AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024305.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024305.01.T01 MTR_1g046950 71.831 142 39 1 14 154 1 142 4.42e-64 192
MsG0580024305.01.T01 MTR_5g079340 72.857 140 36 1 14 153 1 138 2.03e-63 191
MsG0580024305.01.T01 MTR_1g047100 70.714 140 41 0 14 153 1 140 1.21e-62 189
MsG0580024305.01.T01 MTR_3g067610 63.571 140 46 2 15 154 3 137 2.23e-56 173
MsG0580024305.01.T01 MTR_5g008705 71.318 129 36 1 25 153 2 129 1.27e-55 171
MsG0580024305.01.T01 MTR_5g008695 75.652 115 27 1 41 154 1 115 9.55e-51 158
MsG0580024305.01.T01 MTR_8g107110 51.095 137 65 1 16 152 23 157 4.08e-37 125
MsG0580024305.01.T01 MTR_6g079570 47.482 139 70 2 16 153 25 161 9.62e-34 117
MsG0580024305.01.T01 MTR_1g032070 43.609 133 74 1 20 152 49 180 7.01e-30 107
MsG0580024305.01.T01 MTR_8g105230 40.602 133 78 1 17 149 36 167 3.49e-27 100
MsG0580024305.01.T01 MTR_7g089760 41.304 138 78 2 17 152 5 141 2.62e-26 97.4
MsG0580024305.01.T01 MTR_6g023460 37.594 133 81 1 20 152 11 141 3.96e-26 96.7
MsG0580024305.01.T01 MTR_4g067270 38.129 139 83 2 16 152 4 141 8.89e-26 95.9
MsG0580024305.01.T01 MTR_7g075040 40.523 153 77 4 11 152 41 190 2.89e-25 95.9
MsG0580024305.01.T01 MTR_8g036075 45.714 140 67 4 21 152 53 191 9.15e-25 94.7
MsG0580024305.01.T01 MTR_5g088320 37.500 136 84 1 17 152 12 146 2.23e-22 87.4
MsG0580024305.01.T01 MTR_6g025320 37.500 136 84 1 17 152 12 146 2.95e-22 87.0
MsG0580024305.01.T01 MTR_7g087610 36.765 136 85 1 17 152 12 146 3.62e-22 86.7
MsG0580024305.01.T01 MTR_1g041285 35.294 136 87 1 17 152 12 146 7.06e-21 83.6
MsG0580024305.01.T01 MTR_3g089090 34.586 133 85 1 20 152 8 138 1.28e-20 82.4
MsG0580024305.01.T01 MTR_3g089070 34.586 133 85 1 20 152 9 139 1.34e-20 82.4
MsG0580024305.01.T01 MTR_1g076650 35.878 131 83 1 22 152 17 146 1.36e-20 82.8
MsG0580024305.01.T01 MTR_4g086260 38.129 139 83 2 16 154 56 191 1.93e-20 83.6
MsG0580024305.01.T01 MTR_5g017510 39.286 140 78 4 16 152 47 182 3.05e-20 82.8
MsG0580024305.01.T01 MTR_5g017560 39.286 140 78 4 16 152 47 182 3.05e-20 82.8
MsG0580024305.01.T01 MTR_4g112460 28.571 140 99 1 16 154 10 149 7.77e-20 81.3
MsG0580024305.01.T01 MTR_4g115170 35.503 169 91 4 1 152 49 216 6.30e-19 80.1
MsG0580024305.01.T01 MTR_5g017550 35.766 137 86 1 16 152 47 181 1.85e-18 78.2
MsG0580024305.01.T01 MTR_8g066630 28.986 138 96 1 17 152 17 154 2.18e-18 77.4
MsG0580024305.01.T01 MTR_1g046960 62.712 59 22 0 41 99 1 59 6.35e-18 74.3
