AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031148.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031148.01.T01 MTR_6g016895 89.249 493 25 1 18 510 1 465 0.0 887
MsG0680031148.01.T01 MTR_6g016895 89.249 493 22 1 18 510 1 462 0.0 886
MsG0680031148.01.T01 MTR_4g124020 51.136 88 31 2 184 271 5 80 2.61e-16 74.3
MsG0680031148.01.T01 MTR_1g087290 37.895 95 56 3 15 107 105 198 1.12e-14 77.8
MsG0680031148.01.T01 MTR_1g087290 37.895 95 56 3 15 107 105 198 1.14e-14 77.8
MsG0680031148.01.T01 MTR_8g006610 50.649 77 26 2 196 272 52 116 4.68e-12 63.2
MsG0680031148.01.T01 MTR_8g005560 50.649 77 26 2 196 272 81 145 1.26e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031148.01.T01 AT1G67180 38.976 508 240 13 18 510 1 453 2.16e-101 312
MsG0680031148.01.T01 AT1G67180 38.976 508 240 13 18 510 1 453 2.16e-101 312
MsG0680031148.01.T01 AT1G67180 39.372 414 207 10 18 416 1 385 1.24e-82 262
MsG0680031148.01.T01 AT1G67180 32.394 426 218 14 100 510 1 371 1.23e-51 180
MsG0680031148.01.T01 AT1G67180 32.394 426 218 14 100 510 1 371 1.23e-51 180
MsG0680031148.01.T01 AT1G67180 31.231 333 183 11 100 416 1 303 3.67e-33 129
MsG0680031148.01.T01 AT1G67180 31.231 333 183 11 100 416 1 303 3.67e-33 129
MsG0680031148.01.T01 AT4G02110 34.737 95 59 3 15 107 106 199 1.32e-13 74.3

Find 114 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGATGGCCCCTATAATTT+TGG 0.128108 6:-15125895 MsG0680031148.01.T01:CDS
GCCTCTGACCACTTTATTCT+TGG 0.198912 6:+15126567 None:intergenic
GTGCTTAAATCCAAAATTAT+AGG 0.247700 6:+15125885 None:intergenic
TGCAGGATATAAGAATCTTC+TGG 0.268874 6:+15127246 None:intergenic
GCTGGAAGTTTATGCATTAC+TGG 0.273030 6:-15124189 MsG0680031148.01.T01:intron
TGCTTAAATCCAAAATTATA+GGG 0.275232 6:+15125886 None:intergenic
TCTGGAAATTCTTGATCAAT+TGG 0.294794 6:+15124539 None:intergenic
ACAATAAATATAGTTTAATA+TGG 0.297592 6:+15124493 None:intergenic
ATTAAGCTCATTTCGCGTTC+CGG 0.313964 6:-15128127 MsG0680031148.01.T01:CDS
TGAAGTAGGGCCATTATTAA+TGG 0.327138 6:-15126623 MsG0680031148.01.T01:CDS
ACTGGAACTTCCATTAATAA+TGG 0.331482 6:+15126613 None:intergenic
TTTCATGATCTTCATAATAC+TGG 0.336831 6:+15124643 None:intergenic
GATGATGACGATATGGTAAT+TGG 0.343253 6:-15130100 MsG0680031148.01.T01:intron
AGATTCTTCTTTACTGAAAC+AGG 0.344144 6:-15126470 MsG0680031148.01.T01:intron
GAAAACAAAATCACCTTTGC+AGG 0.344615 6:+15127229 None:intergenic
CGACATATCTCCAACGTAAC+TGG 0.349272 6:+15128102 None:intergenic
TATGACATTGCCCGTAAGTT+AGG 0.352714 6:-15127327 MsG0680031148.01.T01:CDS
CAAAATACTGACTTCAGTTC+CGG 0.356103 6:-15126517 MsG0680031148.01.T01:CDS
CAATTCTCAAGTAGATCTTC+AGG 0.358088 6:+15124086 None:intergenic
GGTCTGTGGAATTTCTGTTT+TGG 0.374321 6:-15126494 MsG0680031148.01.T01:CDS
AACATATATTCCTAACTTAC+GGG 0.374862 6:+15127317 None:intergenic
CAACATATATTCCTAACTTA+CGG 0.380975 6:+15127316 None:intergenic
ATCAATTGATGATGACGATA+TGG 0.385425 6:-15130107 MsG0680031148.01.T01:CDS
CAATATTGACATGGCGAGAA+TGG 0.387044 6:+15125805 None:intergenic
ATTTCCAGACAATATCTTAG+AGG 0.387260 6:-15124525 MsG0680031148.01.T01:CDS
CAATATTTATAGAAAGCAAT+GGG 0.396864 6:-15124695 MsG0680031148.01.T01:intron
GATTGAATCGCTCGAGTTCA+CGG 0.397257 6:+15128152 None:intergenic
CTGGAAATTCTTGATCAATT+GGG 0.400835 6:+15124540 None:intergenic
CAGGTTTGTTGGAAGTTTGA+AGG 0.408859 6:-15127357 MsG0680031148.01.T01:CDS
TGTAATCACATGGAATTGTC+TGG 0.410081 6:+15124582 None:intergenic
AAGCATTCGAAGTTCCTTGC+AGG 0.413985 6:+15123992 None:intergenic
GCCTATCTATTTCGCAAAGC+TGG 0.414993 6:+15125856 None:intergenic
CATACCTCTAAGATATTGTC+TGG 0.416714 6:+15124521 None:intergenic
GTCGAAGTCAATTACTCATC+TGG 0.430392 6:-15128083 MsG0680031148.01.T01:intron
GACCACTTTATTCTTGGATA+AGG 0.439955 6:+15126573 None:intergenic
TTCCCTTTCCTTGACAGTCT+AGG 0.446533 6:+15125999 None:intergenic
GTTTGAATGTTCAGGTTTGT+TGG 0.453909 6:-15127368 MsG0680031148.01.T01:intron
GTACTTGCTTGAACATTGAC+TGG 0.455699 6:+15126595 None:intergenic
AAAATACTGACTTCAGTTCC+GGG 0.458436 6:-15126516 MsG0680031148.01.T01:CDS
ACCAGCTTTGCGAAATAGAT+AGG 0.461923 6:-15125857 MsG0680031148.01.T01:CDS
GCAGGATATAAGAATCTTCT+GGG 0.467009 6:+15127247 None:intergenic
TTGGGTTGAAGACTGTATAA+AGG 0.468632 6:-15127283 MsG0680031148.01.T01:CDS
GACATTCTCGTAAAGGAAGA+AGG 0.471809 6:-15125941 MsG0680031148.01.T01:CDS
AAGAATTCATTCTTATTGCA+TGG 0.472776 6:-15124045 MsG0680031148.01.T01:CDS
CACCTAGACTGTCAAGGAAA+GGG 0.484019 6:-15126001 MsG0680031148.01.T01:CDS
TTGTGTAATTTGCGGTGGTC+GGG 0.484418 6:-15124111 MsG0680031148.01.T01:CDS
CTTGTGTAATTTGCGGTGGT+CGG 0.486425 6:-15124112 MsG0680031148.01.T01:CDS
ATTCGATTGAGCAGGTTGTA+AGG 0.488505 6:-15128215 MsG0680031148.01.T01:intron
GTGCATGTCCATGGTCGTAA+TGG 0.488516 6:+15124017 None:intergenic
AATATTGACATGGCGAGAAT+GGG 0.494689 6:+15125806 None:intergenic
CTGATGTTTGTGTCAGAGGA+AGG 0.500424 6:+15125634 None:intergenic
ATCTCCAACGTAACTGGCAC+CGG 0.507756 6:+15128108 None:intergenic
CATGACAACTCATTTGAAGT+AGG 0.507841 6:+15125543 None:intergenic
GATGTTTGTGTCAGAGGAAG+GGG 0.513973 6:+15125636 None:intergenic
