AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024478.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024478.01.T01 MTR_5g011850 99.320 147 1 0 1 147 1 147 2.63e-105 297
MsG0580024478.01.T01 MTR_6g025320 51.007 149 71 1 1 147 1 149 4.19e-49 155
MsG0580024478.01.T01 MTR_7g087610 50.336 149 72 1 1 147 1 149 1.26e-48 154
MsG0580024478.01.T01 MTR_5g088320 50.336 149 72 1 1 147 1 149 2.02e-48 153
MsG0580024478.01.T01 MTR_1g041285 42.568 148 83 1 1 146 1 148 4.30e-40 132
MsG0580024478.01.T01 MTR_1g076650 40.541 148 86 1 1 146 1 148 8.14e-38 126
MsG0580024478.01.T01 MTR_0168s0120 48.673 113 56 1 37 147 1 113 9.01e-34 115
MsG0580024478.01.T01 MTR_6g025320 48.673 113 56 1 37 147 1 113 9.01e-34 115
MsG0580024478.01.T01 MTR_1g071150 36.054 147 91 2 1 145 1 146 6.13e-30 106
MsG0580024478.01.T01 MTR_8g066630 36.170 141 85 3 5 140 10 150 5.01e-25 94.4
MsG0580024478.01.T01 MTR_7g115040 36.486 148 92 1 1 146 1 148 1.53e-24 92.4
MsG0580024478.01.T01 MTR_1g032070 33.824 136 88 1 13 146 47 182 5.00e-20 82.0
MsG0580024478.01.T01 MTR_3g055570 37.931 145 69 3 1 141 41 168 4.60e-19 79.3
MsG0580024478.01.T01 MTR_8g105230 33.846 130 84 1 13 140 37 166 5.55e-19 79.3
MsG0580024478.01.T01 MTR_7g074020 30.282 142 97 1 5 144 23 164 5.80e-19 79.0
MsG0580024478.01.T01 MTR_4g112460 31.915 141 92 2 8 144 7 147 1.25e-18 77.8
MsG0580024478.01.T01 MTR_6g007613 31.343 134 90 1 13 144 30 163 3.13e-18 77.0
MsG0580024478.01.T01 MTR_7g106710 29.452 146 98 3 1 144 429 571 4.92e-18 80.1
MsG0580024478.01.T01 MTR_4g107490 32.192 146 96 2 1 144 367 511 5.98e-18 79.7
MsG0580024478.01.T01 MTR_1g096490 30.986 142 93 3 5 144 328 466 9.18e-18 79.0
MsG0580024478.01.T01 MTR_5g079340 33.566 143 85 4 7 145 2 138 1.40e-17 74.3
MsG0580024478.01.T01 MTR_1g055255 30.822 146 96 3 1 144 418 560 3.32e-17 77.4
MsG0580024478.01.T01 MTR_7g074020 30.233 129 88 1 5 131 23 151 9.33e-17 72.8
MsG0580024478.01.T01 MTR_8g107110 33.333 135 85 2 13 144 25 157 1.44e-16 72.4
MsG0580024478.01.T01 MTR_6g007613 30.233 129 88 1 5 131 22 150 5.17e-16 70.9
MsG0580024478.01.T01 MTR_8g069915 29.452 146 98 3 6 147 6 150 1.19e-15 70.1
MsG0580024478.01.T01 MTR_1g046950 30.657 137 91 2 13 145 5 141 1.96e-15 68.9
MsG0580024478.01.T01 MTR_7g068710 30.986 142 95 2 5 144 354 494 2.67e-15 72.0
MsG0580024478.01.T01 MTR_5g027000 28.889 135 94 1 8 140 18 152 2.77e-15 68.9
MsG0580024478.01.T01 MTR_6g079570 32.624 141 85 4 13 147 27 163 3.33e-15 68.9
MsG0580024478.01.T01 MTR_3g051770 32.237 152 94 3 1 144 377 527 4.38e-15 71.2
MsG0580024478.01.T01 MTR_1g047100 29.371 143 95 3 7 146 2 141 5.29e-15 67.8