MsG0580024305.01.T01 MTR_0168s0120 37.838 111 68 1 42 152 1 110 7.54e-18 74.7
MsG0580024305.01.T01 MTR_6g025320 37.838 111 68 1 42 152 1 110 7.54e-18 74.7
MsG0580024305.01.T01 MTR_7g074240 37.063 143 79 3 21 152 28 170 1.41e-17 75.5
MsG0580024305.01.T01 MTR_4g103650 33.824 136 88 1 17 152 2 135 1.78e-17 74.3
MsG0580024305.01.T01 MTR_8g078270 34.074 135 84 3 21 153 57 188 5.87e-17 74.3
MsG0580024305.01.T01 MTR_4g103630 33.333 138 90 1 15 152 4 139 8.65e-17 72.4
MsG0580024305.01.T01 MTR_4g103655 33.333 138 90 1 15 152 4 139 8.83e-17 72.4
MsG0580024305.01.T01 MTR_1g071150 31.618 136 91 1 17 152 12 145 1.48e-16 72.0
MsG0580024305.01.T01 MTR_2g098890 34.286 140 89 2 16 152 63 202 1.75e-16 73.6
MsG0580024305.01.T01 MTR_8g099095 34.532 139 78 4 21 154 375 505 2.31e-15 72.4
MsG0580024305.01.T01 MTR_5g009830 35.252 139 77 4 21 154 375 505 2.48e-15 72.4
MsG0580024305.01.T01 MTR_5g079470 54.688 64 28 1 20 83 13 75 1.20e-14 65.5
MsG0580024305.01.T01 MTR_7g090450 30.714 140 93 3 17 152 73 212 1.27e-14 68.6
MsG0580024305.01.T01 MTR_5g092810 35.036 137 76 4 21 152 401 529 1.58e-14 70.1
MsG0580024305.01.T01 MTR_3g083470 31.655 139 84 2 14 152 90 217 1.71e-14 68.6
MsG0580024305.01.T01 MTR_8g069915 28.058 139 99 1 17 154 12 150 2.43e-14 67.0
MsG0580024305.01.T01 MTR_3g051770 34.783 138 82 2 21 152 392 527 3.22e-14 69.3
MsG0580024305.01.T01 MTR_4g132070 33.582 134 82 3 21 152 400 528 3.94e-14 68.9
MsG0580024305.01.T01 MTR_7g115040 30.147 136 94 1 17 152 12 146 1.10e-13 64.7
MsG0580024305.01.T01 MTR_6g007613 29.710 138 96 1 17 154 29 165 1.71e-13 64.7
MsG0580024305.01.T01 MTR_7g074020 28.676 136 96 1 17 152 30 164 5.82e-13 63.2
MsG0580024305.01.T01 MTR_5g089320 30.657 137 88 3 20 154 376 507 8.79e-13 65.1
MsG0580024305.01.T01 MTR_1g026190 31.884 138 85 3 20 154 390 521 3.46e-12 63.5
MsG0580024305.01.T01 MTR_1g030440 32.624 141 80 3 21 152 26 160 5.76e-12 60.5
MsG0580024305.01.T01 MTR_5g011850 29.851 134 90 3 22 154 17 147 1.71e-11 58.9
MsG0580024305.01.T01 MTR_7g068710 32.877 146 93 3 10 152 351 494 3.54e-11 60.5
MsG0580024305.01.T01 MTR_0028s0170 30.216 139 84 4 21 154 387 517 4.18e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024305.01.T01 AT1G18210 48.592 142 68 2 11 152 17 153 3.22e-38 128
MsG0580024305.01.T01 AT1G18210 48.592 142 68 2 11 152 17 153 3.22e-38 128
MsG0580024305.01.T01 AT1G73630 43.624 149 79 2 5 153 8 151 2.00e-35 121
MsG0580024305.01.T01 AT5G37770 46.528 144 74 2 13 153 13 156 3.62e-34 117