ATATGTTGTCAACCACCGTT+GGG 0.514013 6:-15127301 MsG0680031148.01.T01:CDS
ATGACAACTCATTTGAAGTA+GGG 0.514847 6:+15125544 None:intergenic
TGAGCAGGTTGTAAGGTTGA+AGG 0.515117 6:-15128208 MsG0680031148.01.T01:intron
GACTTCAGTTCCGGGGTCTG+TGG 0.517468 6:-15126508 MsG0680031148.01.T01:CDS
TCAATATTTATAGAAAGCAA+TGG 0.518517 6:-15124696 MsG0680031148.01.T01:intron
TCTACTGATGTTTGTGTCAG+AGG 0.523823 6:+15125630 None:intergenic
TTCAAACTGTCCTTTGTGCA+AGG 0.528208 6:-15124666 MsG0680031148.01.T01:CDS
TCAGGTGCTTGTGTAATTTG+CGG 0.532416 6:-15124119 MsG0680031148.01.T01:CDS
TACCTTATCCAAGAATAAAG+TGG 0.536796 6:-15126575 MsG0680031148.01.T01:CDS
AGTTGTCATGTGTCATATGT+TGG 0.545984 6:-15125530 MsG0680031148.01.T01:CDS
CATGTCCATGGTCGTAATGG+AGG 0.547089 6:+15124020 None:intergenic
TATATGTTGTCAACCACCGT+TGG 0.548814 6:-15127302 MsG0680031148.01.T01:CDS
AGGTTGTAAGGTTGAAGGTA+TGG 0.548834 6:-15128203 MsG0680031148.01.T01:CDS
CCTTTCCTTGACAGTCTAGG+TGG 0.548975 6:+15126002 None:intergenic
TTGCAGGAAGTGCATGTCCA+TGG 0.560200 6:+15124008 None:intergenic
GTTGAAGACTGTATAAAGGA+AGG 0.565722 6:-15127279 MsG0680031148.01.T01:CDS
TGATGTTTGTGTCAGAGGAA+GGG 0.566455 6:+15125635 None:intergenic
CGTTCCGGTGCCAGTTACGT+TGG 0.568718 6:-15128112 MsG0680031148.01.T01:CDS
AACAGAAATTCCACAGACCC+CGG 0.570394 6:+15126498 None:intergenic
GCCATCTGAACTTCCATCGA+TGG 0.570841 6:+15125725 None:intergenic
ACCATCGATGGAAGTTCAGA+TGG 0.575750 6:-15125726 MsG0680031148.01.T01:CDS
CTCTGCGATCAACCCAACCC+TGG 0.576285 6:+15125445 None:intergenic
TGGACCCTCCATTACGACCA+TGG 0.578315 6:-15124025 MsG0680031148.01.T01:CDS
CCACCTAGACTGTCAAGGAA+AGG 0.580373 6:-15126002 MsG0680031148.01.T01:CDS
GTAATCACATGGAATTGTCT+GGG 0.585390 6:+15124583 None:intergenic
ACGGCTAGACATTCTCGTAA+AGG 0.588477 6:-15125948 MsG0680031148.01.T01:CDS
AAAATGCTTACTAATATAAG+CGG 0.599986 6:+15123961 None:intergenic
ATTATCAACCGCATCACCAT+CGG 0.600382 6:+15125578 None:intergenic
GGTTGAAGGTATGGATCGAG+TGG 0.604408 6:-15128194 MsG0680031148.01.T01:CDS
GACAGATTTCAGTTCAACAA+GGG 0.604559 6:-15125508 MsG0680031148.01.T01:CDS
GGACAGATTTCAGTTCAACA+AGG 0.605166 6:-15125509 MsG0680031148.01.T01:CDS
ACATTCTCGTAAAGGAAGAA+GGG 0.606318 6:-15125940 MsG0680031148.01.T01:CDS
AAGATTCTTATATCCTGCAA+AGG 0.607161 6:-15127242 MsG0680031148.01.T01:intron
GCTTAAATCCAAAATTATAG+GGG 0.610355 6:+15125887 None:intergenic
ATGTCCATGGTCGTAATGGA+GGG 0.610475 6:+15124021 None:intergenic
GAATATTGTCAATATTGACA+TGG 0.613834 6:+15125796 None:intergenic
AGTCAAAGTAGAACCATCGA+TGG 0.615513 6:-15125738 MsG0680031148.01.T01:CDS
CGAGTGGTTGCAACAGTAAG+CGG 0.618718 6:-15128178 MsG0680031148.01.T01:CDS
ATGGACATGCACTTCCTGCA+AGG 0.619436 6:-15124006 MsG0680031148.01.T01:CDS
AATATTCAAGAAAATAGTGA+AGG 0.623793 6:-15125780 MsG0680031148.01.T01:CDS
GCAAATTACACAAGCACCTG+AGG 0.629592 6:+15124121 None:intergenic
TGACAACTCATTTGAAGTAG+GGG 0.631458 6:+15125545 None:intergenic
TCCAAGAATAAAGTGGTCAG+AGG 0.632253 6:-15126568 MsG0680031148.01.T01:CDS
CGTATCCACCTAGACTGTCA+AGG 0.634403 6:-15126007 MsG0680031148.01.T01:CDS
AAGACTGTATAAAGGAAGGA+AGG 0.641299 6:-15127275 MsG0680031148.01.T01:CDS
GCTGCTGAAAAGTTCTCCGA+TGG 0.649666 6:-15125594 MsG0680031148.01.T01:CDS
TCTGAGGTAGTGTAATCACA+TGG 0.651511 6:+15124572 None:intergenic
TTTACGAGAATGTCTAGCCG+TGG 0.651918 6:+15125950 None:intergenic
GGTGCTTGTGTAATTTGCGG+TGG 0.655328 6:-15124116 MsG0680031148.01.T01:CDS
CATGTGATATTGTGTCCGAA+AGG 0.657843 6:-15126540 MsG0680031148.01.T01:CDS
CAGATTTCAGTTCAACAAGG+GGG 0.664303 6:-15125506 MsG0680031148.01.T01:CDS
TACAGTCTTCAACCCAACGG+TGG 0.666109 6:+15127289 None:intergenic
TTATACAGTCTTCAACCCAA+CGG 0.666643 6:+15127286 None:intergenic
ACAGATTTCAGTTCAACAAG+GGG 0.667970 6:-15125507 MsG0680031148.01.T01:CDS
AGAAAATGATGTTAGTACCA+CGG 0.671903 6:-15125967 MsG0680031148.01.T01:CDS
ATAATACTGGCCTTGCACAA+AGG 0.674795 6:+15124656 None:intergenic
AAATGATGGTGAAGTGACGA+TGG 0.682327 6:-15125910 MsG0680031148.01.T01:CDS
AAATACTGACTTCAGTTCCG+GGG 0.690610 6:-15126515 MsG0680031148.01.T01:CDS
AAAGTTCTCCGATGGTGATG+CGG 0.690920 6:-15125586 MsG0680031148.01.T01:CDS
AATATTTATAGAAAGCAATG+GGG 0.692135 6:-15124694 MsG0680031148.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAATATAAATTAAA+AGG + Chr6:15125427-15125446 None:intergenic 0.0%
!! TTAAAAAAAAAAAAAAAATA+AGG + Chr6:15129624-15129643 None:intergenic 0.0%
!! ACAAAATATTCAATTATAAA+CGG + Chr6:15126695-15126714 None:intergenic 10.0%
!! ACAATAAATATAGTTTAATA+TGG + Chr6:15129593-15129612 None:intergenic 10.0%
!! ATAAACTTATAAACTTATTA+AGG + Chr6:15125336-15125355 None:intergenic 10.0%
!! TATTAAACTATATTTATTGT+CGG - Chr6:15129593-15129612 MsG0680031148.01.T01:intron 10.0%
!!! CTGAAAAAAATAAAAAATTT+TGG - Chr6:15124668-15124687 MsG0680031148.01.T01:CDS 10.0%
!!! TAACAAAATCTAATTTTATT+AGG - Chr6:15126107-15126126 MsG0680031148.01.T01:intron 10.0%
!!! TGGATTTTATAAAATTATTA+GGG - Chr6:15126924-15126943 MsG0680031148.01.T01:intron 10.0%