MsG0580024478.01.T01 MTR_1g054865 29.452 146 98 3 1 144 455 597 7.54e-15 70.9
MsG0580024478.01.T01 MTR_1g041150 27.397 146 101 3 1 144 412 554 9.16e-15 70.5
MsG0580024478.01.T01 MTR_3g098070 28.169 142 97 3 5 144 327 465 1.54e-14 69.7
MsG0580024478.01.T01 MTR_4g132070 32.653 147 93 4 1 144 385 528 1.63e-14 69.7
MsG0580024478.01.T01 MTR_8g095440 28.873 142 96 3 5 144 328 466 1.84e-14 69.7
MsG0580024478.01.T01 MTR_3g098090 27.397 146 101 3 1 144 326 468 2.16e-14 69.3
MsG0580024478.01.T01 MTR_3g055520 34.752 141 79 3 1 141 41 168 2.19e-14 67.0
MsG0580024478.01.T01 MTR_5g099240 28.082 146 100 3 1 144 390 532 2.56e-14 69.3
MsG0580024478.01.T01 MTR_5g099240 28.082 146 100 3 1 144 318 460 2.76e-14 68.9
MsG0580024478.01.T01 MTR_5g092810 31.507 146 96 3 1 144 386 529 3.30e-14 68.9
MsG0580024478.01.T01 MTR_1g026190 30.822 146 97 3 1 144 376 519 4.61e-14 68.6
MsG0580024478.01.T01 MTR_3g067610 29.104 134 89 2 13 144 6 135 5.14e-14 65.1
MsG0580024478.01.T01 MTR_4g067270 30.435 138 92 2 11 144 4 141 1.50e-13 64.3
MsG0580024478.01.T01 MTR_1g052530 29.167 144 99 2 5 146 350 492 1.85e-13 66.6
MsG0580024478.01.T01 MTR_3g055585 33.333 141 81 3 1 141 41 168 6.65e-13 63.2
MsG0580024478.01.T01 MTR_5g009830 30.137 146 98 3 1 144 360 503 7.03e-13 65.1
MsG0580024478.01.T01 MTR_7g091890 29.054 148 102 2 1 146 352 498 9.91e-13 64.7
MsG0580024478.01.T01 MTR_7g075040 31.973 147 85 4 11 144 46 190 1.15e-12 62.8
MsG0580024478.01.T01 MTR_7g106710 27.692 130 89 3 1 128 429 555 1.34e-12 64.3
MsG0580024478.01.T01 MTR_8g036075 30.405 148 93 3 7 144 44 191 2.90e-12 61.6
MsG0580024478.01.T01 MTR_5g089320 28.873 142 97 3 5 144 366 505 3.08e-12 63.2
MsG0580024478.01.T01 MTR_0028s0170 30.282 142 95 3 5 144 376 515 3.09e-12 63.2
MsG0580024478.01.T01 MTR_8g099095 28.767 146 100 3 1 144 360 503 5.80e-12 62.4
MsG0580024478.01.T01 MTR_3g083470 31.538 130 81 2 11 140 92 213 6.02e-12 61.2
MsG0580024478.01.T01 MTR_4g103650 31.538 130 80 4 16 140 6 131 1.13e-11 58.9
MsG0580024478.01.T01 MTR_4g103655 31.538 130 80 4 16 140 10 135 1.56e-11 58.5
MsG0580024478.01.T01 MTR_3g055490 44.000 75 40 1 1 73 41 115 2.59e-11 57.4
MsG0580024478.01.T01 MTR_5g008705 26.923 130 93 1 19 146 1 130 3.48e-11 57.4
MsG0580024478.01.T01 MTR_4g115170 30.719 153 85 4 13 145 65 216 4.46e-11 58.9
MsG0580024478.01.T01 MTR_4g132040 29.452 146 98 4 1 144 390 532 7.67e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024478.01.T01 AT1G12310 87.838 148 17 1 1 147 1 148 5.68e-93 266
MsG0580024478.01.T01 AT1G62820 83.784 148 23 1 1 147 1 148 9.24e-90 258
MsG0580024478.01.T01 AT5G21274 51.007 149 71 1 1 147 1 149 4.34e-49 155
MsG0580024478.01.T01 AT3G43810 51.007 149 71 1 1 147 1 149 4.39e-49 155
