Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017181.01.T01 | XP_013461731.1 | 94.034 | 352 | 21 | 0 | 1 | 352 | 1 | 352 | 0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017181.01.T01 | Q9FMH5 | 55.398 | 352 | 143 | 4 | 3 | 351 | 12 | 352 | 8.11E-132 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0380017181.01 | 0.802260 | 6.105034e-49 | 2.976990e-46 |
| MsG0080048258.01 | MsG0380017181.01 | 0.819905 | 9.084402e-53 | 7.082667e-50 |
| MsG0080048775.01 | MsG0380017181.01 | 0.839106 | 1.932668e-57 | 2.641774e-54 |
| MsG0080048781.01 | MsG0380017181.01 | 0.846970 | 1.553649e-59 | 2.720404e-56 |
| MsG0180001293.01 | MsG0380017181.01 | 0.849260 | 3.623517e-60 | 6.830637e-57 |
| MsG0180001719.01 | MsG0380017181.01 | 0.825675 | 4.119802e-54 | 3.780553e-51 |
| MsG0180002134.01 | MsG0380017181.01 | 0.825451 | 4.654923e-54 | 4.244139e-51 |
| MsG0180002218.01 | MsG0380017181.01 | 0.841295 | 5.181466e-58 | 7.578829e-55 |
| MsG0180002397.01 | MsG0380017181.01 | 0.881837 | 1.721233e-70 | 1.024033e-66 |
| MsG0180002583.01 | MsG0380017181.01 | 0.845314 | 4.386265e-59 | 7.280891e-56 |
| MsG0180003421.01 | MsG0380017181.01 | 0.823261 | 1.523673e-53 | 1.305357e-50 |
| MsG0180003485.01 | MsG0380017181.01 | 0.829857 | 4.071206e-55 | 4.218689e-52 |
| MsG0180003658.01 | MsG0380017181.01 | 0.837300 | 5.638358e-57 | 7.292537e-54 |
| MsG0180003698.01 | MsG0380017181.01 | 0.828468 | 8.842494e-55 | 8.796862e-52 |
| MsG0180003796.01 | MsG0380017181.01 | 0.819317 | 1.237272e-52 | 9.488365e-50 |
| MsG0180003857.01 | MsG0380017181.01 | 0.841251 | 5.320798e-58 | 7.772108e-55 |
| MsG0180003905.01 | MsG0380017181.01 | 0.816323 | 5.866236e-52 | 4.143979e-49 |
| MsG0180004120.01 | MsG0380017181.01 | 0.868016 | 8.928262e-66 | 3.181006e-62 |
| MsG0180004126.01 | MsG0380017181.01 | 0.822815 | 1.936181e-53 | 1.638047e-50 |
| MsG0180004185.01 | MsG0380017181.01 | 0.817629 | 2.986731e-52 | 2.186448e-49 |
| MsG0180004299.01 | MsG0380017181.01 | 0.826458 | 2.683880e-54 | 2.518424e-51 |
| MsG0180004471.01 | MsG0380017181.01 | 0.823313 | 1.481162e-53 | 1.270830e-50 |
| MsG0180004475.01 | MsG0380017181.01 | 0.821309 | 4.322879e-53 | 3.504347e-50 |
| MsG0180004538.01 | MsG0380017181.01 | 0.854612 | 1.096145e-61 | 2.462142e-58 |
| MsG0180004583.01 | MsG0380017181.01 | 0.852621 | 4.092536e-61 | 8.602078e-58 |
| MsG0180004972.01 | MsG0380017181.01 | 0.827968 | 1.166790e-54 | 1.144012e-51 |
| MsG0180004995.01 | MsG0380017181.01 | 0.850921 | 1.241584e-60 | 2.470933e-57 |
| MsG0180005048.01 | MsG0380017181.01 | 0.877462 | 6.163876e-69 | 3.102049e-65 |
| MsG0180005655.01 | MsG0380017181.01 | 0.815447 | 9.203673e-52 | 6.347102e-49 |
| MsG0180005835.01 | MsG0380017181.01 | 0.801269 | 9.751991e-49 | 4.637412e-46 |
| MsG0180006006.01 | MsG0380017181.01 | 0.816465 | 5.452754e-52 | 3.866442e-49 |
| MsG0180006062.01 | MsG0380017181.01 | 0.844664 | 6.572268e-59 | 1.068585e-55 |
| MsG0180006133.01 | MsG0380017181.01 | 0.882910 | 7.005740e-71 | 4.347706e-67 |
