 6 138 2.30e-24 91.7
MsG0680031459.01.T01 AT1G73630 36.641 131 80 1 9 139 23 150 4.75e-24 91.7
MsG0680031459.01.T01 AT1G05990 37.410 139 83 2 5 139 4 142 6.53e-24 90.9
MsG0680031459.01.T01 AT2G43290 35.211 142 78 3 9 139 68 206 3.16e-22 88.2
MsG0680031459.01.T01 AT3G59440 35.338 133 84 1 9 139 54 186 1.24e-21 86.3
MsG0680031459.01.T01 AT4G12860 37.313 134 81 2 9 139 8 141 1.36e-21 84.7
MsG0680031459.01.T01 AT4G03290 35.461 141 85 2 5 139 4 144 2.15e-21 84.3
MsG0680031459.01.T01 AT3G07490 36.567 134 82 2 9 139 8 141 1.31e-20 82.4
MsG0680031459.01.T01 AT2G36180 35.294 136 80 3 10 139 4 137 2.67e-20 81.3
MsG0680031459.01.T01 AT2G15680 33.333 138 87 2 4 139 48 182 3.30e-20 82.0
MsG0680031459.01.T01 AT2G41100 30.263 152 88 1 2 135 62 213 7.65e-20 83.2
MsG0680031459.01.T01 AT2G41100 30.263 152 88 1 2 135 62 213 7.65e-20 83.2
MsG0680031459.01.T01 AT2G41100 30.263 152 88 1 2 135 62 213 7.65e-20 83.2
MsG0680031459.01.T01 AT2G41100 30.263 152 88 1 2 135 97 248 1.08e-19 83.2
MsG0680031459.01.T01 AT2G41100 29.677 155 92 1 2 139 8 162 1.60e-19 82.8
MsG0680031459.01.T01 AT2G41100 30.263 152 88 1 2 135 97 248 1.08e-19 83.2
MsG0680031459.01.T01 AT2G41100 29.677 155 92 1 2 139 8 162 1.60e-19 82.8
MsG0680031459.01.T01 AT4G14640 31.944 144 89 2 2 140 9 148 3.06e-19 79.0
MsG0680031459.01.T01 AT3G01830 45.045 111 54 3 1 107 6 113 3.51e-19 78.2
MsG0680031459.01.T01 AT5G21274 28.571 140 99 1 2 140 8 147 5.22e-19 78.2
MsG0680031459.01.T01 AT3G22930 29.286 140 98 1 2 140 31 170 9.29e-19 78.2
MsG0680031459.01.T01 AT3G56800 27.857 140 100 1 2 140 8 147 9.72e-19 77.4
MsG0680031459.01.T01 AT2G27030 27.857 140 100 1 2 140 8 147 9.72e-19 77.4
MsG0680031459.01.T01 AT2G41110 27.857 140 100 1 2 140 8 147 9.72e-19 77.4
MsG0680031459.01.T01 AT3G43810 27.857 140 100 1 2 140 8 147 1.17e-18 77.4
MsG0680031459.01.T01 AT5G37780 27.143 140 101 1 2 140 8 147 1.77e-18 76.6
MsG0680031459.01.T01 AT5G37780 37.313 67 42 0 73 139 7 73 7.69e-11 57.0
MsG0680031459.01.T01 AT1G66410 27.143 140 101 1 2 140 8 147 1.77e-18 76.6
MsG0680031459.01.T01 AT1G66410 37.313 67 42 0 73 139 7 73 7.69e-11 57.0
MsG0680031459.01.T01 AT1G18530 31.206 141 94 2 2 139 3 143 1.98e-18 77.0
MsG0680031459.01.T01 AT2G27030 27.857 140 100 1 2 140 8 147 3.20e-18 77.0
MsG0680031459.01.T01 AT3G43810 27.857 140 100 1 2 140 8 147 7.36e-18 76.6
MsG0680031459.01.T01 AT3G50360 32.824 131 87 1 10 139 31 161 7.92e-17 73.2
MsG0680031459.01.T01 AT1G32250 29.787 141 92 2 2 135 12 152 8.73e-17 72.8
MsG0680031459.01.T01 AT3G03400 34.884 129 75 4 10 132 9 134 9.17e-17 72.0
MsG0680031459.01.T01 AT2G41110 25.658 152 100 2 2 140 8 159 2.00e-16 71.6