!!! TTCAACTTTATTTTTTTTTT+TGG - Chr6:15124045-15124064 MsG0680031148.01.T01:CDS 10.0%
!!! TTGGATTTTATAAAATTATT+AGG - Chr6:15126923-15126942 MsG0680031148.01.T01:intron 10.0%
!! AAAAAAAAATATAACGGTTA+AGG + Chr6:15127681-15127700 None:intergenic 15.0%
!! AAAATAAGTAGGTATTTATA+AGG + Chr6:15125070-15125089 None:intergenic 15.0%
!! AATAAAAAGATATTGGAAAA+AGG + Chr6:15128668-15128687 None:intergenic 15.0%
!! CTGAAAATATTAAAAAATTC+TGG - Chr6:15124458-15124477 MsG0680031148.01.T01:intron 15.0%
!! GAAATTTCAAAAAATACTAA+TGG - Chr6:15124889-15124908 MsG0680031148.01.T01:intron 15.0%
!! GATGTATAATAAAAAGATAT+TGG + Chr6:15128675-15128694 None:intergenic 15.0%
!! TATAAAATATTGTGAAATAG+CGG + Chr6:15126310-15126329 None:intergenic 15.0%
!! TCAATTCAACTAATAAAATA+AGG + Chr6:15128896-15128915 None:intergenic 15.0%
!! TTATGTATATTTATGTTATG+TGG - Chr6:15127222-15127241 MsG0680031148.01.T01:intron 15.0%
!!! ACTATCATTATTATTTTTAG+TGG - Chr6:15127434-15127453 MsG0680031148.01.T01:intron 15.0%
!!! TAAATGGATTTTTATTTCAA+CGG - Chr6:15126588-15126607 MsG0680031148.01.T01:CDS 15.0%
!!! TTTTGTGAATGATAAATATT+TGG - Chr6:15129698-15129717 MsG0680031148.01.T01:intron 15.0%
!! AAAATGAACATTGCATATAA+CGG + Chr6:15127714-15127733 None:intergenic 20.0%
!! AAACATAGGGTTATATTTAT+TGG + Chr6:15125558-15125577 None:intergenic 20.0%
!! AACAGAAAACAAAATACTAT+TGG + Chr6:15128829-15128848 None:intergenic 20.0%
!! AACATAGGGTTATATTTATT+GGG + Chr6:15125557-15125576 None:intergenic 20.0%
!! AATAGGTTATGGTTTATATA+TGG - Chr6:15129266-15129285 MsG0680031148.01.T01:intron 20.0%
!! AATATTCAAGAAAATAGTGA+AGG - Chr6:15128303-15128322 MsG0680031148.01.T01:intron 20.0%
!! AATATTTATAGAAAGCAATG+GGG - Chr6:15129389-15129408 MsG0680031148.01.T01:intron 20.0%
!! AGTTTAATTGTTGTAAACAT+AGG + Chr6:15125572-15125591 None:intergenic 20.0%
!! CAATATTTATAGAAAGCAAT+GGG - Chr6:15129388-15129407 MsG0680031148.01.T01:intron 20.0%
!! GACTATACTAATCAATTAAT+AGG + Chr6:15128702-15128721 None:intergenic 20.0%
!! GCATTGTTGAATAAAATATT+AGG + Chr6:15129822-15129841 None:intergenic 20.0%
!! GTTTAATTGTTGTAAACATA+GGG + Chr6:15125571-15125590 None:intergenic 20.0%
!! TAATTTAATAATTACCCATG+TGG + Chr6:15124332-15124351 None:intergenic 20.0%
!! TCAATATTTATAGAAAGCAA+TGG - Chr6:15129387-15129406 MsG0680031148.01.T01:intron 20.0%
!! TCATGTATTTATCTAATTAC+AGG - Chr6:15126613-15126632 MsG0680031148.01.T01:CDS 20.0%
!! TGCTTAAATCCAAAATTATA+GGG + Chr6:15128200-15128219 None:intergenic 20.0%
!! TTAAGACTAAATTGAGAATT+CGG + Chr6:15124150-15124169 None:intergenic 20.0%
!!! AAACTGAAATTTACTTTTAC+AGG - Chr6:15127081-15127100 MsG0680031148.01.T01:intron 20.0%
!!! AAATTGTAGTTTTCAAACTT+TGG + Chr6:15124232-15124251 None:intergenic 20.0%
!!! AAGTTTGAAAACTACAATTT+TGG - Chr6:15124232-15124251 MsG0680031148.01.T01:intron 20.0%
!!! AATCTTTATTGTACACATTT+TGG - Chr6:15129872-15129891 MsG0680031148.01.T01:intron 20.0%
!!! AATTGTAGTTTTCAAACTTT+GGG + Chr6:15124231-15124250 None:intergenic 20.0%
!!! CTCAATTTAGTCTTAATTTT+AGG - Chr6:15124154-15124173 MsG0680031148.01.T01:CDS 20.0%
!!! TAAATAACAAGTTGAGAAAA+TGG + Chr6:15127861-15127880 None:intergenic 20.0%
!!! TGTCTCTAAAAAAATTTCTT+TGG + Chr6:15129759-15129778 None:intergenic 20.0%
!!! TTAACAATACTGATTATGTA+AGG - Chr6:15126406-15126425 MsG0680031148.01.T01:intron 20.0%
!!! TTACAAAACAACTTCTAAAA+AGG + Chr6:15128945-15128964 None:intergenic 20.0%
!!! TTATAAAATCCAATGCATTT+TGG + Chr6:15126916-15126935 None:intergenic 20.0%
!!! TTGCAATAACATAAATTTTG+AGG - Chr6:15124101-15124120 MsG0680031148.01.T01:CDS 20.0%
!!! TTTTAATTTTCCCTTACAAT+AGG - Chr6:15129249-15129268 MsG0680031148.01.T01:intron 20.0%
!!! TTTTCATTAGTATTTTTTCC+TGG - Chr6:15124805-15124824 MsG0680031148.01.T01:intron 20.0%
!!! TTTTGACTAAATTTGAAAGT+TGG - Chr6:15128744-15128763 MsG0680031148.01.T01:intron 20.0%
! AAAAAATATAACGGTTAAGG+AGG + Chr6:15127678-15127697 None:intergenic 25.0%
! AAAACAAAAAAGTTGAAGAG+AGG - Chr6:15126205-15126224 MsG0680031148.01.T01:intron 25.0%
! AAACAAAAAAGTTGAAGAGA+GGG - Chr6:15126206-15126225 MsG0680031148.01.T01:intron 25.0%
! AAATTTAAGCTACTAGATTC+AGG + Chr6:15127125-15127144 None:intergenic 25.0%
! AACATATATTCCTAACTTAC+GGG + Chr6:15126769-15126788 None:intergenic 25.0%
! AAGAATTCATTCTTATTGCA+TGG - Chr6:15130038-15130057 MsG0680031148.01.T01:intron 25.0%
! AGAAAATGGTTAAGCATTAA+CGG + Chr6:15127847-15127866 None:intergenic 25.0%
! AGAATTATACCAAAATGCAT+TGG - Chr6:15126904-15126923 MsG0680031148.01.T01:intron 25.0%
! ATAAACAAAAAACCTAAGCT+CGG + Chr6:15124768-15124787 None:intergenic 25.0%
! ATAAACCATAACCTATTGTA+AGG + Chr6:15129263-15129282 None:intergenic 25.0%
! ATTCTTTCATTCTAACATGA+AGG - Chr6:15129726-15129745 MsG0680031148.01.T01:intron 25.0%
! ATTTAACTATTCGATTGTTG+TGG - Chr6:15126053-15126072 MsG0680031148.01.T01:intron 25.0%
! CAACATATATTCCTAACTTA+CGG + Chr6:15126770-15126789 None:intergenic 25.0%
! CAGTTATACAAATACAAATG+TGG - Chr6:15128917-15128936 MsG0680031148.01.T01:intron 25.0%
! GAATATTGTCAATATTGACA+TGG + Chr6:15128290-15128309 None:intergenic 25.0%
