Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048016.01 | MsG0080049147.01 | 0.816913 | 4.326718e-52 | 3.105986e-49 |
| MsG0080048683.01 | MsG0080049147.01 | 0.805130 | 1.548802e-49 | 8.129525e-47 |
| MsG0080048748.01 | MsG0080049147.01 | 0.817295 | 3.551280e-52 | 2.576038e-49 |
| MsG0080048802.01 | MsG0080049147.01 | 0.802076 | 6.660644e-49 | 3.232728e-46 |
| MsG0080048849.01 | MsG0080049147.01 | 0.847291 | 1.269329e-59 | 2.245287e-56 |
| MsG0080049011.01 | MsG0080049147.01 | 0.804933 | 1.702809e-49 | 8.893228e-47 |
| MsG0080049068.01 | MsG0080049147.01 | 0.800694 | 1.277764e-48 | 5.988306e-46 |
| MsG0080049069.01 | MsG0080049147.01 | 0.843284 | 1.540626e-58 | 2.398884e-55 |
| MsG0080049147.01 | MsG0180000114.01 | 0.820811 | 5.630043e-53 | 4.501229e-50 |
| MsG0080049147.01 | MsG0180000355.01 | 0.807730 | 4.381531e-50 | 2.459148e-47 |
| MsG0080049147.01 | MsG0180000599.01 | 0.821466 | 3.977888e-53 | 3.238690e-50 |
| MsG0080049147.01 | MsG0180001149.01 | 0.820680 | 6.036707e-53 | 4.808347e-50 |
| MsG0080049147.01 | MsG0180001704.01 | 0.808033 | 3.778690e-50 | 2.137594e-47 |
| MsG0080049147.01 | MsG0180003189.01 | 0.820488 | 6.679792e-53 | 5.292671e-50 |
| MsG0080049147.01 | MsG0180003246.01 | -0.811684 | 6.190198e-51 | 3.856518e-48 |
| MsG0080049147.01 | MsG0180003353.01 | 0.805472 | 1.312958e-49 | 6.952289e-47 |
| MsG0080049147.01 | MsG0180003697.01 | 0.825763 | 3.924760e-54 | 3.610784e-51 |
| MsG0080049147.01 | MsG0180003821.01 | 0.816203 | 6.241433e-52 | 4.394393e-49 |
| MsG0080049147.01 | MsG0180004025.01 | 0.865218 | 6.925417e-65 | 2.235719e-61 |
| MsG0080049147.01 | MsG0180004390.01 | 0.819819 | 9.505886e-53 | 7.393475e-50 |
| MsG0080049147.01 | MsG0180004493.01 | 0.831520 | 1.593560e-55 | 1.733544e-52 |
| MsG0080049147.01 | MsG0180004765.01 | 0.808178 | 3.519227e-50 | 1.998579e-47 |
| MsG0080049147.01 | MsG0180005169.01 | 0.800102 | 1.687355e-48 | 7.789905e-46 |
| MsG0080049147.01 | MsG0180005240.01 | 0.813621 | 2.332984e-51 | 1.531145e-48 |
| MsG0080049147.01 | MsG0180005303.01 | -0.808853 | 2.525765e-50 | 1.459896e-47 |
| MsG0080049147.01 | MsG0180005509.01 | 0.802705 | 4.941627e-49 | 2.437248e-46 |
| MsG0080049147.01 | MsG0180005964.01 | 0.806082 | 9.778479e-50 | 5.259506e-47 |
| MsG0080049147.01 | MsG0180006096.01 | 0.857844 | 1.237736e-62 | 3.096799e-59 |
| MsG0080049147.01 | MsG0180006144.01 | 0.820953 | 5.224032e-53 | 4.193440e-50 |
| MsG0080049147.01 | MsG0280006588.01 | 0.814174 | 1.762125e-51 | 1.173913e-48 |
| MsG0080049147.01 | MsG0280006914.01 | 0.803165 | 3.969922e-49 | 1.981073e-46 |
| MsG0080049147.01 | MsG0280007165.01 | -0.807345 | 5.290578e-50 | 2.939603e-47 |
| MsG0080049147.01 | MsG0280007575.01 | 0.800372 | 1.486788e-48 | 6.911481e-46 |
| MsG0080049147.01 | MsG0280007647.01 | 0.806011 | 1.011785e-49 | 5.432437e-47 |
| MsG0080049147.01 | MsG0280007903.01 | 0.807316 | 5.364932e-50 | 2.978817e-47 |
| MsG0080049147.01 | MsG0280008113.01 | 0.812334 | 4.467558e-51 | 2.832794e-48 |
| MsG0080049147.01 | MsG0280008928.01 | 0.851614 | 7.913257e-61 | 1.610698e-57 |
| MsG0080049147.01 | MsG0280008929.01 | 0.864366 | 1.280117e-64 | 4.009004e-61 |
| MsG0080049147.01 | MsG0280009256.01 | 0.839824 | 1.257360e-57 | 1.757175e-54 |
| MsG0080049147.01 | MsG0280009685.01 | 0.809449 | 1.881610e-50 | 1.105059e-47 |
| MsG0080049147.01 | MsG0280010216.01 | 0.810464 | 1.137999e-50 | 6.864314e-48 |
| MsG0080049147.01 | MsG0280010288.01 | 0.835728 | 1.417263e-56 | 1.748267e-53 |
| MsG0080049147.01 | MsG0280010378.01 | 0.809412 | 1.916452e-50 | 1.124482e-47 |
| MsG0080049147.01 | MsG0280010564.01 | 0.812938 | 3.294606e-51 | 2.122500e-48 |
| MsG0080049147.01 | MsG0280010916.01 | 0.814912 | 1.209813e-51 | 8.221750e-49 |
| MsG0080049147.01 | MsG0280011059.01 | -0.805470 | 1.314717e-49 | 6.961212e-47 |
| MsG0080049147.01 | MsG0280011073.01 | 0.844221 | 8.647935e-59 | 1.386709e-55 |