MsG0580024478.01.T01 AT3G56800 50.336 149 72 1 1 147 1 149 1.51e-48 153
MsG0580024478.01.T01 AT2G27030 50.336 149 72 1 1 147 1 149 1.51e-48 153
MsG0580024478.01.T01 AT2G41110 50.336 149 72 1 1 147 1 149 1.51e-48 153
MsG0580024478.01.T01 AT2G27030 50.336 149 72 1 1 147 1 149 3.80e-48 153
MsG0580024478.01.T01 AT5G37780 50.336 149 72 1 1 147 1 149 4.17e-48 152
MsG0580024478.01.T01 AT1G66410 50.336 149 72 1 1 147 1 149 4.17e-48 152
MsG0580024478.01.T01 AT3G43810 50.336 149 72 1 1 147 1 149 3.64e-47 152
MsG0580024478.01.T01 AT2G41110 46.584 161 72 2 1 147 1 161 6.96e-45 144
MsG0580024478.01.T01 AT5G37780 45.732 164 72 2 1 147 1 164 6.97e-44 142
MsG0580024478.01.T01 AT5G37780 42.857 175 72 2 1 147 1 175 6.84e-42 137
MsG0580024478.01.T01 AT1G66410 47.170 159 72 2 1 147 1 159 9.88e-42 136
MsG0580024478.01.T01 AT3G22930 40.972 144 83 1 4 145 27 170 2.44e-38 128
MsG0580024478.01.T01 AT4G14640 40.559 143 83 1 5 145 6 148 3.55e-38 127
MsG0580024478.01.T01 AT5G37780 48.387 124 62 1 26 147 13 136 9.20e-37 123
MsG0580024478.01.T01 AT3G43810 48.673 113 56 1 37 147 1 113 9.44e-34 115
MsG0580024478.01.T01 AT3G43810 48.673 113 56 1 37 147 1 113 9.44e-34 115
MsG0580024478.01.T01 AT1G66410 48.673 113 56 1 37 147 1 113 2.03e-33 114
MsG0580024478.01.T01 AT1G66410 48.673 113 56 1 37 147 1 113 2.03e-33 114
MsG0580024478.01.T01 AT2G41100 38.554 166 83 3 1 147 55 220 1.48e-28 106
MsG0580024478.01.T01 AT2G41100 29.688 128 72 3 36 145 1 128 7.30e-12 61.6
MsG0580024478.01.T01 AT2G41100 38.554 166 83 3 1 147 55 220 1.48e-28 106
MsG0580024478.01.T01 AT2G41100 29.688 128 72 3 36 145 1 128 7.30e-12 61.6
MsG0580024478.01.T01 AT2G41100 38.554 166 83 3 1 147 55 220 1.48e-28 106
MsG0580024478.01.T01 AT2G41100 29.688 128 72 3 36 145 1 128 7.30e-12 61.6
MsG0580024478.01.T01 AT2G41100 38.554 166 83 3 1 147 90 255 2.65e-28 106
MsG0580024478.01.T01 AT2G41100 33.742 163 90 3 1 145 1 163 4.80e-24 95.1
MsG0580024478.01.T01 AT2G41100 38.554 166 83 3 1 147 90 255 2.65e-28 106
MsG0580024478.01.T01 AT2G41100 33.742 163 90 3 1 145 1 163 4.80e-24 95.1
MsG0580024478.01.T01 AT4G14640 36.885 122 75 1 26 145 9 130 4.37e-28 101
MsG0580024478.01.T01 AT2G41090 36.242 149 90 2 1 147 1 146 3.47e-25 95.5
MsG0580024478.01.T01 AT4G14640 42.718 103 57 1 5 105 6 108 1.17e-24 92.0
MsG0580024478.01.T01 AT3G22930 40.777 103 59 1 4 104 27 129 1.06e-22 87.4
MsG0580024478.01.T01 AT3G51920 31.081 148 100 1 1 146 1 148 8.33e-21 83.2
MsG0580024478.01.T01 AT1G32250 31.081 148 94 3 1 140 5 152 1.54e-20 82.8
MsG0580024478.01.T01 AT3G50360 30.282 142 97 1 5 144 20 161 1.15e-19 80.5