MsG0680031459.01.T01 AT3G25600 29.078 141 97 2 2 139 8 148 5.34e-16 70.5
MsG0680031459.01.T01 AT4G37010 29.771 131 91 1 10 139 31 161 1.51e-15 69.7
MsG0680031459.01.T01 AT4G37010 29.771 131 91 1 10 139 35 165 1.60e-15 69.7
MsG0680031459.01.T01 AT3G51920 27.143 140 101 1 2 140 8 147 8.25e-15 67.4
MsG0680031459.01.T01 AT3G03000 30.147 136 93 1 2 135 16 151 9.97e-15 67.4
MsG0680031459.01.T01 AT5G37780 24.516 155 101 2 2 140 8 162 1.97e-14 66.6
MsG0680031459.01.T01 AT3G10190 28.676 136 95 2 6 139 70 205 2.68e-14 67.0
MsG0680031459.01.T01 AT4G14640 30.952 126 78 2 20 140 9 130 1.23e-13 63.9
MsG0680031459.01.T01 AT2G41410 30.070 143 96 3 2 140 66 208 2.22e-13 64.7
MsG0680031459.01.T01 AT3G03410 30.303 132 84 1 9 140 5 128 3.10e-13 62.8
MsG0680031459.01.T01 AT2G41090 24.638 138 102 1 3 140 9 144 3.76e-13 63.9
MsG0680031459.01.T01 AT4G04695 28.462 130 92 1 10 139 340 468 4.90e-13 65.5
MsG0680031459.01.T01 AT5G37780 27.049 122 88 1 20 140 13 134 5.01e-13 62.4
MsG0680031459.01.T01 AT1G66410 27.049 122 88 1 20 140 36 157 6.23e-13 62.8
MsG0680031459.01.T01 AT5G37780 27.049 122 88 1 20 140 52 173 7.73e-13 62.8
MsG0680031459.01.T01 AT1G12310 31.206 141 92 2 2 140 9 146 9.19e-13 62.0
MsG0680031459.01.T01 AT4G20780 30.921 152 84 3 9 139 32 183 1.95e-12 62.0
MsG0680031459.01.T01 AT1G62820 30.496 141 93 2 2 140 9 146 3.37e-12 60.5
MsG0680031459.01.T01 AT3G51850 32.331 133 84 3 10 139 363 492 4.78e-12 62.4
MsG0680031459.01.T01 AT1G66410 26.606 109 79 1 33 140 3 111 1.05e-11 58.2
MsG0680031459.01.T01 AT1G66410 26.606 109 79 1 33 140 3 111 1.05e-11 58.2
MsG0680031459.01.T01 AT4G04700 28.788 132 89 2 10 139 340 468 1.67e-11 60.8
MsG0680031459.01.T01 AT2G31500 29.078 141 97 2 2 139 367 507 1.70e-11 60.8
MsG0680031459.01.T01 AT1G76040 30.075 133 88 2 9 139 181 310 1.95e-11 60.5
MsG0680031459.01.T01 AT1G76040 30.075 133 88 2 9 139 181 310 1.95e-11 60.5
MsG0680031459.01.T01 AT1G74740 30.534 131 89 2 10 139 368 497 2.70e-11 60.5
MsG0680031459.01.T01 AT1G76040 30.075 133 88 2 9 139 419 548 3.27e-11 60.1
MsG0680031459.01.T01 AT3G43810 26.606 109 79 1 33 140 3 111 3.72e-11 57.0
MsG0680031459.01.T01 AT3G43810 26.606 109 79 1 33 140 3 111 3.72e-11 57.0
MsG0680031459.01.T01 AT5G12180 29.545 132 88 2 10 139 382 510 4.85e-11 59.7
MsG0680031459.01.T01 AT4G23650 28.030 132 90 2 10 139 387 515 7.34e-11 58.9
MsG0680031459.01.T01 AT5G19360 28.788 132 89 2 10 139 377 505 9.33e-11 58.9

Find 43 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACCACTTTGATGAAAA+TGG 0.221308 6:-20755411 MsG0680031459.01.T01:CDS
ATTTCTCAATTTGACATTGA+TGG 0.261073 6:-20755087 MsG0680031459.01.T01:CDS
CGCCTCCTCGTTCGACATCT+TGG 0.273549 6:+20755335 None:intergenic