| MsG0080049147.01 | MsG0280011255.01 | 0.823022 | 1.732375e-53 | 1.474308e-50 |
| MsG0080049147.01 | MsG0280011272.01 | -0.815109 | 1.094253e-51 | 7.476180e-49 |
| MsG0080049147.01 | MsG0280011304.01 | 0.821872 | 3.204294e-53 | 2.639095e-50 |
| MsG0080049147.01 | MsG0280011371.01 | 0.805670 | 1.193480e-49 | 6.351968e-47 |
| MsG0080049147.01 | MsG0280011376.01 | 0.845712 | 3.422175e-59 | 5.754505e-56 |
| MsG0080049147.01 | MsG0380012005.01 | 0.860794 | 1.611237e-63 | 4.458895e-60 |
| MsG0080049147.01 | MsG0380012184.01 | 0.801454 | 8.936197e-49 | 4.269315e-46 |
| MsG0080049147.01 | MsG0380012394.01 | 0.805017 | 1.635491e-49 | 8.559371e-47 |
| MsG0080049147.01 | MsG0380013467.01 | 0.830235 | 3.291778e-55 | 3.448068e-52 |
| MsG0080049147.01 | MsG0380013853.01 | 0.884887 | 1.306095e-71 | 8.769661e-68 |
| MsG0080049147.01 | MsG0380014727.01 | 0.862496 | 4.863410e-64 | 1.427280e-60 |
| MsG0080049147.01 | MsG0380014866.01 | 0.809054 | 2.286996e-50 | 1.329052e-47 |
| MsG0080049147.01 | MsG0380015066.01 | -0.811326 | 7.403277e-51 | 4.568898e-48 |
| MsG0080049147.01 | MsG0380015166.01 | 0.819257 | 1.277248e-52 | 9.779371e-50 |
| MsG0080049147.01 | MsG0380015372.01 | 0.811272 | 7.606361e-51 | 4.687693e-48 |
| MsG0080049147.01 | MsG0380015533.01 | 0.830967 | 2.179184e-55 | 2.332005e-52 |
| MsG0080049147.01 | MsG0380015829.01 | 0.815277 | 1.003747e-51 | 6.889925e-49 |
| MsG0080049147.01 | MsG0380015847.01 | -0.803119 | 4.058017e-49 | 2.022553e-46 |
| MsG0080049147.01 | MsG0380016182.01 | 0.824060 | 9.903657e-54 | 8.677905e-51 |
| MsG0080049147.01 | MsG0380016191.01 | -0.858507 | 7.855525e-63 | 2.009521e-59 |
| MsG0080049147.01 | MsG0380016347.01 | -0.816250 | 6.093494e-52 | 4.295687e-49 |
| MsG0080049147.01 | MsG0380016671.01 | 0.807073 | 6.040207e-50 | 3.332418e-47 |
| MsG0080049147.01 | MsG0380016740.01 | 0.856793 | 2.529815e-62 | 6.108030e-59 |
| MsG0080049147.01 | MsG0380016820.01 | 0.805652 | 1.203696e-49 | 6.403461e-47 |
| MsG0080049147.01 | MsG0380017023.01 | 0.836747 | 7.805438e-57 | 9.928621e-54 |
| MsG0080049147.01 | MsG0380017085.01 | 0.884505 | 1.811376e-71 | 1.197987e-67 |
| MsG0080049147.01 | MsG0380017126.01 | 0.807365 | 5.237826e-50 | 2.911825e-47 |
| MsG0080049147.01 | MsG0380017178.01 | -0.802456 | 5.563620e-49 | 2.726593e-46 |
| MsG0080049147.01 | MsG0380017198.01 | 0.819041 | 1.430410e-52 | 1.088752e-49 |
| MsG0080049147.01 | MsG0380017263.01 | -0.812038 | 5.183731e-51 | 3.260211e-48 |
| MsG0080049147.01 | MsG0380017293.01 | 0.808014 | 3.813840e-50 | 2.156408e-47 |
| MsG0080049147.01 | MsG0380017322.01 | 0.805939 | 1.047578e-49 | 5.614283e-47 |
| MsG0080049147.01 | MsG0380017338.01 | 0.829809 | 4.182813e-55 | 4.328376e-52 |
| MsG0080049147.01 | MsG0380017437.01 | -0.808660 | 2.777064e-50 | 1.597018e-47 |
| MsG0080049147.01 | MsG0380017931.01 | 0.832632 | 8.463961e-56 | 9.515045e-53 |
| MsG0080049147.01 | MsG0380018022.01 | 0.816473 | 5.432354e-52 | 3.852797e-49 |
| MsG0080049147.01 | MsG0480018402.01 | 0.862286 | 5.644130e-64 | 1.644072e-60 |
| MsG0080049147.01 | MsG0480018847.01 | 0.803200 | 3.904395e-49 | 1.950082e-46 |
| MsG0080049147.01 | MsG0480018911.01 | 0.883389 | 4.674853e-71 | 2.957687e-67 |
| MsG0080049147.01 | MsG0480019384.01 | 0.836240 | 1.050821e-56 | 1.316627e-53 |
| MsG0080049147.01 | MsG0480019408.01 | 0.805782 | 1.130347e-49 | 6.033464e-47 |
| MsG0080049147.01 | MsG0480020024.01 | 0.857732 | 1.335911e-62 | 3.329882e-59 |
| MsG0080049147.01 | MsG0480020025.01 | 0.811497 | 6.798255e-51 | 4.214864e-48 |
| MsG0080049147.01 | MsG0480020887.01 | 0.817062 | 4.006626e-52 | 2.888025e-49 |
| MsG0080049147.01 | MsG0480021201.01 | 0.801370 | 9.298121e-49 | 4.432920e-46 |
| MsG0080049147.01 | MsG0480021280.01 | 0.809302 | 2.024031e-50 | 1.184070e-47 |
| MsG0080049147.01 | MsG0480021768.01 | 0.829810 | 4.178586e-55 | 4.324206e-52 |