! GATGAATGAGTAAAAAACTT+AGG - Chr6:15126161-15126180 MsG0680031148.01.T01:intron 25.0%
! GCTTAAATCCAAAATTATAG+GGG + Chr6:15128199-15128218 None:intergenic 25.0%
! GGTATAATTCTACCATAATT+GGG + Chr6:15126895-15126914 None:intergenic 25.0%
! GTAGAGACAAATAAGATTAA+CGG + Chr6:15128025-15128044 None:intergenic 25.0%
! GTATAAATACACAAAATTCC+AGG + Chr6:15124826-15124845 None:intergenic 25.0%
! GTATATTTATGTTATGTGGT+GGG - Chr6:15127226-15127245 MsG0680031148.01.T01:intron 25.0%
! GTGCTTAAATCCAAAATTAT+AGG + Chr6:15128201-15128220 None:intergenic 25.0%
! TAAACCATAACCTATTGTAA+GGG + Chr6:15129262-15129281 None:intergenic 25.0%
! TGGTATAATTCTACCATAAT+TGG + Chr6:15126896-15126915 None:intergenic 25.0%
! TGTATATTTATGTTATGTGG+TGG - Chr6:15127225-15127244 MsG0680031148.01.T01:intron 25.0%
! TTTCATGATCTTCATAATAC+TGG + Chr6:15129443-15129462 None:intergenic 25.0%
!! AAATCCTTTTAGCATTAGAT+TGG + Chr6:15129203-15129222 None:intergenic 25.0%
!! AAGTCATTTAAGTTTCATGA+TGG + Chr6:15129086-15129105 None:intergenic 25.0%
!! ACAATAACTCTTTTCATACA+GGG + Chr6:15125102-15125121 None:intergenic 25.0%
!! ATTGTAGTTTTCAAACTTTG+GGG + Chr6:15124230-15124249 None:intergenic 25.0%
!! CTATTTTGTTAGAGATGAAT+TGG - Chr6:15126139-15126158 MsG0680031148.01.T01:intron 25.0%
!! GATATACATTTGATGACATT+TGG - Chr6:15126645-15126664 MsG0680031148.01.T01:intron 25.0%
!! GTTCTTCAAATTTTACTAGA+CGG + Chr6:15127391-15127410 None:intergenic 25.0%
!! GTTGCTTAATTTTCTGAATA+GGG - Chr6:15127774-15127793 MsG0680031148.01.T01:intron 25.0%
!! TATTTTGTGTTTGAATGTTC+AGG - Chr6:15126707-15126726 MsG0680031148.01.T01:intron 25.0%
!! TTGTTTTCTGTTTTCTCATT+GGG - Chr6:15128837-15128856 MsG0680031148.01.T01:intron 25.0%
!! TTTCAAAAAAGTTGCGATTT+TGG - Chr6:15124203-15124222 MsG0680031148.01.T01:intron 25.0%
!! TTTTCCAATCTAATGCTAAA+AGG - Chr6:15129196-15129215 MsG0680031148.01.T01:intron 25.0%
!! TTTTTAATCCCATAAGTAGA+CGG - Chr6:15127924-15127943 MsG0680031148.01.T01:intron 25.0%
!!! AATAAGACGCTTATTTTGTT+TGG - Chr6:15127324-15127343 MsG0680031148.01.T01:CDS 25.0%
!!! ACTAGAATTTGCTCATTTTA+CGG - Chr6:15129779-15129798 MsG0680031148.01.T01:intron 25.0%
!!! TGTTGCTTAATTTTCTGAAT+AGG - Chr6:15127773-15127792 MsG0680031148.01.T01:intron 25.0%
!!! TTGTTTTGTAGTTTAAGGTT+TGG - Chr6:15127281-15127300 MsG0680031148.01.T01:CDS 25.0%
!!! TTTGTTTTCTGTTTTCTCAT+TGG - Chr6:15128836-15128855 MsG0680031148.01.T01:intron 25.0%
AAAAGGACCAAATATGCAAA+GGG + Chr6:15124274-15124293 None:intergenic 30.0%
AAGATTCTTATATCCTGCAA+AGG - Chr6:15126841-15126860 MsG0680031148.01.T01:intron 30.0%
AATAACAACAAAAACCAGTG+AGG + Chr6:15127200-15127219 None:intergenic 30.0%
AATTGGGATACAAAAATCTG+AGG + Chr6:15129530-15129549 None:intergenic 30.0%
ACTGGAACTTCCATTAATAA+TGG + Chr6:15127473-15127492 None:intergenic 30.0%
AGAAAATGATGTTAGTACCA+CGG - Chr6:15128116-15128135 MsG0680031148.01.T01:CDS 30.0%
AGATTCTTCTTTACTGAAAC+AGG - Chr6:15127613-15127632 MsG0680031148.01.T01:intron 30.0%
ATCCACACAAAGGTAATAAA+TGG - Chr6:15126572-15126591 MsG0680031148.01.T01:CDS 30.0%
ATCCATTTATTACCTTTGTG+TGG + Chr6:15126577-15126596 None:intergenic 30.0%
ATTTATGCATGTGTGTCTTT+AGG - Chr6:15127876-15127895 MsG0680031148.01.T01:intron 30.0%
ATTTCCAGACAATATCTTAG+AGG - Chr6:15129558-15129577 MsG0680031148.01.T01:intron 30.0%
CTGGAAATTCTTGATCAATT+GGG + Chr6:15129546-15129565 None:intergenic 30.0%
CTTTGATTCCTGAATTTGTA+AGG + Chr6:15125231-15125250 None:intergenic 30.0%
GGACTGAAATGAAAATAAGT+AGG + Chr6:15125081-15125100 None:intergenic 30.0%
GTCACATCAGAAATCTAAAA+AGG + Chr6:15128998-15129017 None:intergenic 30.0%
GTGTGAATTTAAATGACTGT+TGG - Chr6:15127000-15127019 MsG0680031148.01.T01:intron 30.0%
TAAATTGAGAATTCGGTACA+GGG + Chr6:15124143-15124162 None:intergenic 30.0%
TACCTTATCCAAGAATAAAG+TGG - Chr6:15127508-15127527 MsG0680031148.01.T01:intron 30.0%
TCGAAACGAGAATTAGAATT+AGG + Chr6:15125782-15125801 None:intergenic 30.0%
TCTGGAAATTCTTGATCAAT+TGG + Chr6:15129547-15129566 None:intergenic 30.0%
TGTATTTATAAACCGAGCTT+AGG - Chr6:15124753-15124772 MsG0680031148.01.T01:intron 30.0%
TGTTATCCTTTCATTCTTAC+CGG - Chr6:15128777-15128796 MsG0680031148.01.T01:intron 30.0%
TTAGTATATATGTCGAGCTT+AGG + Chr6:15124859-15124878 None:intergenic 30.0%
TTCTTCACTGAACAATACAA+AGG - Chr6:15125651-15125670 MsG0680031148.01.T01:CDS 30.0%
! ACAGCTGAATTATGTTTTTC+CGG + Chr6:15128799-15128818 None:intergenic 30.0%
! ATGACAACTCATTTGAAGTA+GGG + Chr6:15128542-15128561 None:intergenic 30.0%
! CACAATAACTCTTTTCATAC+AGG + Chr6:15125103-15125122 None:intergenic 30.0%
! TTCACAAAATTAAAAAGCGC+AGG + Chr6:15129687-15129706 None:intergenic 30.0%
! TTCGAAATTTTGAACTTTCC+CGG - Chr6:15125621-15125640 MsG0680031148.01.T01:CDS 30.0%
! TTTTAATCCCATAAGTAGAC+GGG - Chr6:15127925-15127944 MsG0680031148.01.T01:intron 30.0%
! TTTTCCCTTACAATAGGTTA+TGG - Chr6:15129255-15129274 MsG0680031148.01.T01:intron 30.0%
!! AAGCGTCTTATTTGTTAACA+AGG + Chr6:15127316-15127335 None:intergenic 30.0%
!! AGAGTTATTGTGAGTATTGA+TGG - Chr6:15125111-15125130 MsG0680031148.01.T01:intron 30.0%