AGCATTCTCTTAAGACTCTT+TGG 0.286525 6:+20755156 None:intergenic
TAAGAGAATGCTTGGAAGAT+TGG 0.354871 6:-20755145 MsG0680031459.01.T01:CDS
GTCGAACGAGGAGGCGGAAA+TGG 0.371555 6:-20755328 MsG0680031459.01.T01:CDS
CGGCAATGTGTGGAGGCAAT+CGG 0.378283 6:-20755360 MsG0680031459.01.T01:CDS
CAATTTGACATTGATGGAGA+TGG 0.399838 6:-20755081 MsG0680031459.01.T01:CDS
GGCAATGTGTGGAGGCAATC+GGG 0.408198 6:-20755359 MsG0680031459.01.T01:CDS
GTTTGTAGAGGGAGGGAAAG+AGG 0.418412 6:-20755247 MsG0680031459.01.T01:CDS
AAGAGAATGCTTGGAAGATT+GGG 0.420123 6:-20755144 MsG0680031459.01.T01:CDS
TTCTCGACTCGGACGGGGAT+GGG 0.440025 6:-20755296 MsG0680031459.01.T01:CDS
TCGGACGGGGATGGGTTAGT+TGG 0.440699 6:-20755288 MsG0680031459.01.T01:CDS
TTGAGCTTCTCGACTCGGAC+GGG 0.442068 6:-20755302 MsG0680031459.01.T01:CDS
CGGGGATGGGTTAGTTGGGT+TGG 0.451530 6:-20755283 MsG0680031459.01.T01:CDS
CGGACGGGGATGGGTTAGTT+GGG 0.453908 6:-20755287 MsG0680031459.01.T01:CDS
AAGAGTCTTAAGAGAATGCT+TGG 0.464880 6:-20755153 MsG0680031459.01.T01:CDS
TTGTGAAGTTTGTAGAGGGA+GGG 0.474275 6:-20755254 MsG0680031459.01.T01:CDS
TCCTAAATTCATCAAAACTA+AGG 0.475085 6:+20755055 None:intergenic
CTTCTCGACTCGGACGGGGA+TGG 0.478951 6:-20755297 MsG0680031459.01.T01:CDS
AATTTGACATTGATGGAGAT+GGG 0.498825 6:-20755080 MsG0680031459.01.T01:CDS
TTTGTGAAGTTTGTAGAGGG+AGG 0.500405 6:-20755255 MsG0680031459.01.T01:CDS
ACATCTTAAAAGCTTCCCTT+AGG 0.513431 6:+20755208 None:intergenic
AAGAGAAAGTGAATGACCTA+AGG 0.518435 6:-20755224 MsG0680031459.01.T01:CDS
GGCGGTTGAGCTTCTCGACT+CGG 0.522065 6:-20755307 MsG0680031459.01.T01:CDS
CACTTTGATGAAAATGGAGA+TGG 0.524653 6:-20755405 MsG0680031459.01.T01:CDS
GTCGGAGCTGCGGCAATGTG+TGG 0.526902 6:-20755370 MsG0680031459.01.T01:CDS
CAAGATGTCGAACGAGGAGG+CGG 0.533170 6:-20755334 MsG0680031459.01.T01:CDS
TTTAAGATGTATGAAATGGA+GGG 0.540787 6:-20755195 MsG0680031459.01.T01:CDS
GTTGAGCTTCTCGACTCGGA+CGG 0.543058 6:-20755303 MsG0680031459.01.T01:CDS
TGAGCTTCTCGACTCGGACG+GGG 0.549367 6:-20755301 MsG0680031459.01.T01:CDS
AGAGAAAGTGAATGACCTAA+GGG 0.570683 6:-20755223 MsG0680031459.01.T01:CDS
ACACATTGCCGCAGCTCCGA+CGG 0.580783 6:+20755372 None:intergenic
TATAGATATGGTCATGGACA+AGG 0.584911 6:-20755454 None:intergenic
AAATATCACCGTCGGAGCTG+CGG 0.585133 6:-20755380 MsG0680031459.01.T01:CDS
ATGTATGAAATGGAGGGGTG+TGG 0.585987 6:-20755189 MsG0680031459.01.T01:CDS
TTAAGATGTATGAAATGGAG+GGG 0.595061 6:-20755194 MsG0680031459.01.T01:CDS
GAACGAGGAGGCGGAAATGG+CGG 0.597662 6:-20755325 MsG0680031459.01.T01:CDS
GCAATGTGTGGAGGCAATCG+GGG 0.601893 6:-20755358 MsG0680031459.01.T01:CDS
GGAGCTGCGGCAATGTGTGG+AGG 0.609680 6:-20755367 MsG0680031459.01.T01:CDS
ATTTGACATTGATGGAGATG+GGG 0.633515 6:-20755079 MsG0680031459.01.T01:CDS