| MsG0080049147.01 | MsG0480021776.01 | -0.848012 | 8.037973e-60 | 1.454839e-56 |
| MsG0080049147.01 | MsG0480021869.01 | 0.816702 | 4.826474e-52 | 3.444639e-49 |
| MsG0080049147.01 | MsG0480022239.01 | 0.812189 | 4.804171e-51 | 3.034223e-48 |
| MsG0080049147.01 | MsG0480022245.01 | 0.817502 | 3.189158e-52 | 2.326685e-49 |
| MsG0080049147.01 | MsG0480022248.01 | 0.804896 | 1.733007e-49 | 9.042822e-47 |
| MsG0080049147.01 | MsG0480022535.01 | 0.807494 | 4.919291e-50 | 2.744011e-47 |
| MsG0080049147.01 | MsG0480023073.01 | 0.843945 | 1.025093e-58 | 1.629701e-55 |
| MsG0080049147.01 | MsG0480023162.01 | 0.817747 | 2.809037e-52 | 2.063184e-49 |
| MsG0080049147.01 | MsG0480023251.01 | 0.807539 | 4.811500e-50 | 2.686943e-47 |
| MsG0080049147.01 | MsG0480023261.01 | 0.811270 | 7.615939e-51 | 4.693303e-48 |
| MsG0080049147.01 | MsG0480023384.01 | 0.808866 | 2.508590e-50 | 1.450534e-47 |
| MsG0080049147.01 | MsG0480023448.01 | 0.812077 | 5.082338e-51 | 3.200065e-48 |
| MsG0080049147.01 | MsG0480023638.01 | 0.802251 | 6.128863e-49 | 2.988048e-46 |
| MsG0080049147.01 | MsG0480023652.01 | 0.831598 | 1.524343e-55 | 1.662206e-52 |
| MsG0080049147.01 | MsG0480023660.01 | 0.815431 | 9.278013e-52 | 6.395534e-49 |
| MsG0080049147.01 | MsG0480024030.01 | 0.802701 | 4.952305e-49 | 2.442219e-46 |
| MsG0080049147.01 | MsG0580024495.01 | 0.803781 | 2.959846e-49 | 1.500545e-46 |
| MsG0080049147.01 | MsG0580025467.01 | 0.805230 | 1.475760e-49 | 7.765816e-47 |
| MsG0080049147.01 | MsG0580025627.01 | 0.809479 | 1.854373e-50 | 1.089925e-47 |
| MsG0080049147.01 | MsG0580026511.01 | 0.810351 | 1.203677e-50 | 7.238826e-48 |
| MsG0080049147.01 | MsG0580027103.01 | 0.849774 | 2.605474e-60 | 4.993595e-57 |
| MsG0080049147.01 | MsG0580028551.01 | 0.810351 | 1.203681e-50 | 7.238838e-48 |
| MsG0080049147.01 | MsG0580028630.01 | 0.822446 | 2.359136e-53 | 1.975096e-50 |
| MsG0080049147.01 | MsG0580029549.01 | 0.810113 | 1.354346e-50 | 8.094808e-48 |
| MsG0080049147.01 | MsG0580029734.01 | 0.804689 | 1.914903e-49 | 9.937663e-47 |
| MsG0080049147.01 | MsG0580029879.01 | 0.858296 | 9.083061e-63 | 2.307388e-59 |
| MsG0080049147.01 | MsG0580029914.01 | 0.806859 | 6.702015e-50 | 3.677338e-47 |
| MsG0080049147.01 | MsG0580029919.01 | 0.801910 | 7.203889e-49 | 3.481753e-46 |
| MsG0080049147.01 | MsG0680030515.01 | 0.842065 | 3.245742e-58 | 4.863691e-55 |
| MsG0080049147.01 | MsG0680030555.01 | 0.874673 | 5.618421e-68 | 2.550980e-64 |
| MsG0080049147.01 | MsG0680030636.01 | 0.841374 | 4.939066e-58 | 7.243038e-55 |
| MsG0080049147.01 | MsG0680030764.01 | 0.809790 | 1.590010e-50 | 9.423325e-48 |
| MsG0080049147.01 | MsG0680030992.01 | 0.872631 | 2.742571e-67 | 1.155819e-63 |
| MsG0080049147.01 | MsG0680031334.01 | 0.805273 | 1.445347e-49 | 7.614121e-47 |
| MsG0080049147.01 | MsG0680031939.01 | 0.812185 | 4.813875e-51 | 3.040010e-48 |
| MsG0080049147.01 | MsG0680032058.01 | 0.835594 | 1.531962e-56 | 1.882067e-53 |
| MsG0080049147.01 | MsG0680032516.01 | 0.805321 | 1.412592e-49 | 7.450903e-47 |
| MsG0080049147.01 | MsG0680032827.01 | 0.822586 | 2.188191e-53 | 1.839439e-50 |
| MsG0080049147.01 | MsG0680033459.01 | 0.830536 | 2.778264e-55 | 2.935407e-52 |
| MsG0080049147.01 | MsG0680033465.01 | 0.802715 | 4.918262e-49 | 2.426360e-46 |
| MsG0080049147.01 | MsG0680034235.01 | 0.815687 | 8.138208e-52 | 5.649494e-49 |
| MsG0080049147.01 | MsG0680035859.01 | 0.800554 | 1.365064e-48 | 6.374797e-46 |
| MsG0080049147.01 | MsG0780035937.01 | 0.807038 | 6.144909e-50 | 3.387192e-47 |
| MsG0080049147.01 | MsG0780035960.01 | 0.841433 | 4.767580e-58 | 7.004627e-55 |
| MsG0080049147.01 | MsG0780036117.01 | 0.801853 | 7.399563e-49 | 3.571224e-46 |
| MsG0080049147.01 | MsG0780036659.01 | 0.810167 | 1.319004e-50 | 7.894235e-48 |
| MsG0080049147.01 | MsG0780036880.01 | 0.813402 | 2.606783e-51 | 1.700740e-48 |
