Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017588.01.T01 | XP_003603595.1 | 97.612 | 712 | 12 | 2 | 1 | 707 | 1 | 712 | 0 | 1427 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017588.01.T01 | Q9AQW1 | 30.769 | 455 | 288 | 7 | 255 | 691 | 310 | 755 | 8.16E-63 | 226 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017588.01.T01 | G7J2X7 | 97.612 | 712 | 12 | 2 | 1 | 707 | 1 | 712 | 0.0 | 1427 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048738.01 | MsG0380017588.01 | 0.877413 | 6.409540e-69 | 3.220295e-65 |
MsG0080048797.01 | MsG0380017588.01 | 0.843939 | 1.029175e-58 | 1.635919e-55 |
MsG0080048922.01 | MsG0380017588.01 | 0.817416 | 3.335575e-52 | 2.427758e-49 |
MsG0080049008.01 | MsG0380017588.01 | 0.823375 | 1.432494e-53 | 1.231132e-50 |
MsG0180000096.01 | MsG0380017588.01 | 0.800805 | 1.213218e-48 | 5.701783e-46 |
MsG0180000608.01 | MsG0380017588.01 | 0.808820 | 2.566830e-50 | 1.482362e-47 |
MsG0180001169.01 | MsG0380017588.01 | 0.828594 | 8.241030e-55 | 8.228436e-52 |
MsG0180001293.01 | MsG0380017588.01 | 0.829000 | 6.574006e-55 | 6.641705e-52 |
MsG0180001588.01 | MsG0380017588.01 | 0.865587 | 5.299232e-65 | 1.733402e-61 |
MsG0180001719.01 | MsG0380017588.01 | 0.845559 | 3.766935e-59 | 6.301793e-56 |
MsG0180002134.01 | MsG0380017588.01 | 0.828159 | 1.049619e-54 | 1.034875e-51 |
MsG0180002135.01 | MsG0380017588.01 | 0.813324 | 2.710997e-51 | 1.764940e-48 |
MsG0180002281.01 | MsG0380017588.01 | 0.800410 | 1.460214e-48 | 6.794490e-46 |
MsG0180002397.01 | MsG0380017588.01 | 0.808398 | 3.157850e-50 | 1.803767e-47 |
MsG0180002404.01 | MsG0380017588.01 | 0.822088 | 2.855439e-53 | 2.366176e-50 |
MsG0180003421.01 | MsG0380017588.01 | 0.835233 | 1.889971e-56 | 2.297201e-53 |
MsG0180003430.01 | MsG0380017588.01 | 0.806023 | 1.005856e-49 | 5.402203e-47 |
MsG0180003857.01 | MsG0380017588.01 | 0.837813 | 4.163982e-57 | 5.472181e-54 |
MsG0180003905.01 | MsG0380017588.01 | 0.914069 | 2.952397e-84 | 7.204310e-80 |
MsG0180004064.01 | MsG0380017588.01 | 0.826487 | 2.641248e-54 | 2.480341e-51 |
MsG0180004120.01 | MsG0380017588.01 | 0.874183 | 8.237906e-68 | 3.673183e-64 |
MsG0180004185.01 | MsG0380017588.01 | 0.806042 | 9.965180e-50 | 5.354618e-47 |
MsG0180004366.01 | MsG0380017588.01 | 0.802501 | 5.444965e-49 | 2.671445e-46 |
MsG0180004471.01 | MsG0380017588.01 | 0.843908 | 1.048711e-58 | 1.665384e-55 |
MsG0180004538.01 | MsG0380017588.01 | 0.830010 | 3.735074e-55 | 3.886768e-52 |
MsG0180004583.01 | MsG0380017588.01 | 0.824482 | 7.879748e-54 | 6.988440e-51 |
MsG0180004652.01 | MsG0380017588.01 | 0.862615 | 4.471193e-64 | 1.317430e-60 |
MsG0180004705.01 | MsG0380017588.01 | 0.812652 | 3.805981e-51 | 2.433577e-48 |
MsG0180004828.01 | MsG0380017588.01 | 0.866953 | 1.954913e-65 | 6.709698e-62 |
MsG0180005048.01 | MsG0380017588.01 | 0.821620 | 3.665848e-53 | 2.997492e-50 |
MsG0180005367.01 | MsG0380017588.01 | 0.807195 | 5.691577e-50 | 3.150157e-47 |
MsG0180005573.01 | MsG0380017588.01 | 0.810093 | 1.368083e-50 | 8.172222e-48 |
MsG0180005655.01 | MsG0380017588.01 | 0.837432 | 5.214925e-57 | 6.772800e-54 |
MsG0180005769.01 | MsG0380017588.01 | 0.852170 | 5.504402e-61 | 1.140401e-57 |
MsG0180005780.01 | MsG0380017588.01 | 0.856781 | 2.550512e-62 | 6.155946e-59 |
MsG0180005819.01 | MsG0380017588.01 | 0.846714 | 1.826041e-59 | 3.171463e-56 |
MsG0180006062.01 | MsG0380017588.01 | 0.812804 | 3.526012e-51 | 2.263395e-48 |
MsG0180006116.01 | MsG0380017588.01 | 0.812460 | 4.193290e-51 | 2.667866e-48 |
MsG0180006133.01 | MsG0380017588.01 | 0.822257 | 2.609922e-53 | 2.173219e-50 |
MsG0180006182.01 | MsG0380017588.01 | 0.816108 | 6.554638e-52 | 4.602821e-49 |
MsG0180006183.01 | MsG0380017588.01 | 0.814708 | 1.342550e-51 | 9.074264e-49 |
MsG0380011846.01 | MsG0380017588.01 | 0.826573 | 2.518955e-54 | 2.371334e-51 |
MsG0380012367.01 | MsG0380017588.01 | 0.829133 | 6.102967e-55 | 6.190637e-52 |
MsG0380012818.01 | MsG0380017588.01 | 0.878610 | 2.443015e-69 | 1.284030e-65 |
MsG0380014542.01 | MsG0380017588.01 | 0.814787 | 1.289722e-51 | 8.735504e-49 |
MsG0380014544.01 | MsG0380017588.01 | 0.843861 | 1.080184e-58 | 1.712752e-55 |
MsG0380014666.01 | MsG0380017588.01 | 0.844036 | 9.691015e-59 | 1.545094e-55 |
MsG0380014807.01 | MsG0380017588.01 | 0.844720 | 6.348453e-59 | 1.034072e-55 |
MsG0380015219.01 | MsG0380017588.01 | 0.829651 | 4.569009e-55 | 4.705636e-52 |
MsG0380015340.01 | MsG0380017588.01 | 0.833678 | 4.644990e-56 | 5.387676e-53 |
MsG0380015370.01 | MsG0380017588.01 | 0.823793 | 1.143682e-53 | 9.947844e-51 |
MsG0380015402.01 | MsG0380017588.01 | 0.895900 | 6.173235e-76 | 6.524977e-72 |
MsG0380015656.01 | MsG0380017588.01 | 0.860818 | 1.584523e-63 | 4.388398e-60 |
MsG0380015871.01 | MsG0380017588.01 | 0.825541 | 4.432411e-54 | 4.051762e-51 |
MsG0380016031.01 | MsG0380017588.01 | 0.835866 | 1.307756e-56 | 1.619800e-53 |
MsG0380016091.01 | MsG0380017588.01 | 0.829678 | 4.500139e-55 | 4.638494e-52 |
MsG0380016217.01 | MsG0380017588.01 | 0.812866 | 3.417757e-51 | 2.197529e-48 |
MsG0380016225.01 | MsG0380017588.01 | 0.806295 | 8.818422e-50 | 4.768951e-47 |
MsG0380016250.01 | MsG0380017588.01 | 0.839797 | 1.278239e-57 | 1.784789e-54 |
MsG0380016760.01 | MsG0380017588.01 | 0.808876 | 2.496176e-50 | 1.443694e-47 |
MsG0380016819.01 | MsG0380017588.01 | 0.807838 | 4.156287e-50 | 2.339205e-47 |
MsG0380017079.01 | MsG0380017588.01 | 0.854932 | 8.852567e-62 | 2.009576e-58 |
MsG0380017128.01 | MsG0380017588.01 | 0.865045 | 7.851030e-65 | 2.519375e-61 |
MsG0380017156.01 | MsG0380017588.01 | 0.806572 | 7.708609e-50 | 4.198331e-47 |
MsG0380017181.01 | MsG0380017588.01 | 0.855112 | 7.846274e-62 | 1.791744e-58 |
MsG0380017282.01 | MsG0380017588.01 | 0.802834 | 4.649258e-49 | 2.300662e-46 |
MsG0380017331.01 | MsG0380017588.01 | 0.830040 | 3.673871e-55 | 3.826335e-52 |
MsG0380017332.01 | MsG0380017588.01 | 0.872027 | 4.356995e-67 | 1.795253e-63 |
MsG0380017416.01 | MsG0380017588.01 | 0.808522 | 2.972392e-50 | 1.703290e-47 |
MsG0380017588.01 | MsG0380017605.01 | 0.815381 | 9.517097e-52 | 6.551419e-49 |
MsG0380017588.01 | MsG0380017696.01 | 0.863746 | 1.997383e-64 | 6.122155e-61 |
MsG0380017588.01 | MsG0380017700.01 | 0.834054 | 3.742180e-56 | 4.389873e-53 |
MsG0380017588.01 | MsG0380017826.01 | 0.876085 | 1.848127e-68 | 8.841839e-65 |
MsG0380017588.01 | MsG0380017932.01 | 0.829635 | 4.609534e-55 | 4.744957e-52 |
MsG0380017588.01 | MsG0380017967.01 | 0.807426 | 5.085532e-50 | 2.831677e-47 |
MsG0380017588.01 | MsG0480018111.01 | 0.805183 | 1.509243e-49 | 7.932717e-47 |
MsG0380017588.01 | MsG0480018228.01 | 0.878229 | 3.325093e-69 | 1.722711e-65 |
MsG0380017588.01 | MsG0480018362.01 | 0.805255 | 1.457818e-49 | 7.676227e-47 |
MsG0380017588.01 | MsG0480018486.01 | 0.842537 | 2.433558e-58 | 3.701523e-55 |
MsG0380017588.01 | MsG0480018767.01 | 0.848914 | 4.522296e-60 | 8.429082e-57 |
MsG0380017588.01 | MsG0480019669.01 | 0.816494 | 5.373272e-52 | 3.813010e-49 |
MsG0380017588.01 | MsG0480020366.01 | 0.802294 | 6.005406e-49 | 2.931120e-46 |
MsG0380017588.01 | MsG0480020398.01 | 0.885597 | 7.088146e-72 | 4.895776e-68 |
MsG0380017588.01 | MsG0480020856.01 | 0.806669 | 7.351416e-50 | 4.013581e-47 |
MsG0380017588.01 | MsG0480020937.01 | 0.830669 | 2.578209e-55 | 2.734922e-52 |
MsG0380017588.01 | MsG0480020970.01 | 0.804633 | 1.967431e-49 | 1.019481e-46 |
MsG0380017588.01 | MsG0480021100.01 | 0.830290 | 3.191942e-55 | 3.348522e-52 |
MsG0380017588.01 | MsG0480021224.01 | 0.804153 | 2.476294e-49 | 1.267488e-46 |
MsG0380017588.01 | MsG0480021301.01 | 0.854838 | 9.426822e-62 | 2.133473e-58 |
MsG0380017588.01 | MsG0480021486.01 | 0.851422 | 8.965753e-61 | 1.813940e-57 |
MsG0380017588.01 | MsG0480021704.01 | 0.800268 | 1.561081e-48 | 7.237539e-46 |