!! AGTATAGTCTTGTATTATGC+TGG - Chr6:15128713-15128732 MsG0680031148.01.T01:intron 30.0%
!! ATCAATTGATGATGACGATA+TGG - Chr6:15123976-15123995 MsG0680031148.01.T01:CDS 30.0%
!! CTAGAATTTGCTCATTTTAC+GGG - Chr6:15129780-15129799 MsG0680031148.01.T01:intron 30.0%
!! GAAGGTTGTTTTGTAGTTTA+AGG - Chr6:15127276-15127295 MsG0680031148.01.T01:CDS 30.0%
!! TTTATTGTACACATTTTGGC+TGG - Chr6:15129876-15129895 MsG0680031148.01.T01:intron 30.0%
!! TTTTTAGTGGACATGAAGTA+GGG - Chr6:15127447-15127466 MsG0680031148.01.T01:intron 30.0%
!!! ATTTTTAGTGGACATGAAGT+AGG - Chr6:15127446-15127465 MsG0680031148.01.T01:intron 30.0%
!!! CAACTTTTTTGAAAGATAGG+GGG + Chr6:15124197-15124216 None:intergenic 30.0%
!!! CGCAACTTTTTTGAAAGATA+GGG + Chr6:15124199-15124218 None:intergenic 30.0%
!!! GCAACTTTTTTGAAAGATAG+GGG + Chr6:15124198-15124217 None:intergenic 30.0%
!!! GCTGTCTTTTTTCTATCAAA+AGG + Chr6:15126950-15126969 None:intergenic 30.0%
!!! TACTTTCCTTTTTTCAAGCA+CGG - Chr6:15128042-15128061 MsG0680031148.01.T01:intron 30.0%
!!! TCGCAACTTTTTTGAAAGAT+AGG + Chr6:15124200-15124219 None:intergenic 30.0%
!!! TTGTTTTTGAGTGTTGTTAG+TGG - Chr6:15127155-15127174 MsG0680031148.01.T01:intron 30.0%
!!! TTTTGTTTTTCATGCATCCA+GGG - Chr6:15128621-15128640 MsG0680031148.01.T01:intron 30.0%
AAAGGACCAAATATGCAAAG+GGG + Chr6:15124273-15124292 None:intergenic 35.0%
AAGACTGTATAAAGGAAGGA+AGG - Chr6:15126808-15126827 MsG0680031148.01.T01:intron 35.0%
AATATTGACATGGCGAGAAT+GGG + Chr6:15128280-15128299 None:intergenic 35.0%
ACAGATTTCAGTTCAACAAG+GGG - Chr6:15128576-15128595 MsG0680031148.01.T01:intron 35.0%
ACATTCTCGTAAAGGAAGAA+GGG - Chr6:15128143-15128162 MsG0680031148.01.T01:CDS 35.0%
ACTAACAAAGTGCACAATCA+AGG - Chr6:15125161-15125180 MsG0680031148.01.T01:intron 35.0%
AGAAGGGTTGTGAAAAATGA+TGG - Chr6:15128159-15128178 MsG0680031148.01.T01:CDS 35.0%
AGTTGTCATGTGTCATATGT+TGG - Chr6:15128553-15128572 MsG0680031148.01.T01:intron 35.0%
ATAGAAAAAAGACAGCACCA+TGG - Chr6:15126954-15126973 MsG0680031148.01.T01:intron 35.0%
ATCAGAATTCAGAACATGCT+TGG + Chr6:15127744-15127763 None:intergenic 35.0%
ATTCCTGAATTTGTAAGGAG+TGG + Chr6:15125226-15125245 None:intergenic 35.0%
CAAAAGGACCAAATATGCAA+AGG + Chr6:15124275-15124294 None:intergenic 35.0%
CAAATCCTTCAACTGTGTTA+GGG - Chr6:15125736-15125755 MsG0680031148.01.T01:CDS 35.0%
CAATTCTCAAGTAGATCTTC+AGG + Chr6:15130000-15130019 None:intergenic 35.0%
CTAAATTGAGAATTCGGTAC+AGG + Chr6:15124144-15124163 None:intergenic 35.0%
GAAAACAAAATCACCTTTGC+AGG + Chr6:15126857-15126876 None:intergenic 35.0%
GACAGATTTCAGTTCAACAA+GGG - Chr6:15128575-15128594 MsG0680031148.01.T01:intron 35.0%
GACCACTTTATTCTTGGATA+AGG + Chr6:15127513-15127532 None:intergenic 35.0%
GCAGGATATAAGAATCTTCT+GGG + Chr6:15126839-15126858 None:intergenic 35.0%
GTAATCACATGGAATTGTCT+GGG + Chr6:15129503-15129522 None:intergenic 35.0%
GTTGAAACTCGAAGATGTAT+TGG + Chr6:15129133-15129152 None:intergenic 35.0%
GTTGAAGACTGTATAAAGGA+AGG - Chr6:15126804-15126823 MsG0680031148.01.T01:intron 35.0%
TAATTCTACCATAATTGGGC+AGG + Chr6:15126891-15126910 None:intergenic 35.0%
TAGAAAAAAGACAGCACCAT+GGG - Chr6:15126955-15126974 MsG0680031148.01.T01:intron 35.0%
TCAAATCCTTCAACTGTGTT+AGG - Chr6:15125735-15125754 MsG0680031148.01.T01:CDS 35.0%
TCTTCAACGTCTAATAGTGA+AGG - Chr6:15124076-15124095 MsG0680031148.01.T01:CDS 35.0%
TGAAGTAGGGCCATTATTAA+TGG - Chr6:15127460-15127479 MsG0680031148.01.T01:intron 35.0%
TGCAGGATATAAGAATCTTC+TGG + Chr6:15126840-15126859 None:intergenic 35.0%
TGTAATCACATGGAATTGTC+TGG + Chr6:15129504-15129523 None:intergenic 35.0%
TGTCTAAAAGCTAGCTACAA+AGG + Chr6:15126504-15126523 None:intergenic 35.0%
TTAGTTACACATCCACACAA+AGG - Chr6:15126562-15126581 MsG0680031148.01.T01:CDS 35.0%
TTATACAGTCTTCAACCCAA+CGG + Chr6:15126800-15126819 None:intergenic 35.0%
TTTAGGCTAAAGTGCAACTT+TGG - Chr6:15124171-15124190 MsG0680031148.01.T01:CDS 35.0%
! CATGACAACTCATTTGAAGT+AGG + Chr6:15128543-15128562 None:intergenic 35.0%
! CTTTGCATATTTGGTCCTTT+TGG - Chr6:15124273-15124292 MsG0680031148.01.T01:intron 35.0%
! GAAGTCAGTATTTTGCCTTT+CGG + Chr6:15127561-15127580 None:intergenic 35.0%
! GATGATGACGATATGGTAAT+TGG - Chr6:15123983-15124002 MsG0680031148.01.T01:CDS 35.0%
! GTTTGAATGTTCAGGTTTGT+TGG - Chr6:15126715-15126734 MsG0680031148.01.T01:intron 35.0%
! GTTTTCTCATTGGGATTTTG+AGG - Chr6:15128846-15128865 MsG0680031148.01.T01:intron 35.0%
! GTTTTTCCGGTAAGAATGAA+AGG + Chr6:15128786-15128805 None:intergenic 35.0%
! TCAAATTTTACTAGACGGCA+GGG + Chr6:15127386-15127405 None:intergenic 35.0%
! TGACAACTCATTTGAAGTAG+GGG + Chr6:15128541-15128560 None:intergenic 35.0%
! TGTTTTCTTTGCATAGCTGA+TGG - Chr6:15129043-15129062 MsG0680031148.01.T01:intron 35.0%
! TTCAAATTTTACTAGACGGC+AGG + Chr6:15127387-15127406 None:intergenic 35.0%
! TTTTAGCCCCTTTGCATATT+TGG - Chr6:15124264-15124283 MsG0680031148.01.T01:intron 35.0%
!! AAAATACTGACTTCAGTTCC+GGG - Chr6:15127567-15127586 MsG0680031148.01.T01:intron 35.0%