| MsG0080049147.01 | MsG0780036978.01 | 0.861366 | 1.079485e-63 | 3.047441e-60 |
| MsG0080049147.01 | MsG0780037082.01 | 0.831186 | 1.925442e-55 | 2.073820e-52 |
| MsG0080049147.01 | MsG0780037330.01 | 0.839931 | 1.179351e-57 | 1.653718e-54 |
| MsG0080049147.01 | MsG0780037399.01 | 0.806730 | 7.136793e-50 | 3.902752e-47 |
| MsG0080049147.01 | MsG0780037701.01 | 0.840695 | 7.445915e-58 | 1.069128e-54 |
| MsG0080049147.01 | MsG0780038309.01 | -0.810804 | 9.609378e-51 | 5.849226e-48 |
| MsG0080049147.01 | MsG0780038473.01 | -0.811796 | 5.852139e-51 | 3.656894e-48 |
| MsG0080049147.01 | MsG0780038833.01 | 0.805570 | 1.252248e-49 | 6.647503e-47 |
| MsG0080049147.01 | MsG0780038907.01 | 0.821544 | 3.817208e-53 | 3.114741e-50 |
| MsG0080049147.01 | MsG0780039438.01 | 0.834096 | 3.650933e-56 | 4.288427e-53 |
| MsG0080049147.01 | MsG0780039964.01 | 0.814193 | 1.744810e-51 | 1.162996e-48 |
| MsG0080049147.01 | MsG0780040566.01 | -0.814194 | 1.744168e-51 | 1.162592e-48 |
| MsG0080049147.01 | MsG0780040576.01 | -0.809650 | 1.703997e-50 | 1.006163e-47 |
| MsG0080049147.01 | MsG0780040596.01 | 0.808190 | 3.498119e-50 | 1.987231e-47 |
| MsG0080049147.01 | MsG0780040794.01 | 0.834957 | 2.219052e-56 | 2.674822e-53 |
| MsG0080049147.01 | MsG0780041387.01 | 0.804812 | 1.804813e-49 | 9.396600e-47 |
| MsG0080049147.01 | MsG0780041729.01 | -0.826632 | 2.439067e-54 | 2.300027e-51 |
| MsG0080049147.01 | MsG0780041747.01 | 0.861355 | 1.087761e-63 | 3.069543e-60 |
| MsG0080049147.01 | MsG0880041852.01 | 0.819113 | 1.377009e-52 | 1.050160e-49 |
| MsG0080049147.01 | MsG0880041999.01 | 0.813014 | 3.171440e-51 | 2.047354e-48 |
| MsG0080049147.01 | MsG0880042022.01 | 0.837461 | 5.129027e-57 | 6.667229e-54 |
| MsG0080049147.01 | MsG0880042062.01 | 0.806679 | 7.317457e-50 | 3.996080e-47 |
| MsG0080049147.01 | MsG0880042276.01 | 0.802628 | 5.126640e-49 | 2.523442e-46 |
| MsG0080049147.01 | MsG0880042622.01 | 0.835474 | 1.643166e-56 | 2.011448e-53 |
| MsG0080049147.01 | MsG0880042700.01 | 0.829084 | 6.272023e-55 | 6.352614e-52 |
| MsG0080049147.01 | MsG0880042857.01 | 0.806316 | 8.728024e-50 | 4.722578e-47 |
| MsG0080049147.01 | MsG0880042948.01 | 0.801546 | 8.555849e-49 | 4.097054e-46 |
| MsG0080049147.01 | MsG0880042987.01 | -0.809637 | 1.714649e-50 | 1.012141e-47 |
| MsG0080049147.01 | MsG0880043829.01 | 0.805630 | 1.216438e-49 | 6.467552e-47 |
| MsG0080049147.01 | MsG0880044389.01 | -0.801177 | 1.018213e-48 | 4.830797e-46 |
| MsG0080049147.01 | MsG0880045765.01 | 0.829163 | 6.001844e-55 | 6.093671e-52 |
| MsG0080049147.01 | MsG0880045926.01 | 0.800687 | 1.282345e-48 | 6.008648e-46 |
| MsG0080049147.01 | MsG0880045992.01 | 0.842562 | 2.397674e-58 | 3.649670e-55 |
| MsG0080049147.01 | MsG0880046809.01 | 0.829992 | 3.774164e-55 | 3.925535e-52 |
| MsG0080049147.01 | MsG0880047052.01 | 0.804698 | 1.906140e-49 | 9.894443e-47 |
| MsG0080049147.01 | MsG0880047152.01 | 0.826639 | 2.428962e-54 | 2.291026e-51 |
| MsG0080049147.01 | MsG0880047267.01 | 0.833560 | 4.971246e-56 | 5.746097e-53 |
| MsG0080049147.01 | MsG0880047481.01 | -0.815256 | 1.014806e-51 | 6.961352e-49 |
| MsG0080049147.01 | MsG0880047696.01 | 0.818491 | 1.906496e-52 | 1.429205e-49 |
| MsG0080049147.01 | MsG0880047703.01 | 0.830720 | 2.505494e-55 | 2.661803e-52 |
| MsG0080049147.01 | MsG0880047763.01 | 0.821162 | 4.675427e-53 | 3.774661e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTAATTATAACCTATTT+AGG | - | contig94end:1007-1026 | None:intergenic | 15.0% |
| !! | TGAAAATGATATTAAAAAGT+TGG | + | contig94end:1200-1219 | MsG0080049147.01.T01:intron | 15.0% |
| !!! | AAAAAGTATTAATTTGGAAT+AGG | + | contig94end:226-245 | MsG0080049147.01.T01:CDS | 15.0% |
| !!! | AATACAATCTTCATTTTTTA+AGG | - | contig94end:1163-1182 | None:intergenic | 15.0% |
| !!! | AATTAATACTTTTTTCAAAC+TGG | - | contig94end:220-239 | None:intergenic | 15.0% |