MsG0380017588.01 | MsG0480021740.01 | 0.857037 | 2.143752e-62 | 5.219754e-59 |
MsG0380017588.01 | MsG0480021755.01 | 0.801824 | 7.504956e-49 | 3.619276e-46 |
MsG0380017588.01 | MsG0480021773.01 | 0.844557 | 7.021317e-59 | 1.137878e-55 |
MsG0380017588.01 | MsG0480021827.01 | 0.828124 | 1.069996e-54 | 1.053894e-51 |
MsG0380017588.01 | MsG0480021902.01 | 0.847490 | 1.119321e-59 | 1.992859e-56 |
MsG0380017588.01 | MsG0480022302.01 | 0.845168 | 4.803818e-59 | 7.935905e-56 |
MsG0380017588.01 | MsG0480022307.01 | 0.822175 | 2.726694e-53 | 2.265026e-50 |
MsG0380017588.01 | MsG0480022320.01 | 0.826607 | 2.471843e-54 | 2.329226e-51 |
MsG0380017588.01 | MsG0480022682.01 | 0.810128 | 1.344473e-50 | 8.038585e-48 |
MsG0380017588.01 | MsG0480022784.01 | 0.838047 | 3.626194e-57 | 4.799659e-54 |
MsG0380017588.01 | MsG0480023414.01 | 0.872956 | 2.134994e-67 | 9.103000e-64 |
MsG0380017588.01 | MsG0480023424.01 | 0.829588 | 4.732520e-55 | 4.864948e-52 |
MsG0380017588.01 | MsG0480023426.01 | 0.839777 | 1.293153e-57 | 1.804481e-54 |
MsG0380017588.01 | MsG0480023484.01 | 0.818301 | 2.104778e-52 | 1.569562e-49 |
MsG0380017588.01 | MsG0480023626.01 | 0.880474 | 5.329024e-70 | 3.007410e-66 |
MsG0380017588.01 | MsG0480023663.01 | 0.814621 | 1.403484e-51 | 9.463855e-49 |
MsG0380017588.01 | MsG0480023706.01 | 0.910403 | 1.948778e-82 | 3.972513e-78 |
MsG0380017588.01 | MsG0480023774.01 | 0.811715 | 6.095304e-51 | 3.800582e-48 |
MsG0380017588.01 | MsG0480023842.01 | 0.819059 | 1.416661e-52 | 1.078790e-49 |
MsG0380017588.01 | MsG0480023913.01 | 0.850156 | 2.037404e-60 | 3.954296e-57 |
MsG0380017588.01 | MsG0480023996.01 | 0.810535 | 1.098125e-50 | 6.636372e-48 |
MsG0380017588.01 | MsG0480024002.01 | 0.830208 | 3.342056e-55 | 3.497953e-52 |
MsG0380017588.01 | MsG0480024019.01 | 0.835872 | 1.303111e-56 | 1.614382e-53 |
MsG0380017588.01 | MsG0580024158.01 | 0.864275 | 1.367115e-64 | 4.268090e-61 |
MsG0380017588.01 | MsG0580024276.01 | 0.847774 | 9.349787e-60 | 1.679586e-56 |
MsG0380017588.01 | MsG0580024773.01 | 0.807426 | 5.085532e-50 | 2.831677e-47 |
MsG0380017588.01 | MsG0580024835.01 | 0.809600 | 1.746149e-50 | 1.029715e-47 |
MsG0380017588.01 | MsG0580024954.01 | 0.808104 | 3.649101e-50 | 2.068173e-47 |
MsG0380017588.01 | MsG0580025186.01 | 0.809765 | 1.609395e-50 | 9.532216e-48 |
MsG0380017588.01 | MsG0580025464.01 | 0.804434 | 2.164226e-49 | 1.115747e-46 |
MsG0380017588.01 | MsG0580025504.01 | 0.837109 | 6.310303e-57 | 8.114532e-54 |
MsG0380017588.01 | MsG0580025633.01 | 0.818771 | 1.647446e-52 | 1.244587e-49 |
MsG0380017588.01 | MsG0580026029.01 | 0.852378 | 4.801915e-61 | 1.001452e-57 |
MsG0380017588.01 | MsG0580026343.01 | 0.887569 | 1.271367e-72 | 9.505228e-69 |
MsG0380017588.01 | MsG0580026446.01 | 0.877436 | 6.291708e-69 | 3.163642e-65 |
MsG0380017588.01 | MsG0580027854.01 | 0.836797 | 7.580204e-57 | 9.656651e-54 |
MsG0380017588.01 | MsG0580028330.01 | 0.805596 | 1.236965e-49 | 6.570667e-47 |
MsG0380017588.01 | MsG0580028364.01 | 0.835201 | 1.926296e-56 | 2.338940e-53 |
MsG0380017588.01 | MsG0580028927.01 | 0.838155 | 3.401582e-57 | 4.516386e-54 |
MsG0380017588.01 | MsG0580028955.01 | 0.867725 | 1.106962e-65 | 3.904043e-62 |
MsG0380017588.01 | MsG0580029157.01 | 0.802670 | 5.023887e-49 | 2.475528e-46 |
MsG0380017588.01 | MsG0580029591.01 | 0.815685 | 8.145580e-52 | 5.654317e-49 |
MsG0380017588.01 | MsG0580029696.01 | 0.816503 | 5.348424e-52 | 3.796325e-49 |
MsG0380017588.01 | MsG0580030141.01 | 0.853204 | 2.788446e-61 | 5.978158e-58 |
MsG0380017588.01 | MsG0580030179.01 | 0.816543 | 5.239026e-52 | 3.722813e-49 |
MsG0380017588.01 | MsG0680031006.01 | 0.848603 | 5.516731e-60 | 1.017760e-56 |
MsG0380017588.01 | MsG0680031148.01 | 0.835394 | 1.721020e-56 | 2.101921e-53 |
MsG0380017588.01 | MsG0680031356.01 | 0.811856 | 5.678632e-51 | 3.554118e-48 |
MsG0380017588.01 | MsG0680031686.01 | 0.803672 | 3.117602e-49 | 1.576050e-46 |
MsG0380017588.01 | MsG0680033645.01 | 0.810265 | 1.256175e-50 | 7.537504e-48 |
MsG0380017588.01 | MsG0680034415.01 | 0.814083 | 1.845048e-51 | 1.226153e-48 |
MsG0380017588.01 | MsG0680035776.01 | 0.868708 | 5.340372e-66 | 1.951112e-62 |
MsG0380017588.01 | MsG0680035792.01 | 0.862665 | 4.313213e-64 | 1.273121e-60 |
MsG0380017588.01 | MsG0680035905.01 | 0.826771 | 2.258937e-54 | 2.138614e-51 |
MsG0380017588.01 | MsG0780036015.01 | 0.802846 | 4.622403e-49 | 2.288029e-46 |
MsG0380017588.01 | MsG0780036553.01 | 0.872021 | 4.378215e-67 | 1.803450e-63 |
MsG0380017588.01 | MsG0780038393.01 | 0.851587 | 8.051156e-61 | 1.637394e-57 |
MsG0380017588.01 | MsG0780038647.01 | 0.850046 | 2.187282e-60 | 4.230309e-57 |
MsG0380017588.01 | MsG0780038736.01 | 0.824137 | 9.500145e-54 | 8.342937e-51 |
MsG0380017588.01 | MsG0780039536.01 | 0.819232 | 1.294074e-52 | 9.901115e-50 |
MsG0380017588.01 | MsG0780040118.01 | 0.818483 | 1.915060e-52 | 1.435281e-49 |
MsG0380017588.01 | MsG0780040276.01 | 0.815531 | 8.813031e-52 | 6.091788e-49 |
MsG0380017588.01 | MsG0780040364.01 | 0.815734 | 7.944329e-52 | 5.522122e-49 |
MsG0380017588.01 | MsG0780040554.01 | 0.815193 | 1.047811e-51 | 7.175397e-49 |
MsG0380017588.01 | MsG0780040641.01 | 0.857369 | 1.710909e-62 | 4.212840e-59 |
MsG0380017588.01 | MsG0780040830.01 | 0.844774 | 6.137965e-59 | 1.001507e-55 |
MsG0380017588.01 | MsG0780040899.01 | 0.854954 | 8.721513e-62 | 1.981401e-58 |
MsG0380017588.01 | MsG0780040978.01 | 0.920196 | 1.736675e-87 | 5.812807e-83 |
MsG0380017588.01 | MsG0780040990.01 | 0.906248 | 1.817987e-80 | 3.051196e-76 |
MsG0380017588.01 | MsG0780041219.01 | 0.843922 | 1.040206e-58 | 1.652576e-55 |
MsG0380017588.01 | MsG0780041232.01 | 0.854160 | 1.481153e-61 | 3.278317e-58 |
MsG0380017588.01 | MsG0780041273.01 | 0.816410 | 5.610549e-52 | 3.972382e-49 |
MsG0380017588.01 | MsG0780041354.01 | 0.824863 | 6.409576e-54 | 5.747647e-51 |
MsG0380017588.01 | MsG0780041359.01 | 0.813845 | 2.082331e-51 | 1.374924e-48 |
MsG0380017588.01 | MsG0780041560.01 | 0.843779 | 1.135714e-58 | 1.795995e-55 |
MsG0380017588.01 | MsG0780041591.01 | 0.830335 | 3.111489e-55 | 3.268562e-52 |
MsG0380017588.01 | MsG0880042392.01 | 0.831708 | 1.432572e-55 | 1.567228e-52 |
MsG0380017588.01 | MsG0880042833.01 | 0.890823 | 6.954119e-74 | 5.942109e-70 |
MsG0380017588.01 | MsG0880043684.01 | 0.852174 | 5.488303e-61 | 1.137211e-57 |
MsG0380017588.01 | MsG0880043714.01 | 0.825559 | 4.388997e-54 | 4.014116e-51 |
MsG0380017588.01 | MsG0880043907.01 | 0.851676 | 7.597784e-61 | 1.549617e-57 |
MsG0380017588.01 | MsG0880044139.01 | 0.826501 | 2.621222e-54 | 2.462534e-51 |
MsG0380017588.01 | MsG0880044356.01 | 0.832114 | 1.136933e-55 | 1.258552e-52 |
MsG0380017588.01 | MsG0880044437.01 | 0.835835 | 1.331262e-56 | 1.647433e-53 |
MsG0380017588.01 | MsG0880045015.01 | 0.826409 | 2.756985e-54 | 2.583485e-51 |
MsG0380017588.01 | MsG0880045356.01 | 0.892592 | 1.376847e-74 | 1.266927e-70 |
MsG0380017588.01 | MsG0880045439.01 | 0.843802 | 1.119756e-58 | 1.772021e-55 |
MsG0380017588.01 | MsG0880045584.01 | 0.844517 | 7.199615e-59 | 1.165248e-55 |
MsG0380017588.01 | MsG0880045612.01 | 0.826932 | 2.068033e-54 | 1.967276e-51 |
MsG0380017588.01 | MsG0880045647.01 | 0.872532 | 2.958720e-67 | 1.242614e-63 |
MsG0380017588.01 | MsG0880045761.01 | -0.808744 | 2.663939e-50 | 1.535366e-47 |
MsG0380017588.01 | MsG0880045836.01 | 0.829838 | 4.115451e-55 | 4.262244e-52 |
MsG0380017588.01 | MsG0880045879.01 | 0.803297 | 3.728178e-49 | 1.866674e-46 |
MsG0380017588.01 | MsG0880045963.01 | 0.807095 | 5.974759e-50 | 3.298245e-47 |
MsG0380017588.01 | MsG0880045989.01 | 0.812840 | 3.462153e-51 | 2.224568e-48 |
MsG0380017588.01 | MsG0880046904.01 | 0.845233 | 4.615884e-59 | 7.641500e-56 |
