AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030764.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030764.01.T01 MTR_6g012180 97.170 318 5 1 1 314 1 318 0.0 636
MsG0680030764.01.T01 MTR_7g010210 65.644 326 79 9 1 305 1 314 9.00e-140 398
MsG0680030764.01.T01 MTR_7g010210 62.058 311 61 6 1 305 1 260 2.67e-125 359
MsG0680030764.01.T01 MTR_0140s0030 53.681 326 124 9 1 305 2 321 1.08e-108 320
MsG0680030764.01.T01 MTR_0489s0020 53.681 326 124 9 1 305 2 321 1.08e-108 320
MsG0680030764.01.T01 MTR_3g039990 54.574 317 104 9 1 302 2 293 1.76e-107 315
MsG0680030764.01.T01 MTR_7g087130 57.522 226 66 3 1 226 1 196 1.23e-77 240
MsG0680030764.01.T01 MTR_6g012690 69.748 119 36 0 1 119 1 119 3.74e-59 193
MsG0680030764.01.T01 MTR_4g478180 68.908 119 37 0 1 119 2 120 3.37e-58 191
MsG0680030764.01.T01 MTR_1g100653 67.797 118 38 0 1 118 1 118 5.90e-58 188
MsG0680030764.01.T01 MTR_1g076150 69.492 118 36 0 1 118 1 118 6.18e-58 187
MsG0680030764.01.T01 MTR_7g011170 68.067 119 38 0 1 119 1 119 3.61e-57 187
MsG0680030764.01.T01 MTR_7g076740 69.167 120 36 1 1 119 1 120 3.69e-57 187
MsG0680030764.01.T01 MTR_2g089620 66.102 118 40 0 1 118 1 118 1.23e-56 186
MsG0680030764.01.T01 MTR_3g074520 65.546 119 41 0 1 119 1 119 2.71e-56 186
MsG0680030764.01.T01 MTR_1g043050 68.103 116 37 0 1 116 1 116 2.84e-56 183
MsG0680030764.01.T01 MTR_1g043080 68.103 116 37 0 1 116 1 116 5.51e-56 182
MsG0680030764.01.T01 MTR_4g082290 68.067 119 38 0 1 119 1 119 2.63e-55 185
MsG0680030764.01.T01 MTR_4g082230 68.067 119 38 0 1 119 1 119 9.52e-55 183
MsG0680030764.01.T01 MTR_5g007370 63.866 119 43 0 1 119 1 119 4.41e-54 179
MsG0680030764.01.T01 MTR_7g115650 60.331 121 48 0 1 121 1 121 8.05e-54 175
MsG0680030764.01.T01 MTR_5g029840 65.546 119 41 0 1 119 1 119 1.47e-53 178
MsG0680030764.01.T01 MTR_4g121460 64.655 116 41 0 1 116 1 116 3.73e-53 177
MsG0680030764.01.T01 MTR_4g125520 39.373 287 147 7 1 276 1 271 9.57e-53 175
MsG0680030764.01.T01 MTR_8g027345 57.895 133 54 1 1 133 1 131 1.14e-52 175
MsG0680030764.01.T01 MTR_7g096930 64.655 116 41 0 1 116 1 116 1.37e-52 174
MsG0680030764.01.T01 MTR_2g011660 63.333 120 43 1 1 119 1 120 1.70e-52 176
MsG0680030764.01.T01 MTR_7g117730 61.667 120 46 0 1 120 1 120 1.91e-52 173
MsG0680030764.01.T01 MTR_4g091490 61.667 120 45 1 1 119 1 120 4.61e-52 175
MsG0680030764.01.T01 MTR_8g031360 57.143 147 50 4 1 145 1 136 8.58e-52 172
MsG0680030764.01.T01 MTR_5g078140 64.706 119 42 0 1 119 1 119 2.07e-51 172
MsG0680030764.01.T01 MTR_3g461490 50.625 160 72 1 1 160 1 153 2.79e-51 172
MsG0680030764.01.T01 MTR_3g065440 64.706 119 42 0 1 119 1 119 3.10e-51 172
MsG0680030764.01.T01 MTR_3g097450 63.793 116 42 0 1 116 1 116 3.30e-51 171
MsG0680030764.01.T01 MTR_4g073420 45.405 185 91 1 1 185 1 175 1.15e-50 169
MsG0680030764.01.T01 MTR_2g034790 45.876 194 103 2 1 193 1 193 1.76e-50 170
MsG0680030764.01.T01 MTR_6g009430 61.345 119 46 0 1 119 1 119 3.90e-50 169
MsG0680030764.01.T01 MTR_3g103570 65.812 117 39 1 1 116 1 117 2.69e-49 167
MsG0680030764.01.T01 MTR_5g079670 60.169 118 47 0 2 119 1 118 4.08e-49 163
MsG0680030764.01.T01 MTR_4g102380 63.025 119 44 0 1 119 1 119 4.19e-49 165
MsG0680030764.01.T01 MTR_1g017000 62.393 117 43 1 1 116 1 117 4.51e-49 164
MsG0680030764.01.T01 MTR_4g057635 60.484 124 48 1 1 123 1 124 1.10e-48 165
MsG0680030764.01.T01 MTR_1g017140 64.103 117 41 1 1 116 1 117 3.21e-48 165
MsG0680030764.01.T01 MTR_7g102110 59.677 124 49 1 1 123 1 124 4.65e-48 162
MsG0680030764.01.T01 MTR_5g014990 64.103 117 41 1 1 116 1 117 9.48e-48 162
MsG0680030764.01.T01 MTR_8g098860 59.322 118 48 0 1 118 1 118 1.34e-47 162
MsG0680030764.01.T01 MTR_2g089450 53.957 139 64 0 1 139 1 139 2.34e-47 160
MsG0680030764.01.T01 MTR_3g083540 60.714 112 44 0 5 116 34 145 6.85e-47 160
MsG0680030764.01.T01 MTR_6g090405 60.317 126 49 1 1 125 1 126 8.12e-47 158
MsG0680030764.01.T01 MTR_2g067420 60.550 109 43 0 3 111 5 113 1.31e-46 160
MsG0680030764.01.T01 MTR_2g095520 63.964 111 39 1 1 110 1 111 1.63e-46 159
MsG0680030764.01.T01 MTR_1g085040 60.169 118 47 0 1 118 1 118 2.70e-46 160
MsG0680030764.01.T01 MTR_8g095390 57.759 116 49 0 1 116 1 116 3.66e-46 159
MsG0680030764.01.T01 MTR_2g064160 59.459 111 45 0 6 116 5 115 1.02e-45 157
MsG0680030764.01.T01 MTR_0251s0050 54.688 128 57 1 1 127 1 128 1.10e-45 156
MsG0680030764.01.T01 MTR_4g128670 52.907 172 70 4 1 164 1 169 2.12e-45 157
MsG0680030764.01.T01 MTR_0008s0390 53.788 132 59 2 1 130 1 132 9.12e-45 154
MsG0680030764.01.T01 MTR_4g105130 60.169 118 47 0 1 118 1 118 9.37e-45 156
MsG0680030764.01.T01 MTR_0063s0090 59.292 113 46 0 1 113 1 113 1.80e-44 151
MsG0680030764.01.T01 MTR_1g112760 44.131 213 100 6 3 205 4 207 1.98e-44 151
MsG0680030764.01.T01 MTR_7g110830 57.627 118 50 0 1 118 1 118 2.46e-44 155
MsG0680030764.01.T01 MTR_1g085640 56.780 118 51 0 1 118 1 118 2.49e-44 155
MsG0680030764.01.T01 MTR_2g097910 60.177 113 45 0 12 124 20 132 3.80e-44 153
MsG0680030764.01.T01 MTR_4g097570 61.818 110 41 1 1 109 1 110 5.13e-44 152
MsG0680030764.01.T01 MTR_5g010020 61.321 106 41 0 6 111 6 111 8.48e-44 153