MsG0580024305.01.T01 AT5G37770 46.528 144 74 2 13 153 13 156 3.62e-34 117
MsG0580024305.01.T01 AT1G66400 44.681 141 77 1 13 152 11 151 1.18e-32 114
MsG0580024305.01.T01 AT5G17470 43.165 139 74 2 18 153 3 139 5.77e-32 111
MsG0580024305.01.T01 AT2G36180 43.885 139 72 2 18 152 1 137 1.24e-29 105
MsG0580024305.01.T01 AT1G24620 41.606 137 79 1 17 153 37 172 2.10e-28 103
MsG0580024305.01.T01 AT3G07490 42.029 138 77 2 17 152 5 141 4.11e-27 99.8
MsG0580024305.01.T01 AT1G05990 39.130 138 82 1 17 152 5 142 1.01e-25 95.9
MsG0580024305.01.T01 AT2G15680 39.130 138 81 1 16 153 49 183 9.07e-25 94.4
MsG0580024305.01.T01 AT4G03290 35.915 142 87 2 17 154 5 146 7.27e-23 88.6
MsG0580024305.01.T01 AT5G37780 37.500 136 84 1 17 152 12 146 1.16e-22 88.2
MsG0580024305.01.T01 AT1G66410 37.500 136 84 1 17 152 12 146 1.16e-22 88.2
MsG0580024305.01.T01 AT5G21274 38.235 136 83 1 17 152 12 146 1.35e-22 87.8
MsG0580024305.01.T01 AT3G03400 37.313 134 79 2 15 145 3 134 1.40e-22 87.4
MsG0580024305.01.T01 AT4G12860 37.681 138 83 2 17 152 5 141 2.44e-22 87.4
MsG0580024305.01.T01 AT3G56800 37.500 136 84 1 17 152 12 146 2.96e-22 87.0
MsG0580024305.01.T01 AT2G27030 37.500 136 84 1 17 152 12 146 2.96e-22 87.0
MsG0580024305.01.T01 AT2G41110 37.500 136 84 1 17 152 12 146 2.96e-22 87.0
MsG0580024305.01.T01 AT3G43810 37.500 136 84 1 17 152 12 146 3.09e-22 87.0
MsG0580024305.01.T01 AT2G27030 37.500 136 84 1 17 152 12 146 5.68e-22 87.0
MsG0580024305.01.T01 AT3G43810 38.168 131 80 1 22 152 17 146 9.79e-22 87.4
MsG0580024305.01.T01 AT2G43290 35.915 142 85 2 17 152 65 206 1.43e-21 87.0
MsG0580024305.01.T01 AT3G10190 39.130 138 80 3 17 152 70 205 3.09e-21 85.9
MsG0580024305.01.T01 AT4G37010 33.557 149 90 3 12 154 22 167 5.05e-20 81.6
MsG0580024305.01.T01 AT4G37010 33.557 149 90 3 12 154 18 163 5.41e-20 81.6
MsG0580024305.01.T01 AT3G59440 35.821 134 82 2 21 152 55 186 1.82e-19 80.9
MsG0580024305.01.T01 AT3G50360 32.609 138 92 1 17 154 27 163 1.95e-19 80.1
MsG0580024305.01.T01 AT2G41110 35.811 148 82 3 17 152 12 158 2.39e-19 79.7
MsG0580024305.01.T01 AT3G22930 35.115 131 84 1 22 152 40 169 3.42e-19 79.7
MsG0580024305.01.T01 AT1G32250 28.873 142 96 1 16 152 15 156 1.13e-18 78.2
MsG0580024305.01.T01 AT5G37780 34.247 146 80 2 22 152 17 161 1.18e-18 78.2
MsG0580024305.01.T01 AT1G66410 37.838 111 68 1 42 152 1 110 2.84e-18 75.9
MsG0580024305.01.T01 AT1G66410 37.838 111 68 1 42 152 1 110 2.84e-18 75.9
MsG0580024305.01.T01 AT5G37780 36.066 122 77 1 31 152 13 133 3.82e-18 75.9