MsG0380017588.01 | MsG0880046905.01 | 0.811405 | 7.117192e-51 | 4.401920e-48 |
MsG0380017588.01 | MsG0880046906.01 | 0.841265 | 5.276440e-58 | 7.710911e-55 |
MsG0380017588.01 | MsG0880046945.01 | 0.803502 | 3.381103e-49 | 1.701933e-46 |
MsG0380017588.01 | MsG0880047090.01 | 0.810904 | 9.139222e-51 | 5.578326e-48 |
MsG0380017588.01 | MsG0880047146.01 | 0.814740 | 1.321098e-51 | 8.936802e-49 |
MsG0380017588.01 | MsG0880047311.01 | 0.818993 | 1.466472e-52 | 1.114805e-49 |
MsG0380017588.01 | MsG0880047331.01 | 0.841682 | 4.097281e-58 | 6.065836e-55 |
MsG0380017588.01 | MsG0880047414.01 | 0.827654 | 1.388407e-54 | 1.348712e-51 |
MsG0380017588.01 | MsG0880047649.01 | 0.830642 | 2.618038e-55 | 2.774864e-52 |
MsG0380017588.01 | MsG0880047704.01 | 0.803437 | 3.486978e-49 | 1.752252e-46 |
MsG0280006717.01 | MsG0380017588.01 | 0.879690 | 1.014336e-69 | 5.552123e-66 |
MsG0280007003.01 | MsG0380017588.01 | 0.816206 | 6.231364e-52 | 4.387703e-49 |
MsG0280007092.01 | MsG0380017588.01 | 0.806813 | 6.854509e-50 | 3.756528e-47 |
MsG0280007667.01 | MsG0380017588.01 | 0.841513 | 4.539361e-58 | 6.685795e-55 |
MsG0280009216.01 | MsG0380017588.01 | 0.812326 | 4.484934e-51 | 2.843133e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017588.01.T01 | MTR_3g109450 | 97.612 | 712 | 12 | 2 | 1 | 707 | 1 | 712 | 0.0 | 1427 |
MsG0380017588.01.T01 | MTR_2g102050 | 54.690 | 565 | 224 | 5 | 167 | 707 | 204 | 760 | 0.0 | 585 |
MsG0380017588.01.T01 | MTR_4g012430 | 55.224 | 402 | 168 | 4 | 264 | 660 | 117 | 511 | 6.51e-146 | 436 |
MsG0380017588.01.T01 | MTR_4g012430 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.09e-13 | 73.6 |
MsG0380017588.01.T01 | MTR_8g006850 | 28.634 | 454 | 289 | 9 | 272 | 701 | 279 | 721 | 9.23e-54 | 197 |
MsG0380017588.01.T01 | MTR_8g006850 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 3.85e-14 | 76.6 |
MsG0380017588.01.T01 | MTR_7g081705 | 28.728 | 456 | 290 | 6 | 266 | 701 | 401 | 841 | 3.53e-52 | 194 |
MsG0380017588.01.T01 | MTR_7g081705 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.22e-14 | 77.4 |
MsG0380017588.01.T01 | MTR_5g022530 | 29.688 | 448 | 269 | 8 | 272 | 695 | 206 | 631 | 5.31e-52 | 191 |
MsG0380017588.01.T01 | MTR_1g112850 | 24.215 | 764 | 494 | 16 | 1 | 706 | 1 | 737 | 1.22e-49 | 186 |
MsG0380017588.01.T01 | MTR_2g048360 | 29.247 | 465 | 300 | 9 | 250 | 697 | 179 | 631 | 5.83e-46 | 174 |
MsG0380017588.01.T01 | MTR_8g091250 | 26.308 | 669 | 369 | 22 | 1 | 591 | 1 | 623 | 1.82e-41 | 161 |
MsG0380017588.01.T01 | MTR_4g127620 | 28.916 | 332 | 213 | 8 | 272 | 586 | 337 | 662 | 1.12e-33 | 138 |
MsG0380017588.01.T01 | MTR_4g127620 | 36.134 | 119 | 70 | 3 | 1 | 113 | 1 | 119 | 7.88e-12 | 69.3 |
MsG0380017588.01.T01 | MTR_3g088190 | 24.229 | 454 | 306 | 7 | 272 | 696 | 456 | 900 | 2.69e-33 | 137 |
MsG0380017588.01.T01 | MTR_3g078830 | 27.749 | 382 | 216 | 10 | 257 | 585 | 307 | 681 | 3.23e-33 | 137 |
MsG0380017588.01.T01 | MTR_5g087740 | 27.427 | 412 | 217 | 11 | 270 | 629 | 308 | 689 | 7.05e-31 | 129 |
MsG0380017588.01.T01 | MTR_5g098980 | 25.537 | 419 | 274 | 8 | 283 | 692 | 367 | 756 | 2.04e-30 | 128 |
MsG0380017588.01.T01 | MTR_3g115120 | 22.779 | 439 | 288 | 10 | 269 | 695 | 280 | 679 | 8.30e-26 | 113 |
MsG0380017588.01.T01 | MTR_2g036920 | 26.724 | 348 | 210 | 9 | 270 | 583 | 503 | 839 | 2.31e-25 | 112 |
MsG0380017588.01.T01 | MTR_2g036920 | 50.847 | 59 | 29 | 0 | 1 | 59 | 1 | 59 | 2.66e-12 | 70.9 |
MsG0380017588.01.T01 | MTR_2g036920 | 26.724 | 348 | 210 | 9 | 270 | 583 | 474 | 810 | 2.71e-25 | 112 |
MsG0380017588.01.T01 | MTR_2g036920 | 50.847 | 59 | 29 | 0 | 1 | 59 | 1 | 59 | 2.58e-12 | 70.9 |
MsG0380017588.01.T01 | MTR_3g096950 | 23.362 | 351 | 253 | 4 | 353 | 696 | 434 | 775 | 9.39e-21 | 97.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017588.01.T01 | AT5G25590 | 54.789 | 783 | 265 | 14 | 1 | 706 | 1 | 771 | 0.0 | 730 |
MsG0380017588.01.T01 | AT1G52320 | 63.122 | 442 | 159 | 3 | 257 | 695 | 10 | 450 | 0.0 | 567 |
MsG0380017588.01.T01 | AT1G52320 | 63.122 | 442 | 159 | 3 | 257 | 695 | 10 | 450 | 0.0 | 567 |
MsG0380017588.01.T01 | AT1G02110 | 28.753 | 473 | 296 | 7 | 249 | 701 | 250 | 701 | 1.10e-57 | 208 |
MsG0380017588.01.T01 | AT1G02110 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 5.78e-13 | 72.8 |
MsG0380017588.01.T01 | AT3G51290 | 29.955 | 444 | 283 | 5 | 272 | 703 | 202 | 629 | 4.26e-55 | 200 |
MsG0380017588.01.T01 | AT3G51290 | 29.955 | 444 | 283 | 5 | 272 | 703 | 202 | 629 | 6.00e-55 | 202 |
MsG0380017588.01.T01 | AT3G51290 | 29.505 | 444 | 279 | 6 | 272 | 703 | 202 | 623 | 1.56e-50 | 187 |
MsG0380017588.01.T01 | AT3G60320 | 29.128 | 436 | 285 | 9 | 266 | 685 | 351 | 778 | 1.07e-46 | 178 |
MsG0380017588.01.T01 | AT3G60320 | 45.946 | 111 | 56 | 2 | 1 | 111 | 1 | 107 | 7.08e-16 | 82.4 |
MsG0380017588.01.T01 | AT2G27090 | 25.036 | 695 | 406 | 21 | 1 | 600 | 1 | 675 | 5.88e-45 | 172 |
MsG0380017588.01.T01 | AT2G27090 | 25.036 | 695 | 406 | 21 | 1 | 600 | 1 | 675 | 5.88e-45 | 172 |
MsG0380017588.01.T01 | AT4G39790 | 26.984 | 630 | 361 | 20 | 1 | 573 | 9 | 596 | 4.06e-42 | 163 |
MsG0380017588.01.T01 | AT2G34670 | 28.539 | 445 | 278 | 10 | 271 | 695 | 250 | 674 | 2.48e-39 | 155 |
MsG0380017588.01.T01 | AT1G21740 | 24.105 | 531 | 350 | 10 | 199 | 696 | 432 | 942 | 4.43e-34 | 140 |
MsG0380017588.01.T01 | AT4G30130 | 25.299 | 668 | 390 | 21 | 1 | 586 | 1 | 641 | 7.60e-34 | 139 |
MsG0380017588.01.T01 | AT4G30130 | 25.299 | 668 | 390 | 21 | 1 | 586 | 1 | 641 | 7.60e-34 | 139 |
MsG0380017588.01.T01 | AT1G77500 | 25.792 | 442 | 290 | 7 | 272 | 696 | 451 | 871 | 7.69e-32 | 133 |
MsG0380017588.01.T01 | AT4G35240 | 24.208 | 442 | 278 | 8 | 274 | 695 | 423 | 827 | 2.20e-27 | 119 |
MsG0380017588.01.T01 | AT4G35240 | 24.208 | 442 | 278 | 8 | 274 | 695 | 423 | 827 | 2.20e-27 | 119 |
MsG0380017588.01.T01 | AT4G35240 | 24.208 | 442 | 278 | 8 | 274 | 695 | 423 | 827 | 2.31e-27 | 119 |
MsG0380017588.01.T01 | AT4G35240 | 24.208 | 442 | 278 | 8 | 274 | 695 | 423 | 827 | 2.31e-27 | 119 |
MsG0380017588.01.T01 | AT1G20530 | 23.519 | 574 | 358 | 18 | 1 | 558 | 1 | 509 | 4.02e-27 | 117 |
MsG0380017588.01.T01 | AT2G34670 | 26.940 | 464 | 259 | 17 | 158 | 576 | 121 | 549 | 7.34e-25 | 110 |
MsG0380017588.01.T01 | AT2G19090 | 26.857 | 350 | 213 | 6 | 270 | 586 | 385 | 724 | 1.33e-24 | 110 |
MsG0380017588.01.T01 | AT2G17110 | 25.079 | 315 | 224 | 3 | 274 | 576 | 313 | 627 | 1.79e-23 | 106 |
MsG0380017588.01.T01 | AT1G52320 | 34.921 | 252 | 91 | 9 | 1 | 184 | 1 | 247 | 9.46e-18 | 88.2 |
MsG0380017588.01.T01 | AT1G52320 | 34.921 | 252 | 91 | 9 | 1 | 184 | 1 | 247 | 9.46e-18 | 88.2 |
MsG0380017588.01.T01 | AT5G54480 | 23.601 | 411 | 267 | 12 | 292 | 695 | 345 | 715 | 2.44e-17 | 87.0 |
MsG0380017588.01.T01 | AT4G30130 | 36.508 | 126 | 77 | 1 | 351 | 476 | 398 | 520 | 1.15e-14 | 77.8 |
MsG0380017588.01.T01 | AT4G30130 | 36.508 | 126 | 77 | 1 | 351 | 476 | 398 | 520 | 1.15e-14 | 77.8 |
Find 186 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTATGGATATGGATAATA+TGG | 0.114095 | 3:-98176571 | MsG0380017588.01.T01:CDS |
GGGCTTGGATTGGTGGATTT+TGG | 0.116448 | 3:+98174490 | None:intergenic |
GGCTTGGGATTATTTCTTTA+TGG | 0.126467 | 3:-98176586 | MsG0380017588.01.T01:CDS |
AAACTTGTTGCTCTTGTTAT+TGG | 0.151747 | 3:-98175360 | MsG0380017588.01.T01:CDS |
GGATTATTTCTTTATGGATA+TGG | 0.176860 | 3:-98176580 | MsG0380017588.01.T01:CDS |
CAAATTGTGACTCCCATTCT+TGG | 0.206075 | 3:+98174628 | None:intergenic |
GTTCTAACCATCCTTAATTA+TGG | 0.212748 | 3:-98173832 | MsG0380017588.01.T01:three_prime_UTR |
AGAGAAGCAGGTGAGAAATT+AGG | 0.229302 | 3:+98176822 | None:intergenic |
GCGCCACCTTCTCCTCTATC+TGG | 0.241574 | 3:-98176654 | MsG0380017588.01.T01:CDS |
ATAACAAGAGCAACAAGTTT+TGG | 0.264787 | 3:+98175363 | None:intergenic |