| !!! | ATTAATACTTTTTTCAAACT+GGG | - | contig94end:219-238 | None:intergenic | 15.0% |
| !!! | GTTTGAAAAAAGTATTAATT+TGG | + | contig94end:220-239 | MsG0080049147.01.T01:CDS | 15.0% |
| !!! | AAAAATGAGCTTTAATCAAA+TGG | - | contig94end:188-207 | None:intergenic | 20.0% |
| !!! | AAAATGAGCTTTAATCAAAT+GGG | - | contig94end:187-206 | None:intergenic | 20.0% |
| ! | GATATTAAAAAGTTGGAGAT+GGG | + | contig94end:1207-1226 | MsG0080049147.01.T01:intron | 25.0% |
| ! | TGATATTAAAAAGTTGGAGA+TGG | + | contig94end:1206-1225 | MsG0080049147.01.T01:intron | 25.0% |
| ! | TTATGCTTAATAGTTCCATA+AGG | + | contig94end:762-781 | MsG0080049147.01.T01:intron | 25.0% |
| ! | TTATTAGAGGTGATAAAGTT+GGG | + | contig94end:607-626 | MsG0080049147.01.T01:intron | 25.0% |
| ! | TTCTAAGTATTTATCTAGAG+AGG | + | contig94end:119-138 | MsG0080049147.01.T01:CDS | 25.0% |
| !! | AAATGAGCTTTAATCAAATG+GGG | - | contig94end:186-205 | None:intergenic | 25.0% |
| !! | TTTTTGTGCATCATCTAATT+TGG | + | contig94end:836-855 | MsG0080049147.01.T01:intron | 25.0% |
| AAACACAAGAGGTTCTATAA+AGG | - | contig94end:89-108 | None:intergenic | 30.0% | |
| AAACCAACTTGAAAACCTTA+TGG | - | contig94end:780-799 | None:intergenic | 30.0% | |
| AACACAAGAGGTTCTATAAA+GGG | - | contig94end:88-107 | None:intergenic | 30.0% | |
| CTTATTAGAGGTGATAAAGT+TGG | + | contig94end:606-625 | MsG0080049147.01.T01:intron | 30.0% | |
| GAAAAGTTAGGCAAAAAGAT+TGG | + | contig94end:1241-1260 | MsG0080049147.01.T01:intron | 30.0% | |
| GTTAGTAAAGAGCTTATGTT+TGG | + | contig94end:1459-1478 | MsG0080049147.01.T01:intron | 30.0% | |
| TATAATTGTGAGATGAGTCT+GGG | + | contig94end:1056-1075 | MsG0080049147.01.T01:intron | 30.0% | |
| TTATAATTGTGAGATGAGTC+TGG | + | contig94end:1055-1074 | MsG0080049147.01.T01:intron | 30.0% | |
| TTGTTTATGAGACATACACA+AGG | + | contig94end:702-721 | MsG0080049147.01.T01:intron | 30.0% | |
| ! | GAAAGTTTTTGTTGACAATG+AGG | + | contig94end:498-517 | MsG0080049147.01.T01:CDS | 30.0% |
| ! | GTTCTTTTCAATTCAACAAC+TGG | + | contig94end:27-46 | MsG0080049147.01.T01:CDS | 30.0% |
| ! | TAATTTGGACTAGAAGAGTT+TGG | + | contig94end:851-870 | MsG0080049147.01.T01:intron | 30.0% |
| ! | TAGCTTGGAAACATTCTTTT+GGG | + | contig94end:1264-1283 | MsG0080049147.01.T01:CDS | 30.0% |
| !! | GTATGGTTTTCTGAAAAGTT+AGG | + | contig94end:1229-1248 | MsG0080049147.01.T01:intron | 30.0% |
| !! | TTAAAGCTCATTTTTCAGCT+AGG | + | contig94end:193-212 | MsG0080049147.01.T01:CDS | 30.0% |
| !!! | ATTACTGTTTTCAAGTCTGT+TGG | + | contig94end:648-667 | MsG0080049147.01.T01:intron | 30.0% |
| !!! | GAGATAATGGGATTGATTTT+TGG | - | contig94end:1648-1667 | None:intergenic | 30.0% |
| AGTTGAAAAGGCGAAAACTT+TGG | + | contig94end:251-270 | MsG0080049147.01.T01:CDS | 35.0% | |
| ATAATGCAATGCGCCTAAAT+AGG | + | contig94end:991-1010 | MsG0080049147.01.T01:intron | 35.0% | |
| ATAATTGTGAGATGAGTCTG+GGG | + | contig94end:1057-1076 | MsG0080049147.01.T01:intron | 35.0% | |
| ATGAGGAGTTACTTGTACTA+GGG | + | contig94end:806-825 | MsG0080049147.01.T01:intron | 35.0% | |
| GGATAGTGAGATTCTTGTTA+TGG | + | contig94end:140-159 | MsG0080049147.01.T01:CDS | 35.0% | |
| GTAAAGAGCTTATGTTTGGA+TGG | + | contig94end:1463-1482 | MsG0080049147.01.T01:intron | 35.0% | |
| GTGATCAAGGAAGATGAATT+GGG | + | contig94end:568-587 | MsG0080049147.01.T01:intron | 35.0% | |
| TAAAAAGTTGGAGATGGGTA+TGG | + | contig94end:1212-1231 | MsG0080049147.01.T01:intron | 35.0% | |
| TAGGGTATGCTAGAGATAAT+GGG | - | contig94end:1660-1679 | None:intergenic | 35.0% | |
| TATAGAACCTCTTGTGTTTC+TGG | + | contig94end:90-109 | MsG0080049147.01.T01:CDS | 35.0% | |
| TCTATAAAGGGTAAGTTCAG+TGG | - | contig94end:76-95 | None:intergenic | 35.0% | |
| TGATCAAGGAAGATGAATTG+GGG | + | contig94end:569-588 | MsG0080049147.01.T01:intron | 35.0% | |
| TGTGATCAAGGAAGATGAAT+TGG | + | contig94end:567-586 | MsG0080049147.01.T01:intron | 35.0% | |