MsG0580024478.01.T01 AT4G37010 31.690 142 95 1 5 144 20 161 2.96e-19 79.3
MsG0580024478.01.T01 AT4G37010 31.690 142 95 1 5 144 24 165 3.24e-19 79.3
MsG0580024478.01.T01 AT1G24620 33.813 139 90 1 9 145 34 172 1.19e-18 78.6
MsG0580024478.01.T01 AT1G76040 32.877 146 94 3 1 144 167 310 4.90e-18 79.0
MsG0580024478.01.T01 AT1G76040 32.877 146 94 3 1 144 167 310 4.90e-18 79.0
MsG0580024478.01.T01 AT3G03000 33.103 145 94 2 5 146 13 157 7.27e-18 75.9
MsG0580024478.01.T01 AT1G76040 32.877 146 94 3 1 144 405 548 9.16e-18 79.3
MsG0580024478.01.T01 AT2G41100 36.923 130 63 3 37 147 1 130 1.20e-17 75.9
MsG0580024478.01.T01 AT1G18530 33.103 145 92 3 7 147 2 145 1.64e-17 74.7
MsG0580024478.01.T01 AT1G74740 34.228 149 93 4 1 146 353 499 2.11e-17 78.2
MsG0580024478.01.T01 AT1G35670 32.394 142 91 3 5 144 324 462 2.81e-17 77.8
MsG0580024478.01.T01 AT4G09570 31.690 142 92 3 5 144 323 461 9.40e-17 76.3
MsG0580024478.01.T01 AT1G66400 31.579 152 97 3 1 145 1 152 1.83e-16 72.0
MsG0580024478.01.T01 AT5G23580 29.452 146 98 3 1 144 316 458 1.27e-15 73.2
MsG0580024478.01.T01 AT4G38230 28.767 146 99 3 1 144 174 316 1.38e-15 72.4
MsG0580024478.01.T01 AT4G38230 28.767 146 99 3 1 144 318 460 1.40e-15 72.8
MsG0580024478.01.T01 AT4G38230 28.767 146 99 3 1 144 318 460 1.40e-15 72.8
MsG0580024478.01.T01 AT4G38230 28.767 146 99 3 1 144 348 490 1.54e-15 72.8
MsG0580024478.01.T01 AT4G21940 32.192 146 95 3 1 144 395 538 7.05e-15 70.9
MsG0580024478.01.T01 AT4G21940 32.192 146 95 3 1 144 395 538 7.79e-15 70.9
MsG0580024478.01.T01 AT2G17290 28.082 146 100 3 1 144 379 521 8.12e-15 70.9
MsG0580024478.01.T01 AT2G17290 28.082 146 100 3 1 144 379 521 8.12e-15 70.9
MsG0580024478.01.T01 AT3G10660 28.767 146 99 3 1 144 480 622 9.13e-15 70.5
MsG0580024478.01.T01 AT3G10660 28.767 146 99 3 1 144 480 622 9.13e-15 70.5
MsG0580024478.01.T01 AT1G18210 29.323 133 92 1 13 145 24 154 1.63e-14 67.4
MsG0580024478.01.T01 AT1G18210 29.323 133 92 1 13 145 24 154 1.63e-14 67.4
MsG0580024478.01.T01 AT4G35310 28.767 146 99 3 1 144 391 533 2.27e-14 69.3
MsG0580024478.01.T01 AT4G35310 28.767 146 99 3 1 144 391 533 2.27e-14 69.3
MsG0580024478.01.T01 AT5G04870 27.397 146 101 3 1 144 444 586 4.36e-14 68.6
MsG0580024478.01.T01 AT3G57530 31.333 150 91 4 1 144 357 500 6.10e-14 68.2
MsG0580024478.01.T01 AT2G38910 28.767 146 99 3 1 144 428 570 1.58e-13 67.0
MsG0580024478.01.T01 AT3G20410 29.452 146 99 3 1 144 385 528 1.85e-13 67.0
MsG0580024478.01.T01 AT3G20410 29.452 146 99 3 1 144 385 528 1.85e-13 67.0
MsG0580024478.01.T01 AT2G41860 30.137 146 99 2 1 144 348 492 2.11e-13 66.6
MsG0580024478.01.T01 AT2G41860 30.137 146 99 2 1 144 348 492 2.21e-13 66.6