AAATGTGCTTTCCATAATTA+AGG | 0.266395 | 3:+98173821 | None:intergenic |
TTCTAATTTCGCCGATGGTC+GGG | 0.270291 | 3:-98176187 | MsG0380017588.01.T01:CDS |
GAAGAGGCGGTGGAGGAGGG+AGG | 0.286829 | 3:+98176847 | None:intergenic |
AGAAACACATGCCACTGTTT+TGG | 0.288622 | 3:-98175827 | MsG0380017588.01.T01:CDS |
GGTGAGAATGTTGATGTTAA+TGG | 0.289655 | 3:-98176492 | MsG0380017588.01.T01:CDS |
GCCTTCGCCGCCGGTCATTC+CGG | 0.299872 | 3:-98177005 | MsG0380017588.01.T01:CDS |
CCCTTCGTTGTAAATGCTTC+TGG | 0.304621 | 3:+98174280 | None:intergenic |
TCCGCCTCCTCCACCGCCTT+TGG | 0.313457 | 3:-98176877 | MsG0380017588.01.T01:CDS |
CTCAACTTTCTCCGGTGTCT+TGG | 0.318035 | 3:+98176443 | None:intergenic |
ACAACTGAGAATCGCGAATA+TGG | 0.320972 | 3:+98175388 | None:intergenic |
GGAGGAAGAGGCGGTGGAGG+AGG | 0.326831 | 3:+98176843 | None:intergenic |
AACTTGTTGCTCTTGTTATT+GGG | 0.330220 | 3:-98175359 | MsG0380017588.01.T01:intron |
GGAGGAAGAGATGAAGTTAA+AGG | 0.341872 | 3:-98174364 | MsG0380017588.01.T01:CDS |
TGAGGTTGATGTGTATAATA+AGG | 0.342260 | 3:-98176424 | MsG0380017588.01.T01:CDS |
TGAGTTTAGAAGAGCAATTA+AGG | 0.371298 | 3:-98176328 | MsG0380017588.01.T01:CDS |
TCAACTTTCTCCGGTGTCTT+GGG | 0.378191 | 3:+98176444 | None:intergenic |
TTAGGAGGAAGAGGCGGTGG+AGG | 0.380955 | 3:+98176840 | None:intergenic |
GAACATATTCTCCCACATAT+TGG | 0.386881 | 3:+98174770 | None:intergenic |
TTTGAGAGCCATGGCATAAC+CGG | 0.391707 | 3:+98176986 | None:intergenic |
GCAGATTTCGCTAGCTCGTC+AGG | 0.404088 | 3:+98174432 | None:intergenic |
ACGACCGCACCGTGCAGCTT+TGG | 0.406384 | 3:-98174659 | MsG0380017588.01.T01:CDS |
TGATATTTCTCAAGATCATA+AGG | 0.409383 | 3:-98174700 | MsG0380017588.01.T01:CDS |
ATTCTAATTTCGCCGATGGT+CGG | 0.410137 | 3:-98176188 | MsG0380017588.01.T01:CDS |
AAATTAGGAGGAAGAGGCGG+TGG | 0.411893 | 3:+98176837 | None:intergenic |
GACGCCGCCACCGCCTTTGC+CGG | 0.411999 | 3:-98176622 | MsG0380017588.01.T01:CDS |
TCTTCCAAAGGCGGTGGAGG+AGG | 0.417718 | 3:+98176873 | None:intergenic |
GAGAAATATCAAGAGATTTG+AGG | 0.419497 | 3:+98174712 | None:intergenic |
GAGAACTAAGAATCTGCATA+AGG | 0.420407 | 3:+98176289 | None:intergenic |
GAGGAAGAGGCGGTGGAGGA+GGG | 0.421531 | 3:+98176844 | None:intergenic |
CAAGCCATGTTCTTCGAATC+CGG | 0.423759 | 3:+98176603 | None:intergenic |
TGAGCTCTTCCGCGCGCTAT+CGG | 0.425047 | 3:-98174088 | MsG0380017588.01.T01:CDS |
GCTCGTAACGCCTTCGCCGC+CGG | 0.436376 | 3:-98177014 | MsG0380017588.01.T01:CDS |
CTAAGATGCTTGAAGCTACT+AGG | 0.436626 | 3:-98176221 | MsG0380017588.01.T01:CDS |
TATGTATCAAAGTGTATGTT+TGG | 0.444857 | 3:-98173663 | MsG0380017588.01.T01:three_prime_UTR |
ATCATCTCTTTCTAGATCAT+CGG | 0.445892 | 3:+98174254 | None:intergenic |
GGTACCATTCTTCAAAAGCT+TGG | 0.451334 | 3:+98174301 | None:intergenic |
TCTAATTTCGCCGATGGTCG+GGG | 0.454232 | 3:-98176186 | MsG0380017588.01.T01:intron |
ACAAACTGCTTCTCCGAGAC+CGG | 0.455691 | 3:+98174216 | None:intergenic |
TTGTTGAAGAGGTGGAAGAA+GGG | 0.456126 | 3:-98176716 | MsG0380017588.01.T01:CDS |
CTTTCAGGATGGCCAATATG+TGG | 0.463738 | 3:-98174782 | MsG0380017588.01.T01:intron |
TCCAAAGGCGGTGGAGGAGG+CGG | 0.464614 | 3:+98176876 | None:intergenic |
GTGAGGATGCAGCTTAACTT+AGG | 0.464738 | 3:+98173934 | None:intergenic |
TTCGAATCCGGCAAAGGCGG+TGG | 0.466283 | 3:+98176615 | None:intergenic |
GATAGCGCGCGGAAGAGCTC+AGG | 0.466453 | 3:+98174090 | None:intergenic |
AAGATCGGCGGTGGAATTAG+TGG | 0.472783 | 3:-98176750 | MsG0380017588.01.T01:CDS |
CGGATTCGAAGAACATGGCT+TGG | 0.473814 | 3:-98176602 | MsG0380017588.01.T01:CDS |
TCATCTCTTTCTAGATCATC+GGG | 0.475608 | 3:+98174255 | None:intergenic |
AAGAGGCGGTGGAGGAGGGA+GGG | 0.476979 | 3:+98176848 | None:intergenic |
CCCTACACAACACTATCTTA+AGG | 0.478827 | 3:+98173777 | None:intergenic |
CATTCAAGGGTGTATCCAAT+GGG | 0.479178 | 3:-98175885 | MsG0380017588.01.T01:CDS |
CGCCACCTTCTCCTCTATCT+GGG | 0.481797 | 3:-98176653 | MsG0380017588.01.T01:CDS |
ACATCCAAGCTCTTTATAGC+TGG | 0.481961 | 3:-98174578 | MsG0380017588.01.T01:CDS |
GATTCTTCCAAAGGCGGTGG+AGG | 0.482481 | 3:+98176870 | None:intergenic |
TAAAGAAGGGCTTGGATTGG+TGG | 0.484719 | 3:+98174483 | None:intergenic |
ACAGAGCGTTTGAGAGAAGC+AGG | 0.486078 | 3:+98176810 | None:intergenic |
GAAATGTGAGGAAACTAGAA+AGG | 0.486729 | 3:-98174340 | MsG0380017588.01.T01:CDS |
AAAACAAAATAATCTGTGTT+GGG | 0.487035 | 3:-98177273 | MsG0380017588.01.T01:five_prime_UTR |
CAAAACAAAATAATCTGTGT+TGG | 0.487391 | 3:-98177274 | MsG0380017588.01.T01:five_prime_UTR |
ATTGTTGAAGAGGTGGAAGA+AGG | 0.490175 | 3:-98176717 | MsG0380017588.01.T01:CDS |
GATGAGATTGAGAATGAAGA+AGG | 0.491897 | 3:-98176525 | MsG0380017588.01.T01:CDS |
ATTGCCCACGCTCAAGGTGG+TGG | 0.492952 | 3:-98174021 | MsG0380017588.01.T01:CDS |
TAAAGCTTCTGAGACTGCTC+AGG | 0.493736 | 3:-98176250 | MsG0380017588.01.T01:CDS |
TTTGGAATGTAATCCAAGAA+TGG | 0.494175 | 3:-98174641 | MsG0380017588.01.T01:CDS |
ATTGCTCTTCTAAACTCAGC+AGG | 0.495940 | 3:+98176333 | None:intergenic |
GGCGCCAGTGTTGAATCATT+AGG | 0.496446 | 3:-98175495 | MsG0380017588.01.T01:CDS |
GAGAATGAGAAGAAAAGAGA+AGG | 0.496594 | 3:+98177152 | None:intergenic |
TTGGAATGTAATCCAAGAAT+GGG | 0.497192 | 3:-98174640 | MsG0380017588.01.T01:CDS |
CAGTTACAGCACCGCAAGAT+CGG | 0.497409 | 3:-98176765 | MsG0380017588.01.T01:CDS |
GGGAAGAGGTTCTTTGAATG+AGG | 0.498151 | 3:-98176550 | MsG0380017588.01.T01:CDS |
GGATTCGAAGAACATGGCTT+GGG | 0.499143 | 3:-98176601 | MsG0380017588.01.T01:CDS |
AGAACTAAGAATCTGCATAA+GGG | 0.500689 | 3:+98176290 | None:intergenic |
GAATCCGGCAAAGGCGGTGG+CGG | 0.501551 | 3:+98176618 | None:intergenic |
CTTTATCACTGCAGCAAATG+AGG | 0.502909 | 3:+98174404 | None:intergenic |
AGAATGAGAAGAAAAGAGAA+GGG | 0.507845 | 3:+98177153 | None:intergenic |
TGCAAGTGATAACATGGAAT+CGG | 0.508476 | 3:-98175909 | MsG0380017588.01.T01:CDS |
TTTATGGATATGGATAATAT+GGG | 0.509779 | 3:-98176570 | MsG0380017588.01.T01:CDS |
AGAGGAGAAGGTGGCGCGTG+AGG | 0.514111 | 3:+98176660 | None:intergenic |
AATCATGCCATGCATAAAGA+AGG | 0.514400 | 3:+98174469 | None:intergenic |
AAATACAAACAATCCGGTCT+CGG | 0.515130 | 3:-98174229 | MsG0380017588.01.T01:CDS |
GGTGAGAAATTAGGAGGAAG+AGG | 0.515672 | 3:+98176831 | None:intergenic |
TGATGTAAATACAAACAATC+CGG | 0.517170 | 3:-98174235 | MsG0380017588.01.T01:CDS |
TCTTGTGTGTAAATGACTTA+CGG | 0.517302 | 3:+98175458 | None:intergenic |
AAAGACGATCATACTTCAGC+AGG | 0.518195 | 3:-98174385 | MsG0380017588.01.T01:CDS |
CAGCACCGCAAGATCGGCGG+TGG | 0.518911 | 3:-98176759 | MsG0380017588.01.T01:CDS |
CATGGCATAACCGGAATGAC+CGG | 0.520438 | 3:+98176995 | None:intergenic |
TGAGCCAGCTATAAAGAGCT+TGG | 0.525015 | 3:+98174574 | None:intergenic |
ACCGGAATGACCGGCGGCGA+AGG | 0.525985 | 3:+98177004 | None:intergenic |
CGGTCATTCCGGTTATGCCA+TGG | 0.529624 | 3:-98176994 | MsG0380017588.01.T01:CDS |
AGGCACATAATTGAACACTT+AGG | 0.530110 | 3:+98173797 | None:intergenic |
GTCACTTTACTCCCAGATAG+AGG | 0.530493 | 3:+98176642 | None:intergenic |
ACATCAACCTCAACTTTCTC+CGG | 0.530753 | 3:+98176435 | None:intergenic |
GTGCTTTCCATAATTAAGGA+TGG | 0.531625 | 3:+98173825 | None:intergenic |
TCATTCAAGGGTGTATCCAA+TGG | 0.533090 | 3:-98175886 | MsG0380017588.01.T01:CDS |
TATCATTCTAATTTCGCCGA+TGG | 0.533390 | 3:-98176192 | MsG0380017588.01.T01:CDS |
TCCAAGCCCTTCTTTATGCA+TGG | 0.533581 | 3:-98174476 | MsG0380017588.01.T01:CDS |
AAGTCGATTGCCCACGCTCA+AGG | 0.535916 | 3:-98174027 | MsG0380017588.01.T01:CDS |
AACATGGAATCGGTCATTCA+AGG | 0.539680 | 3:-98175899 | MsG0380017588.01.T01:CDS |
GGTGTATCCAATGGGGAGGG+TGG | 0.541152 | 3:-98175877 | MsG0380017588.01.T01:CDS |
GCCATGCATAAAGAAGGGCT+TGG | 0.543280 | 3:+98174475 | None:intergenic |
GATATGGATAATATGGGAAG+AGG | 0.547615 | 3:-98176564 | MsG0380017588.01.T01:CDS |
GGCGGTGGAATTAGTGGTGG+AGG | 0.549912 | 3:-98176744 | MsG0380017588.01.T01:CDS |