| MsG0280010579.01 | MsG0380017181.01 | 0.844624 | 6.736237e-59 | 1.093918e-55 |
| MsG0380012956.01 | MsG0380017181.01 | 0.810444 | 1.148963e-50 | 6.926908e-48 |
| MsG0380013584.01 | MsG0380017181.01 | 0.825857 | 3.728571e-54 | 3.439665e-51 |
| MsG0380014666.01 | MsG0380017181.01 | 0.884237 | 2.277074e-71 | 1.491059e-67 |
| MsG0380015058.01 | MsG0380017181.01 | 0.820641 | 6.162390e-53 | 4.902975e-50 |
| MsG0380015219.01 | MsG0380017181.01 | 0.867977 | 9.191149e-66 | 3.269802e-62 |
| MsG0380015340.01 | MsG0380017181.01 | 0.856062 | 4.147934e-62 | 9.777023e-59 |
| MsG0380015394.01 | MsG0380017181.01 | 0.838212 | 3.289153e-57 | 4.374997e-54 |
| MsG0380015402.01 | MsG0380017181.01 | 0.806057 | 9.896114e-50 | 5.319533e-47 |
| MsG0380015954.01 | MsG0380017181.01 | 0.810722 | 1.000770e-50 | 6.078603e-48 |
| MsG0380016027.01 | MsG0380017181.01 | 0.827341 | 1.650919e-54 | 1.589496e-51 |
| MsG0380016091.01 | MsG0380017181.01 | 0.869110 | 3.956218e-66 | 1.467052e-62 |
| MsG0380016092.01 | MsG0380017181.01 | 0.855081 | 8.013990e-62 | 1.828269e-58 |
| MsG0380016217.01 | MsG0380017181.01 | 0.841859 | 3.679686e-58 | 5.478410e-55 |
| MsG0380016225.01 | MsG0380017181.01 | 0.861447 | 1.019297e-63 | 2.885447e-60 |
| MsG0380017128.01 | MsG0380017181.01 | 0.812449 | 4.217034e-51 | 2.682194e-48 |
| MsG0380017181.01 | MsG0380017282.01 | 0.843650 | 1.229863e-58 | 1.937315e-55 |
| MsG0380017181.01 | MsG0380017332.01 | 0.886244 | 4.047308e-72 | 2.868446e-68 |
| MsG0380017181.01 | MsG0380017361.01 | 0.829346 | 5.417958e-55 | 5.530994e-52 |
| MsG0380017181.01 | MsG0380017588.01 | 0.855112 | 7.846274e-62 | 1.791744e-58 |
| MsG0380017181.01 | MsG0380017605.01 | 0.864209 | 1.433130e-64 | 4.463386e-61 |
| MsG0380017181.01 | MsG0380017632.01 | 0.838256 | 3.202973e-57 | 4.265892e-54 |
| MsG0380017181.01 | MsG0480018106.01 | 0.855675 | 5.380037e-62 | 1.251980e-58 |
| MsG0380017181.01 | MsG0480018228.01 | 0.849535 | 3.038562e-60 | 5.777805e-57 |
| MsG0380017181.01 | MsG0480018526.01 | 0.860266 | 2.328189e-63 | 6.326286e-60 |
| MsG0380017181.01 | MsG0480018785.01 | 0.831401 | 1.704462e-55 | 1.847561e-52 |
| MsG0380017181.01 | MsG0480020366.01 | 0.869592 | 2.758609e-66 | 1.040975e-62 |
| MsG0380017181.01 | MsG0480020398.01 | 0.870434 | 1.463413e-66 | 5.691792e-63 |
| MsG0380017181.01 | MsG0480020856.01 | 0.842582 | 2.367928e-58 | 3.606597e-55 |
| MsG0380017181.01 | MsG0480020937.01 | 0.801933 | 7.126531e-49 | 3.446266e-46 |
| MsG0380017181.01 | MsG0480020970.01 | 0.802147 | 6.440449e-49 | 3.131513e-46 |
| MsG0380017181.01 | MsG0480020971.01 | 0.808809 | 2.580426e-50 | 1.489754e-47 |
| MsG0380017181.01 | MsG0480021100.01 | 0.810001 | 1.431644e-50 | 8.531973e-48 |
| MsG0380017181.01 | MsG0480021301.01 | 0.839958 | 1.160508e-57 | 1.628726e-54 |
| MsG0380017181.01 | MsG0480021773.01 | 0.824986 | 5.995569e-54 | 5.395297e-51 |
| MsG0380017181.01 | MsG0480021901.01 | 0.829113 | 6.173346e-55 | 6.258105e-52 |