CGGGGCCAAGATGTCGAACG+AGG 0.661203 6:-20755340 MsG0680031459.01.T01:CDS
GGCCAAGATGTCGAACGAGG+AGG 0.678288 6:-20755337 MsG0680031459.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATTTCTCAATTTGACATTGA+TGG - Chr6:20755395-20755414 MsG0680031459.01.T01:CDS 25.0%
! TCCTAAATTCATCAAAACTA+AGG + Chr6:20755430-20755449 None:intergenic 25.0%
!! TTTAAGATGTATGAAATGGA+GGG - Chr6:20755287-20755306 MsG0680031459.01.T01:CDS 25.0%
!!! AGCTTTTAAGATGTATGAAA+TGG - Chr6:20755283-20755302 MsG0680031459.01.T01:CDS 25.0%
!!! TCCTTAGTTTTGATGAATTT+AGG - Chr6:20755426-20755445 MsG0680031459.01.T01:CDS 25.0%
!!! TTTTAAGATGTATGAAATGG+AGG - Chr6:20755286-20755305 MsG0680031459.01.T01:CDS 25.0%
AATTTGACATTGATGGAGAT+GGG - Chr6:20755402-20755421 MsG0680031459.01.T01:CDS 30.0%
TTAAGATGTATGAAATGGAG+GGG - Chr6:20755288-20755307 MsG0680031459.01.T01:CDS 30.0%
TTCAACCACTTTGATGAAAA+TGG - Chr6:20755071-20755090 MsG0680031459.01.T01:CDS 30.0%
! GATTTTGTGAAGTTTGTAGA+GGG - Chr6:20755224-20755243 MsG0680031459.01.T01:CDS 30.0%
! TGATTTTGTGAAGTTTGTAG+AGG - Chr6:20755223-20755242 MsG0680031459.01.T01:CDS 30.0%
AAGAGAAAGTGAATGACCTA+AGG - Chr6:20755258-20755277 MsG0680031459.01.T01:CDS 35.0%
AAGAGAATGCTTGGAAGATT+GGG - Chr6:20755338-20755357 MsG0680031459.01.T01:CDS 35.0%
AAGAGTCTTAAGAGAATGCT+TGG - Chr6:20755329-20755348 MsG0680031459.01.T01:CDS 35.0%
ACATCTTAAAAGCTTCCCTT+AGG + Chr6:20755277-20755296 None:intergenic 35.0%
AGAGAAAGTGAATGACCTAA+GGG - Chr6:20755259-20755278 MsG0680031459.01.T01:CDS 35.0%
AGATGGAAAAATATCACCGT+CGG - Chr6:20755094-20755113 MsG0680031459.01.T01:CDS 35.0%
AGCATTCTCTTAAGACTCTT+TGG + Chr6:20755329-20755348 None:intergenic 35.0%
ATTTGACATTGATGGAGATG+GGG - Chr6:20755403-20755422 MsG0680031459.01.T01:CDS 35.0%
CAATTTGACATTGATGGAGA+TGG - Chr6:20755401-20755420 MsG0680031459.01.T01:CDS 35.0%
CACTTTGATGAAAATGGAGA+TGG - Chr6:20755077-20755096 MsG0680031459.01.T01:CDS 35.0%
TAAGAGAATGCTTGGAAGAT+TGG - Chr6:20755337-20755356 MsG0680031459.01.T01:CDS 35.0%
! CATCTCCATTTTCATCAAAG+TGG + Chr6:20755079-20755098 None:intergenic 35.0%
TTGTGAAGTTTGTAGAGGGA+GGG - Chr6:20755228-20755247 MsG0680031459.01.T01:CDS 40.0%
TTTGTGAAGTTTGTAGAGGG+AGG - Chr6:20755227-20755246 MsG0680031459.01.T01:CDS 40.0%
ATGTATGAAATGGAGGGGTG+TGG - Chr6:20755293-20755312 MsG0680031459.01.T01:CDS 45.0%
AAATATCACCGTCGGAGCTG+CGG - Chr6:20755102-20755121 MsG0680031459.01.T01:CDS 50.0%
GTTTGTAGAGGGAGGGAAAG+AGG - Chr6:20755235-20755254 MsG0680031459.01.T01:CDS 50.0%
CAAGATGTCGAACGAGGAGG+CGG - Chr6:20755148-20755167 MsG0680031459.01.T01:CDS 55.0%
CGGCAATGTGTGGAGGCAAT+CGG - Chr6:20755122-20755141 MsG0680031459.01.T01:CDS 55.0%