MsG0680030764.01.T01 MTR_5g042030 57.798 109 46 0 11 119 6 114 1.75e-43 151
MsG0680030764.01.T01 MTR_2g099740 59.459 111 45 0 6 116 6 116 2.10e-43 154
MsG0680030764.01.T01 MTR_4g100720 57.500 120 51 0 9 128 10 129 3.44e-43 146
MsG0680030764.01.T01 MTR_8g017440 57.658 111 47 0 6 116 6 116 3.50e-43 151
MsG0680030764.01.T01 MTR_0008s0470 56.897 116 49 1 1 115 1 116 4.89e-43 150
MsG0680030764.01.T01 MTR_3g077110 60.169 118 47 0 1 118 1 118 4.92e-43 151
MsG0680030764.01.T01 MTR_0008s0280 56.140 114 50 0 1 114 1 114 5.77e-43 148
MsG0680030764.01.T01 MTR_4g065017 59.292 113 46 0 12 124 17 129 6.29e-43 150
MsG0680030764.01.T01 MTR_2g089420 57.627 118 49 1 1 118 1 117 8.96e-43 153
MsG0680030764.01.T01 MTR_3g052450 57.658 111 47 0 8 118 36 146 1.45e-42 154
MsG0680030764.01.T01 MTR_7g035075 56.522 115 50 0 12 126 14 128 1.45e-42 146
MsG0680030764.01.T01 MTR_8g017500 52.419 124 59 0 1 124 1 124 1.46e-42 150
MsG0680030764.01.T01 MTR_7g111290 62.385 109 41 0 1 109 1 109 1.47e-42 151
MsG0680030764.01.T01 MTR_3g052430 59.813 107 43 0 12 118 41 147 1.56e-42 154
MsG0680030764.01.T01 MTR_8g020490 59.504 121 45 1 1 121 1 117 1.60e-42 147
MsG0680030764.01.T01 MTR_7g109320 54.400 125 57 0 1 125 1 125 1.85e-42 150
MsG0680030764.01.T01 MTR_8g017540 57.658 111 47 0 6 116 52 162 1.95e-42 151
MsG0680030764.01.T01 MTR_4g097570 61.261 111 41 2 1 109 1 111 2.14e-42 148
MsG0680030764.01.T01 MTR_4g485530 56.780 118 50 1 2 118 1 118 2.68e-42 145
MsG0680030764.01.T01 MTR_8g042410 61.321 106 41 0 12 117 37 142 5.26e-42 152
MsG0680030764.01.T01 MTR_5g079120 51.449 138 61 2 8 140 57 193 1.50e-41 146
MsG0680030764.01.T01 MTR_3g011610 59.434 106 43 0 12 117 37 142 2.00e-41 150
MsG0680030764.01.T01 MTR_1g100667 59.434 106 43 0 13 118 14 119 2.18e-41 145
MsG0680030764.01.T01 MTR_3g028740 59.091 110 45 0 8 117 18 127 4.88e-41 146
MsG0680030764.01.T01 MTR_1g086510 55.172 116 52 0 11 126 20 135 9.96e-41 143
MsG0680030764.01.T01 MTR_0197s0010 60.377 106 42 0 16 121 5 110 1.29e-40 142
MsG0680030764.01.T01 MTR_1g086530 52.101 119 57 0 8 126 29 147 8.57e-40 141
MsG0680030764.01.T01 MTR_8g017340 56.410 117 50 1 1 116 1 117 9.21e-40 145
MsG0680030764.01.T01 MTR_6g006030 50.820 122 58 1 1 120 1 122 1.48e-39 138
MsG0680030764.01.T01 MTR_8g017390 57.143 112 47 1 6 116 6 117 1.69e-39 144
MsG0680030764.01.T01 MTR_2g088170 59.633 109 44 0 9 117 26 134 1.70e-39 144
MsG0680030764.01.T01 MTR_1g045610 57.143 112 48 0 6 117 15 126 2.26e-39 139
MsG0680030764.01.T01 MTR_5g079220 56.364 110 48 0 7 116 16 125 7.45e-39 138
MsG0680030764.01.T01 MTR_5g079290 57.944 107 45 0 10 116 15 121 8.89e-39 138
MsG0680030764.01.T01 MTR_0247s0040 59.223 103 42 0 11 113 6 108 1.00e-38 135
MsG0680030764.01.T01 MTR_1g110460 50.000 118 59 0 12 129 26 143 1.94e-38 138
MsG0680030764.01.T01 MTR_1g073170 58.095 105 44 0 13 117 21 125 3.53e-38 136
MsG0680030764.01.T01 MTR_6g055910 57.009 107 46 0 9 115 11 117 6.05e-38 136
MsG0680030764.01.T01 MTR_8g017350 54.701 117 52 1 1 116 1 117 6.46e-38 142
MsG0680030764.01.T01 MTR_0193s0090 39.474 190 100 3 11 185 6 195 1.47e-37 133
MsG0680030764.01.T01 MTR_1g021230 57.692 104 44 0 12 115 57 160 1.60e-37 139
MsG0680030764.01.T01 MTR_5g078800 57.547 106 45 0 11 116 6 111 4.11e-37 134
MsG0680030764.01.T01 MTR_2g096380 53.271 107 50 0 9 115 3 109 2.24e-36 130
MsG0680030764.01.T01 MTR_7g017260 56.481 108 45 1 11 116 24 131 2.32e-36 132
MsG0680030764.01.T01 MTR_5g078860 56.075 107 47 0 10 116 5 111 2.32e-36 132
MsG0680030764.01.T01 MTR_5g078910 56.190 105 46 0 12 116 7 111 4.19e-36 132
MsG0680030764.01.T01 MTR_0001s0360 56.075 107 47 0 10 116 5 111 9.44e-36 129
MsG0680030764.01.T01 MTR_5g078950 56.731 104 45 0 10 113 5 108 1.19e-35 130
MsG0680030764.01.T01 MTR_8g060940 56.863 102 44 0 11 112 6 107 2.70e-35 128
MsG0680030764.01.T01 MTR_2g033170 49.580 119 60 0 8 126 20 138 1.02e-34 129
MsG0680030764.01.T01 MTR_5g078930 56.311 103 45 0 13 115 10 112 2.17e-34 125
MsG0680030764.01.T01 MTR_8g006470 49.558 113 55 2 8 119 6 117 4.45e-34 126
MsG0680030764.01.T01 MTR_5g007300 59.091 88 36 0 1 88 53 140 2.64e-33 120
MsG0680030764.01.T01 MTR_4g123040 48.739 119 61 0 8 126 20 138 6.68e-33 124
MsG0680030764.01.T01 MTR_3g045430 49.167 120 60 1 1 119 1 120 3.43e-32 121
MsG0680030764.01.T01 MTR_4g063100 49.533 107 54 0 9 115 4 110 4.09e-32 120
MsG0680030764.01.T01 MTR_1g062940 49.057 106 54 0 12 117 6 111 5.44e-32 119
MsG0680030764.01.T01 MTR_5g062790 44.030 134 73 2 12 144 9 141 9.40e-32 120
MsG0680030764.01.T01 MTR_5g088080 42.537 134 75 2 12 144 12 144 3.20e-31 118
MsG0680030764.01.T01 MTR_5g088150 42.537 134 75 2 12 144 12 144 3.20e-31 118
MsG0680030764.01.T01 MTR_5g488210 42.537 134 75 2 12 144 12 144 3.20e-31 118
MsG0680030764.01.T01 MTR_4g029540 48.077 104 53 1 12 114 10 113 4.12e-31 119
MsG0680030764.01.T01 MTR_5g088640 42.537 134 75 2 12 144 12 144 4.57e-31 118
MsG0680030764.01.T01 MTR_5g488170 42.537 134 75 2 12 144 12 144 5.20e-31 117
MsG0680030764.01.T01 MTR_5g088610 49.533 107 53 1 12 117 9 115 2.75e-30 117
MsG0680030764.01.T01 MTR_1g083630 47.273 110 58 0 8 117 8 117 6.49e-30 119