| MsG0380017181.01 | MsG0480021902.01 | 0.864316 | 1.327300e-64 | 4.149219e-61 |
| MsG0380017181.01 | MsG0480022307.01 | 0.830535 | 2.781312e-55 | 2.938462e-52 |
| MsG0380017181.01 | MsG0480022320.01 | 0.841523 | 4.512240e-58 | 6.647910e-55 |
| MsG0380017181.01 | MsG0480022378.01 | 0.803813 | 2.914653e-49 | 1.478867e-46 |
| MsG0380017181.01 | MsG0480022559.01 | 0.823437 | 1.385978e-53 | 1.193294e-50 |
| MsG0380017181.01 | MsG0480022784.01 | 0.879683 | 1.019699e-69 | 5.579949e-66 |
| MsG0380017181.01 | MsG0480022991.01 | 0.833541 | 5.026949e-56 | 5.807263e-53 |
| MsG0380017181.01 | MsG0480023003.01 | 0.849716 | 2.705149e-60 | 5.174636e-57 |
| MsG0380017181.01 | MsG0480023414.01 | 0.804974 | 1.669709e-49 | 8.729200e-47 |
| MsG0380017181.01 | MsG0480023424.01 | 0.858819 | 6.339396e-63 | 1.639104e-59 |
| MsG0380017181.01 | MsG0480023426.01 | 0.841234 | 5.378511e-58 | 7.851855e-55 |
| MsG0380017181.01 | MsG0480023428.01 | 0.813318 | 2.719310e-51 | 1.770047e-48 |
| MsG0380017181.01 | MsG0480023484.01 | 0.821399 | 4.121155e-53 | 3.349186e-50 |
| MsG0380017181.01 | MsG0480023626.01 | 0.800917 | 1.150981e-48 | 5.424998e-46 |
| MsG0380017181.01 | MsG0480023653.01 | 0.805647 | 1.206717e-49 | 6.418608e-47 |
| MsG0380017181.01 | MsG0480023672.01 | 0.807126 | 5.885689e-50 | 3.251587e-47 |
| MsG0380017181.01 | MsG0480023706.01 | 0.892845 | 1.089556e-74 | 1.012826e-70 |
| MsG0380017181.01 | MsG0480024002.01 | 0.815674 | 8.190834e-52 | 5.683978e-49 |
| MsG0380017181.01 | MsG0580024060.01 | 0.817092 | 3.944462e-52 | 2.845467e-49 |
| MsG0380017181.01 | MsG0580024158.01 | 0.806700 | 7.240944e-50 | 3.956600e-47 |
| MsG0380017181.01 | MsG0580024276.01 | 0.840558 | 8.087563e-58 | 1.156324e-54 |
| MsG0380017181.01 | MsG0580024742.01 | 0.842555 | 2.407287e-58 | 3.663467e-55 |
| MsG0380017181.01 | MsG0580024748.01 | 0.801858 | 7.383144e-49 | 3.563735e-46 |
| MsG0380017181.01 | MsG0580024787.01 | 0.849844 | 2.491025e-60 | 4.785203e-57 |
| MsG0380017181.01 | MsG0580024813.01 | 0.802065 | 6.693346e-49 | 3.247758e-46 |
| MsG0380017181.01 | MsG0580024835.01 | 0.804824 | 1.794800e-49 | 9.347221e-47 |
| MsG0380017181.01 | MsG0580024954.01 | 0.887757 | 1.078006e-72 | 8.122110e-69 |
| MsG0380017181.01 | MsG0580025093.01 | 0.807400 | 5.150374e-50 | 2.865874e-47 |
| MsG0380017181.01 | MsG0580025177.01 | 0.870336 | 1.575848e-66 | 6.107434e-63 |
| MsG0380017181.01 | MsG0580025186.01 | 0.841532 | 4.488788e-58 | 6.614977e-55 |
| MsG0380017181.01 | MsG0580025203.01 | 0.844627 | 6.725698e-59 | 1.092285e-55 |
| MsG0380017181.01 | MsG0580025504.01 | 0.843079 | 1.746909e-58 | 2.702061e-55 |
| MsG0380017181.01 | MsG0580025506.01 | 0.857408 | 1.665796e-62 | 4.107128e-59 |
| MsG0380017181.01 | MsG0580025775.01 | 0.800445 | 1.436678e-48 | 6.690704e-46 |
| MsG0380017181.01 | MsG0580028756.01 | 0.835409 | 1.706907e-56 | 2.085514e-53 |
| MsG0380017181.01 | MsG0580028927.01 | 0.842191 | 3.005923e-58 | 4.521808e-55 |