| TTAGGGTATGCTAGAGATAA+TGG | - | contig94end:1661-1680 | None:intergenic | 35.0% | |
| TTGGAATAGGACAGTTGAAA+AGG | + | contig94end:239-258 | MsG0080049147.01.T01:CDS | 35.0% | |
| ! | AGTGAGATTCTTGTTATGGT+TGG | + | contig94end:144-163 | MsG0080049147.01.T01:CDS | 35.0% |
| ! | GATGGATTTGTGCCAAAATT+TGG | - | contig94end:1805-1824 | None:intergenic | 35.0% |
| ! | GTAGCTTGGAAACATTCTTT+TGG | + | contig94end:1263-1282 | MsG0080049147.01.T01:CDS | 35.0% |
| ! | GTCTTTTAAGCATTCGATGA+AGG | + | contig94end:447-466 | MsG0080049147.01.T01:intron | 35.0% |
| !! | AACTTGTTGGAGCTTATTAG+AGG | + | contig94end:594-613 | MsG0080049147.01.T01:intron | 35.0% |
| !!! | GTTCCATAAGGTTTTCAAGT+TGG | + | contig94end:774-793 | MsG0080049147.01.T01:intron | 35.0% |
| AAGAGCTTATGTTTGGATGG+AGG | + | contig94end:1466-1485 | MsG0080049147.01.T01:intron | 40.0% | |
| ACACAACCTCCACATAACTT+AGG | - | contig94end:1679-1698 | None:intergenic | 40.0% | |
| AGAGCTTATGTTTGGATGGA+GGG | + | contig94end:1467-1486 | MsG0080049147.01.T01:intron | 40.0% | |
| AGTCAGAGACTTGAAACAGT+TGG | + | contig94end:1367-1386 | MsG0080049147.01.T01:CDS | 40.0% | |
| AGTGGAATCCATAGAAGCTA+GGG | - | contig94end:58-77 | None:intergenic | 40.0% | |
| ATCAAGGAAGATGAATTGGG+GGG | + | contig94end:571-590 | MsG0080049147.01.T01:intron | 40.0% | |
| CACAACCTCCACATAACTTA+GGG | - | contig94end:1678-1697 | None:intergenic | 40.0% | |
| CTAGCATACCCTAAGTTATG+TGG | + | contig94end:1667-1686 | MsG0080049147.01.T01:intron | 40.0% | |
| GATCAAGGAAGATGAATTGG+GGG | + | contig94end:570-589 | MsG0080049147.01.T01:intron | 40.0% | |
| GATGAGGAGTTACTTGTACT+AGG | + | contig94end:805-824 | MsG0080049147.01.T01:intron | 40.0% | |
| GGTTTCAGTACTTGCAAAAG+AGG | + | contig94end:1079-1098 | MsG0080049147.01.T01:intron | 40.0% | |
| TAATTGTGAGATGAGTCTGG+GGG | + | contig94end:1058-1077 | MsG0080049147.01.T01:intron | 40.0% | |
| TGAGACATACACAAGGACAT+AGG | + | contig94end:709-728 | MsG0080049147.01.T01:intron | 40.0% | |
| TGGATGAGGTTGTTGGATTT+GGG | + | contig94end:340-359 | MsG0080049147.01.T01:intron | 40.0% | |
| TGTGAATGAGCAGGATAACT+GGG | + | contig94end:1696-1715 | MsG0080049147.01.T01:intron | 40.0% | |
| TTCTGCTGTTGTTGATATGC+TGG | + | contig94end:671-690 | MsG0080049147.01.T01:intron | 40.0% | |
| TTGGATGAGGTTGTTGGATT+TGG | + | contig94end:339-358 | MsG0080049147.01.T01:intron | 40.0% | |
| ! | ACTTGAAACAGTTGGTTCAG+GGG | + | contig94end:1375-1394 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | AGACTTGAAACAGTTGGTTC+AGG | + | contig94end:1373-1392 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | AGAGGCTTTTAAACTCCTAG+TGG | + | contig94end:1756-1775 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | AGCGATGAATTTTCGCTTTC+AGG | + | contig94end:291-310 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | AGGCAAAAAGATTGGTAGCT+TGG | + | contig94end:1249-1268 | MsG0080049147.01.T01:intron | 40.0% |
| ! | ATTCTTGTTATGGTTGGTGC+TGG | + | contig94end:150-169 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | CTTGGAAACATTCTTTTGGG+AGG | + | contig94end:1267-1286 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | GACTTGAAACAGTTGGTTCA+GGG | + | contig94end:1374-1393 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | GAGGCTTTTAAACTCCTAGT+GGG | + | contig94end:1757-1776 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | GCGATGAATTTTCGCTTTCA+GGG | + | contig94end:292-311 | MsG0080049147.01.T01:CDS | 40.0% |
| ! | TGTGAGCTGTGCTACTAATT+CGG | + | contig94end:367-386 | MsG0080049147.01.T01:intron | 40.0% |
| ! | TTCTTGTTATGGTTGGTGCT+GGG | + | contig94end:151-170 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | AACCTCTTGTGTTTCTGGTT+TGG | + | contig94end:95-114 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | ATGATGAGGCTTTGAAAAGG+GGG | + | contig94end:476-495 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | CAAGTTGGTTTGATGAGATG+AGG | + | contig94end:789-808 | MsG0080049147.01.T01:intron | 40.0% |