MsG0680030764.01.T01 MTR_4g019370 50.000 102 50 1 14 115 38 138 9.86e-30 116
MsG0680030764.01.T01 MTR_5g016510 47.273 110 49 2 14 119 5 109 1.83e-27 109
MsG0680030764.01.T01 MTR_7g111290 71.212 66 19 0 44 109 2 67 1.42e-26 107
MsG0680030764.01.T01 MTR_4g094982 47.170 106 47 2 14 115 5 105 2.52e-26 105
MsG0680030764.01.T01 MTR_3g101290 48.039 102 52 1 14 115 37 137 4.41e-26 103
MsG0680030764.01.T01 MTR_6g055910 63.380 71 26 0 45 115 18 88 5.54e-26 103
MsG0680030764.01.T01 MTR_2g096380 59.722 72 29 0 44 115 19 90 1.23e-25 102
MsG0680030764.01.T01 MTR_6g015455 48.113 106 46 2 14 115 5 105 3.32e-25 106
MsG0680030764.01.T01 MTR_3g110028 44.660 103 56 1 14 116 85 186 1.25e-24 104
MsG0680030764.01.T01 MTR_1g085880 48.571 105 52 2 12 114 11 115 1.82e-24 98.6
MsG0680030764.01.T01 MTR_4g063100 58.333 72 30 0 44 115 10 81 2.48e-24 99.0
MsG0680030764.01.T01 MTR_6g074860 44.554 101 55 1 14 114 4 103 3.80e-24 99.0
MsG0680030764.01.T01 MTR_7g061550 41.667 108 61 1 17 122 10 117 1.01e-23 100
MsG0680030764.01.T01 MTR_1g085770 48.571 105 52 2 12 114 11 115 1.50e-23 98.6
MsG0680030764.01.T01 MTR_7g061330 46.729 107 48 2 14 116 113 214 1.62e-23 101
MsG0680030764.01.T01 MTR_7g461410 46.729 107 48 2 14 116 113 214 1.62e-23 101
MsG0680030764.01.T01 MTR_7g061330 46.729 107 48 2 14 116 77 178 2.48e-23 100
MsG0680030764.01.T01 MTR_4g128190 43.636 110 47 3 10 118 9 104 2.59e-23 96.7
MsG0680030764.01.T01 MTR_1g026870 41.748 103 59 1 14 116 85 186 2.81e-23 100
MsG0680030764.01.T01 MTR_0023s0210 55.128 78 35 0 11 88 6 83 4.40e-23 91.3
MsG0680030764.01.T01 MTR_6g027340 35.385 130 80 2 14 140 16 144 6.16e-23 94.7
MsG0680030764.01.T01 MTR_6g027370 38.793 116 70 1 14 129 99 213 7.47e-23 97.4
MsG0680030764.01.T01 MTR_5g082910 46.226 106 55 2 8 112 12 116 4.22e-22 94.4
MsG0680030764.01.T01 MTR_3g463400 38.938 113 68 1 3 115 122 233 4.38e-22 96.3
MsG0680030764.01.T01 MTR_4g105660 41.121 107 62 1 12 118 178 283 1.38e-21 94.7
MsG0680030764.01.T01 MTR_7g037260 39.496 119 70 2 12 129 143 260 2.25e-21 93.6
MsG0680030764.01.T01 MTR_5g070020 40.566 106 62 1 10 115 118 222 3.40e-21 92.8
MsG0680030764.01.T01 MTR_3g077650 41.905 105 60 1 14 118 181 284 3.48e-21 93.6
MsG0680030764.01.T01 MTR_6g027360 34.091 132 83 2 12 140 76 206 3.89e-21 92.0
MsG0680030764.01.T01 MTR_5g049190 41.176 102 57 2 8 108 13 112 4.83e-21 90.5
MsG0680030764.01.T01 MTR_5g041570 40.000 105 62 1 14 118 134 237 8.72e-21 92.4
MsG0680030764.01.T01 MTR_4g082040 40.000 105 62 1 14 118 105 208 9.34e-21 92.4
MsG0680030764.01.T01 MTR_7g451170 39.496 119 66 3 14 129 191 306 1.16e-20 92.0
MsG0680030764.01.T01 MTR_4g088015 38.655 119 71 2 12 129 219 336 5.50e-20 90.1
MsG0680030764.01.T01 MTR_7g450950 36.496 137 76 4 14 142 157 290 6.37e-20 89.0
MsG0680030764.01.T01 MTR_1g057980 42.424 99 56 1 12 110 78 175 9.09e-20 87.8
MsG0680030764.01.T01 MTR_3g089045 37.838 111 68 1 8 118 10 119 9.82e-19 85.1
MsG0680030764.01.T01 MTR_7g086960 39.216 102 61 1 14 115 89 189 2.23e-18 84.7
MsG0680030764.01.T01 MTR_5g010650 41.000 100 50 2 14 109 110 204 8.94e-18 84.0
MsG0680030764.01.T01 MTR_7g035350 40.426 94 55 1 17 110 228 320 1.72e-17 82.8
MsG0680030764.01.T01 MTR_7g037130 36.134 119 74 2 12 129 143 260 1.73e-17 82.4
MsG0680030764.01.T01 MTR_5g038910 38.614 101 61 1 17 117 29 128 3.00e-16 79.3
MsG0680030764.01.T01 MTR_5g038910 38.614 101 61 1 17 117 29 128 3.55e-16 79.0
MsG0680030764.01.T01 MTR_8g468380 38.614 101 61 1 17 117 25 124 7.26e-16 78.2
MsG0680030764.01.T01 MTR_2g096380 52.083 48 23 0 70 117 1 48 2.24e-11 62.0
MsG0680030764.01.T01 MTR_6g055910 56.522 46 20 0 70 115 2 47 7.74e-11 61.2
MsG0680030764.01.T01 MTR_4g063100 54.348 46 21 0 70 115 1 46 7.96e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030764.01.T01 AT3G28910 55.312 320 115 6 1 302 1 310 1.77e-110 323
MsG0680030764.01.T01 AT3G47600 52.960 321 121 6 1 298 1 314 3.14e-102 303
MsG0680030764.01.T01 AT5G62470 50.980 357 113 12 1 308 1 344 7.54e-99 295
MsG0680030764.01.T01 AT5G62470 50.980 357 112 13 1 308 1 343 2.22e-97 291
MsG0680030764.01.T01 AT1G74650 49.701 334 106 7 1 298 1 308 1.23e-92 278
MsG0680030764.01.T01 AT1G08810 60.829 217 35 4 1 217 1 167 2.30e-82 251
MsG0680030764.01.T01 AT3G47600 46.263 281 113 7 45 298 39 308 2.84e-67 213
MsG0680030764.01.T01 AT3G01140 49.038 208 87 5 1 194 1 203 1.79e-60 196
MsG0680030764.01.T01 AT5G15310 53.591 181 76 3 1 173 1 181 2.18e-59 191
MsG0680030764.01.T01 AT3G01140 49.038 208 87 5 1 194 44 246 2.50e-59 195
MsG0680030764.01.T01 AT5G15310 42.553 282 130 9 1 263 1 269 3.02e-59 192
MsG0680030764.01.T01 AT5G15310 53.591 181 76 3 1 173 1 181 4.01e-59 192
MsG0680030764.01.T01 AT3G61250 54.217 166 70 3 1 160 1 166 1.80e-57 187
MsG0680030764.01.T01 AT2G31180 68.644 118 37 0 1 118 1 118 3.01e-56 182
MsG0680030764.01.T01 AT3G02940 64.706 119 42 0 1 119 1 119 4.30e-56 184
MsG0680030764.01.T01 AT4G28110 65.254 118 41 0 1 118 1 118 6.48e-56 183
MsG0680030764.01.T01 AT3G23250 67.521 117 38 0 1 117 1 117 7.52e-56 183
MsG0680030764.01.T01 AT5G16770 65.546 119 41 0 1 119 1 119 7.93e-56 184
MsG0680030764.01.T01 AT5G16770 65.546 119 41 0 1 119 1 119 7.93e-56 184