CCAGAAGCATTTACAACGAA+GGG | 0.551600 | 3:-98174280 | MsG0380017588.01.T01:CDS |
GAAGCAGGTGAGAAATTAGG+AGG | 0.551998 | 3:+98176825 | None:intergenic |
ATGAGAATGGTGACAAAGAG+AGG | 0.555734 | 3:+98177196 | None:intergenic |
TTTGGACAAGTTGTTAGCAT+GGG | 0.555933 | 3:-98175809 | MsG0380017588.01.T01:CDS |
GCATAAAGAAGGGCTTGGAT+TGG | 0.556125 | 3:+98174480 | None:intergenic |
TAATTCCACCGCCGATCTTG+CGG | 0.558644 | 3:+98176754 | None:intergenic |
TGCTGTAACTGCAACGACAC+AGG | 0.563887 | 3:+98176777 | None:intergenic |
ACATGGAATCGGTCATTCAA+GGG | 0.566506 | 3:-98175898 | MsG0380017588.01.T01:CDS |
AGGGATTCTTCCAAAGGCGG+TGG | 0.573076 | 3:+98176867 | None:intergenic |
AGTTTCGCCGTGAGCGTAGT+CGG | 0.573795 | 3:+98176944 | None:intergenic |
TTTCAGGATGGCCAATATGT+GGG | 0.579247 | 3:-98174781 | MsG0380017588.01.T01:intron |
GGTTAGAACCTACAAAGCTA+TGG | 0.579602 | 3:+98173846 | None:intergenic |
AAATACATTACCCCGACCAT+CGG | 0.580330 | 3:+98176176 | None:intergenic |
AATGAAGAAGGTGAAATTGA+AGG | 0.580423 | 3:-98176513 | MsG0380017588.01.T01:CDS |
TATTGTTGATATGCAGTCGA+TGG | 0.581443 | 3:-98175433 | MsG0380017588.01.T01:CDS |
TTCTTCGAATCCGGCAAAGG+CGG | 0.581499 | 3:+98176612 | None:intergenic |
GAAGAGGTGGAAGAAGGGAA+AGG | 0.581945 | 3:-98176711 | MsG0380017588.01.T01:CDS |
GTATGCTGCTTTCTTGTGTG+AGG | 0.582315 | 3:+98173917 | None:intergenic |
GGGAAAGGCGGTGATGCTGA+TGG | 0.584993 | 3:-98176696 | MsG0380017588.01.T01:CDS |
TGGAGGTGACATTGTTGAAG+AGG | 0.585814 | 3:-98176727 | MsG0380017588.01.T01:CDS |
GAAACTCTATGAAGAAGTCA+AGG | 0.586792 | 3:-98175782 | MsG0380017588.01.T01:intron |
CGCACCACCACCTTGAGCGT+GGG | 0.587071 | 3:+98174017 | None:intergenic |
GAGGTGGAAGAAGGGAAAGG+CGG | 0.588013 | 3:-98176708 | MsG0380017588.01.T01:CDS |
CCGCACCACCACCTTGAGCG+TGG | 0.589202 | 3:+98174016 | None:intergenic |
GTAGTCGGAGAGAGCGGCGC+CGG | 0.592343 | 3:+98176959 | None:intergenic |
GCCTTAAGATAGTGTTGTGT+AGG | 0.592871 | 3:-98173778 | MsG0380017588.01.T01:three_prime_UTR |
GAGTCATGCAAGTGATAACA+TGG | 0.593246 | 3:-98175915 | MsG0380017588.01.T01:CDS |
CAGAAGCATTTACAACGAAG+GGG | 0.593582 | 3:-98174279 | MsG0380017588.01.T01:CDS |
AGGTGACATTGTTGAAGAGG+TGG | 0.593877 | 3:-98176724 | MsG0380017588.01.T01:CDS |
GGTGCGGTCGTAATGATGCT+TGG | 0.594455 | 3:+98174671 | None:intergenic |
GGACTCAACAGTTTCTGAAG+TGG | 0.596338 | 3:-98175412 | MsG0380017588.01.T01:CDS |
TTACTCCCAGATAGAGGAGA+AGG | 0.597069 | 3:+98176648 | None:intergenic |
GAGAGGACAGAAGAGAGAGA+AGG | 0.602114 | 3:+98177213 | None:intergenic |
CCACGCTCAAGGTGGTGGTG+CGG | 0.602808 | 3:-98174016 | MsG0380017588.01.T01:CDS |
GGATCAGAATGAAGAGGCGG+TGG | 0.604173 | 3:+98176897 | None:intergenic |
ATGTTCTTCGAATCCGGCAA+AGG | 0.605600 | 3:+98176609 | None:intergenic |
ATCATGCCATGCATAAAGAA+GGG | 0.611365 | 3:+98174470 | None:intergenic |
GAAGTTAAAGGAGAAATGTG+AGG | 0.611782 | 3:-98174352 | MsG0380017588.01.T01:CDS |
AAACTAGAAAGGAATTCTTG+AGG | 0.618185 | 3:-98174329 | MsG0380017588.01.T01:CDS |
GAGAAATTAGGAGGAAGAGG+CGG | 0.619004 | 3:+98176834 | None:intergenic |
GGAGGGAGGGATTCTTCCAA+AGG | 0.620699 | 3:+98176861 | None:intergenic |
CAAGGGTGTATCCAATGGGG+AGG | 0.622313 | 3:-98175881 | MsG0380017588.01.T01:CDS |
GCTCTCTCCGACTACGCTCA+CGG | 0.622545 | 3:-98176951 | MsG0380017588.01.T01:CDS |
ATCTGCATAAGGGTAACAGA+AGG | 0.622988 | 3:+98176300 | None:intergenic |
ACCAGAAGCATTTACAACGA+AGG | 0.625698 | 3:-98174281 | MsG0380017588.01.T01:CDS |
CTGAACAAGCAGAAGAAGCG+TGG | 0.626103 | 3:-98175516 | MsG0380017588.01.T01:CDS |
CCTTAAGATAGTGTTGTGTA+GGG | 0.628462 | 3:-98173777 | MsG0380017588.01.T01:three_prime_UTR |
GACGATCATACTTCAGCAGG+AGG | 0.629306 | 3:-98174382 | MsG0380017588.01.T01:CDS |
ATCGGCGGTGGAATTAGTGG+TGG | 0.630858 | 3:-98176747 | MsG0380017588.01.T01:CDS |
ATTTGAGTGAAGAATGAGAA+TGG | 0.631267 | 3:+98177183 | None:intergenic |
TGAGATTGAACCCAAGACAC+CGG | 0.633573 | 3:-98176454 | MsG0380017588.01.T01:CDS |
GGAGCATGAACATGTACATG+AGG | 0.635866 | 3:-98176403 | MsG0380017588.01.T01:CDS |
GATTACATTCCAAAGCTGCA+CGG | 0.636378 | 3:+98174650 | None:intergenic |
CTCCCAGATAGAGGAGAAGG+TGG | 0.636470 | 3:+98176651 | None:intergenic |
CAAGACACCGGAGAAAGTTG+AGG | 0.641109 | 3:-98176442 | MsG0380017588.01.T01:CDS |
TTTGCCGGATTCGAAGAACA+TGG | 0.646207 | 3:-98176607 | MsG0380017588.01.T01:CDS |
TGAGGATGATGTGATAAGAG+AGG | 0.648109 | 3:-98176385 | MsG0380017588.01.T01:CDS |
GTGAGCGTAGTCGGAGAGAG+CGG | 0.649810 | 3:+98176953 | None:intergenic |
GGCATAACCGGAATGACCGG+CGG | 0.652370 | 3:+98176998 | None:intergenic |
TTACAGCACCGCAAGATCGG+CGG | 0.652795 | 3:-98176762 | MsG0380017588.01.T01:CDS |
GGCGGATCAGAATGAAGAGG+CGG | 0.657993 | 3:+98176894 | None:intergenic |
GAGAATGTTGATGTTAATGG+AGG | 0.660500 | 3:-98176489 | MsG0380017588.01.T01:CDS |
TGATGTTAATGGAGGACATG+TGG | 0.660982 | 3:-98176481 | MsG0380017588.01.T01:CDS |
AAGGGTGTATCCAATGGGGA+GGG | 0.663838 | 3:-98175880 | MsG0380017588.01.T01:CDS |
GGAGGCGGATCAGAATGAAG+AGG | 0.664266 | 3:+98176891 | None:intergenic |
TGTTAATGGAGGACATGTGG+AGG | 0.675457 | 3:-98176478 | MsG0380017588.01.T01:CDS |
CATTCCAAAGCTGCACGGTG+CGG | 0.678361 | 3:+98174655 | None:intergenic |
GGGAGGGATTCTTCCAAAGG+CGG | 0.689716 | 3:+98176864 | None:intergenic |
GTTTAGAAGAGCAATTAAGG+TGG | 0.690000 | 3:-98176325 | MsG0380017588.01.T01:CDS |
GAGTATAATCCGATAGCGCG+CGG | 0.690717 | 3:+98174079 | None:intergenic |
TGTAACTGCAACGACACAGG+CGG | 0.699824 | 3:+98176780 | None:intergenic |
AGAAGCATTTACAACGAAGG+GGG | 0.702303 | 3:-98174278 | MsG0380017588.01.T01:CDS |
TCGATTGCCCACGCTCAAGG+TGG | 0.713047 | 3:-98174024 | MsG0380017588.01.T01:CDS |
TAACAACTTGTCCAAAACAG+TGG | 0.715371 | 3:+98175816 | None:intergenic |
ATTCAAGGGTGTATCCAATG+GGG | 0.730624 | 3:-98175884 | MsG0380017588.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTGAAATTGAATAAAATAA+AGG | + | Chr3:98174800-98174819 | None:intergenic | 15.0% |
!! | TACAACATTAAAATAAACTT+CGG | + | Chr3:98175952-98175971 | None:intergenic | 15.0% |
!!! | CAATAAGTGAAATTTTAAAA+AGG | + | Chr3:98175346-98175365 | None:intergenic | 15.0% |
!! | AAAACAAAATAATCTGTGTT+GGG | - | Chr3:98173661-98173680 | MsG0380017588.01.T01:three_prime_UTR | 20.0% |
!! | TTTATGGATATGGATAATAT+GGG | - | Chr3:98174364-98174383 | MsG0380017588.01.T01:CDS | 20.0% |
!!! | ATAATAAAATGCTTTTCGAT+TGG | + | Chr3:98175871-98175890 | None:intergenic | 20.0% |
!!! | ATATTCTAGAAAATTGTAAG+TGG | - | Chr3:98175839-98175858 | MsG0380017588.01.T01:CDS | 20.0% |
!!! | CAACTAGAGTTTTAAAAAAA+AGG | + | Chr3:98174905-98174924 | None:intergenic | 20.0% |
!!! | GAAAGTATAAATGTCAAAAA+TGG | + | Chr3:98175191-98175210 | None:intergenic | 20.0% |
!!! | TAATAAAATGCTTTTCGATT+GGG | + | Chr3:98175870-98175889 | None:intergenic | 20.0% |
!!! | TAGAATATATTTTGCAACAT+CGG | + | Chr3:98175827-98175846 | None:intergenic | 20.0% |
! | AAATGTGCTTTCCATAATTA+AGG | + | Chr3:98177116-98177135 | None:intergenic | 25.0% |
! | ATCATTAGGAAAAACTAAAG+CGG | - | Chr3:98175453-98175472 | MsG0380017588.01.T01:CDS | 25.0% |
! | CTTTATGGATATGGATAATA+TGG | - | Chr3:98174363-98174382 | MsG0380017588.01.T01:CDS | 25.0% |
! | TAAAATAAACTTCGGTATCT+AGG | + | Chr3:98175944-98175963 | None:intergenic | 25.0% |
! | TATGTATCAAAGTGTATGTT+TGG | - | Chr3:98177271-98177290 | MsG0380017588.01.T01:five_prime_UTR | 25.0% |
! | TGATATTTCTCAAGATCATA+AGG | - | Chr3:98176234-98176253 | MsG0380017588.01.T01:CDS | 25.0% |
! | TGATGCAAAAAATAGAAACT+TGG | + | Chr3:98176086-98176105 | None:intergenic | 25.0% |
! | TGATGTAAATACAAACAATC+CGG | - | Chr3:98176699-98176718 | MsG0380017588.01.T01:CDS | 25.0% |
!! | GGATTATTTCTTTATGGATA+TGG | - | Chr3:98174354-98174373 | MsG0380017588.01.T01:CDS | 25.0% |
!! | TCCATTTTCTAACTCAAAAT+GGG | - | Chr3:98173815-98173834 | MsG0380017588.01.T01:three_prime_UTR | 25.0% |