MsG0580024478.01.T01 AT1G05990 30.216 139 92 3 11 144 4 142 2.25e-13 63.9
MsG0580024478.01.T01 AT4G23650 29.452 146 99 3 1 144 372 515 4.70e-13 65.5
MsG0580024478.01.T01 AT2G43290 29.861 144 90 4 11 144 64 206 4.91e-13 64.3
MsG0580024478.01.T01 AT3G25600 29.167 144 97 3 8 147 8 150 6.49e-13 62.8
MsG0580024478.01.T01 AT2G15680 27.465 142 99 2 5 144 43 182 6.72e-13 63.2
MsG0580024478.01.T01 AT3G59440 31.884 138 85 4 13 144 52 186 9.37e-13 63.2
MsG0580024478.01.T01 AT4G03290 29.927 137 89 3 11 140 4 140 1.75e-12 61.6
MsG0580024478.01.T01 AT5G19360 30.282 142 95 3 5 144 366 505 1.86e-12 63.9
MsG0580024478.01.T01 AT1G73630 26.866 134 92 2 13 144 21 150 2.78e-12 61.2
MsG0580024478.01.T01 AT1G18890 28.859 149 101 4 1 146 357 503 2.84e-12 63.5
MsG0580024478.01.T01 AT5G12480 28.289 152 99 4 1 146 353 500 3.30e-12 63.2
MsG0580024478.01.T01 AT5G12480 28.289 152 99 4 1 146 259 406 4.06e-12 62.8
MsG0580024478.01.T01 AT1G50700 28.082 146 101 3 1 144 367 510 4.30e-12 62.8
MsG0580024478.01.T01 AT4G04720 29.452 146 99 3 1 144 373 516 9.70e-12 62.0
MsG0580024478.01.T01 AT4G04720 29.452 146 99 3 1 144 373 516 9.70e-12 62.0
MsG0580024478.01.T01 AT3G03400 29.231 130 88 3 12 137 5 134 1.33e-11 58.9
MsG0580024478.01.T01 AT3G51850 28.873 142 98 2 5 144 352 492 1.98e-11 60.8
MsG0580024478.01.T01 AT5G12180 28.873 142 97 3 5 144 371 510 2.99e-11 60.5
MsG0580024478.01.T01 AT2G41100 36.923 65 41 0 83 147 12 76 4.60e-11 57.8
MsG0580024478.01.T01 AT4G12860 28.986 138 90 3 13 144 6 141 5.52e-11 57.4
MsG0580024478.01.T01 AT5G37770 26.087 138 96 2 13 144 18 155 6.80e-11 57.4
MsG0580024478.01.T01 AT5G37770 26.087 138 96 2 13 144 18 155 6.80e-11 57.4

Find 35 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGACGATCGAACGGTTC+AGG 0.312022 5:-5430694 None:intergenic
CGATGGATTTGAGTTGGGCT+TGG 0.312614 5:-5430600 None:intergenic
CGGTTCAGGTTTCATGTGTT+TGG 0.324663 5:-5430680 None:intergenic
CTGAGTTTGATGAATGGATT+AGG 0.334899 5:+5430818 MsG0580024478.01.T01:CDS
CGGCGACGATGGATTTGAGT+TGG 0.406400 5:-5430606 None:intergenic
ATTTGAGTTGGGCTTGGGTC+GGG 0.416027 5:-5430594 None:intergenic
GATGGATTTGAGTTGGGCTT+GGG 0.428812 5:-5430599 None:intergenic
GATTTGAGTTGGGCTTGGGT+CGG 0.446248 5:-5430595 None:intergenic
GGCGACGATGGATTTGAGTT+GGG 0.459012 5:-5430605 None:intergenic
AACCGTTCGATCGTCAACTA+AGG 0.463624 5:+5430698 MsG0580024478.01.T01:CDS
GTTCTCGATAAAGATGCTAC+TGG 0.465422 5:+5430733 MsG0580024478.01.T01:CDS
GGATTAGGGAAGTTGATGTT+GGG 0.471509 5:+5430833 MsG0580024478.01.T01:CDS
AGCCTGCTGAGTTTGATGAA+TGG 0.478011 5:+5430812 MsG0580024478.01.T01:CDS
GAAGTTGATGTTGGGTCTGA+TGG 0.478332 5:+5430841 MsG0580024478.01.T01:CDS