MsG0680030764.01.T01 AT4G21440 65.546 119 41 0 1 119 1 119 8.98e-56 184
MsG0680030764.01.T01 AT3G02940 64.706 119 42 0 1 119 1 119 9.31e-56 184
MsG0680030764.01.T01 AT3G02940 64.706 119 42 0 1 119 1 119 9.31e-56 184
MsG0680030764.01.T01 AT5G16770 65.546 119 41 0 1 119 1 119 2.09e-55 183
MsG0680030764.01.T01 AT5G16770 65.546 119 41 0 1 119 1 119 2.09e-55 183
MsG0680030764.01.T01 AT1G06180 63.492 126 46 0 1 126 1 126 1.55e-53 176
MsG0680030764.01.T01 AT4G05100 64.167 120 42 1 1 119 1 120 4.56e-53 177
MsG0680030764.01.T01 AT1G34670 63.025 119 44 0 1 119 1 119 6.54e-53 177
MsG0680030764.01.T01 AT1G56160 62.281 114 43 0 3 116 5 118 6.76e-53 176
MsG0680030764.01.T01 AT1G66230 55.556 144 64 0 1 144 1 144 6.63e-52 172
MsG0680030764.01.T01 AT5G60890 63.559 118 43 0 1 118 1 118 9.78e-52 172
MsG0680030764.01.T01 AT2G16720 64.655 116 41 0 1 116 1 116 1.13e-51 171
MsG0680030764.01.T01 AT5G56110 58.015 131 55 0 1 131 1 131 1.67e-51 172
MsG0680030764.01.T01 AT5G61420 62.931 116 43 0 1 116 1 116 2.08e-51 174
MsG0680030764.01.T01 AT4G09460 62.931 116 43 0 1 116 1 116 2.32e-51 170
MsG0680030764.01.T01 AT5G54230 70.370 108 32 0 12 119 12 119 2.40e-51 172
MsG0680030764.01.T01 AT1G35515 61.207 116 45 0 1 116 1 116 5.66e-51 168
MsG0680030764.01.T01 AT1G79180 63.158 114 42 0 3 116 5 118 1.09e-50 170
MsG0680030764.01.T01 AT4G17785 62.500 120 44 1 1 119 1 120 1.48e-50 171
MsG0680030764.01.T01 AT4G12350 60.465 129 51 0 1 129 1 129 1.57e-50 169
MsG0680030764.01.T01 AT4G17785 62.500 120 44 1 1 119 1 120 2.17e-50 171
MsG0680030764.01.T01 AT1G18570 64.706 119 41 1 1 118 1 119 2.98e-50 170
MsG0680030764.01.T01 AT5G07690 62.931 116 43 0 1 116 1 116 3.03e-50 170
MsG0680030764.01.T01 AT1G22640 61.207 116 45 0 1 116 1 116 3.38e-50 167
MsG0680030764.01.T01 AT1G74080 61.017 118 46 0 1 118 1 118 4.59e-50 169
MsG0680030764.01.T01 AT4G38620 61.207 116 45 0 1 116 1 116 5.30e-50 167
MsG0680030764.01.T01 AT3G13540 63.393 112 41 0 5 116 16 127 8.05e-50 166
MsG0680030764.01.T01 AT5G10280 60.504 119 47 0 1 119 1 119 2.59e-49 167
MsG0680030764.01.T01 AT5G65230 60.504 119 47 0 1 119 1 119 3.86e-49 166
MsG0680030764.01.T01 AT5G49330 60.345 116 46 0 1 116 1 116 4.25e-49 167
MsG0680030764.01.T01 AT1G16490 55.725 131 51 1 3 133 5 128 7.11e-49 164
MsG0680030764.01.T01 AT3G49690 60.465 129 50 1 1 128 1 129 7.56e-49 166
MsG0680030764.01.T01 AT3G28910 43.443 244 110 6 77 302 1 234 8.68e-49 163
MsG0680030764.01.T01 AT4G34990 61.207 116 45 0 1 116 1 116 1.38e-48 164
MsG0680030764.01.T01 AT5G57620 63.248 117 42 1 1 116 1 117 2.10e-48 165
MsG0680030764.01.T01 AT5G16600 60.504 119 47 0 1 119 1 119 2.62e-48 164
MsG0680030764.01.T01 AT4G37780 62.393 117 43 1 1 116 1 117 3.62e-48 164
MsG0680030764.01.T01 AT5G07700 43.229 192 97 2 1 192 1 180 4.53e-48 164
MsG0680030764.01.T01 AT5G07700 43.229 192 97 2 1 192 1 180 4.53e-48 164
MsG0680030764.01.T01 AT1G74430 64.407 118 42 0 1 118 1 118 6.67e-48 162
MsG0680030764.01.T01 AT2G47460 57.983 119 50 0 1 119 1 119 1.31e-47 164
MsG0680030764.01.T01 AT5G23000 61.538 117 44 1 1 116 1 117 5.46e-47 161
MsG0680030764.01.T01 AT5G65790 63.248 117 42 1 1 116 1 117 7.12e-47 162
MsG0680030764.01.T01 AT4G22680 60.504 119 47 0 1 119 1 119 7.83e-47 159
MsG0680030764.01.T01 AT1G63910 58.475 118 49 0 1 118 1 118 7.96e-47 162
MsG0680030764.01.T01 AT3G12820 57.364 129 55 0 3 131 5 133 8.24e-47 158
MsG0680030764.01.T01 AT2G36890 62.393 117 43 1 1 116 1 117 1.13e-46 159
MsG0680030764.01.T01 AT2G36890 62.393 117 43 1 1 116 42 158 1.74e-46 160
MsG0680030764.01.T01 AT3G62610 60.345 116 46 0 1 116 1 116 1.77e-46 160
MsG0680030764.01.T01 AT5G14340 59.664 119 48 0 1 119 13 131 3.52e-46 157
MsG0680030764.01.T01 AT5G40330 58.475 118 49 0 13 130 13 130 1.51e-45 154
MsG0680030764.01.T01 AT4G01680 59.829 117 47 0 1 117 1 117 1.60e-45 155
MsG0680030764.01.T01 AT1G57560 58.475 118 49 0 1 118 1 118 2.16e-45 157
MsG0680030764.01.T01 AT1G57560 58.475 118 49 0 1 118 1 118 2.67e-45 155
MsG0680030764.01.T01 AT5G26660 59.322 118 48 0 1 118 1 118 3.19e-45 157
MsG0680030764.01.T01 AT3G13890 59.459 111 45 0 6 116 6 116 3.98e-45 157
MsG0680030764.01.T01 AT1G18710 59.322 118 48 0 1 118 1 118 4.14e-45 154
MsG0680030764.01.T01 AT4G01680 49.032 155 76 1 1 152 1 155 7.42e-45 155
MsG0680030764.01.T01 AT5G14750 63.462 104 38 0 13 116 17 120 8.84e-45 152
MsG0680030764.01.T01 AT5G62320 56.452 124 47 1 3 119 4 127 1.66e-44 152
MsG0680030764.01.T01 AT1G79180 49.660 147 41 1 3 116 5 151 1.94e-44 154
MsG0680030764.01.T01 AT3G28470 59.091 110 45 0 1 110 1 110 2.67e-44 154
MsG0680030764.01.T01 AT2G32460 62.617 107 40 0 11 117 17 123 5.10e-44 157
MsG0680030764.01.T01 AT1G09540 57.627 118 50 0 1 118 1 118 6.25e-44 154
MsG0680030764.01.T01 AT2G32460 62.617 107 40 0 11 117 5 111 6.41e-44 157
MsG0680030764.01.T01 AT5G55020 63.551 107 39 0 12 118 26 132 1.50e-43 156
MsG0680030764.01.T01 AT5G35550 44.751 181 94 2 9 183 11 191 3.12e-43 149
MsG0680030764.01.T01 AT3G12720 56.757 111 48 0 6 116 16 126 7.78e-43 150
MsG0680030764.01.T01 AT5G06100 56.364 110 48 0 8 117 28 137 1.34e-42 152