!!! | AAATTTTACCATAGCTTTGT+AGG | - | Chr3:98177080-98177099 | MsG0380017588.01.T01:CDS | 25.0% |
!!! | GAGTTTTAAAAAAAAGGTCT+AGG | + | Chr3:98174899-98174918 | None:intergenic | 25.0% |
!!! | TCTATTTTTTGCATCACAAA+TGG | - | Chr3:98176090-98176109 | MsG0380017588.01.T01:intron | 25.0% |
!!! | TTTTCAATTTGTTCTGGTAT+TGG | - | Chr3:98176018-98176037 | MsG0380017588.01.T01:intron | 25.0% |
AAACTAGAAAGGAATTCTTG+AGG | - | Chr3:98176605-98176624 | MsG0380017588.01.T01:CDS | 30.0% | |
AAAGCTAACTAACAAGATGA+AGG | + | Chr3:98175213-98175232 | None:intergenic | 30.0% | |
AATGAAGAAGGTGAAATTGA+AGG | - | Chr3:98174421-98174440 | MsG0380017588.01.T01:CDS | 30.0% | |
ACCAGAACAAATTGAAAACT+AGG | + | Chr3:98176016-98176035 | None:intergenic | 30.0% | |
AGAACTAAGAATCTGCATAA+GGG | + | Chr3:98174647-98174666 | None:intergenic | 30.0% | |
AGAATGAGAAGAAAAGAGAA+GGG | + | Chr3:98173784-98173803 | None:intergenic | 30.0% | |
ATAGAAACTTGGTACTTGAT+TGG | + | Chr3:98176075-98176094 | None:intergenic | 30.0% | |
ATCATCTCTTTCTAGATCAT+CGG | + | Chr3:98176683-98176702 | None:intergenic | 30.0% | |
ATTTGAGTGAAGAATGAGAA+TGG | + | Chr3:98173754-98173773 | None:intergenic | 30.0% | |
CAAATATAGATTGAGAATCC+AGG | + | Chr3:98175905-98175924 | None:intergenic | 30.0% | |
CAATTTGGATAATGACATCA+AGG | + | Chr3:98174872-98174891 | None:intergenic | 30.0% | |
CTAAGATATCAAATAAGCAC+AGG | + | Chr3:98175643-98175662 | None:intergenic | 30.0% | |
GAATCTACTTGATTTCTTTC+AGG | - | Chr3:98176137-98176156 | MsG0380017588.01.T01:intron | 30.0% | |
GAGAAATATCAAGAGATTTG+AGG | + | Chr3:98176225-98176244 | None:intergenic | 30.0% | |
GTGCTTATTTGATATCTTAG+TGG | - | Chr3:98175643-98175662 | MsG0380017588.01.T01:intron | 30.0% | |
GTTCTAACCATCCTTAATTA+TGG | - | Chr3:98177102-98177121 | MsG0380017588.01.T01:CDS | 30.0% | |
TCAAGTAGATTCATGAATCA+TGG | + | Chr3:98176129-98176148 | None:intergenic | 30.0% | |
TCTTGTGTGTAAATGACTTA+CGG | + | Chr3:98175479-98175498 | None:intergenic | 30.0% | |
TGAGTTTAGAAGAGCAATTA+AGG | - | Chr3:98174606-98174625 | MsG0380017588.01.T01:CDS | 30.0% | |
TTATTATGCAGTTTAGTACC+TGG | - | Chr3:98175884-98175903 | MsG0380017588.01.T01:CDS | 30.0% | |
TTGGAATGTAATCCAAGAAT+GGG | - | Chr3:98176294-98176313 | MsG0380017588.01.T01:CDS | 30.0% | |
! | ATAACAAGAGCAACAAGTTT+TGG | + | Chr3:98175574-98175593 | None:intergenic | 30.0% |
! | CTCCATTTTCTAACTCAAAA+TGG | - | Chr3:98173814-98173833 | MsG0380017588.01.T01:three_prime_UTR | 30.0% |
! | TTGGTGTGTTAGCAAAATTT+TGG | + | Chr3:98176056-98176075 | None:intergenic | 30.0% |
! | TTGGTTAAAGGAAGTTTTCA+AGG | + | Chr3:98175728-98175747 | None:intergenic | 30.0% |
! | TTTGGAATGTAATCCAAGAA+TGG | - | Chr3:98176293-98176312 | MsG0380017588.01.T01:CDS | 30.0% |
! | TTTTCCTAATGATTCAACAC+TGG | + | Chr3:98175446-98175465 | None:intergenic | 30.0% |
!! | AAAACCAAGCTTTTGAAGAA+TGG | - | Chr3:98176629-98176648 | MsG0380017588.01.T01:CDS | 30.0% |
!! | AAACTTGTTGCTCTTGTTAT+TGG | - | Chr3:98175574-98175593 | MsG0380017588.01.T01:intron | 30.0% |
!! | AACTTGTTGCTCTTGTTATT+GGG | - | Chr3:98175575-98175594 | MsG0380017588.01.T01:intron | 30.0% |
!! | TAACTTGTTGCTCTTAATGA+GGG | - | Chr3:98175316-98175335 | MsG0380017588.01.T01:intron | 30.0% |
!! | TCCTAGTTTTCAATTTGTTC+TGG | - | Chr3:98176012-98176031 | MsG0380017588.01.T01:intron | 30.0% |
!! | TGAGGTTGATGTGTATAATA+AGG | - | Chr3:98174510-98174529 | MsG0380017588.01.T01:CDS | 30.0% |
!!! | ACCCATTTTGAGTTAGAAAA+TGG | + | Chr3:98173819-98173838 | None:intergenic | 30.0% |
!!! | GAGACGAGATTTTTTCTTTT+AGG | + | Chr3:98176414-98176433 | None:intergenic | 30.0% |
!!! | GTTTAAGGTTTTTAGTTAGC+TGG | - | Chr3:98174931-98174950 | MsG0380017588.01.T01:intron | 30.0% |
AAATACAAACAATCCGGTCT+CGG | - | Chr3:98176705-98176724 | MsG0380017588.01.T01:CDS | 35.0% | |
AAGGATGAACTGCAAAAATG+AGG | + | Chr3:98173705-98173724 | None:intergenic | 35.0% | |
AATCATGCCATGCATAAAGA+AGG | + | Chr3:98176468-98176487 | None:intergenic | 35.0% | |
AGGCACATAATTGAACACTT+AGG | + | Chr3:98177140-98177159 | None:intergenic | 35.0% | |
ATCATGCCATGCATAAAGAA+GGG | + | Chr3:98176467-98176486 | None:intergenic | 35.0% | |
CCTTAAGATAGTGTTGTGTA+GGG | - | Chr3:98177157-98177176 | MsG0380017588.01.T01:five_prime_UTR | 35.0% | |
CTACTTGATTTCTTTCAGGA+TGG | - | Chr3:98176141-98176160 | MsG0380017588.01.T01:intron | 35.0% | |
CTCACATTCAAGACTAATTC+AGG | + | Chr3:98175781-98175800 | None:intergenic | 35.0% | |
CTCTAGTTGTGTGAAGTTTA+AGG | - | Chr3:98174916-98174935 | MsG0380017588.01.T01:intron | 35.0% | |
GAAACTCTATGAAGAAGTCA+AGG | - | Chr3:98175152-98175171 | MsG0380017588.01.T01:intron | 35.0% | |
GAAATGTGAGGAAACTAGAA+AGG | - | Chr3:98176594-98176613 | MsG0380017588.01.T01:CDS | 35.0% | |
GAACATATTCTCCCACATAT+TGG | + | Chr3:98176167-98176186 | None:intergenic | 35.0% | |
GAAGTTAAAGGAGAAATGTG+AGG | - | Chr3:98176582-98176601 | MsG0380017588.01.T01:CDS | 35.0% | |
GAGAACTAAGAATCTGCATA+AGG | + | Chr3:98174648-98174667 | None:intergenic | 35.0% | |
GAGAATGAGAAGAAAAGAGA+AGG | + | Chr3:98173785-98173804 | None:intergenic | 35.0% | |
GAGAATGTTGATGTTAATGG+AGG | - | Chr3:98174445-98174464 | MsG0380017588.01.T01:CDS | 35.0% | |
GATATGGATAATATGGGAAG+AGG | - | Chr3:98174370-98174389 | MsG0380017588.01.T01:CDS | 35.0% | |
GATGAGATTGAGAATGAAGA+AGG | - | Chr3:98174409-98174428 | MsG0380017588.01.T01:CDS | 35.0% | |
GGTGAGAATGTTGATGTTAA+TGG | - | Chr3:98174442-98174461 | MsG0380017588.01.T01:CDS | 35.0% | |
GTCCTAAATTTCATGCTTGT+TGG | - | Chr3:98175755-98175774 | MsG0380017588.01.T01:intron | 35.0% | |
GTGCTTTCCATAATTAAGGA+TGG | + | Chr3:98177112-98177131 | None:intergenic | 35.0% | |
GTTTAGAAGAGCAATTAAGG+TGG | - | Chr3:98174609-98174628 | MsG0380017588.01.T01:CDS | 35.0% | |
TAACAACTTGTCCAAAACAG+TGG | + | Chr3:98175121-98175140 | None:intergenic | 35.0% | |
TAGAAAACACGACAGTACAA+TGG | + | Chr3:98175263-98175282 | None:intergenic | 35.0% | |
TATCATTCTAATTTCGCCGA+TGG | - | Chr3:98174742-98174761 | MsG0380017588.01.T01:CDS | 35.0% | |
TATTGTTGATATGCAGTCGA+TGG | - | Chr3:98175501-98175520 | MsG0380017588.01.T01:CDS | 35.0% | |
TCATCTCTTTCTAGATCATC+GGG | + | Chr3:98176682-98176701 | None:intergenic | 35.0% | |
TGCAAGTGATAACATGGAAT+CGG | - | Chr3:98175025-98175044 | MsG0380017588.01.T01:intron | 35.0% | |
TGTAAAGTGACGCGATTATT+AGG | + | Chr3:98175983-98176002 | None:intergenic | 35.0% | |
TTAGCTGGAATTGACATGTA+AGG | - | Chr3:98174946-98174965 | MsG0380017588.01.T01:intron | 35.0% | |
TTTGGACAAGTTGTTAGCAT+GGG | - | Chr3:98175125-98175144 | MsG0380017588.01.T01:intron | 35.0% | |
! | ATATCTCTTTGACTTCCCAT+TGG | + | Chr3:98175610-98175629 | None:intergenic | 35.0% |
! | ATTGGGTAAGTATTGCCAAT+GGG | - | Chr3:98175592-98175611 | MsG0380017588.01.T01:intron | 35.0% |
! | CTTCACGCATTAAGTTTTTG+CGG | + | Chr3:98173892-98173911 | None:intergenic | 35.0% |
! | GAAATTTAGGACGTTGTCAT+TGG | + | Chr3:98175747-98175766 | None:intergenic | 35.0% |
! | GGCTTGGGATTATTTCTTTA+TGG | - | Chr3:98174348-98174367 | MsG0380017588.01.T01:CDS | 35.0% |
! | TATTGGGTAAGTATTGCCAA+TGG | - | Chr3:98175591-98175610 | MsG0380017588.01.T01:intron | 35.0% |
! | TGATTTGCAATGACATTAGC+AGG | - | Chr3:98174976-98174995 | MsG0380017588.01.T01:intron | 35.0% |
! | TTTTGGACAAGTTGTTAGCA+TGG | - | Chr3:98175124-98175143 | MsG0380017588.01.T01:intron | 35.0% |
!! | GTAACTTGTTGCTCTTAATG+AGG | - | Chr3:98175315-98175334 | MsG0380017588.01.T01:intron | 35.0% |
!! | GTTTTCAAGGAAGTTCACAA+CGG | + | Chr3:98175715-98175734 | None:intergenic | 35.0% |
!!! | GTGACCAAAGTTTTAAATCG+CGG | - | Chr3:98174834-98174853 | MsG0380017588.01.T01:intron | 35.0% |
!!! | TCTTTTAGGTTGCTTTCGAT+GGG | + | Chr3:98176400-98176419 | None:intergenic | 35.0% |
!!! | TGACCAAAGTTTTAAATCGC+GGG | - | Chr3:98174835-98174854 | MsG0380017588.01.T01:intron | 35.0% |