| MsG0380017181.01 | MsG0580028955.01 | 0.847001 | 1.523860e-59 | 2.670651e-56 |
| MsG0380017181.01 | MsG0580029197.01 | 0.831167 | 1.946140e-55 | 2.094948e-52 |
| MsG0380017181.01 | MsG0580029591.01 | 0.883588 | 3.952564e-71 | 2.521595e-67 |
| MsG0380017181.01 | MsG0680031148.01 | 0.807097 | 5.969127e-50 | 3.295268e-47 |
| MsG0380017181.01 | MsG0680031616.01 | 0.822038 | 2.933871e-53 | 2.427618e-50 |
| MsG0380017181.01 | MsG0680033405.01 | 0.813791 | 2.140253e-51 | 1.411118e-48 |
| MsG0380017181.01 | MsG0680034415.01 | 0.821661 | 3.585009e-53 | 2.934946e-50 |
| MsG0380017181.01 | MsG0680034651.01 | 0.807031 | 6.163898e-50 | 3.397109e-47 |
| MsG0380017181.01 | MsG0680034764.01 | 0.814202 | 1.737224e-51 | 1.158191e-48 |
| MsG0380017181.01 | MsG0680035350.01 | 0.834280 | 3.283734e-56 | 3.878650e-53 |
| MsG0380017181.01 | MsG0680035776.01 | 0.883770 | 3.386273e-71 | 2.176230e-67 |
| MsG0380017181.01 | MsG0680035792.01 | 0.837955 | 3.830217e-57 | 5.055531e-54 |
| MsG0380017181.01 | MsG0780036534.01 | 0.811833 | 5.745723e-51 | 3.593869e-48 |
| MsG0380017181.01 | MsG0780036553.01 | 0.812472 | 4.167891e-51 | 2.652561e-48 |
| MsG0380017181.01 | MsG0780038402.01 | 0.820442 | 6.845397e-53 | 5.417144e-50 |
| MsG0380017181.01 | MsG0780038736.01 | 0.863849 | 1.855615e-64 | 5.706664e-61 |
| MsG0380017181.01 | MsG0780038952.01 | 0.804042 | 2.612353e-49 | 1.333316e-46 |
| MsG0380017181.01 | MsG0780039861.01 | 0.831334 | 1.770646e-55 | 1.915489e-52 |
| MsG0380017181.01 | MsG0780040364.01 | 0.864854 | 9.009068e-65 | 2.870002e-61 |
| MsG0380017181.01 | MsG0780040620.01 | 0.846987 | 1.537891e-59 | 2.694048e-56 |
| MsG0380017181.01 | MsG0780040641.01 | 0.886759 | 2.586176e-72 | 1.871152e-68 |
| MsG0380017181.01 | MsG0780040899.01 | 0.827581 | 1.445587e-54 | 1.401260e-51 |
| MsG0380017181.01 | MsG0780041008.01 | 0.837424 | 5.240102e-57 | 6.803887e-54 |
| MsG0380017181.01 | MsG0780041132.01 | 0.803889 | 2.810047e-49 | 1.428669e-46 |
| MsG0380017181.01 | MsG0780041142.01 | 0.818727 | 1.685746e-52 | 1.271923e-49 |
| MsG0380017181.01 | MsG0780041143.01 | 0.818322 | 2.082334e-52 | 1.553713e-49 |
| MsG0380017181.01 | MsG0780041219.01 | 0.802377 | 5.775460e-49 | 2.824851e-46 |
| MsG0380017181.01 | MsG0780041273.01 | 0.839927 | 1.182326e-57 | 1.657660e-54 |
| MsG0380017181.01 | MsG0780041359.01 | 0.860560 | 1.897572e-63 | 5.208903e-60 |
| MsG0380017181.01 | MsG0780041546.01 | 0.805939 | 1.047701e-49 | 5.614864e-47 |
| MsG0380017181.01 | MsG0880041930.01 | 0.845141 | 4.886986e-59 | 8.066026e-56 |
| MsG0380017181.01 | MsG0880042833.01 | 0.819382 | 1.195880e-52 | 9.187711e-50 |
| MsG0380017181.01 | MsG0880043752.01 | 0.802682 | 4.996653e-49 | 2.462836e-46 |
| MsG0380017181.01 | MsG0880044103.01 | 0.800876 | 1.173163e-48 | 5.523930e-46 |
| MsG0380017181.01 | MsG0880044437.01 | 0.807383 | 5.191197e-50 | 2.887340e-47 |
| MsG0380017181.01 | MsG0880044989.01 | 0.824051 | 9.950712e-54 | 8.716877e-51 |