MsG0680030764.01.T01 AT3G01530 52.756 127 54 2 8 133 20 141 2.32e-42 145
MsG0680030764.01.T01 AT5G52600 52.632 133 59 2 6 135 3 134 2.86e-42 145
MsG0680030764.01.T01 AT3G13890 55.000 120 45 1 6 116 6 125 3.83e-42 149
MsG0680030764.01.T01 AT3G27920 61.538 104 40 0 13 116 15 118 3.88e-42 145
MsG0680030764.01.T01 AT5G06100 56.364 110 48 0 8 117 28 137 4.16e-42 152
MsG0680030764.01.T01 AT5G06100 56.364 110 48 0 8 117 28 137 4.16e-42 152
MsG0680030764.01.T01 AT5G06100 56.364 110 48 0 8 117 28 137 4.16e-42 152
MsG0680030764.01.T01 AT5G06100 56.364 110 48 0 8 117 28 137 4.16e-42 152
MsG0680030764.01.T01 AT3G27810 39.785 186 103 2 12 197 20 196 1.36e-41 144
MsG0680030764.01.T01 AT2G26960 59.459 111 44 1 9 119 17 126 1.72e-41 149
MsG0680030764.01.T01 AT4G01680 45.509 167 76 2 1 152 1 167 1.97e-41 147
MsG0680030764.01.T01 AT3G11440 55.660 106 47 0 12 117 41 146 8.65e-41 148
MsG0680030764.01.T01 AT5G12870 59.259 108 44 0 12 119 18 125 9.37e-41 144
MsG0680030764.01.T01 AT3G08500 57.273 110 47 0 8 117 26 135 1.48e-40 145
MsG0680030764.01.T01 AT3G11440 55.660 106 47 0 12 117 41 146 4.68e-40 147
MsG0680030764.01.T01 AT3G11440 55.660 106 47 0 12 117 41 146 4.68e-40 147
MsG0680030764.01.T01 AT3G11440 55.660 106 47 0 12 117 41 146 4.68e-40 147
MsG0680030764.01.T01 AT3G30210 58.879 107 44 0 11 117 26 132 4.98e-40 141
MsG0680030764.01.T01 AT2G47190 54.386 114 52 0 12 125 20 133 5.47e-40 141
MsG0680030764.01.T01 AT4G26930 57.658 111 43 1 8 114 11 121 1.50e-39 143
MsG0680030764.01.T01 AT3G24310 58.716 109 45 0 9 117 15 123 4.48e-39 139
MsG0680030764.01.T01 AT1G25340 46.099 141 67 1 13 153 19 150 6.68e-39 139
MsG0680030764.01.T01 AT5G40350 54.867 113 50 1 12 123 17 129 1.03e-38 136
MsG0680030764.01.T01 AT1G66370 57.547 106 45 0 10 115 6 111 1.06e-38 137
MsG0680030764.01.T01 AT1G68320 51.282 117 57 0 10 126 17 133 6.73e-38 136
MsG0680030764.01.T01 AT1G48000 52.174 115 55 0 12 126 32 146 1.35e-37 134
MsG0680030764.01.T01 AT3G48920 40.415 193 96 4 9 183 15 206 1.78e-37 134
MsG0680030764.01.T01 AT4G13480 58.095 105 44 0 13 117 7 111 1.84e-37 134
MsG0680030764.01.T01 AT3G46130 54.206 107 49 0 9 115 6 112 1.98e-37 134
MsG0680030764.01.T01 AT5G59780 54.206 107 49 0 9 115 5 111 7.22e-37 132
MsG0680030764.01.T01 AT1G74650 37.984 258 98 7 77 298 1 232 3.38e-36 131
MsG0680030764.01.T01 AT5G52260 57.009 107 46 0 9 115 9 115 1.11e-35 130
MsG0680030764.01.T01 AT1G25340 44.681 141 64 2 13 153 19 145 1.35e-35 130
MsG0680030764.01.T01 AT1G25340 44.681 141 64 2 13 153 19 145 2.66e-35 130
MsG0680030764.01.T01 AT4G25560 51.786 112 54 0 10 121 8 119 2.50e-34 127
MsG0680030764.01.T01 AT1G66380 56.604 106 46 0 10 115 6 111 3.14e-34 122
MsG0680030764.01.T01 AT5G49620 51.304 115 56 0 12 126 26 140 9.18e-34 126
MsG0680030764.01.T01 AT3G06490 50.420 119 59 0 8 126 15 133 1.08e-33 126
MsG0680030764.01.T01 AT3G60460 48.214 112 57 1 9 119 8 119 5.45e-33 124
MsG0680030764.01.T01 AT1G66390 55.660 106 47 0 10 115 6 111 8.77e-33 122
MsG0680030764.01.T01 AT1G56650 55.660 106 47 0 10 115 6 111 1.13e-32 121
MsG0680030764.01.T01 AT3G53200 50.467 107 53 0 9 115 6 112 1.38e-31 118
MsG0680030764.01.T01 AT5G14750 70.000 70 21 0 47 116 17 86 1.25e-30 114
MsG0680030764.01.T01 AT5G49620 45.736 129 56 1 12 126 26 154 3.40e-30 117
MsG0680030764.01.T01 AT5G35550 45.517 145 73 2 45 183 50 194 3.55e-30 115
MsG0680030764.01.T01 AT2G26950 49.505 101 51 0 9 109 13 113 6.63e-30 117
MsG0680030764.01.T01 AT3G12820 61.176 85 33 0 47 131 1 85 1.63e-29 111
MsG0680030764.01.T01 AT5G26660 66.216 74 25 0 45 118 14 87 9.85e-29 113
MsG0680030764.01.T01 AT2G39880 50.000 106 44 2 14 115 50 150 2.42e-28 112
MsG0680030764.01.T01 AT2G23290 50.943 106 43 2 14 115 13 113 2.45e-28 111
MsG0680030764.01.T01 AT4G37260 36.264 182 104 5 14 188 13 189 8.00e-28 110
MsG0680030764.01.T01 AT1G74650 35.223 247 98 7 88 298 7 227 1.63e-27 108
MsG0680030764.01.T01 AT3G55730 47.273 110 49 2 14 119 56 160 2.02e-27 110
MsG0680030764.01.T01 AT3G27810 37.255 153 87 2 45 197 4 147 1.07e-26 103
MsG0680030764.01.T01 AT3G46130 58.667 75 31 0 44 118 9 83 7.36e-26 103
MsG0680030764.01.T01 AT3G09230 44.144 111 53 2 14 120 55 160 9.70e-26 106
MsG0680030764.01.T01 AT5G59780 59.459 74 30 0 45 118 20 93 1.27e-25 102
MsG0680030764.01.T01 AT3G46130 61.972 71 27 0 45 115 20 90 1.71e-25 102
MsG0680030764.01.T01 AT5G02320 46.154 104 55 1 14 117 127 229 4.55e-25 105
MsG0680030764.01.T01 AT5G02320 46.154 104 55 1 14 117 127 229 4.55e-25 105
MsG0680030764.01.T01 AT5G02320 46.602 103 54 1 14 116 67 168 6.43e-25 104
MsG0680030764.01.T01 AT5G40350 56.098 82 35 1 43 123 3 84 1.58e-24 97.8
MsG0680030764.01.T01 AT1G17950 40.336 119 68 2 14 132 5 120 4.79e-24 99.0
MsG0680030764.01.T01 AT3G53200 55.844 77 34 0 39 115 3 79 6.95e-24 97.1
MsG0680030764.01.T01 AT3G50060 45.098 102 55 1 14 115 6 106 1.04e-23 99.0
MsG0680030764.01.T01 AT5G11510 43.810 105 54 2 14 116 81 182 1.29e-23 101
MsG0680030764.01.T01 AT5G11510 43.810 105 54 2 14 116 81 182 1.29e-23 101
MsG0680030764.01.T01 AT5G11510 43.810 105 54 2 14 116 81 182 1.29e-23 101
MsG0680030764.01.T01 AT5G11510 43.810 105 54 2 14 116 81 182 1.51e-23 101