TGAGTTTGATGAATGGATTA+GGG 0.481850 5:+5430819 MsG0580024478.01.T01:CDS
TGAAGATTTCATCGCTAGAA+TGG 0.494928 5:+5430876 MsG0580024478.01.T01:CDS
TGGATTAGGGAAGTTGATGT+TGG 0.508553 5:+5430832 MsG0580024478.01.T01:CDS
AGGGGAGGTTAGATTCTCTT+CGG 0.513129 5:-5430626 None:intergenic
ATCCATTCATCAAACTCAGC+AGG 0.514616 5:-5430814 None:intergenic
TAGATTCTCTTCGGCGACGA+TGG 0.518627 5:-5430617 None:intergenic
GGAATCCTCATGCGTTCTCT+CGG 0.535690 5:+5430565 MsG0580024478.01.T01:CDS
AAATCAAACGAAAATGGGTA+AGG 0.546646 5:+5430453 None:intergenic
AAGTTGATGTTGGGTCTGAT+GGG 0.550763 5:+5430842 MsG0580024478.01.T01:CDS
CGACGGCAAGATCGCACCAT+CGG 0.559292 5:+5430537 MsG0580024478.01.T01:CDS
GAAATCGAGAGAAATCGAAA+GGG 0.564111 5:-5430645 None:intergenic
AAGATCGCACCATCGGAGCT+CGG 0.573545 5:+5430544 MsG0580024478.01.T01:CDS
AGAAATCGAGAGAAATCGAA+AGG 0.584540 5:-5430646 None:intergenic
ATGAGGATTCCGAGCTCCGA+TGG 0.601818 5:-5430553 None:intergenic
ACCGTTCGATCGTCAACTAA+GGG 0.604940 5:+5430699 MsG0580024478.01.T01:CDS
TCCCTTAGTTGACGATCGAA+CGG 0.606994 5:-5430700 None:intergenic
ATCCTCATGCGTTCTCTCGG+CGG 0.614038 5:+5430568 MsG0580024478.01.T01:CDS
TACCGCCGAGAGAACGCATG+AGG 0.654227 5:-5430570 None:intergenic
TCGAGAGAAATCGAAAGGGG+AGG 0.668937 5:-5430641 None:intergenic
AAATCGAGAGAAATCGAAAG+GGG 0.678072 5:-5430644 None:intergenic
CTCTTCGACACAGACAACGA+CGG 0.710491 5:+5430520 MsG0580024478.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAGTTTGATGAATGGATTA+GGG + Chr5:5430819-5430838 MsG0580024478.01.T01:CDS 30.0%
AAATCGAGAGAAATCGAAAG+GGG - Chr5:5430647-5430666 None:intergenic 35.0%
AGAAATCGAGAGAAATCGAA+AGG - Chr5:5430649-5430668 None:intergenic 35.0%
GAAATCGAGAGAAATCGAAA+GGG - Chr5:5430648-5430667 None:intergenic 35.0%
TGAAGATTTCATCGCTAGAA+TGG + Chr5:5430876-5430895 MsG0580024478.01.T01:CDS 35.0%
! CTGAGTTTGATGAATGGATT+AGG + Chr5:5430818-5430837 MsG0580024478.01.T01:CDS 35.0%
!!! CGTCATATTTTGACGAGTAT+TGG + Chr5:5430778-5430797 MsG0580024478.01.T01:CDS 35.0%
ATCCATTCATCAAACTCAGC+AGG - Chr5:5430817-5430836 None:intergenic 40.0%
GTTCTCGATAAAGATGCTAC+TGG + Chr5:5430733-5430752 MsG0580024478.01.T01:CDS 40.0%
!! AAGTTGATGTTGGGTCTGAT+GGG + Chr5:5430842-5430861 MsG0580024478.01.T01:CDS 40.0%
!! GGATTAGGGAAGTTGATGTT+GGG + Chr5:5430833-5430852 MsG0580024478.01.T01:CDS 40.0%
!! TGGATTAGGGAAGTTGATGT+TGG + Chr5:5430832-5430851 MsG0580024478.01.T01:CDS 40.0%
AACCGTTCGATCGTCAACTA+AGG + Chr5:5430698-5430717 MsG0580024478.01.T01:CDS 45.0%
ACCGTTCGATCGTCAACTAA+GGG + Chr5:5430699-5430718 MsG0580024478.01.T01:CDS 45.0%
AGCCTGCTGAGTTTGATGAA+TGG + Chr5:5430812-5430831 MsG0580024478.01.T01:CDS 45.0%