| MsG0380017181.01 | MsG0880045015.01 | 0.824040 | 1.001361e-53 | 8.768984e-51 |
| MsG0380017181.01 | MsG0880045356.01 | 0.807749 | 4.340867e-50 | 2.437491e-47 |
| MsG0380017181.01 | MsG0880045439.01 | 0.834233 | 3.374749e-56 | 3.980062e-53 |
| MsG0380017181.01 | MsG0880045584.01 | 0.829431 | 5.167580e-55 | 5.287827e-52 |
| MsG0380017181.01 | MsG0880045612.01 | 0.866649 | 2.442691e-65 | 8.295368e-62 |
| MsG0380017181.01 | MsG0880045647.01 | 0.858609 | 7.326734e-63 | 1.880698e-59 |
| MsG0380017181.01 | MsG0880045989.01 | 0.812571 | 3.964862e-51 | 2.529785e-48 |
| MsG0380017181.01 | MsG0880046431.01 | 0.812588 | 3.930588e-51 | 2.509079e-48 |
| MsG0380017181.01 | MsG0880046904.01 | 0.865025 | 7.963204e-65 | 2.553684e-61 |
| MsG0380017181.01 | MsG0880046905.01 | 0.853062 | 3.063456e-61 | 6.535355e-58 |
| MsG0380017181.01 | MsG0880046906.01 | 0.826799 | 2.224758e-54 | 2.107996e-51 |
| MsG0380017181.01 | MsG0880046993.01 | 0.806053 | 9.914373e-50 | 5.328775e-47 |
| MsG0380017181.01 | MsG0880047311.01 | 0.805916 | 1.059442e-49 | 5.674348e-47 |
| MsG0380017181.01 | MsG0880047649.01 | 0.863563 | 2.276868e-64 | 6.931767e-61 |
| MsG0280006540.01 | MsG0380017181.01 | 0.819367 | 1.205206e-52 | 9.255540e-50 |
| MsG0280006563.01 | MsG0380017181.01 | 0.837489 | 5.043122e-57 | 6.561435e-54 |
| MsG0280006717.01 | MsG0380017181.01 | 0.815029 | 1.139896e-51 | 7.771555e-49 |
| MsG0280007003.01 | MsG0380017181.01 | 0.857610 | 1.451359e-62 | 3.603248e-59 |
| MsG0280007092.01 | MsG0380017181.01 | 0.835243 | 1.879713e-56 | 2.285407e-53 |
| MsG0280007492.01 | MsG0380017181.01 | 0.821388 | 4.146024e-53 | 3.368386e-50 |
| MsG0280009216.01 | MsG0380017181.01 | 0.803271 | 3.774450e-49 | 1.888613e-46 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017181.01.T01 | MTR_3g102530 | 94.034 | 352 | 21 | 0 | 1 | 352 | 1 | 352 | 0.0 | 678 |
| MsG0380017181.01.T01 | MTR_3g102520 | 69.081 | 359 | 104 | 3 | 1 | 352 | 1 | 359 | 4.42e-176 | 493 |
| MsG0380017181.01.T01 | MTR_3g102510 | 68.802 | 359 | 86 | 5 | 1 | 352 | 1 | 340 | 2.92e-173 | 485 |
| MsG0380017181.01.T01 | MTR_1g018680 | 62.825 | 269 | 100 | 0 | 82 | 350 | 89 | 357 | 3.68e-120 | 351 |
| MsG0380017181.01.T01 | MTR_3g102560 | 51.714 | 350 | 141 | 5 | 1 | 349 | 2 | 324 | 1.03e-109 | 323 |
| MsG0380017181.01.T01 | MTR_3g102540 | 57.252 | 262 | 106 | 3 | 88 | 349 | 13 | 268 | 3.64e-96 | 287 |
| MsG0380017181.01.T01 | MTR_3g107970 | 49.810 | 263 | 130 | 1 | 80 | 342 | 209 | 469 | 1.05e-84 | 265 |
| MsG0380017181.01.T01 | MTR_1g011470 | 49.049 | 263 | 132 | 1 | 80 | 342 | 157 | 417 | 8.68e-83 | 258 |
| MsG0380017181.01.T01 | MTR_3g088415 | 46.442 | 267 | 141 | 1 | 84 | 350 | 240 | 504 | 2.51e-81 | 256 |
| MsG0380017181.01.T01 | MTR_3g088405 | 46.642 | 268 | 139 | 2 | 84 | 349 | 243 | 508 | 6.04e-80 | 253 |
| MsG0380017181.01.T01 | MTR_2g102520 | 45.361 | 291 | 148 | 4 | 67 | 349 | 192 | 479 | 3.66e-74 | 237 |
| MsG0380017181.01.T01 | MTR_2g102550 | 45.489 | 266 | 142 | 2 | 84 | 349 | 167 | 429 | 1.30e-73 | 234 |