MsG0680030764.01.T01 AT5G11510 43.810 105 54 2 14 116 81 182 1.57e-23 101
MsG0680030764.01.T01 AT4G32730 39.130 115 69 1 14 128 87 200 1.68e-23 101
MsG0680030764.01.T01 AT4G32730 39.130 115 69 1 14 128 87 200 1.68e-23 101
MsG0680030764.01.T01 AT4G32730 39.130 115 69 1 14 128 87 200 1.68e-23 101
MsG0680030764.01.T01 AT4G32730 39.130 115 69 1 14 128 87 200 1.68e-23 101
MsG0680030764.01.T01 AT4G32730 39.130 115 69 1 14 128 87 200 1.75e-23 101
MsG0680030764.01.T01 AT5G67300 45.283 106 49 2 14 115 6 106 1.81e-23 98.6
MsG0680030764.01.T01 AT3G27785 40.458 131 65 3 9 137 184 303 2.03e-23 100
MsG0680030764.01.T01 AT1G69560 40.351 114 67 1 9 122 102 214 2.22e-23 98.6
MsG0680030764.01.T01 AT1G69560 40.351 114 67 1 9 122 118 230 2.99e-23 98.6
MsG0680030764.01.T01 AT1G66380 62.500 72 27 0 44 115 7 78 1.10e-22 90.9
MsG0680030764.01.T01 AT5G40360 37.931 116 70 2 9 124 153 266 1.46e-22 96.7
MsG0680030764.01.T01 AT3G09370 45.098 102 55 1 14 115 135 235 2.68e-22 97.4
MsG0680030764.01.T01 AT3G09370 45.098 102 55 1 14 115 130 230 2.70e-22 97.4
MsG0680030764.01.T01 AT1G22640 65.517 58 20 0 59 116 2 59 2.75e-22 92.8
MsG0680030764.01.T01 AT3G09370 45.098 102 55 1 14 115 143 243 3.42e-22 97.1
MsG0680030764.01.T01 AT1G26780 40.952 105 61 1 14 118 98 201 3.61e-22 94.4
MsG0680030764.01.T01 AT1G18960 42.017 119 62 4 1 119 1 112 5.17e-22 94.4
MsG0680030764.01.T01 AT5G14750 67.241 58 19 0 59 116 2 59 6.22e-22 90.1
MsG0680030764.01.T01 AT5G14750 67.241 58 19 0 59 116 2 59 6.22e-22 90.1
MsG0680030764.01.T01 AT4G33450 36.134 119 75 1 9 127 14 131 7.80e-22 92.8
MsG0680030764.01.T01 AT1G26780 40.952 105 61 1 14 118 98 201 7.90e-22 94.7
MsG0680030764.01.T01 AT3G23250 67.797 59 19 0 59 117 2 60 8.68e-22 92.0
MsG0680030764.01.T01 AT2G37630 40.777 103 59 1 17 117 7 109 1.12e-21 94.4
MsG0680030764.01.T01 AT1G71030 46.429 84 45 0 51 134 5 88 1.62e-21 90.1
MsG0680030764.01.T01 AT1G71030 46.429 84 45 0 51 134 19 102 1.77e-21 90.5
MsG0680030764.01.T01 AT4G18770 38.182 110 67 1 9 118 212 320 1.88e-21 94.4
MsG0680030764.01.T01 AT5G58850 40.000 105 62 1 14 118 105 208 2.17e-21 94.4
MsG0680030764.01.T01 AT1G66380 46.465 99 52 1 10 107 6 104 3.85e-21 87.0
MsG0680030764.01.T01 AT5G11050 35.938 128 79 2 12 137 103 229 4.86e-21 93.2
MsG0680030764.01.T01 AT5G17800 39.048 105 63 1 14 118 93 196 1.66e-20 90.5
MsG0680030764.01.T01 AT3G29020 34.351 131 78 2 14 137 65 194 2.54e-20 88.2
MsG0680030764.01.T01 AT1G73410 40.000 105 62 1 14 118 6 109 3.35e-20 88.2
MsG0680030764.01.T01 AT5G39700 37.719 114 70 1 9 122 51 163 4.26e-20 86.7
MsG0680030764.01.T01 AT3G29020 34.351 131 78 2 14 137 67 196 5.10e-20 89.0
MsG0680030764.01.T01 AT1G73410 40.000 105 62 1 14 118 6 109 6.80e-20 86.3
MsG0680030764.01.T01 AT1G14350 38.614 101 61 1 17 117 28 127 4.17e-17 82.0
MsG0680030764.01.T01 AT1G14350 38.614 101 61 1 17 117 28 127 4.17e-17 82.0
MsG0680030764.01.T01 AT2G02820 38.614 101 61 1 17 117 33 132 4.18e-17 80.9
MsG0680030764.01.T01 AT2G25230 41.748 103 57 3 9 110 21 121 5.78e-17 79.0
MsG0680030764.01.T01 AT1G08810 41.538 130 26 4 88 217 5 84 6.44e-17 78.2
MsG0680030764.01.T01 AT1G08810 41.538 130 26 4 88 217 5 84 6.44e-17 78.2
MsG0680030764.01.T01 AT4G00540 35.714 126 69 3 12 130 101 221 7.75e-17 80.9
MsG0680030764.01.T01 AT2G02820 38.614 101 61 1 17 117 33 132 8.26e-17 80.9
MsG0680030764.01.T01 AT4G00540 35.714 126 69 3 12 130 99 219 9.93e-17 80.9
MsG0680030764.01.T01 AT2G02820 38.614 101 61 1 17 117 33 132 1.00e-16 80.9
MsG0680030764.01.T01 AT5G40430 27.604 192 124 5 9 200 49 225 1.50e-14 72.8
MsG0680030764.01.T01 AT5G59780 53.061 49 23 0 70 118 1 49 1.06e-11 62.8
MsG0680030764.01.T01 AT3G46130 53.061 49 23 0 70 118 1 49 1.26e-11 63.2

Find 42 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATTGTCCTCTAGCTAT+TGG 0.200188 6:-8751250 None:intergenic
AAGAACATGGTCCTGGAAAT+TGG 0.229465 6:+8749992 MsG0680030764.01.T01:CDS
TTACCATTTGATCCTTCTTT+AGG 0.237099 6:-8751481 None:intergenic
TCTAGTGAAGGAATGGAAAA+AGG 0.257243 6:+8751541 MsG0680030764.01.T01:CDS
TCCTGAAGAAGATATCATTT+TGG 0.290596 6:+8749957 MsG0680030764.01.T01:CDS
GAAGCACTAGTCTCATAATT+TGG 0.318971 6:-8751520 None:intergenic
ACTTCTTCTGAATCATGTTT+AGG 0.323676 6:+8751202 MsG0680030764.01.T01:CDS
AGAGTAGTAGAATCAGAATT+TGG 0.353581 6:-8751628 None:intergenic
ACCAAAATGATATCTTCTTC+AGG 0.368108 6:-8749958 None:intergenic
GGAACAGCTTTCCAATTTCC+AGG 0.374375 6:-8750003 None:intergenic
ATGTCATTGTCTGTTCTTTG+TGG 0.397556 6:-8751124 None:intergenic
TTAGATGGACAAATTATCTA+AGG 0.402300 6:+8750572 MsG0680030764.01.T01:CDS
GAGAGTAAACCTGAAAATAT+TGG 0.410276 6:+8751661 MsG0680030764.01.T01:CDS
AAAGCTGTTCCTACCAATAC+TGG 0.417394 6:+8750015 MsG0680030764.01.T01:CDS
ATCTAAGGCCAGGAATCAAA+AGG 0.434110 6:+8750587 MsG0680030764.01.T01:CDS
GTAAGAGTTGCAGACTTAGA+TGG 0.439224 6:+8750557 MsG0680030764.01.T01:CDS
ACCAATAGCTAGAGGACAAT+GGG 0.439491 6:+8751249 MsG0680030764.01.T01:CDS
TATATTCAAGAACATGGTCC+TGG 0.447349 6:+8749985 MsG0680030764.01.T01:CDS
AAACCTAAAGAAGGATCAAA+TGG 0.460507 6:+8751478 MsG0680030764.01.T01:CDS
TTCCTAAAAGAGCTTGAAGA+TGG 0.460852 6:-8750645 None:intergenic