MsG0580024305.01.T01 AT1G66410 36.066 122 77 1 31 152 36 156 5.88e-18 76.3
MsG0580024305.01.T01 AT3G43810 37.838 111 68 1 42 152 1 110 7.89e-18 74.7
MsG0580024305.01.T01 AT3G43810 37.838 111 68 1 42 152 1 110 7.89e-18 74.7
MsG0580024305.01.T01 AT4G14640 33.588 131 86 1 22 152 18 147 1.02e-17 75.5
MsG0580024305.01.T01 AT1G76650 34.783 138 88 1 15 152 41 176 1.03e-17 75.9
MsG0580024305.01.T01 AT1G76650 34.783 138 88 1 15 152 41 176 1.03e-17 75.9
MsG0580024305.01.T01 AT5G37780 36.066 122 77 1 31 152 52 172 1.16e-17 75.9
MsG0580024305.01.T01 AT2G41410 31.169 154 102 3 2 153 57 208 3.16e-17 75.5
MsG0580024305.01.T01 AT5G42380 32.847 137 92 0 16 152 48 184 4.09e-17 74.7
MsG0580024305.01.T01 AT1G18530 28.058 139 99 1 17 154 7 145 4.40e-17 73.9
MsG0580024305.01.T01 AT3G50770 30.282 142 95 3 16 153 63 204 9.47e-17 73.9
MsG0580024305.01.T01 AT1G76650 34.783 138 78 2 15 152 41 166 4.28e-16 71.6
MsG0580024305.01.T01 AT2G41100 33.108 148 84 2 22 154 17 164 4.77e-16 73.9
MsG0580024305.01.T01 AT2G41100 31.757 148 85 2 22 153 106 253 1.30e-14 69.7
MsG0580024305.01.T01 AT2G41100 33.108 148 84 2 22 154 17 164 4.77e-16 73.9
MsG0580024305.01.T01 AT2G41100 31.757 148 85 2 22 153 106 253 1.30e-14 69.7
MsG0580024305.01.T01 AT4G23650 33.813 139 79 4 21 154 387 517 4.82e-16 74.3
MsG0580024305.01.T01 AT4G04695 35.507 138 76 4 20 152 339 468 6.96e-16 73.9
MsG0580024305.01.T01 AT4G20780 32.450 151 83 2 21 152 33 183 2.36e-15 70.1
MsG0580024305.01.T01 AT2G41100 31.757 148 85 2 22 153 71 218 9.17e-15 70.1
MsG0580024305.01.T01 AT2G41100 31.008 129 74 2 41 154 1 129 6.30e-11 59.3
MsG0580024305.01.T01 AT2G41100 31.757 148 85 2 22 153 71 218 9.17e-15 70.1
MsG0580024305.01.T01 AT2G41100 31.008 129 74 2 41 154 1 129 6.30e-11 59.3
MsG0580024305.01.T01 AT2G41100 31.757 148 85 2 22 153 71 218 9.17e-15 70.1
MsG0580024305.01.T01 AT2G41100 31.008 129 74 2 41 154 1 129 6.30e-11 59.3
MsG0580024305.01.T01 AT5G17480 55.556 63 27 1 21 83 13 74 1.16e-14 65.5
MsG0580024305.01.T01 AT2G41090 34.351 131 82 2 22 152 17 143 1.46e-14 68.2
MsG0580024305.01.T01 AT4G04700 34.074 135 82 3 20 152 339 468 2.01e-14 69.7
MsG0580024305.01.T01 AT3G03410 30.303 132 82 2 21 152 6 127 4.10e-14 65.5
MsG0580024305.01.T01 AT3G03000 30.147 136 95 0 17 152 20 155 4.39e-14 66.2
MsG0580024305.01.T01 AT3G25600 27.338 139 100 1 17 154 12 150 4.60e-14 65.9
MsG0580024305.01.T01 AT4G14640 31.148 122 83 1 31 152 9 129 9.51e-14 64.7
MsG0580024305.01.T01 AT1G61950 35.294 136 79 3 20 152 407 536 1.76e-13 67.0