!! CAAAATACTGACTTCAGTTC+CGG - Chr6:15127566-15127585 MsG0680031148.01.T01:intron 35.0%
!! CATACCTCTAAGATATTGTC+TGG + Chr6:15129565-15129584 None:intergenic 35.0%
!! TCCTTTTGGTCAATTTTGAC+CGG - Chr6:15124287-15124306 MsG0680031148.01.T01:intron 35.0%
!! TTGGGTTGAAGACTGTATAA+AGG - Chr6:15126800-15126819 MsG0680031148.01.T01:intron 35.0%
!!! ACTTTCCTTTTTTCAAGCAC+GGG - Chr6:15128043-15128062 MsG0680031148.01.T01:intron 35.0%
!!! CTTTTTTTCCTGCCCAATTA+TGG - Chr6:15126880-15126899 MsG0680031148.01.T01:intron 35.0%
!!! GTTTTGTTTTTCATGCATCC+AGG - Chr6:15128620-15128639 MsG0680031148.01.T01:intron 35.0%
!!! TGTAGCTAGCTTTTAGACAA+GGG - Chr6:15126505-15126524 MsG0680031148.01.T01:CDS 35.0%
!!! TTGTAGCTAGCTTTTAGACA+AGG - Chr6:15126504-15126523 MsG0680031148.01.T01:CDS 35.0%
ACCAGCTTTGCGAAATAGAT+AGG - Chr6:15128226-15128245 MsG0680031148.01.T01:intron 40.0%
ACCGGTCAAAATTGACCAAA+AGG + Chr6:15124291-15124310 None:intergenic 40.0%
ACTAGATTCAGGTCTACGAA+TGG + Chr6:15127114-15127133 None:intergenic 40.0%
AGGTTGTAAGGTTGAAGGTA+TGG - Chr6:15125880-15125899 MsG0680031148.01.T01:CDS 40.0%
AGTCAAAGTAGAACCATCGA+TGG - Chr6:15128345-15128364 MsG0680031148.01.T01:intron 40.0%
ATATGTTGTCAACCACCGTT+GGG - Chr6:15126782-15126801 MsG0680031148.01.T01:intron 40.0%
ATGCAAAGGGGCTAAAACAT+AGG + Chr6:15124261-15124280 None:intergenic 40.0%
ATTAAGCTCATTTCGCGTTC+CGG - Chr6:15125956-15125975 MsG0680031148.01.T01:CDS 40.0%
ATTATCAACCGCATCACCAT+CGG + Chr6:15128508-15128527 None:intergenic 40.0%
ATTCGATTGAGCAGGTTGTA+AGG - Chr6:15125868-15125887 MsG0680031148.01.T01:CDS 40.0%
CAATATTGACATGGCGAGAA+TGG + Chr6:15128281-15128300 None:intergenic 40.0%
CAGATTTCAGTTCAACAAGG+GGG - Chr6:15128577-15128596 MsG0680031148.01.T01:intron 40.0%
CATGTGATATTGTGTCCGAA+AGG - Chr6:15127543-15127562 MsG0680031148.01.T01:intron 40.0%
GACATTCTCGTAAAGGAAGA+AGG - Chr6:15128142-15128161 MsG0680031148.01.T01:CDS 40.0%
GCTGGAAGTTTATGCATTAC+TGG - Chr6:15129894-15129913 MsG0680031148.01.T01:intron 40.0%
GGACAGATTTCAGTTCAACA+AGG - Chr6:15128574-15128593 MsG0680031148.01.T01:intron 40.0%
GTACTTGCTTGAACATTGAC+TGG + Chr6:15127491-15127510 None:intergenic 40.0%
GTCGAAGTCAATTACTCATC+TGG - Chr6:15126000-15126019 MsG0680031148.01.T01:CDS 40.0%
TACTACTCGATGTGGAACAT+CGG + Chr6:15126432-15126451 None:intergenic 40.0%
TATATGTTGTCAACCACCGT+TGG - Chr6:15126781-15126800 MsG0680031148.01.T01:intron 40.0%
TATGACATTGCCCGTAAGTT+AGG - Chr6:15126756-15126775 MsG0680031148.01.T01:intron 40.0%
TCAGGTGCTTGTGTAATTTG+CGG - Chr6:15129964-15129983 MsG0680031148.01.T01:intron 40.0%
TCCAAGAATAAAGTGGTCAG+AGG - Chr6:15127515-15127534 MsG0680031148.01.T01:intron 40.0%
TCTACTGATGTTTGTGTCAG+AGG + Chr6:15128456-15128475 None:intergenic 40.0%
TGACCACTCCTTACAAATTC+AGG - Chr6:15125220-15125239 MsG0680031148.01.T01:intron 40.0%
TGATGTTTGTGTCAGAGGAA+GGG + Chr6:15128451-15128470 None:intergenic 40.0%
TGCAAAGGGGCTAAAACATA+GGG + Chr6:15124260-15124279 None:intergenic 40.0%
TGTAATGCCCGTCTACTTAT+GGG + Chr6:15127935-15127954 None:intergenic 40.0%
TTCAAACTGTCCTTTGTGCA+AGG - Chr6:15129417-15129436 MsG0680031148.01.T01:intron 40.0%
TTCAGTGAAGAAGCTATTGC+CGG + Chr6:15125643-15125662 None:intergenic 40.0%
! AAATGATGGTGAAGTGACGA+TGG - Chr6:15128173-15128192 MsG0680031148.01.T01:CDS 40.0%
! AGATTAACGGACAATCCAGA+AGG + Chr6:15128012-15128031 None:intergenic 40.0%
! ATTTTGCTTGTACAGTCCTC+AGG - Chr6:15129946-15129965 MsG0680031148.01.T01:intron 40.0%
! GGTCTGTGGAATTTCTGTTT+TGG - Chr6:15127589-15127608 MsG0680031148.01.T01:intron 40.0%
! TCTGAGGTAGTGTAATCACA+TGG + Chr6:15129514-15129533 None:intergenic 40.0%
! TTTTTCATGCATCCAGGGTT+GGG - Chr6:15128626-15128645 MsG0680031148.01.T01:intron 40.0%
!! AAATACTGACTTCAGTTCCG+GGG - Chr6:15127568-15127587 MsG0680031148.01.T01:intron 40.0%
!! ATAATACTGGCCTTGCACAA+AGG + Chr6:15129430-15129449 None:intergenic 40.0%
!! CAGGTTTGTTGGAAGTTTGA+AGG - Chr6:15126726-15126745 MsG0680031148.01.T01:intron 40.0%
!! GGAGTATGCTTTTTGATCAG+TGG + Chr6:15129482-15129501 None:intergenic 40.0%
!! GTTTTGCTTTGAGTCTTGTC+TGG - Chr6:15127055-15127074 MsG0680031148.01.T01:intron 40.0%
!!! CTTTCCTTTTTTCAAGCACG+GGG - Chr6:15128044-15128063 MsG0680031148.01.T01:intron 40.0%
AACAGAAATTCCACAGACCC+CGG + Chr6:15127588-15127607 None:intergenic 45.0%
AAGCATTCGAAGTTCCTTGC+AGG + Chr6:15130094-15130113 None:intergenic 45.0%
ACCACCTTGCTGACATTGTT+GGG - Chr6:15128870-15128889 MsG0680031148.01.T01:intron 45.0%
ACCAGTGAGGTTTAACTCGT+CGG + Chr6:15127187-15127206 None:intergenic 45.0%
ACCATCGATGGAAGTTCAGA+TGG - Chr6:15128357-15128376 MsG0680031148.01.T01:intron 45.0%
ACGGCTAGACATTCTCGTAA+AGG - Chr6:15128135-15128154 MsG0680031148.01.T01:CDS 45.0%
CACCTAGACTGTCAAGGAAA+GGG - Chr6:15128082-15128101 MsG0680031148.01.T01:intron 45.0%
CGAAACCCTAACACAGTTGA+AGG + Chr6:15125744-15125763 None:intergenic 45.0%
CGACATATCTCCAACGTAAC+TGG + Chr6:15125984-15126003 None:intergenic 45.0%
CGGTACAGGGACAAATTTGA+TGG + Chr6:15124130-15124149 None:intergenic 45.0%
CTCTCTGAATTCGATTGAGC+AGG - Chr6:15125860-15125879 MsG0680031148.01.T01:CDS 45.0%