TTGTGGAAGGTATGCAGCTA+TGG 0.471651 6:-8751107 None:intergenic
AACATAGCTCGTTTGTTGAA+AGG 0.493776 6:+8751442 MsG0680030764.01.T01:CDS
TAGCTCGTTTGTTGAAAGGT+TGG 0.493832 6:+8751446 MsG0680030764.01.T01:CDS
CATTGTCTGTTCTTTGTGGA+AGG 0.502539 6:-8751120 None:intergenic
CTAGAGGACAATGGGAAAGA+AGG 0.504422 6:+8751257 MsG0680030764.01.T01:CDS
GATTAAGTAATTACCAGTAT+TGG 0.505516 6:-8750028 None:intergenic
TGGACAAATTATCTAAGGCC+AGG 0.512885 6:+8750577 MsG0680030764.01.T01:CDS
TCTAAGGCCAGGAATCAAAA+GGG 0.514309 6:+8750588 MsG0680030764.01.T01:CDS
TAGTGCTTCTAGTGAAGGAA+TGG 0.515130 6:+8751534 MsG0680030764.01.T01:CDS
GCACTTGATGCATAAGACAT+AGG 0.528117 6:-8751415 None:intergenic
GTTTCTTATATTCAAGAACA+TGG 0.547197 6:+8749979 MsG0680030764.01.T01:CDS
GAGACTAGTGCTTCTAGTGA+AGG 0.577246 6:+8751529 MsG0680030764.01.T01:CDS
ATATCTTCTTCAGGAGTCCA+AGG 0.586539 6:-8749949 None:intergenic
AACCAATAGCTAGAGGACAA+TGG 0.597136 6:+8751248 MsG0680030764.01.T01:CDS
CCACCATGTTGTGATAAAGA+AGG 0.602199 6:+8749913 MsG0680030764.01.T01:CDS
AAGTAATTACCAGTATTGGT+AGG 0.620581 6:-8750024 None:intergenic
ACACCTTCTTTATCACAACA+TGG 0.621958 6:-8749916 None:intergenic
GTTTCTCAACCAATAGCTAG+AGG 0.633327 6:+8751241 MsG0680030764.01.T01:CDS
GGTGCTTGTCAAGAGAAAGT+TGG 0.654275 6:+8751730 MsG0680030764.01.T01:CDS
CTAAGGCCAGGAATCAAAAG+GGG 0.665589 6:+8750589 MsG0680030764.01.T01:CDS
GCTTCAAACTGATATTCACA+TGG 0.698810 6:+8751279 MsG0680030764.01.T01:CDS
CCTTCTTTATCACAACATGG+TGG 0.736854 6:-8749913 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAATTAAAAAAAACT+AGG - Chr6:8750720-8750739 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTGTC+AGG + Chr6:8750520-8750539 MsG0680030764.01.T01:intron 10.0%
!! AAAAATTAAAAAAAACTAGG+TGG - Chr6:8750717-8750736 None:intergenic 15.0%
!!! AAAGAAATTTTGATTGTTTT+AGG + Chr6:8750257-8750276 MsG0680030764.01.T01:intron 15.0%
!!! CTTTGATTTTTTTTTTTTGA+AGG - Chr6:8750241-8750260 None:intergenic 15.0%
!! AGGAAAAATTTCTTTGATAA+TGG - Chr6:8750221-8750240 None:intergenic 20.0%
!! ATCAAAATTTCCTATGATTA+TGG - Chr6:8750349-8750368 None:intergenic 20.0%
!! ATGAAAAATAAACCTAAAGA+AGG + Chr6:8751469-8751488 MsG0680030764.01.T01:CDS 20.0%
!! GATAAAATCATTTAATAGAG+TGG - Chr6:8750066-8750085 None:intergenic 20.0%
!!! AGGAAATTTTGATTCTTTTA+AGG + Chr6:8750356-8750375 MsG0680030764.01.T01:intron 20.0%
!!! AGGAGATTTTAATTCTTTTA+AGG + Chr6:8750475-8750494 MsG0680030764.01.T01:intron 20.0%
!!! ATAATTTCACCAATATTTTC+AGG - Chr6:8751673-8751692 None:intergenic 20.0%
!!! GATTAGAAATAGTCTTTTTT+TGG + Chr6:8750284-8750303 MsG0680030764.01.T01:intron 20.0%
!!! TGAAATTAATAGTCTGTTTT+TGG + Chr6:8750152-8750171 MsG0680030764.01.T01:intron 20.0%
! ACAATGACATCAAAAACTAT+TGG + Chr6:8751137-8751156 MsG0680030764.01.T01:CDS 25.0%
! CTAGAAAAATTTGATTCAAG+TGG - Chr6:8751370-8751389 None:intergenic 25.0%
! GAAGAAAAAGCTGAAAAAAT+TGG + Chr6:8751171-8751190 MsG0680030764.01.T01:CDS 25.0%
! GATTAAGTAATTACCAGTAT+TGG - Chr6:8750031-8750050 None:intergenic 25.0%
! GTTTCTTATATTCAAGAACA+TGG + Chr6:8749979-8749998 MsG0680030764.01.T01:CDS 25.0%
! TTAGATGGACAAATTATCTA+AGG + Chr6:8750572-8750591 MsG0680030764.01.T01:CDS 25.0%
! TTTATAGAGACCATAATCAT+AGG + Chr6:8750336-8750355 MsG0680030764.01.T01:intron 25.0%
!! ACATTGATTATTGTACAGAT+GGG + Chr6:8751081-8751100 MsG0680030764.01.T01:intron 25.0%
!!! TTATTTTGAGAACTTTGTCT+AGG + Chr6:8751009-8751028 MsG0680030764.01.T01:intron 25.0%
!!! TTTTTTTGTCAGGTTTGTTA+AGG + Chr6:8750530-8750549 MsG0680030764.01.T01:intron 25.0%
AAACCTAAAGAAGGATCAAA+TGG + Chr6:8751478-8751497 MsG0680030764.01.T01:CDS 30.0%
AAATTACTTTGACATGTGCT+AGG - Chr6:8750927-8750946 None:intergenic 30.0%
ACCAAAATGATATCTTCTTC+AGG - Chr6:8749961-8749980 None:intergenic 30.0%
ACTTCTTCTGAATCATGTTT+AGG + Chr6:8751202-8751221 MsG0680030764.01.T01:CDS 30.0%
AGAGTAGTAGAATCAGAATT+TGG - Chr6:8751631-8751650 None:intergenic 30.0%
CTTTCTCAATGCTTGAAAAA+TGG + Chr6:8751695-8751714 MsG0680030764.01.T01:CDS 30.0%
GAGAGTAAACCTGAAAATAT+TGG + Chr6:8751661-8751680 MsG0680030764.01.T01:CDS 30.0%
TAAAAAAAACTAGGTGGTTG+TGG - Chr6:8750711-8750730 None:intergenic 30.0%
TCGTATTGTTAACGCAATTT+AGG - Chr6:8750836-8750855 None:intergenic 30.0%
TTACCATTTGATCCTTCTTT+AGG - Chr6:8751484-8751503 None:intergenic 30.0%
! CACATTGATTATTGTACAGA+TGG + Chr6:8751080-8751099 MsG0680030764.01.T01:intron 30.0%
! GAGACTTTTGAATCTTTGTT+TGG + Chr6:8751586-8751605 MsG0680030764.01.T01:CDS 30.0%
! GATAAAGAAGGTGTGAAAAA+AGG + Chr6:8749925-8749944 MsG0680030764.01.T01:CDS 30.0%
! GGATAATCATTTTCTCTTCT+TGG - Chr6:8750627-8750646 None:intergenic 30.0%
! TAACGCAATTTAGGTTACAT+CGG - Chr6:8750827-8750846 None:intergenic 30.0%
! TCCTGAAGAAGATATCATTT+TGG + Chr6:8749957-8749976 MsG0680030764.01.T01:CDS 30.0%
! TTTTATGAGACTATGCTCAA+AGG + Chr6:8750455-8750474 MsG0680030764.01.T01:intron 30.0%
!! AAGTAATTACCAGTATTGGT+AGG - Chr6:8750027-8750046 None:intergenic 30.0%
!!! CATTTTTCAAGCATTGAGAA+AGG - Chr6:8751697-8751716 None:intergenic 30.0%
ACACCTTCTTTATCACAACA+TGG - Chr6:8749919-8749938 None:intergenic 35.0%
ATGTCATTGTCTGTTCTTTG+TGG - Chr6:8751127-8751146 None:intergenic 35.0%