MsG0580024305.01.T01 AT1G76640 31.655 139 94 1 15 152 20 158 2.13e-13 64.3
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT4G04740 35.507 138 76 4 20 152 376 505 2.79e-13 66.6
MsG0580024305.01.T01 AT3G20410 35.766 137 75 4 21 152 400 528 3.90e-13 66.2
MsG0580024305.01.T01 AT3G20410 35.766 137 75 4 21 152 400 528 3.90e-13 66.2
MsG0580024305.01.T01 AT3G03430 50.794 63 30 1 21 83 13 74 6.01e-13 61.2
MsG0580024305.01.T01 AT4G04720 34.783 138 77 4 20 152 387 516 6.79e-13 65.5
MsG0580024305.01.T01 AT4G04720 34.783 138 77 4 20 152 387 516 6.79e-13 65.5
MsG0580024305.01.T01 AT4G21940 34.783 138 77 4 20 152 409 538 8.01e-13 65.1
MsG0580024305.01.T01 AT4G21940 34.783 138 77 4 20 152 409 538 9.14e-13 65.1
MsG0580024305.01.T01 AT5G19360 32.353 136 85 3 21 154 377 507 1.16e-12 64.7
MsG0580024305.01.T01 AT3G01830 32.857 140 87 5 16 152 10 145 1.28e-12 62.0
MsG0580024305.01.T01 AT1G50700 33.577 137 78 4 21 152 382 510 2.60e-12 63.9
MsG0580024305.01.T01 AT1G62820 29.167 144 95 4 15 154 8 148 6.07e-12 60.1
MsG0580024305.01.T01 AT5G12180 31.618 136 86 3 21 154 382 512 6.45e-12 62.8
MsG0580024305.01.T01 AT3G51850 32.090 134 85 2 21 152 363 492 1.52e-11 61.6
MsG0580024305.01.T01 AT5G04870 29.927 137 86 4 21 154 459 588 1.95e-11 61.2
MsG0580024305.01.T01 AT5G44460 32.639 144 84 3 21 152 32 174 2.56e-11 59.3
MsG0580024305.01.T01 AT1G74740 35.294 136 80 5 20 152 367 497 2.59e-11 60.8
MsG0580024305.01.T01 AT3G51920 28.676 136 96 1 17 152 12 146 3.10e-11 58.5
MsG0580024305.01.T01 AT1G76040 33.088 136 82 3 22 154 183 312 3.43e-11 60.1
MsG0580024305.01.T01 AT1G76040 33.088 136 82 3 22 154 183 312 3.43e-11 60.1
MsG0580024305.01.T01 AT1G76040 33.088 136 82 3 22 154 421 550 3.65e-11 60.5
MsG0580024305.01.T01 AT1G12310 28.472 144 96 4 15 154 8 148 6.56e-11 57.4
MsG0580024305.01.T01 AT1G21550 33.793 145 77 4 21 152 14 152 7.60e-11 57.4

Find 29 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACAATGTGCAGTTCTTT+TGG 0.251922 5:+3223332 None:intergenic
AAGAAATGATTTCGTATTCT+TGG 0.267268 5:-3223661 None:intergenic
CACATTGTTCTTAATAAACT+TGG 0.346651 5:-3223320 MsG0580024305.01.T01:CDS
TACTTCATCAGATGTCGTTT+TGG 0.347899 5:+3223517 None:intergenic
TCATACCGTAATCACCGTTT+TGG 0.378053 5:+3223636 None:intergenic
AAAGAAATGCTTTCAACGCT+TGG 0.389101 5:-3223542 MsG0580024305.01.T01:CDS
TGGAACCAAAACGGTGATTA+CGG 0.396473 5:-3223641 MsG0580024305.01.T01:CDS
CGACGTTGCTTATCATTCTC+AGG 0.449084 5:+3223273 None:intergenic