| !! | CGATGATGAGGCTTTGAAAA+GGG | + | contig94end:474-493 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | CTTTCAGGGTTGAGTTTTGA+GGG | + | contig94end:306-325 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | GATGATGAGGCTTTGAAAAG+GGG | + | contig94end:475-494 | MsG0080049147.01.T01:CDS | 40.0% |
| !! | TTTTGAAAGGGGTGTGATCA+AGG | + | contig94end:555-574 | MsG0080049147.01.T01:intron | 40.0% |
| !! | TTTTGAGGGTTGTGGGAATT+TGG | + | contig94end:320-339 | MsG0080049147.01.T01:CDS | 40.0% |
| ACATAGCTACCTTGAACACC+TGG | - | contig94end:9-28 | None:intergenic | 45.0% | |
| AGCCAAACCAGAAACACAAG+AGG | - | contig94end:100-119 | None:intergenic | 45.0% | |
| AGCTGAGTATTCACTGACAG+AGG | + | contig94end:1738-1757 | MsG0080049147.01.T01:CDS | 45.0% | |
| AGGGGTGGATGACATTGAAT+TGG | + | contig94end:1393-1412 | MsG0080049147.01.T01:CDS | 45.0% | |
| AGTTGGGAGAAGCAGTTTAG+AGG | + | contig94end:623-642 | MsG0080049147.01.T01:intron | 45.0% | |
| ATGAATTGGGGGGAACTTGT+TGG | + | contig94end:581-600 | MsG0080049147.01.T01:intron | 45.0% | |
| CAGTGGAATCCATAGAAGCT+AGG | - | contig94end:59-78 | None:intergenic | 45.0% | |
| CATTGAATTGGCAGTGCAGA+AGG | + | contig94end:1405-1424 | MsG0080049147.01.T01:intron | 45.0% | |
| GAGCTTATGTTTGGATGGAG+GGG | + | contig94end:1468-1487 | MsG0080049147.01.T01:intron | 45.0% | |
| GATGAAGGAATGCGATGATG+AGG | + | contig94end:462-481 | MsG0080049147.01.T01:CDS | 45.0% | |
| GCAGAAGGAGTTTATTCCGT+GGG | + | contig94end:1420-1439 | MsG0080049147.01.T01:intron | 45.0% | |
| GCATACCCTAAGTTATGTGG+AGG | + | contig94end:1670-1689 | MsG0080049147.01.T01:intron | 45.0% | |
| GGGAATTTGGATGAGGTTGT+TGG | + | contig94end:333-352 | MsG0080049147.01.T01:intron | 45.0% | |
| GGTTGGAGCTCATTTGGATT+TGG | + | contig94end:421-440 | MsG0080049147.01.T01:intron | 45.0% | |
| GTGTGAATGAGCAGGATAAC+TGG | + | contig94end:1695-1714 | MsG0080049147.01.T01:intron | 45.0% | |
| GTTGAAGGTTGGAGCTCATT+TGG | + | contig94end:415-434 | MsG0080049147.01.T01:intron | 45.0% | |
| TCATGCAATATGTCCTCCCA+CGG | - | contig94end:1439-1458 | None:intergenic | 45.0% | |
| TGCAGAAGGAGTTTATTCCG+TGG | + | contig94end:1419-1438 | MsG0080049147.01.T01:intron | 45.0% | |
| TGGTCAAACCCTAGCTTCTA+TGG | + | contig94end:47-66 | MsG0080049147.01.T01:CDS | 45.0% | |
| TGTTGACAATGAGGCTGCAT+TGG | + | contig94end:507-526 | MsG0080049147.01.T01:CDS | 45.0% | |
| TTATGTTTGGATGGAGGGGA+GGG | + | contig94end:1472-1491 | MsG0080049147.01.T01:intron | 45.0% | |
| ! | AGCTTGTGGGTGCTTTTGAA+AGG | + | contig94end:542-561 | MsG0080049147.01.T01:CDS | 45.0% |
| ! | CGAGAGGAGCTTCCAAATTT+TGG | + | contig94end:1790-1809 | MsG0080049147.01.T01:CDS | 45.0% |
| ! | GCTTTCAGGGTTGAGTTTTG+AGG | + | contig94end:305-324 | MsG0080049147.01.T01:CDS | 45.0% |
| ! | GGAGCTCATTTGGATTTGGT+TGG | + | contig94end:425-444 | MsG0080049147.01.T01:intron | 45.0% |
| !! | CTTGTGGGTGCTTTTGAAAG+GGG | + | contig94end:544-563 | MsG0080049147.01.T01:CDS | 45.0% |
| !! | GCGATGATGAGGCTTTGAAA+AGG | + | contig94end:473-492 | MsG0080049147.01.T01:CDS | 45.0% |
| !! | GCTTGTGGGTGCTTTTGAAA+GGG | + | contig94end:543-562 | MsG0080049147.01.T01:CDS | 45.0% |
| !! | TCTTGTTATGGTTGGTGCTG+GGG | + | contig94end:152-171 | MsG0080049147.01.T01:CDS | 45.0% |
| !!! | GGTTGAGTTTTGAGGGTTGT+GGG | + | contig94end:313-332 | MsG0080049147.01.T01:CDS | 45.0% |
| AAGGGTGAGAGGTTGAAGGT+TGG | + | contig94end:404-423 | MsG0080049147.01.T01:intron | 50.0% | |
| CAGGATAACTGGGTATGTGG+AGG | + | contig94end:1706-1725 | MsG0080049147.01.T01:intron | 50.0% | |
| CTTATGTTTGGATGGAGGGG+AGG | + | contig94end:1471-1490 | MsG0080049147.01.T01:intron | 50.0% | |
| GAAGGAGTTTATTCCGTGGG+AGG | + | contig94end:1423-1442 | MsG0080049147.01.T01:intron | 50.0% | |