!!! | TTCTTTTAGGTTGCTTTCGA+TGG | + | Chr3:98176401-98176420 | None:intergenic | 35.0% |
AAAGACGATCATACTTCAGC+AGG | - | Chr3:98176549-98176568 | MsG0380017588.01.T01:CDS | 40.0% | |
AAATACATTACCCCGACCAT+CGG | + | Chr3:98174761-98174780 | None:intergenic | 40.0% | |
AACATGGAATCGGTCATTCA+AGG | - | Chr3:98175035-98175054 | MsG0380017588.01.T01:intron | 40.0% | |
ACAACTGAGAATCGCGAATA+TGG | + | Chr3:98175549-98175568 | None:intergenic | 40.0% | |
ACATCAACCTCAACTTTCTC+CGG | + | Chr3:98174502-98174521 | None:intergenic | 40.0% | |
ACATCCAAGCTCTTTATAGC+TGG | - | Chr3:98176356-98176375 | MsG0380017588.01.T01:CDS | 40.0% | |
ACATGGAATCGGTCATTCAA+GGG | - | Chr3:98175036-98175055 | MsG0380017588.01.T01:intron | 40.0% | |
AGAGAAGCAGGTGAGAAATT+AGG | + | Chr3:98174115-98174134 | None:intergenic | 40.0% | |
ATCTGCATAAGGGTAACAGA+AGG | + | Chr3:98174637-98174656 | None:intergenic | 40.0% | |
ATGAGAATGGTGACAAAGAG+AGG | + | Chr3:98173741-98173760 | None:intergenic | 40.0% | |
ATTCTAATTTCGCCGATGGT+CGG | - | Chr3:98174746-98174765 | MsG0380017588.01.T01:CDS | 40.0% | |
ATTGCTCTTCTAAACTCAGC+AGG | + | Chr3:98174604-98174623 | None:intergenic | 40.0% | |
ATTGTTGAAGAGGTGGAAGA+AGG | - | Chr3:98174217-98174236 | MsG0380017588.01.T01:CDS | 40.0% | |
CAAATTGTGACTCCCATTCT+TGG | + | Chr3:98176309-98176328 | None:intergenic | 40.0% | |
CCCTACACAACACTATCTTA+AGG | + | Chr3:98177160-98177179 | None:intergenic | 40.0% | |
CTAAGATGCTTGAAGCTACT+AGG | - | Chr3:98174713-98174732 | MsG0380017588.01.T01:CDS | 40.0% | |
CTTTATCACTGCAGCAAATG+AGG | + | Chr3:98176533-98176552 | None:intergenic | 40.0% | |
GAGTCATGCAAGTGATAACA+TGG | - | Chr3:98175019-98175038 | MsG0380017588.01.T01:intron | 40.0% | |
GATTACATTCCAAAGCTGCA+CGG | + | Chr3:98176287-98176306 | None:intergenic | 40.0% | |
GCCTTAAGATAGTGTTGTGT+AGG | - | Chr3:98177156-98177175 | MsG0380017588.01.T01:five_prime_UTR | 40.0% | |
GGAATTGACATGTAAGGTTG+AGG | - | Chr3:98174952-98174971 | MsG0380017588.01.T01:intron | 40.0% | |
GGAGGAAGAGATGAAGTTAA+AGG | - | Chr3:98176570-98176589 | MsG0380017588.01.T01:CDS | 40.0% | |
GGCCAACAAGCATGAAATTT+AGG | + | Chr3:98175760-98175779 | None:intergenic | 40.0% | |
GGTACCATTCTTCAAAAGCT+TGG | + | Chr3:98176636-98176655 | None:intergenic | 40.0% | |
GGTTAGAACCTACAAAGCTA+TGG | + | Chr3:98177091-98177110 | None:intergenic | 40.0% | |
TGAGGATGATGTGATAAGAG+AGG | - | Chr3:98174549-98174568 | MsG0380017588.01.T01:CDS | 40.0% | |
TGATGTTAATGGAGGACATG+TGG | - | Chr3:98174453-98174472 | MsG0380017588.01.T01:CDS | 40.0% | |
TTCACTTATTGTCGACAGCA+AGG | - | Chr3:98175355-98175374 | MsG0380017588.01.T01:intron | 40.0% | |
TTGTTGAAGAGGTGGAAGAA+GGG | - | Chr3:98174218-98174237 | MsG0380017588.01.T01:CDS | 40.0% | |
TTTCAGGATGGCCAATATGT+GGG | - | Chr3:98176153-98176172 | MsG0380017588.01.T01:intron | 40.0% | |
! | AAAGGTCTAGGACTGCAATT+TGG | + | Chr3:98174887-98174906 | None:intergenic | 40.0% |
! | AGAAACACATGCCACTGTTT+TGG | - | Chr3:98175107-98175126 | MsG0380017588.01.T01:intron | 40.0% |
! | AGGACGTTGTCATTGGTTAA+AGG | + | Chr3:98175740-98175759 | None:intergenic | 40.0% |
! | ATTCAAGGGTGTATCCAATG+GGG | - | Chr3:98175050-98175069 | MsG0380017588.01.T01:intron | 40.0% |
! | CATTCAAGGGTGTATCCAAT+GGG | - | Chr3:98175049-98175068 | MsG0380017588.01.T01:intron | 40.0% |
! | GGTCTGTAACTATTTTCAGC+TGG | + | Chr3:98176204-98176223 | None:intergenic | 40.0% |
! | TCATTCAAGGGTGTATCCAA+TGG | - | Chr3:98175048-98175067 | MsG0380017588.01.T01:intron | 40.0% |
! | TTGCAACATCGGTTACTACT+AGG | + | Chr3:98175816-98175835 | None:intergenic | 40.0% |
!! | ACCAGAAGCATTTACAACGA+AGG | - | Chr3:98176653-98176672 | MsG0380017588.01.T01:CDS | 40.0% |
!! | AGAAGCATTTACAACGAAGG+GGG | - | Chr3:98176656-98176675 | MsG0380017588.01.T01:CDS | 40.0% |
!! | CAGAAGCATTTACAACGAAG+GGG | - | Chr3:98176655-98176674 | MsG0380017588.01.T01:CDS | 40.0% |
!! | CCAGAAGCATTTACAACGAA+GGG | - | Chr3:98176654-98176673 | MsG0380017588.01.T01:CDS | 40.0% |
AGGTGACATTGTTGAAGAGG+TGG | - | Chr3:98174210-98174229 | MsG0380017588.01.T01:CDS | 45.0% | |
ATCGGTTACTACTAGGATGC+TGG | + | Chr3:98175809-98175828 | None:intergenic | 45.0% | |
ATGTTCTTCGAATCCGGCAA+AGG | + | Chr3:98174328-98174347 | None:intergenic | 45.0% | |
CAAGCCATGTTCTTCGAATC+CGG | + | Chr3:98174334-98174353 | None:intergenic | 45.0% | |
CCCTTCGTTGTAAATGCTTC+TGG | + | Chr3:98176657-98176676 | None:intergenic | 45.0% | |
CTTTCAGGATGGCCAATATG+TGG | - | Chr3:98176152-98176171 | MsG0380017588.01.T01:intron | 45.0% | |
GAAGCAGGTGAGAAATTAGG+AGG | + | Chr3:98174112-98174131 | None:intergenic | 45.0% | |
GAGAAATTAGGAGGAAGAGG+CGG | + | Chr3:98174103-98174122 | None:intergenic | 45.0% | |
GCATAAAGAAGGGCTTGGAT+TGG | + | Chr3:98176457-98176476 | None:intergenic | 45.0% | |
GGAGCATGAACATGTACATG+AGG | - | Chr3:98174531-98174550 | MsG0380017588.01.T01:CDS | 45.0% | |
GGATTCGAAGAACATGGCTT+GGG | - | Chr3:98174333-98174352 | MsG0380017588.01.T01:CDS | 45.0% | |
GGGAAGAGGTTCTTTGAATG+AGG | - | Chr3:98174384-98174403 | MsG0380017588.01.T01:CDS | 45.0% | |
GGTGAGAAATTAGGAGGAAG+AGG | + | Chr3:98174106-98174125 | None:intergenic | 45.0% | |
GTGAGGATGCAGCTTAACTT+AGG | + | Chr3:98177003-98177022 | None:intergenic | 45.0% | |
TCAACTTTCTCCGGTGTCTT+GGG | + | Chr3:98174493-98174512 | None:intergenic | 45.0% | |
TCCAAGCCCTTCTTTATGCA+TGG | - | Chr3:98176458-98176477 | MsG0380017588.01.T01:CDS | 45.0% | |
TGAGATTGAACCCAAGACAC+CGG | - | Chr3:98174480-98174499 | MsG0380017588.01.T01:CDS | 45.0% | |
TGAGCCAGCTATAAAGAGCT+TGG | + | Chr3:98176363-98176382 | None:intergenic | 45.0% | |
TGGAGGTGACATTGTTGAAG+AGG | - | Chr3:98174207-98174226 | MsG0380017588.01.T01:CDS | 45.0% | |
TGTTAATGGAGGACATGTGG+AGG | - | Chr3:98174456-98174475 | MsG0380017588.01.T01:CDS | 45.0% | |
TTACTCCCAGATAGAGGAGA+AGG | + | Chr3:98174289-98174308 | None:intergenic | 45.0% | |
TTCTAATTTCGCCGATGGTC+GGG | - | Chr3:98174747-98174766 | MsG0380017588.01.T01:CDS | 45.0% | |
TTTGAGAGCCATGGCATAAC+CGG | + | Chr3:98173951-98173970 | None:intergenic | 45.0% | |
TTTGCCGGATTCGAAGAACA+TGG | - | Chr3:98174327-98174346 | MsG0380017588.01.T01:CDS | 45.0% | |
! | GGACTCAACAGTTTCTGAAG+TGG | - | Chr3:98175522-98175541 | MsG0380017588.01.T01:CDS | 45.0% |
! | GTCACTTTACTCCCAGATAG+AGG | + | Chr3:98174295-98174314 | None:intergenic | 45.0% |
! | GTGCCCGCGATTTAAAACTT+TGG | + | Chr3:98174841-98174860 | None:intergenic | 45.0% |
! | TAAAGAAGGGCTTGGATTGG+TGG | + | Chr3:98176454-98176473 | None:intergenic | 45.0% |
!! | GTATGCTGCTTTCTTGTGTG+AGG | + | Chr3:98177020-98177039 | None:intergenic | 45.0% |
!! | TAAAGCTTCTGAGACTGCTC+AGG | - | Chr3:98174684-98174703 | MsG0380017588.01.T01:CDS | 45.0% |
!!! | ATTGGTGGATTTTGGGCTCT+TGG | + | Chr3:98176439-98176458 | None:intergenic | 45.0% |
!!! | GGCTTGGATTGGTGGATTTT+GGG | + | Chr3:98176446-98176465 | None:intergenic | 45.0% |
AAATTAGGAGGAAGAGGCGG+TGG | + | Chr3:98174100-98174119 | None:intergenic | 50.0% | |
AAGATCGGCGGTGGAATTAG+TGG | - | Chr3:98174184-98174203 | MsG0380017588.01.T01:CDS | 50.0% | |
ACAAACTGCTTCTCCGAGAC+CGG | + | Chr3:98176721-98176740 | None:intergenic | 50.0% | |
CAAGACACCGGAGAAAGTTG+AGG | - | Chr3:98174492-98174511 | MsG0380017588.01.T01:CDS | 50.0% | |
CAGTTACAGCACCGCAAGAT+CGG | - | Chr3:98174169-98174188 | MsG0380017588.01.T01:CDS | 50.0% | |
CATGGCATAACCGGAATGAC+CGG | + | Chr3:98173942-98173961 | None:intergenic | 50.0% | |
CGGATTCGAAGAACATGGCT+TGG | - | Chr3:98174332-98174351 | MsG0380017588.01.T01:CDS | 50.0% | |
CTCAACTTTCTCCGGTGTCT+TGG | + | Chr3:98174494-98174513 | None:intergenic | 50.0% | |
CTGAACAAGCAGAAGAAGCG+TGG | - | Chr3:98175418-98175437 | MsG0380017588.01.T01:CDS | 50.0% | |