AGGGGAGGTTAGATTCTCTT+CGG - Chr5:5430629-5430648 None:intergenic 45.0%
TCCCTTAGTTGACGATCGAA+CGG - Chr5:5430703-5430722 None:intergenic 45.0%
! CGGTTCAGGTTTCATGTGTT+TGG - Chr5:5430683-5430702 None:intergenic 45.0%
!! GAAGTTGATGTTGGGTCTGA+TGG + Chr5:5430841-5430860 MsG0580024478.01.T01:CDS 45.0%
!! GATGGATTTGAGTTGGGCTT+GGG - Chr5:5430602-5430621 None:intergenic 45.0%
AGTTGACGATCGAACGGTTC+AGG - Chr5:5430697-5430716 None:intergenic 50.0%
CTCTTCGACACAGACAACGA+CGG + Chr5:5430520-5430539 MsG0580024478.01.T01:CDS 50.0%
GGAATCCTCATGCGTTCTCT+CGG + Chr5:5430565-5430584 MsG0580024478.01.T01:CDS 50.0%
TAGATTCTCTTCGGCGACGA+TGG - Chr5:5430620-5430639 None:intergenic 50.0%
TCGAGAGAAATCGAAAGGGG+AGG - Chr5:5430644-5430663 None:intergenic 50.0%
! GGCGACGATGGATTTGAGTT+GGG - Chr5:5430608-5430627 None:intergenic 50.0%
!! ATTTGAGTTGGGCTTGGGTC+GGG - Chr5:5430597-5430616 None:intergenic 50.0%
!! CGATGGATTTGAGTTGGGCT+TGG - Chr5:5430603-5430622 None:intergenic 50.0%
!! GATTTGAGTTGGGCTTGGGT+CGG - Chr5:5430598-5430617 None:intergenic 50.0%
AAGATCGCACCATCGGAGCT+CGG + Chr5:5430544-5430563 MsG0580024478.01.T01:CDS 55.0%
ATCCTCATGCGTTCTCTCGG+CGG + Chr5:5430568-5430587 MsG0580024478.01.T01:CDS 55.0%
ATGAGGATTCCGAGCTCCGA+TGG - Chr5:5430556-5430575 None:intergenic 55.0%
! CGGCGACGATGGATTTGAGT+TGG - Chr5:5430609-5430628 None:intergenic 55.0%
CGACGGCAAGATCGCACCAT+CGG + Chr5:5430537-5430556 MsG0580024478.01.T01:CDS 60.0%
TACCGCCGAGAGAACGCATG+AGG - Chr5:5430573-5430592 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 5430466 5430909 5430466 ID=MsG0580024478.01;Name=MsG0580024478.01
Chr5 mRNA 5430466 5430909 5430466 ID=MsG0580024478.01.T01;Parent=MsG0580024478.01;Name=MsG0580024478.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|147
Chr5 exon 5430466 5430909 5430466 ID=MsG0580024478.01.T01:exon:25620;Parent=MsG0580024478.01.T01
Chr5 CDS 5430466 5430909 5430466 ID=MsG0580024478.01.T01:cds;Parent=MsG0580024478.01.T01
Gene Sequence

>MsG0580024478.01.T01

ATGGGTAAGGATCTGAGCGACGATCAAATCTCATCAATGAAAGAAGCATTCACACTCTTCGACACAGACAACGACGGCAAGATCGCACCATCGGAGCTCGGAATCCTCATGCGTTCTCTCGGCGGTAACCCGACCCAAGCCCAACTCAAATCCATCGTCGCCGAAGAGAATCTAACCTCCCCTTTCGATTTCTCTCGATTTCTCGATCTCATGTCCAAACACATGAAACCTGAACCGTTCGATCGTCAACTAAGGGATGCGTTCAAAGTTCTCGATAAAGATGCTACTGGATTTGTTTCTGTCAATGAGCTTCGTCATATTTTGACGAGTATTGGTGAGAAGCTTGAGCCTGCTGAGTTTGATGAATGGATTAGGGAAGTTGATGTTGGGTCTGATGGGAAGATTCGTTATGAAGATTTCATCGCTAGAATGGTTGCGAAGTGA

Protein sequence

>MsG0580024478.01.T01

MGKDLSDDQISSMKEAFTLFDTDNDGKIAPSELGILMRSLGGNPTQAQLKSIVAEENLTSPFDFSRFLDLMSKHMKPEPFDRQLRDAFKVLDKDATGFVSVNELRHILTSIGEKLEPAEFDEWIREVDVGSDGKIRYEDFIARMVAK*