CTGATGTTTGTGTCAGAGGA+AGG + Chr6:15128452-15128471 None:intergenic 45.0%
CTGTAATGCCCGTCTACTTA+TGG + Chr6:15127936-15127955 None:intergenic 45.0%
CTTTGCATAGCTGATGGCTA+TGG - Chr6:15129049-15129068 MsG0680031148.01.T01:intron 45.0%
GATGTTTGTGTCAGAGGAAG+GGG + Chr6:15128450-15128469 None:intergenic 45.0%
GATTGAATCGCTCGAGTTCA+CGG + Chr6:15125934-15125953 None:intergenic 45.0%
GCAAAGGGGCTAAAACATAG+GGG + Chr6:15124259-15124278 None:intergenic 45.0%
GCAAATTACACAAGCACCTG+AGG + Chr6:15129965-15129984 None:intergenic 45.0%
GCACAACTATCTCTGCATAG+CGG + Chr6:15126374-15126393 None:intergenic 45.0%
GCCTATCTATTTCGCAAAGC+TGG + Chr6:15128230-15128249 None:intergenic 45.0%
GCCTCTGACCACTTTATTCT+TGG + Chr6:15127519-15127538 None:intergenic 45.0%
GCTATAGCACTCATGTGTAG+CGG + Chr6:15126286-15126305 None:intergenic 45.0%
TAAACACACACACAGTCCCA+TGG + Chr6:15126974-15126993 None:intergenic 45.0%
TCAGTGAAGAAGCTATTGCC+GGG + Chr6:15125642-15125661 None:intergenic 45.0%
TCTCTCTCTCTCTCTCTCTA+GGG - Chr6:15125692-15125711 MsG0680031148.01.T01:CDS 45.0%
TGAATAGGGCTCAGCTTTCT+GGG - Chr6:15127788-15127807 MsG0680031148.01.T01:intron 45.0%
TGAGCAGGTTGTAAGGTTGA+AGG - Chr6:15125875-15125894 MsG0680031148.01.T01:CDS 45.0%
TTCCCTTTCCTTGACAGTCT+AGG + Chr6:15128087-15128106 None:intergenic 45.0%
TTTACGAGAATGTCTAGCCG+TGG + Chr6:15128136-15128155 None:intergenic 45.0%
! AAAGTTCTCCGATGGTGATG+CGG - Chr6:15128497-15128516 MsG0680031148.01.T01:intron 45.0%
! AGCTTTCTGGGAGTGATATG+TGG - Chr6:15127800-15127819 MsG0680031148.01.T01:intron 45.0%
! ATGTCCATGGTCGTAATGGA+GGG + Chr6:15130065-15130084 None:intergenic 45.0%
! CAGTTCAACAAGGGGGATTT+TGG - Chr6:15128584-15128603 MsG0680031148.01.T01:intron 45.0%
! CTTGTGTAATTTGCGGTGGT+CGG - Chr6:15129971-15129990 MsG0680031148.01.T01:intron 45.0%
! GACGATGGCCCCTATAATTT+TGG - Chr6:15128188-15128207 MsG0680031148.01.T01:CDS 45.0%
! GTTTTTCATGCATCCAGGGT+TGG - Chr6:15128625-15128644 MsG0680031148.01.T01:intron 45.0%
! TTGTGTAATTTGCGGTGGTC+GGG - Chr6:15129972-15129991 MsG0680031148.01.T01:intron 45.0%
!! AAAAAAAGTAAAATTAAAAA+AGG + Chr6:15125837-15125856 None:intergenic 5.0%
!! AATAAAAATATAAAAAATTC+TGG - Chr6:15124495-15124514 MsG0680031148.01.T01:CDS 5.0%
!! ATTCTTAAAAAAAAATATAA+CGG + Chr6:15127687-15127706 None:intergenic 5.0%
!! TTAATAAAAATGAAAAAATA+TGG - Chr6:15124528-15124547 MsG0680031148.01.T01:CDS 5.0%
!!! AATTCTAATTAAAATTTTAA+TGG - Chr6:15124925-15124944 MsG0680031148.01.T01:intron 5.0%
!!! AATTTTAATTAGAATTTTAA+TGG + Chr6:15124921-15124940 None:intergenic 5.0%
AACGGTTAAGGAGGAGCTAG+AGG + Chr6:15127669-15127688 None:intergenic 50.0%
AAGGCCCAACAATGTCAGCA+AGG + Chr6:15128877-15128896 None:intergenic 50.0%
ACAATCCAGAAGGACACACG+TGG + Chr6:15128002-15128021 None:intergenic 50.0%
ACGGTTAAGGAGGAGCTAGA+GGG + Chr6:15127668-15127687 None:intergenic 50.0%
ATCTCCAACGTAACTGGCAC+CGG + Chr6:15125978-15125997 None:intergenic 50.0%
ATGGACATGCACTTCCTGCA+AGG - Chr6:15130077-15130096 MsG0680031148.01.T01:intron 50.0%
CAATCCAGAAGGACACACGT+GGG + Chr6:15128001-15128020 None:intergenic 50.0%
CACCACCTTGCTGACATTGT+TGG - Chr6:15128869-15128888 MsG0680031148.01.T01:intron 50.0%
CAGACGCATACTACTCGATG+TGG + Chr6:15126440-15126459 None:intergenic 50.0%
CATGTCCATGGTCGTAATGG+AGG + Chr6:15130066-15130085 None:intergenic 50.0%
CCACCTAGACTGTCAAGGAA+AGG - Chr6:15128081-15128100 MsG0680031148.01.T01:intron 50.0%
CCTTTCCTTGACAGTCTAGG+TGG + Chr6:15128084-15128103 None:intergenic 50.0%
CGAGTGGTTGCAACAGTAAG+CGG - Chr6:15125905-15125924 MsG0680031148.01.T01:CDS 50.0%
CGTATCCACCTAGACTGTCA+AGG - Chr6:15128076-15128095 MsG0680031148.01.T01:intron 50.0%
CTCTCTCTCTCTCTCTCTCT+AGG - Chr6:15125679-15125698 MsG0680031148.01.T01:CDS 50.0%
CTGAATAGGGCTCAGCTTTC+TGG - Chr6:15127787-15127806 MsG0680031148.01.T01:intron 50.0%
GACTCCCCGTGCTTGAAAAA+AGG + Chr6:15128051-15128070 None:intergenic 50.0%
GCCATCTGAACTTCCATCGA+TGG + Chr6:15128361-15128380 None:intergenic 50.0%
GCTGCTGAAAAGTTCTCCGA+TGG - Chr6:15128489-15128508 MsG0680031148.01.T01:intron 50.0%
GGCAGGGCAGATATAACGAA+GGG + Chr6:15127370-15127389 None:intergenic 50.0%
GTGCATGTCCATGGTCGTAA+TGG + Chr6:15130069-15130088 None:intergenic 50.0%
TAATCCCACGTGTGTCCTTC+TGG - Chr6:15127994-15128013 MsG0680031148.01.T01:intron 50.0%
TACAGTCTTCAACCCAACGG+TGG + Chr6:15126797-15126816 None:intergenic 50.0%
! GGAGAACTTTTCAGCAGCAC+TGG + Chr6:15128487-15128506 None:intergenic 50.0%
! GGTGCTTGTGTAATTTGCGG+TGG - Chr6:15129967-15129986 MsG0680031148.01.T01:intron 50.0%
! GGTTGAAGGTATGGATCGAG+TGG - Chr6:15125889-15125908 MsG0680031148.01.T01:CDS 50.0%
! TTGCAGGAAGTGCATGTCCA+TGG + Chr6:15130078-15130097 None:intergenic 50.0%
!! GTGGAGTCTGAGTTTGCTGA+AGG - Chr6:15127258-15127277 MsG0680031148.01.T01:CDS 50.0%
!!! ACAAGGGGGATTTTGGAGTG+CGG - Chr6:15128591-15128610 MsG0680031148.01.T01:intron 50.0%
!!! GGATTTTGGAGTGCGGACAT+CGG - Chr6:15128598-15128617 MsG0680031148.01.T01:intron 50.0%
ACCCATGTGGCATGCCACAT+GGG + Chr6:15124319-15124338 None:intergenic 55.0%