GAAGAGGTGGAAGAAGGGAA+AGG | - | Chr3:98174223-98174242 | MsG0380017588.01.T01:CDS | 50.0% | |
GACGATCATACTTCAGCAGG+AGG | - | Chr3:98176552-98176571 | MsG0380017588.01.T01:CDS | 50.0% | |
GAGAGGACAGAAGAGAGAGA+AGG | + | Chr3:98173724-98173743 | None:intergenic | 50.0% | |
GAGTATAATCCGATAGCGCG+CGG | + | Chr3:98176858-98176877 | None:intergenic | 50.0% | |
GCCATGCATAAAGAAGGGCT+TGG | + | Chr3:98176462-98176481 | None:intergenic | 50.0% | |
GCCATGGCTCTCAAAAACAC+CGG | - | Chr3:98173956-98173975 | MsG0380017588.01.T01:three_prime_UTR | 50.0% | |
TAATTCCACCGCCGATCTTG+CGG | + | Chr3:98174183-98174202 | None:intergenic | 50.0% | |
TCTAATTTCGCCGATGGTCG+GGG | - | Chr3:98174748-98174767 | MsG0380017588.01.T01:CDS | 50.0% | |
TGCTGTAACTGCAACGACAC+AGG | + | Chr3:98174160-98174179 | None:intergenic | 50.0% | |
TGTAACTGCAACGACACAGG+CGG | + | Chr3:98174157-98174176 | None:intergenic | 50.0% | |
TTCTTCGAATCCGGCAAAGG+CGG | + | Chr3:98174325-98174344 | None:intergenic | 50.0% | |
! | AAGGGTGTATCCAATGGGGA+GGG | - | Chr3:98175054-98175073 | MsG0380017588.01.T01:intron | 50.0% |
! | ACAGAGCGTTTGAGAGAAGC+AGG | + | Chr3:98174127-98174146 | None:intergenic | 50.0% |
! | ATCTTTTCCACCCTCCCCAT+TGG | + | Chr3:98175067-98175086 | None:intergenic | 50.0% |
! | GGCGCCAGTGTTGAATCATT+AGG | - | Chr3:98175439-98175458 | MsG0380017588.01.T01:CDS | 50.0% |
!!! | GCAAGCGAGTTTTGAGACTC+TGG | + | Chr3:98176825-98176844 | None:intergenic | 50.0% |
!!! | GGGCTTGGATTGGTGGATTT+TGG | + | Chr3:98176447-98176466 | None:intergenic | 50.0% |
AAGTCGATTGCCCACGCTCA+AGG | - | Chr3:98176907-98176926 | MsG0380017588.01.T01:CDS | 55.0% | |
AGGGATTCTTCCAAAGGCGG+TGG | + | Chr3:98174070-98174089 | None:intergenic | 55.0% | |
AGTTTCGCCGTGAGCGTAGT+CGG | + | Chr3:98173993-98174012 | None:intergenic | 55.0% | |
ATCGGCGGTGGAATTAGTGG+TGG | - | Chr3:98174187-98174206 | MsG0380017588.01.T01:CDS | 55.0% | |
CATTCCAAAGCTGCACGGTG+CGG | + | Chr3:98176282-98176301 | None:intergenic | 55.0% | |
CGCCACCTTCTCCTCTATCT+GGG | - | Chr3:98174281-98174300 | MsG0380017588.01.T01:CDS | 55.0% | |
CGGTCATTCCGGTTATGCCA+TGG | - | Chr3:98173940-98173959 | MsG0380017588.01.T01:three_prime_UTR | 55.0% | |
CTCCCAGATAGAGGAGAAGG+TGG | + | Chr3:98174286-98174305 | None:intergenic | 55.0% | |
GAGGTGGAAGAAGGGAAAGG+CGG | - | Chr3:98174226-98174245 | MsG0380017588.01.T01:CDS | 55.0% | |
GATTCTTCCAAAGGCGGTGG+AGG | + | Chr3:98174067-98174086 | None:intergenic | 55.0% | |
GCAGATTTCGCTAGCTCGTC+AGG | + | Chr3:98176505-98176524 | None:intergenic | 55.0% | |
GGAGGCGGATCAGAATGAAG+AGG | + | Chr3:98174046-98174065 | None:intergenic | 55.0% | |
GGAGGGAGGGATTCTTCCAA+AGG | + | Chr3:98174076-98174095 | None:intergenic | 55.0% | |
GGATCAGAATGAAGAGGCGG+TGG | + | Chr3:98174040-98174059 | None:intergenic | 55.0% | |
GGCGGATCAGAATGAAGAGG+CGG | + | Chr3:98174043-98174062 | None:intergenic | 55.0% | |
GGGAGGGATTCTTCCAAAGG+CGG | + | Chr3:98174073-98174092 | None:intergenic | 55.0% | |
GGTGCGGTCGTAATGATGCT+TGG | + | Chr3:98176266-98176285 | None:intergenic | 55.0% | |
TTACAGCACCGCAAGATCGG+CGG | - | Chr3:98174172-98174191 | MsG0380017588.01.T01:CDS | 55.0% | |
! | CAAGGGTGTATCCAATGGGG+AGG | - | Chr3:98175053-98175072 | MsG0380017588.01.T01:intron | 55.0% |
!! | GCCGGTGTTTTTGAGAGCCA+TGG | + | Chr3:98173960-98173979 | None:intergenic | 55.0% |
!! | GGTGGATTTTGGGCTCTTGG+CGG | + | Chr3:98176436-98176455 | None:intergenic | 55.0% |
ATTGCCCACGCTCAAGGTGG+TGG | - | Chr3:98176913-98176932 | MsG0380017588.01.T01:CDS | 60.0% | |
GCGCCACCTTCTCCTCTATC+TGG | - | Chr3:98174280-98174299 | MsG0380017588.01.T01:CDS | 60.0% | |
GCTCTCTCCGACTACGCTCA+CGG | - | Chr3:98173983-98174002 | MsG0380017588.01.T01:three_prime_UTR | 60.0% | |
GGCATAACCGGAATGACCGG+CGG | + | Chr3:98173939-98173958 | None:intergenic | 60.0% | |
GGCGGTGGAATTAGTGGTGG+AGG | - | Chr3:98174190-98174209 | MsG0380017588.01.T01:CDS | 60.0% | |
GGGAAAGGCGGTGATGCTGA+TGG | - | Chr3:98174238-98174257 | MsG0380017588.01.T01:CDS | 60.0% | |
GGTGTATCCAATGGGGAGGG+TGG | - | Chr3:98175057-98175076 | MsG0380017588.01.T01:intron | 60.0% | |
GTGAGCGTAGTCGGAGAGAG+CGG | + | Chr3:98173984-98174003 | None:intergenic | 60.0% | |
TCGATTGCCCACGCTCAAGG+TGG | - | Chr3:98176910-98176929 | MsG0380017588.01.T01:CDS | 60.0% | |
TCTTCCAAAGGCGGTGGAGG+AGG | + | Chr3:98174064-98174083 | None:intergenic | 60.0% | |
TGAGCTCTTCCGCGCGCTAT+CGG | - | Chr3:98176846-98176865 | MsG0380017588.01.T01:CDS | 60.0% | |
TTAGGAGGAAGAGGCGGTGG+AGG | + | Chr3:98174097-98174116 | None:intergenic | 60.0% | |
TTCGAATCCGGCAAAGGCGG+TGG | + | Chr3:98174322-98174341 | None:intergenic | 60.0% | |
AAGAGGCGGTGGAGGAGGGA+GGG | + | Chr3:98174089-98174108 | None:intergenic | 65.0% | |
ACGACCGCACCGTGCAGCTT+TGG | - | Chr3:98176275-98176294 | MsG0380017588.01.T01:CDS | 65.0% | |
AGAGGAGAAGGTGGCGCGTG+AGG | + | Chr3:98174277-98174296 | None:intergenic | 65.0% | |
CGCACCACCACCTTGAGCGT+GGG | + | Chr3:98176920-98176939 | None:intergenic | 65.0% | |
GAATCCGGCAAAGGCGGTGG+CGG | + | Chr3:98174319-98174338 | None:intergenic | 65.0% | |
GAGGAAGAGGCGGTGGAGGA+GGG | + | Chr3:98174093-98174112 | None:intergenic | 65.0% | |
GATAGCGCGCGGAAGAGCTC+AGG | + | Chr3:98176847-98176866 | None:intergenic | 65.0% | |
TCCAAAGGCGGTGGAGGAGG+CGG | + | Chr3:98174061-98174080 | None:intergenic | 65.0% | |
! | CCACGCTCAAGGTGGTGGTG+CGG | - | Chr3:98176918-98176937 | MsG0380017588.01.T01:CDS | 65.0% |
ACCGGAATGACCGGCGGCGA+AGG | + | Chr3:98173933-98173952 | None:intergenic | 70.0% | |
CAGCACCGCAAGATCGGCGG+TGG | - | Chr3:98174175-98174194 | MsG0380017588.01.T01:CDS | 70.0% | |
CCGCACCACCACCTTGAGCG+TGG | + | Chr3:98176921-98176940 | None:intergenic | 70.0% | |
GAAGAGGCGGTGGAGGAGGG+AGG | + | Chr3:98174090-98174109 | None:intergenic | 70.0% | |
GCCTTCGCCGCCGGTCATTC+CGG | - | Chr3:98173929-98173948 | MsG0380017588.01.T01:three_prime_UTR | 70.0% | |
GCTCGTAACGCCTTCGCCGC+CGG | - | Chr3:98173920-98173939 | MsG0380017588.01.T01:three_prime_UTR | 70.0% | |
GGAGGAAGAGGCGGTGGAGG+AGG | + | Chr3:98174094-98174113 | None:intergenic | 70.0% | |
GTAGTCGGAGAGAGCGGCGC+CGG | + | Chr3:98173978-98173997 | None:intergenic | 70.0% | |
TCCGCCTCCTCCACCGCCTT+TGG | - | Chr3:98174057-98174076 | MsG0380017588.01.T01:CDS | 70.0% | |
GACGCCGCCACCGCCTTTGC+CGG | - | Chr3:98174312-98174331 | MsG0380017588.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 98173661 | 98177295 | 98173661 | ID=MsG0380017588.01;Name=MsG0380017588.01 |
Chr3 | mRNA | 98173661 | 98177295 | 98173661 | ID=MsG0380017588.01.T01;Parent=MsG0380017588.01;Name=MsG0380017588.01.T01;_AED=0.17;_eAED=0.17;_QI=172|1|1|1|1|1|4|350|707 |
Chr3 | exon | 98173661 | 98174797 | 98173661 | ID=MsG0380017588.01.T01:exon:4138;Parent=MsG0380017588.01.T01 |
Chr3 | exon | 98175360 | 98175583 | 98175360 | ID=MsG0380017588.01.T01:exon:4137;Parent=MsG0380017588.01.T01 |
Chr3 | exon | 98175783 | 98175958 | 98175783 | ID=MsG0380017588.01.T01:exon:4136;Parent=MsG0380017588.01.T01 |
Chr3 | exon | 98176187 | 98177295 | 98176187 | ID=MsG0380017588.01.T01:exon:4135;Parent=MsG0380017588.01.T01 |
Chr3 | five_prime_UTR | 98177124 | 98177295 | 98177124 | ID=MsG0380017588.01.T01:five_prime_utr;Parent=MsG0380017588.01.T01 |
Chr3 | CDS | 98176187 | 98177123 | 98176187 | ID=MsG0380017588.01.T01:cds;Parent=MsG0380017588.01.T01 |
Chr3 | CDS | 98175783 | 98175958 | 98175783 | ID=MsG0380017588.01.T01:cds;Parent=MsG0380017588.01.T01 |
Chr3 | CDS | 98175360 | 98175583 | 98175360 | ID=MsG0380017588.01.T01:cds;Parent=MsG0380017588.01.T01 |
Chr3 | CDS | 98174011 | 98174797 | 98174011 | ID=MsG0380017588.01.T01:cds;Parent=MsG0380017588.01.T01 |
Chr3 | three_prime_UTR | 98173661 | 98174010 | 98173661 | ID=MsG0380017588.01.T01:three_prime_utr;Parent=MsG0380017588.01.T01 |
Gene Sequence |
Protein sequence |