CTAGTGAAGGAATGGAAAAA+GGG + Chr6:8751542-8751561 MsG0680030764.01.T01:CDS 35.0%
GAAAAATGGCTTCTAGATGA+TGG + Chr6:8751709-8751728 MsG0680030764.01.T01:CDS 35.0%
GCTTCAAACTGATATTCACA+TGG + Chr6:8751279-8751298 MsG0680030764.01.T01:CDS 35.0%
TATATTCAAGAACATGGTCC+TGG + Chr6:8749985-8750004 MsG0680030764.01.T01:CDS 35.0%
TCGAGAATCACGATCAAATA+CGG + Chr6:8750801-8750820 MsG0680030764.01.T01:intron 35.0%
TCTAGTGAAGGAATGGAAAA+AGG + Chr6:8751541-8751560 MsG0680030764.01.T01:CDS 35.0%
TTCCTAAAAGAGCTTGAAGA+TGG - Chr6:8750648-8750667 None:intergenic 35.0%
! AACATAGCTCGTTTGTTGAA+AGG + Chr6:8751442-8751461 MsG0680030764.01.T01:CDS 35.0%
! ATCCATCTTCAAGCTCTTTT+AGG + Chr6:8750643-8750662 MsG0680030764.01.T01:CDS 35.0%
! GAAGCACTAGTCTCATAATT+TGG - Chr6:8751523-8751542 None:intergenic 35.0%
!! TTCAAGCTCTTTTAGGAAAC+AGG + Chr6:8750650-8750669 MsG0680030764.01.T01:CDS 35.0%
!!! CTACTAGAAGTGCTTTTTTC+TGG - Chr6:8751334-8751353 None:intergenic 35.0%
!!! TGCTTCACTAAGTGCTTTTT+TGG - Chr6:8751305-8751324 None:intergenic 35.0%
AAAGCTGTTCCTACCAATAC+TGG + Chr6:8750015-8750034 MsG0680030764.01.T01:CDS 40.0%
AACCAATAGCTAGAGGACAA+TGG + Chr6:8751248-8751267 MsG0680030764.01.T01:CDS 40.0%
AAGAACATGGTCCTGGAAAT+TGG + Chr6:8749992-8750011 MsG0680030764.01.T01:CDS 40.0%
AAGGTGTGAAAAAAGGACCT+TGG + Chr6:8749932-8749951 MsG0680030764.01.T01:CDS 40.0%
ACCAATAGCTAGAGGACAAT+GGG + Chr6:8751249-8751268 MsG0680030764.01.T01:CDS 40.0%
ATATCTTCTTCAGGAGTCCA+AGG - Chr6:8749952-8749971 None:intergenic 40.0%
CATTGTCTGTTCTTTGTGGA+AGG - Chr6:8751123-8751142 None:intergenic 40.0%
CCACCATGTTGTGATAAAGA+AGG + Chr6:8749913-8749932 MsG0680030764.01.T01:CDS 40.0%
CCTTCTTTATCACAACATGG+TGG - Chr6:8749916-8749935 None:intergenic 40.0%
GCACTTGATGCATAAGACAT+AGG - Chr6:8751418-8751437 None:intergenic 40.0%
GTAAGAGTTGCAGACTTAGA+TGG + Chr6:8750557-8750576 MsG0680030764.01.T01:CDS 40.0%
GTTTCTCAACCAATAGCTAG+AGG + Chr6:8751241-8751260 MsG0680030764.01.T01:CDS 40.0%
TAGTGCTTCTAGTGAAGGAA+TGG + Chr6:8751534-8751553 MsG0680030764.01.T01:CDS 40.0%
! ATCTAAGGCCAGGAATCAAA+AGG + Chr6:8750587-8750606 MsG0680030764.01.T01:CDS 40.0%
! TAGCTCGTTTGTTGAAAGGT+TGG + Chr6:8751446-8751465 MsG0680030764.01.T01:CDS 40.0%
! TCTAAGGCCAGGAATCAAAA+GGG + Chr6:8750588-8750607 MsG0680030764.01.T01:CDS 40.0%
! TGGACAAATTATCTAAGGCC+AGG + Chr6:8750577-8750596 MsG0680030764.01.T01:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG - Chr6:8750598-8750617 None:intergenic 40.0%
CTAAGGCCAGGAATCAAAAG+GGG + Chr6:8750589-8750608 MsG0680030764.01.T01:CDS 45.0%
CTAGAGGACAATGGGAAAGA+AGG + Chr6:8751257-8751276 MsG0680030764.01.T01:CDS 45.0%
GAGACTAGTGCTTCTAGTGA+AGG + Chr6:8751529-8751548 MsG0680030764.01.T01:CDS 45.0%
GGAACAGCTTTCCAATTTCC+AGG - Chr6:8750006-8750025 None:intergenic 45.0%
GGTGCTTGTCAAGAGAAAGT+TGG + Chr6:8751730-8751749 MsG0680030764.01.T01:CDS 45.0%
TCCCATTGTCCTCTAGCTAT+TGG - Chr6:8751253-8751272 None:intergenic 45.0%
! TTGTGGAAGGTATGCAGCTA+TGG - Chr6:8751110-8751129 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8749904 8751780 8749904 ID=MsG0680030764.01;Name=MsG0680030764.01
Chr6 mRNA 8749904 8751780 8749904 ID=MsG0680030764.01.T01;Parent=MsG0680030764.01;Name=MsG0680030764.01.T01;_AED=0.31;_eAED=0.37;_QI=0|0|0|1|1|1|3|0|314
Chr6 exon 8749904 8750036 8749904 ID=MsG0680030764.01.T01:exon:7214;Parent=MsG0680030764.01.T01
Chr6 exon 8750542 8750671 8750542 ID=MsG0680030764.01.T01:exon:7215;Parent=MsG0680030764.01.T01
Chr6 exon 8751099 8751780 8751099 ID=MsG0680030764.01.T01:exon:7216;Parent=MsG0680030764.01.T01
Chr6 CDS 8749904 8750036 8749904 ID=MsG0680030764.01.T01:cds;Parent=MsG0680030764.01.T01
Chr6 CDS 8750542 8750671 8750542 ID=MsG0680030764.01.T01:cds;Parent=MsG0680030764.01.T01
Chr6 CDS 8751099 8751780 8751099 ID=MsG0680030764.01.T01:cds;Parent=MsG0680030764.01.T01
Gene Sequence

>MsG0680030764.01.T01

ATGGTTAGACCACCATGTTGTGATAAAGAAGGTGTGAAAAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTTTCTTATATTCAAGAACATGGTCCTGGAAATTGGAAAGCTGTTCCTACCAATACTGGTTTGTTAAGGTGTAGTAAGAGTTGCAGACTTAGATGGACAAATTATCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGACCAAGAAGAGAAAATGATTATCCATCTTCAAGCTCTTTTAGGAAACAGATGGGCTGCCATAGCTGCATACCTTCCACAAAGAACAGACAATGACATCAAAAACTATTGGAACACTTATTTGAAGAAAAAGCTGAAAAAATTGGAAACAAGTACTTCTTCTGAATCATGTTTAGGTCATGATGAATTCTCAGTTTCTCAACCAATAGCTAGAGGACAATGGGAAAGAAGGCTTCAAACTGATATTCACATGGCCAAAAAAGCACTTAGTGAAGCACTTCAACCAGAAAAAAGCACTTCTAGTAGCAACTTAATGATACCACTTGAATCAAATTTTTCTAGTGAAAGCTCTTTTTGTTCAACAAAACCTATGTCTTATGCATCAAGTGCTGATAACATAGCTCGTTTGTTGAAAGGTTGGATGAAAAATAAACCTAAAGAAGGATCAAATGGTAATAACACATATGTGACACCAAATTATGAGACTAGTGCTTCTAGTGAAGGAATGGAAAAAGGGTCAACAAGTGTTGAATTATCTGAGACTTTTGAATCTTTGTTTGGTTATGAGTCTTTTGATTCACCAAATTCTGATTCTACTACTCTTTTTCAAGATGAGAGTAAACCTGAAAATATTGGTGAAATTATGCCTTTCTCAATGCTTGAAAAATGGCTTCTAGATGATGGTGCTTGTCAAGAGAAAGTTGGTCTTAGTGAAATTAATTACATATTTTGA

Protein sequence

>MsG0680030764.01.T01

MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLMIPLESNFSSESSFCSTKPMSYASSADNIARLLKGWMKNKPKEGSNGNNTYVTPNYETSASSEGMEKGSTSVELSETFESLFGYESFDSPNSDSTTLFQDESKPENIGEIMPFSMLEKWLLDDGACQEKVGLSEINYIF*