CGGCAGGGCAGATATAACGA+AGG + Chr6:15127371-15127390 None:intergenic 55.0%
CGGTTAAGGAGGAGCTAGAG+GGG + Chr6:15127667-15127686 None:intergenic 55.0%
GACGGGCATTACAGTCCTGT+AGG - Chr6:15127942-15127961 MsG0680031148.01.T01:intron 55.0%
GCCCAACAATGTCAGCAAGG+TGG + Chr6:15128874-15128893 None:intergenic 55.0%
GCCGACGAGTTAAACCTCAC+TGG - Chr6:15127183-15127202 MsG0680031148.01.T01:intron 55.0%
TACCCATGTGGCATGCCACA+TGG + Chr6:15124320-15124339 None:intergenic 55.0%
TGGACCCTCCATTACGACCA+TGG - Chr6:15130058-15130077 MsG0680031148.01.T01:intron 55.0%
!! ATGTGGTGGGCTTCTCTGTG+TGG - Chr6:15127239-15127258 MsG0680031148.01.T01:intron 55.0%
CTCTGCGATCAACCCAACCC+TGG + Chr6:15128641-15128660 None:intergenic 60.0%
GACTTCAGTTCCGGGGTCTG+TGG - Chr6:15127575-15127594 MsG0680031148.01.T01:intron 60.0%
GCCCATGTGGCATGCCACAT+GGG - Chr6:15124315-15124334 MsG0680031148.01.T01:intron 60.0%
TTGACCGGTCAACGCCCATG+TGG - Chr6:15124302-15124321 MsG0680031148.01.T01:intron 60.0%
! CGTTCCGGTGCCAGTTACGT+TGG - Chr6:15125971-15125990 MsG0680031148.01.T01:CDS 60.0%
!! CATGCCACATGGGCGTTGAC+CGG + Chr6:15124309-15124328 None:intergenic 60.0%
CGCCCATGTGGCATGCCACA+TGG - Chr6:15124314-15124333 MsG0680031148.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 15123971 15130134 15123971 ID=MsG0680031148.01;Name=MsG0680031148.01
Chr6 mRNA 15123971 15130134 15123971 ID=MsG0680031148.01.T01;Parent=MsG0680031148.01;Name=MsG0680031148.01.T01;_AED=0.36;_eAED=0.38;_QI=0|0|0|0.85|0.66|0.71|7|0|510
Chr6 exon 15130101 15130134 15130101 ID=MsG0680031148.01.T01:exon:10225;Parent=MsG0680031148.01.T01
Chr6 exon 15128084 15128223 15128084 ID=MsG0680031148.01.T01:exon:10224;Parent=MsG0680031148.01.T01
Chr6 exon 15127243 15127376 15127243 ID=MsG0680031148.01.T01:exon:10223;Parent=MsG0680031148.01.T01
Chr6 exon 15126471 15126651 15126471 ID=MsG0680031148.01.T01:exon:10222;Parent=MsG0680031148.01.T01
Chr6 exon 15125446 15126045 15125446 ID=MsG0680031148.01.T01:exon:10221;Parent=MsG0680031148.01.T01
Chr6 exon 15124495 15124705 15124495 ID=MsG0680031148.01.T01:exon:10220;Parent=MsG0680031148.01.T01
Chr6 exon 15123971 15124203 15123971 ID=MsG0680031148.01.T01:exon:10219;Parent=MsG0680031148.01.T01
Chr6 CDS 15130101 15130134 15130101 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15128084 15128223 15128084 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15127243 15127376 15127243 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15126471 15126651 15126471 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15125446 15126045 15125446 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15124495 15124705 15124495 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Chr6 CDS 15123971 15124203 15123971 ID=MsG0680031148.01.T01:cds;Parent=MsG0680031148.01.T01
Gene Sequence

>MsG0680031148.01.T01

ATGAAATCAATTGATGATGACGATATGGTAATTGGTTGTAAGGTTGAAGGTATGGATCGAGTGGTTGCAACAGTAAGCGGTTACCGTGAACTCGAGCGATTCAATCTTATTAAGCTCATTTCGCGTTCCGGTGCCAGTTACGTTGGAGATATGTCGAAGTCAATTACTCATCTGGTTTGTTGGAAGTTTGAAGGAAAGAAGTATGACATTGCCCGTAAGTTAGGAATATATGTTGTCAACCACCGTTGGGTTGAAGACTGTATAAAGGAAGGAAGGCGTGTCCCAGAAGATTCTTATATCCTGCAAAGTGGACATGAAGTAGGGCCATTATTAATGGAAGTTCCAGTCAATGTTCAAGCAAGTACCTTATCCAAGAATAAAGTGGTCAGAGGCAGATCATGTGATATTGTGTCCGAAAGGCAAAATACTGACTTCAGTTCCGGGGTCTGTGGAATTTCTGTTTTGGAAGATTCTTCTTTACTGAAACAGCACGGGGAGTCAAGTTCGTATCCACCTAGACTGTCAAGGAAAGGGAAAAGAAATAGAGAAAATGATGTTAGTACCACGGCTAGACATTCTCGTAAAGGAAGAAGGGTTGTGAAAAATGATGGTGAAGTGACGATGGCCCCTATAATTTTGGATTTAAGCACAGACGACCAGCTTTGCGAAATAGATAGGCAAGACACTGAAGCTGCAGCTACATCTACCCATTCTCGCCATGTCAATATTGACAATATTCAAGAAAATAGTGAAGGACTTGATGCTGAACTATCTAGTCAAAGTAGAACCATCGATGGAAGTTCAGATGGCATTGAGCAGAACAGAGATTCAAATCATATATCTACTCTCAGAAATTCAAATTTGTTTATAGAAGATCCCCTTCCTCTGACACAAACATCAGTAGATTTATGTTCCAGTGCTGCTGAAAAGTTCTCCGATGGTGATGCGGTTGATAATTTTGATGACTCCCCTACTTCAAATGAGTTGTCATGTGTCATATGTTGGACAGATTTCAGTTCAACAAGGGGGATTTTGGAGTGCGGACATCGGTTTTGTTTTTCATGCATCCAGGGTTGGGTTGATCGCAGAAAAGCAATGGGGAAAGTTTCAAACTGTCCTTTGTGCAAGGCCAGTATTATGAAGATCATGAAAGTTGAGCATGCAGACACCACTGATCAAAAAGCATACTCCCAGACAATTCCATGTGATTACACTACCTCAGATTTTTGTATCCCAATTGATCAAGAATTTCCAGACAATATCTTAGAGGTATGCTTATCCATATTAAACTATATTTATTTTTATGCATTACTGGAGTATAATTTGTGTCATTTTGTGACTTGTATTTTGCTTGTACAGTCCTCAGGTGCTTGTGTAATTTGCGGTGGTCGGGAACCTGAAGATCTACTTGAGAATTGTGATGTTTGTCGATGTCGAAGAATTCATTCTTATTGCATGGACCCTCCATTACGACCATGGACATGCACTTCCTGCAAGGAACTTCGAATGCTTTATCGTAACCGCTTATATTAG
Protein sequence

>MsG0680031148.01.T01

MKSIDDDDMVIGCKVEGMDRVVATVSGYRELERFNLIKLISRSGASYVGDMSKSITHLVCWKFEGKKYDIARKLGIYVVNHRWVEDCIKEGRRVPEDSYILQSGHEVGPLLMEVPVNVQASTLSKNKVVRGRSCDIVSERQNTDFSSGVCGISVLEDSSLLKQHGESSSYPPRLSRKGKRNRENDVSTTARHSRKGRRVVKNDGEVTMAPIILDLSTDDQLCEIDRQDTEAAATSTHSRHVNIDNIQENSEGLDAELSSQSRTIDGSSDGIEQNRDSNHISTLRNSNLFIEDPLPLTQTSVDLCSSAAEKFSDGDAVDNFDDSPTSNELSCVICWTDFSSTRGILECGHRFCFSCIQGWVDRRKAMGKVSNCPLCKASIMKIMKVEHADTTDQKAYSQTIPCDYTTSDFCIPIDQEFPDNILEVCLSILNYIYFYALLEYNLCHFVTCILLVQSSGACVICGGREPEDLLENCDVCRCRRIHSYCMDPPLRPWTCTSCKELRMLYRNRLY*