| GAGCAGGATAACTGGGTATG+TGG | + | contig94end:1703-1722 | MsG0080049147.01.T01:intron | 50.0% | |
| GGGTTGTGGGAATTTGGATG+AGG | + | contig94end:326-345 | MsG0080049147.01.T01:CDS | 50.0% | |
| TGGAGGTTGTGTGAATGAGC+AGG | + | contig94end:1687-1706 | MsG0080049147.01.T01:intron | 50.0% | |
| TGTGAAGGGTGAGAGGTTGA+AGG | + | contig94end:400-419 | MsG0080049147.01.T01:intron | 50.0% | |
| ! | TGAAACAGTTGGTTCAGGGG+TGG | + | contig94end:1378-1397 | MsG0080049147.01.T01:CDS | 50.0% |
| !! | AGGCTGCATTGGTTGAAGCA+GGG | + | contig94end:518-537 | MsG0080049147.01.T01:CDS | 50.0% |
| !! | TTTTGGGAGGAACCTTCGAG+CGG | + | contig94end:1280-1299 | MsG0080049147.01.T01:CDS | 50.0% |
| !!! | GGGTTGAGTTTTGAGGGTTG+TGG | + | contig94end:312-331 | MsG0080049147.01.T01:CDS | 50.0% |
| CTCGTTGTTGCACTCCCACT+AGG | - | contig94end:1774-1793 | None:intergenic | 55.0% | |
| GTTGAAGCAGGGGAGCTTGT+GGG | + | contig94end:529-548 | MsG0080049147.01.T01:CDS | 55.0% | |
| TCGGAGACAGCGCTTGTGAA+GGG | + | contig94end:386-405 | MsG0080049147.01.T01:intron | 55.0% | |
| TTCGGAGACAGCGCTTGTGA+AGG | + | contig94end:385-404 | MsG0080049147.01.T01:intron | 55.0% | |
| ! | AGTGGGAGTGCAACAACGAG+AGG | + | contig94end:1774-1793 | MsG0080049147.01.T01:CDS | 55.0% |
| !! | GAGGCTGCATTGGTTGAAGC+AGG | + | contig94end:517-536 | MsG0080049147.01.T01:CDS | 55.0% |
| !! | GGCTGCATTGGTTGAAGCAG+GGG | + | contig94end:519-538 | MsG0080049147.01.T01:CDS | 55.0% |
| CAGCGCTTGTGAAGGGTGAG+AGG | + | contig94end:393-412 | MsG0080049147.01.T01:intron | 60.0% | |
| GGTTGAAGCAGGGGAGCTTG+TGG | + | contig94end:528-547 | MsG0080049147.01.T01:CDS | 60.0% | |
| !! | TATGGTTGGTGCTGGGGCTC+TGG | + | contig94end:158-177 | MsG0080049147.01.T01:CDS | 60.0% |
| AACCTTCGAGCGGAGGGGTG+GGG | + | contig94end:1290-1309 | MsG0080049147.01.T01:CDS | 65.0% | |
| GAACCTTCGAGCGGAGGGGT+GGG | + | contig94end:1289-1308 | MsG0080049147.01.T01:CDS | 65.0% | |
| GGAGGAACCTTCGAGCGGAG+GGG | + | contig94end:1285-1304 | MsG0080049147.01.T01:CDS | 65.0% | |
| GGGAGGAACCTTCGAGCGGA+GGG | + | contig94end:1284-1303 | MsG0080049147.01.T01:CDS | 65.0% | |
| TGGGAGGAACCTTCGAGCGG+AGG | + | contig94end:1283-1302 | MsG0080049147.01.T01:CDS | 65.0% | |
| !! | GGGTGGGGGAGGGGTATTCA+AGG | + | contig94end:1311-1330 | MsG0080049147.01.T01:CDS | 65.0% |
| ACCTTCGAGCGGAGGGGTGG+GGG | + | contig94end:1291-1310 | MsG0080049147.01.T01:CDS | 70.0% | |
| GGAACCTTCGAGCGGAGGGG+TGG | + | contig94end:1288-1307 | MsG0080049147.01.T01:CDS | 70.0% | |
| ACCCCCACCCCTCCGCTCGA+AGG | - | contig94end:1295-1314 | None:intergenic | 75.0% | |
| TCGAGCGGAGGGGTGGGGGT+GGG | + | contig94end:1295-1314 | MsG0080049147.01.T01:CDS | 75.0% | |
| TTCGAGCGGAGGGGTGGGGG+TGG | + | contig94end:1294-1313 | MsG0080049147.01.T01:CDS | 75.0% | |
| ! | CGAGCGGAGGGGTGGGGGTG+GGG | + | contig94end:1296-1315 | MsG0080049147.01.T01:CDS | 80.0% |
| ! | GAGCGGAGGGGTGGGGGTGG+GGG | + | contig94end:1297-1316 | MsG0080049147.01.T01:CDS | 80.0% |
| ! | GAGGGGTGGGGGTGGGGGAG+GGG | + | contig94end:1302-1321 | MsG0080049147.01.T01:CDS | 80.0% |
| ! | GGAGGGGTGGGGGTGGGGGA+GGG | + | contig94end:1301-1320 | MsG0080049147.01.T01:CDS | 80.0% |
| ! | CGGAGGGGTGGGGGTGGGGG+AGG | + | contig94end:1300-1319 | MsG0080049147.01.T01:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig94end | gene | 1 | 1831 | 1 | ID=MsG0080049147.01; |
| contig94end | mRNA | 1 | 1831 | 1 | ID=MsG0080049147.01.T01;Parent=MsG0080049147.01 |
| contig94end | CDS | 1 | 347 | 1 | ID=MsG0080049147.01.T01.cds;Parent=MsG0080049147.01.T01 |
| contig94end | CDS | 457 | 565 | 457 | ID=MsG0080049147.01.T01.cds;Parent=MsG0080049147.01.T01 |
| contig94end | CDS | 1251 | 1417 | 1251 | ID=MsG0080049147.01.T01.cds;Parent=MsG0080049147.01.T01 |
| contig94end | CDS | 1709 | 1831 | 1709 | ID=MsG0080049147.01.T01.cds;Parent=MsG0080049147.01.T01 |
| Gene Sequence |
| Protein sequence |