GCAATGTGTGGAGGCAATCG+GGG - Chr6:20755124-20755143 MsG0680031459.01.T01:CDS 55.0%
GGCAATGTGTGGAGGCAATC+GGG - Chr6:20755123-20755142 MsG0680031459.01.T01:CDS 55.0%
!! GTTGAGCTTCTCGACTCGGA+CGG - Chr6:20755179-20755198 MsG0680031459.01.T01:CDS 55.0%
!! TTGAGCTTCTCGACTCGGAC+GGG - Chr6:20755180-20755199 MsG0680031459.01.T01:CDS 55.0%
ACACATTGCCGCAGCTCCGA+CGG + Chr6:20755113-20755132 None:intergenic 60.0%
CGCCTCCTCGTTCGACATCT+TGG + Chr6:20755150-20755169 None:intergenic 60.0%
GAACGAGGAGGCGGAAATGG+CGG - Chr6:20755157-20755176 MsG0680031459.01.T01:CDS 60.0%
GGCCAAGATGTCGAACGAGG+AGG - Chr6:20755145-20755164 MsG0680031459.01.T01:CDS 60.0%
GGCGGTTGAGCTTCTCGACT+CGG - Chr6:20755175-20755194 MsG0680031459.01.T01:CDS 60.0%
GTCGAACGAGGAGGCGGAAA+TGG - Chr6:20755154-20755173 MsG0680031459.01.T01:CDS 60.0%
!! CGGACGGGGATGGGTTAGTT+GGG - Chr6:20755195-20755214 MsG0680031459.01.T01:CDS 60.0%
!! CGGGGATGGGTTAGTTGGGT+TGG - Chr6:20755199-20755218 MsG0680031459.01.T01:CDS 60.0%
!! TCGGACGGGGATGGGTTAGT+TGG - Chr6:20755194-20755213 MsG0680031459.01.T01:CDS 60.0%
!! TGAGCTTCTCGACTCGGACG+GGG - Chr6:20755181-20755200 MsG0680031459.01.T01:CDS 60.0%
!! TTCTCGACTCGGACGGGGAT+GGG - Chr6:20755186-20755205 MsG0680031459.01.T01:CDS 60.0%
CGGGGCCAAGATGTCGAACG+AGG - Chr6:20755142-20755161 MsG0680031459.01.T01:CDS 65.0%
GGAGCTGCGGCAATGTGTGG+AGG - Chr6:20755115-20755134 MsG0680031459.01.T01:CDS 65.0%
GTCGGAGCTGCGGCAATGTG+TGG - Chr6:20755112-20755131 MsG0680031459.01.T01:CDS 65.0%
!! CTTCTCGACTCGGACGGGGA+TGG - Chr6:20755185-20755204 MsG0680031459.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 20755041 20755463 20755041 ID=MsG0680031459.01;Name=MsG0680031459.01
Chr6 mRNA 20755041 20755463 20755041 ID=MsG0680031459.01.T01;Parent=MsG0680031459.01;Name=MsG0680031459.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|140
Chr6 exon 20755041 20755463 20755041 ID=MsG0680031459.01.T01:exon:13149;Parent=MsG0680031459.01.T01
Chr6 CDS 20755041 20755463 20755041 ID=MsG0680031459.01.T01:cds;Parent=MsG0680031459.01.T01
Gene Sequence

>MsG0680031459.01.T01

ATGGACAAGGTGACTCAATACATACGTGTGTTCAACCACTTTGATGAAAATGGAGATGGAAAAATATCACCGTCGGAGCTGCGGCAATGTGTGGAGGCAATCGGGGCCAAGATGTCGAACGAGGAGGCGGAAATGGCGGTTGAGCTTCTCGACTCGGACGGGGATGGGTTAGTTGGGTTGGATGATTTTGTGAAGTTTGTAGAGGGAGGGAAAGAGGAAGAGAAAGTGAATGACCTAAGGGAAGCTTTTAAGATGTATGAAATGGAGGGGTGTGGTTGCATCACACCAAAGAGTCTTAAGAGAATGCTTGGAAGATTGGGTGAGTGTAGAAGTGTAGATGAATGTCAAGCTATGATTTCTCAATTTGACATTGATGGAGATGGGGTCCTTAGTTTTGATGAATTTAGGACAATGATGCTTTAA

Protein sequence

>MsG0680031459.01.T01

MDKVTQYIRVFNHFDENGDGKISPSELRQCVEAIGAKMSNEEAEMAVELLDSDGDGLVGLDDFVKFVEGGKEEEKVNDLREAFKMYEMEGCGCITPKSLKRMLGRLGECRSVDECQAMISQFDIDGDGVLSFDEFRTMML*