AGCGTTGAAAGCATTTCTTT+CGG 0.471052 5:+3223545 None:intergenic
TGACGGAAACATTAACTTTG+AGG 0.498713 5:-3223240 MsG0580024305.01.T01:CDS
TCGTATTCTTGGAACCAAAA+CGG 0.526744 5:-3223650 MsG0580024305.01.T01:CDS
TGAGGAGTTCAAGAAGATGA+TGG 0.534080 5:-3223222 MsG0580024305.01.T01:CDS
CGGATTGATCAGAACGGCGA+TGG 0.536019 5:-3223479 MsG0580024305.01.T01:CDS
TTCAACAAGTTCGACAAGAA+CGG 0.554513 5:-3223593 MsG0580024305.01.T01:CDS
GATTTCCACTGCACTCATGT+TGG 0.557381 5:-3223431 MsG0580024305.01.T01:CDS
TGATGAAGTAAAACGCATGA+AGG 0.558820 5:-3223504 MsG0580024305.01.T01:CDS
CGTCCTTGTCGAGGTCGTAA+AGG 0.575303 5:+3223366 None:intergenic
AAGTAAAACGCATGAAGGAA+CGG 0.584140 5:-3223499 MsG0580024305.01.T01:CDS
AAGTTCGACAAGAACGGCGA+CGG 0.611394 5:-3223587 MsG0580024305.01.T01:CDS
CGACCTTTACGACCTCGACA+AGG 0.613996 5:-3223369 MsG0580024305.01.T01:CDS
AACGTCGATGTTGATGATGA+CGG 0.629007 5:-3223257 MsG0580024305.01.T01:CDS
CATTCTCAGGTAGTCACCGA+GGG 0.631930 5:+3223286 None:intergenic
CTTGGCGAGAAGTACTCCCT+CGG 0.634170 5:-3223302 MsG0580024305.01.T01:CDS
AGATGAGGCCGTCCTTGTCG+AGG 0.636799 5:+3223357 None:intergenic
CATCACCAACATGAGTGCAG+TGG 0.646931 5:+3223426 None:intergenic
AAGGAACGGATTGATCAGAA+CGG 0.690029 5:-3223485 MsG0580024305.01.T01:CDS
CTTTACGACCTCGACAAGGA+CGG 0.703036 5:-3223365 MsG0580024305.01.T01:CDS
TCATTCTCAGGTAGTCACCG+AGG 0.703464 5:+3223285 None:intergenic
TGATTACGGTATGAACGACG+AGG 0.775749 5:-3223627 MsG0580024305.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CACATTGTTCTTAATAAACT+TGG - Chr5:3223550-3223569 MsG0580024305.01.T01:CDS 25.0%
AAAGAAATGCTTTCAACGCT+TGG - Chr5:3223328-3223347 MsG0580024305.01.T01:CDS 35.0%
AAGTAAAACGCATGAAGGAA+CGG - Chr5:3223371-3223390 MsG0580024305.01.T01:CDS 35.0%
TCGTATTCTTGGAACCAAAA+CGG - Chr5:3223220-3223239 MsG0580024305.01.T01:CDS 35.0%
TGACGGAAACATTAACTTTG+AGG - Chr5:3223630-3223649 MsG0580024305.01.T01:CDS 35.0%
TGATGAAGTAAAACGCATGA+AGG - Chr5:3223366-3223385 MsG0580024305.01.T01:CDS 35.0%
TTCAACAAGTTCGACAAGAA+CGG - Chr5:3223277-3223296 MsG0580024305.01.T01:CDS 35.0%
! AGAACAATGTGCAGTTCTTT+TGG + Chr5:3223541-3223560 None:intergenic 35.0%
!! AGCGTTGAAAGCATTTCTTT+CGG + Chr5:3223328-3223347 None:intergenic 35.0%
!! TACTTCATCAGATGTCGTTT+TGG + Chr5:3223356-3223375 None:intergenic 35.0%
TGAGGAGTTCAAGAAGATGA+TGG - Chr5:3223648-3223667 MsG0580024305.01.T01:CDS 40.0%
TGGAACCAAAACGGTGATTA+CGG - Chr5:3223229-3223248 MsG0580024305.01.T01:CDS 40.0%
! TCATACCGTAATCACCGTTT+TGG + Chr5:3223237-3223256 None:intergenic 40.0%