| MsG0380017181.01.T01 | MTR_3g088415 | 49.261 | 203 | 101 | 1 | 84 | 286 | 240 | 440 | 5.63e-66 | 215 |
| MsG0380017181.01.T01 | MTR_3g088415 | 52.703 | 148 | 68 | 1 | 84 | 231 | 240 | 385 | 4.50e-48 | 167 |
| MsG0380017181.01.T01 | MTR_8g074000 | 31.548 | 336 | 212 | 7 | 6 | 336 | 97 | 419 | 1.62e-45 | 161 |
| MsG0380017181.01.T01 | MTR_5g088980 | 38.710 | 217 | 127 | 3 | 112 | 327 | 189 | 400 | 1.11e-43 | 156 |
| MsG0380017181.01.T01 | MTR_5g023790 | 32.792 | 308 | 181 | 6 | 39 | 336 | 124 | 415 | 4.90e-43 | 154 |
| MsG0380017181.01.T01 | MTR_7g089080 | 34.831 | 267 | 159 | 5 | 85 | 339 | 187 | 450 | 2.94e-41 | 154 |
| MsG0380017181.01.T01 | MTR_5g023790 | 34.483 | 261 | 145 | 6 | 39 | 289 | 124 | 368 | 6.33e-39 | 142 |
| MsG0380017181.01.T01 | MTR_5g023790 | 34.615 | 208 | 116 | 4 | 39 | 236 | 124 | 321 | 1.40e-28 | 114 |
| MsG0380017181.01.T01 | MTR_3g060770 | 33.333 | 225 | 133 | 7 | 119 | 338 | 60 | 272 | 1.56e-25 | 104 |
| MsG0380017181.01.T01 | MTR_3g060410 | 34.171 | 199 | 122 | 5 | 115 | 308 | 131 | 325 | 5.48e-24 | 101 |
| MsG0380017181.01.T01 | MTR_3g061680 | 34.872 | 195 | 118 | 5 | 115 | 304 | 46 | 236 | 3.94e-23 | 97.8 |
| MsG0380017181.01.T01 | MTR_3g060820 | 33.846 | 195 | 120 | 5 | 115 | 304 | 46 | 236 | 2.27e-21 | 92.8 |
| MsG0380017181.01.T01 | MTR_3g060400 | 31.034 | 203 | 123 | 6 | 115 | 308 | 52 | 246 | 4.37e-19 | 86.7 |
| MsG0380017181.01.T01 | MTR_3g460990 | 31.034 | 203 | 123 | 6 | 115 | 308 | 52 | 246 | 4.37e-19 | 86.7 |
| MsG0380017181.01.T01 | MTR_5g044040 | 41.772 | 79 | 46 | 0 | 141 | 219 | 7 | 85 | 3.79e-14 | 68.9 |
| MsG0380017181.01.T01 | MTR_1g032850 | 30.818 | 159 | 102 | 4 | 120 | 275 | 372 | 525 | 1.18e-11 | 66.2 |
| MsG0380017181.01.T01 | MTR_5g015670 | 33.333 | 132 | 78 | 4 | 118 | 241 | 101 | 230 | 1.51e-11 | 65.1 |
| MsG0380017181.01.T01 | MTR_5g011900 | 29.452 | 146 | 102 | 1 | 112 | 257 | 95 | 239 | 2.29e-11 | 63.5 |
| MsG0380017181.01.T01 | MTR_1g107535 | 32.484 | 157 | 95 | 6 | 124 | 273 | 111 | 263 | 4.32e-11 | 63.9 |
| MsG0380017181.01.T01 | MTR_5g032550 | 27.586 | 174 | 117 | 5 | 62 | 229 | 35 | 205 | 4.85e-11 | 63.2 |
| MsG0380017181.01.T01 | MTR_5g032550 | 27.586 | 174 | 117 | 5 | 62 | 229 | 35 | 205 | 7.02e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017181.01.T01 | AT5G43080 | 55.398 | 352 | 143 | 4 | 3 | 351 | 12 | 352 | 8.27e-133 | 383 |
| MsG0380017181.01.T01 | AT5G43080 | 54.545 | 352 | 141 | 5 | 3 | 351 | 12 | 347 | 8.31e-129 | 373 |
| MsG0380017181.01.T01 | AT1G47210 | 52.355 | 361 | 158 | 3 | 3 | 351 | 11 | 369 | 7.68e-127 | 369 |
| MsG0380017181.01.T01 | AT1G47230 | 52.355 | 361 | 151 | 4 | 3 | 351 | 11 | 362 | 2.15e-125 | 365 |
| MsG0380017181.01.T01 | AT1G47230 | 52.210 | 362 | 151 | 5 | 3 | 351 | 11 | 363 | 1.90e-123 | 360 |
| MsG0380017181.01.T01 | AT1G47220 | 56.184 | 283 | 124 | 0 | 69 | 351 | 41 | 323 | 3.30e-108 | 320 |
| MsG0380017181.01.T01 | AT1G44110 | 40.909 | 352 | 196 | 4 | 2 | 349 | 114 | 457 | 2.37e-82 | 258 |
| MsG0380017181.01.T01 | AT1G80370 | 50.000 | 266 | 130 | 2 | 84 | 349 | 197 | 459 | 4.70e-82 | 257 |
| MsG0380017181.01.T01 | AT5G11300 | 50.195 | 257 | 126 | 1 | 84 | 340 | 172 | 426 | 1.27e-81 | 255 |
| MsG0380017181.01.T01 | AT5G25380 | 38.642 | 383 | 195 | 5 | 4 | 349 | 56 | 435 | 1.45e-79 | 250 |
| MsG0380017181.01.T01 | AT5G25380 | 38.642 | 383 | 195 | 5 | 4 | 349 | 56 | 435 | 1.45e-79 | 250 |
| MsG0380017181.01.T01 | AT5G25380 | 47.368 | 266 | 137 | 2 | 84 | 349 | 179 | 441 | 3.15e-79 | 249 |
| MsG0380017181.01.T01 | AT1G15570 | 48.120 | 266 | 135 | 2 | 84 | 349 | 188 | 450 | 1.82e-77 | 245 |
| MsG0380017181.01.T01 | AT5G25380 | 37.808 | 365 | 188 | 4 | 4 | 331 | 56 | 418 | 1.33e-74 | 237 |
| MsG0380017181.01.T01 | AT1G77390 | 43.985 | 266 | 147 | 1 | 84 | 349 | 178 | 441 | 3.62e-74 | 236 |
| MsG0380017181.01.T01 | AT5G11300 | 49.550 | 222 | 101 | 2 | 84 | 296 | 172 | 391 | 4.63e-68 | 219 |
| MsG0380017181.01.T01 | AT1G47210 | 47.826 | 184 | 82 | 3 | 3 | 174 | 11 | 192 | 2.57e-44 | 151 |
| MsG0380017181.01.T01 | AT3G11520 | 39.583 | 240 | 135 | 5 | 91 | 329 | 164 | 394 | 3.73e-44 | 157 |
| MsG0380017181.01.T01 | AT5G06150 | 37.255 | 255 | 146 | 6 | 84 | 336 | 182 | 424 | 8.37e-43 | 154 |
| MsG0380017181.01.T01 | AT3G11520 | 41.818 | 220 | 118 | 5 | 91 | 309 | 164 | 374 | 1.52e-42 | 152 |
| MsG0380017181.01.T01 | AT2G26760 | 38.372 | 258 | 149 | 4 | 84 | 340 | 130 | 378 | 1.54e-41 | 149 |
| MsG0380017181.01.T01 | AT4G37490 | 35.496 | 262 | 153 | 5 | 84 | 339 | 165 | 416 | 5.73e-40 | 146 |
| MsG0380017181.01.T01 | AT1G20610 | 34.222 | 225 | 142 | 2 | 112 | 336 | 202 | 420 | 7.80e-38 | 140 |
| MsG0380017181.01.T01 | AT1G16330 | 29.358 | 327 | 203 | 7 | 30 | 345 | 338 | 647 | 2.22e-37 | 142 |
| MsG0380017181.01.T01 | AT4G35620 | 38.496 | 226 | 133 | 2 | 112 | 337 | 197 | 416 | 5.03e-37 | 138 |
| MsG0380017181.01.T01 | AT1G76310 | 32.812 | 256 | 162 | 5 | 84 | 338 | 177 | 423 | 2.84e-36 | 136 |
| MsG0380017181.01.T01 | AT2G17620 | 35.659 | 258 | 157 | 4 | 84 | 341 | 171 | 419 | 3.18e-35 | 133 |
| MsG0380017181.01.T01 | AT4G35620 | 41.622 | 185 | 99 | 3 | 112 | 296 | 197 | 372 | 3.89e-33 | 127 |
| MsG0380017181.01.T01 | AT1G76310 | 35.268 | 224 | 131 | 7 | 84 | 306 | 177 | 387 | 4.39e-33 | 127 |
| MsG0380017181.01.T01 | AT1G76310 | 30.070 | 286 | 158 | 7 | 84 | 338 | 177 | 451 | 2.70e-31 | 123 |
| MsG0380017181.01.T01 | AT5G06150 | 40.645 | 155 | 88 | 3 | 84 | 238 | 182 | 332 | 6.51e-28 | 112 |
| MsG0380017181.01.T01 | AT1G76310 | 35.754 | 179 | 106 | 4 | 69 | 246 | 167 | 337 | 4.55e-25 | 104 |
| MsG0380017181.01.T01 | AT1G20590 | 35.032 | 157 | 96 | 2 | 148 | 304 | 66 | 216 | 1.79e-23 | 98.2 |
| MsG0380017181.01.T01 | AT1G14750 | 31.928 | 166 | 103 | 4 | 114 | 275 | 213 | 372 | 5.33e-14 | 73.2 |
| MsG0380017181.01.T01 | AT1G14750 | 31.928 | 166 | 103 | 4 | 114 | 275 | 381 | 540 | 1.41e-13 | 72.4 |