!! AACGTCGATGTTGATGATGA+CGG - Chr5:3223613-3223632 MsG0580024305.01.T01:CDS 40.0%
!! AAGGAACGGATTGATCAGAA+CGG - Chr5:3223385-3223404 MsG0580024305.01.T01:CDS 40.0%
CGACGTTGCTTATCATTCTC+AGG + Chr5:3223600-3223619 None:intergenic 45.0%
GATTTCCACTGCACTCATGT+TGG - Chr5:3223439-3223458 MsG0580024305.01.T01:CDS 45.0%
TGATTACGGTATGAACGACG+AGG - Chr5:3223243-3223262 MsG0580024305.01.T01:CDS 45.0%
!! GCAGTTCTTTTGGAGAGATG+AGG + Chr5:3223531-3223550 None:intergenic 45.0%
AAGTTCGACAAGAACGGCGA+CGG - Chr5:3223283-3223302 MsG0580024305.01.T01:CDS 50.0%
CATCACCAACATGAGTGCAG+TGG + Chr5:3223447-3223466 None:intergenic 50.0%
CATTCTCAGGTAGTCACCGA+GGG + Chr5:3223587-3223606 None:intergenic 50.0%
CTTTACGACCTCGACAAGGA+CGG - Chr5:3223505-3223524 MsG0580024305.01.T01:CDS 50.0%
TCATTCTCAGGTAGTCACCG+AGG + Chr5:3223588-3223607 None:intergenic 50.0%
! GTGAAGCTCGTCGTCTTTTC+TGG + Chr5:3223473-3223492 None:intergenic 50.0%
CGACCTTTACGACCTCGACA+AGG - Chr5:3223501-3223520 MsG0580024305.01.T01:CDS 55.0%
CGGATTGATCAGAACGGCGA+TGG - Chr5:3223391-3223410 MsG0580024305.01.T01:CDS 55.0%
CGTCCTTGTCGAGGTCGTAA+AGG + Chr5:3223507-3223526 None:intergenic 55.0%
!! CTTGGCGAGAAGTACTCCCT+CGG - Chr5:3223568-3223587 MsG0580024305.01.T01:CDS 55.0%
AGATGAGGCCGTCCTTGTCG+AGG + Chr5:3223516-3223535 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 3223214 3223678 3223214 ID=MsG0580024305.01;Name=MsG0580024305.01
Chr5 mRNA 3223214 3223678 3223214 ID=MsG0580024305.01.T01;Parent=MsG0580024305.01;Name=MsG0580024305.01.T01;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|154
Chr5 exon 3223214 3223678 3223214 ID=MsG0580024305.01.T01:exon:1998;Parent=MsG0580024305.01.T01
Chr5 CDS 3223214 3223678 3223214 ID=MsG0580024305.01.T01:cds;Parent=MsG0580024305.01.T01
Gene Sequence

>MsG0580024305.01.T01

ATGATTTCGTATTCTTGGAACCAAAACGGTGATTACGGTATGAACGACGAGGTGTGTAACATCTTCAACAAGTTCGACAAGAACGGCGACGGAAAAATCTCTCTCTTAGATCCGAAAGAAATGCTTTCAACGCTTGGATCCAAAACGACATCTGATGAAGTAAAACGCATGAAGGAACGGATTGATCAGAACGGCGATGGTTACATTGATCTCAAAGAATTTGCTGATTTCCACTGCACTCATGTTGGTGATGCTGCCAGAAAAGACGACGAGCTTCACGATGCTATCGACCTTTACGACCTCGACAAGGACGGCCTCATCTCTCCAAAAGAACTGCACATTGTTCTTAATAAACTTGGCGAGAAGTACTCCCTCGGTGACTACCTGAGAATGATAAGCAACGTCGATGTTGATGATGACGGAAACATTAACTTTGAGGAGTTCAAGAAGATGATGGCTCGTTGA

Protein sequence

>MsG0580024305.01.T01

MISYSWNQNGDYGMNDEVCNIFNKFDKNGDGKISLLDPKEMLSTLGSKTTSDEVKRMKERIDQNGDGYIDLKEFADFHCTHVGDAARKDDELHDAIDLYDLDKDGLISPKELHIVLNKLGEKYSLGDYLRMISNVDVDDDGNINFEEFKKMMAR*