| MsG0380017181.01.T01 | AT1G14750 | 31.928 | 166 | 103 | 4 | 114 | 275 | 381 | 540 | 1.69e-13 | 72.0 |
| MsG0380017181.01.T01 | AT1G14750 | 32.530 | 166 | 101 | 5 | 114 | 275 | 213 | 371 | 6.83e-13 | 69.7 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.00e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.00e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.00e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.00e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.00e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 29.268 | 164 | 92 | 4 | 71 | 234 | 256 | 395 | 5.02e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 29.268 | 164 | 92 | 4 | 71 | 234 | 256 | 395 | 5.02e-11 | 64.3 |
| MsG0380017181.01.T01 | AT1G34460 | 29.268 | 164 | 92 | 4 | 71 | 234 | 245 | 384 | 5.44e-11 | 63.9 |
| MsG0380017181.01.T01 | AT1G34460 | 27.228 | 202 | 121 | 6 | 34 | 234 | 222 | 398 | 5.47e-11 | 63.9 |
Find 64 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTAATGATTCGGTATTTC+TGG | 0.133993 | 3:+93059760 | None:intergenic |
| AACATTGAGATTTGGTAAAT+TGG | 0.141731 | 3:+93061386 | None:intergenic |
| TATAAGATTCTTGCCTTCTA+TGG | 0.225037 | 3:-93060200 | MsG0380017181.01.T01:CDS |
| CGAAAAGCATCAGATTTCTT+TGG | 0.242110 | 3:+93061330 | None:intergenic |
| TTCTTCAAAGCTTGGGGTTT+AGG | 0.269795 | 3:+93061360 | None:intergenic |
| TGTGTTTCAGGGAGTTTATT+GGG | 0.316830 | 3:-93060409 | MsG0380017181.01.T01:intron |
| TTGTGTTTCAGGGAGTTTAT+TGG | 0.330833 | 3:-93060410 | MsG0380017181.01.T01:intron |
| CTTAAGATTCTTCAAAGCTT+GGG | 0.349798 | 3:+93061353 | None:intergenic |
| CTGCATCATTGAAAGCTGTT+AGG | 0.351797 | 3:-93059925 | MsG0380017181.01.T01:CDS |
| TTAGGAGAAACATTGAGATT+TGG | 0.357415 | 3:+93061378 | None:intergenic |
| TGCAAATATGAGAGGGATAC+TGG | 0.359853 | 3:-93061028 | MsG0380017181.01.T01:CDS |
| ACATTGAGATTTGGTAAATT+GGG | 0.388776 | 3:+93061387 | None:intergenic |
| ACTGGTGGATTGGTTGGTTG+AGG | 0.392164 | 3:-93061010 | MsG0380017181.01.T01:CDS |
| CTCCATTGAGCGAAGATAGT+TGG | 0.398802 | 3:+93061209 | None:intergenic |
| ATTTACCTGTTTCAGCTCAT+AGG | 0.414612 | 3:+93060706 | None:intergenic |
| TTCCAACTATCTTCGCTCAA+TGG | 0.418966 | 3:-93061211 | MsG0380017181.01.T01:CDS |
| TTCTCAATGTAACCAATCAT+TGG | 0.419188 | 3:+93061069 | None:intergenic |
| CATAGGTGTTATCAGTAATC+TGG | 0.421415 | 3:+93060723 | None:intergenic |
| ATGATTTGTATTTGGTAAGA+AGG | 0.426700 | 3:-93059949 | MsG0380017181.01.T01:CDS |
| AGGGATACTGGTGGATTGGT+TGG | 0.431112 | 3:-93061016 | MsG0380017181.01.T01:CDS |
| GCTTAAGATTCTTCAAAGCT+TGG | 0.433122 | 3:+93061352 | None:intergenic |
| AAATGGAGACTCGTGCTTCA+AGG | 0.434250 | 3:-93061476 | MsG0380017181.01.T01:CDS |
| TCAGACCTCAAAATTACAAA+TGG | 0.435653 | 3:-93060272 | MsG0380017181.01.T01:intron |
| ACAGATGCAGCCACCATAGA+AGG | 0.440042 | 3:+93060187 | None:intergenic |
| TCTTCTTCAAAGTAATGATT+CGG | 0.449568 | 3:+93059751 | None:intergenic |
| TCTGTCCTGGAGTACATCCT+TGG | 0.470472 | 3:-93060141 | MsG0380017181.01.T01:CDS |
| AGATCTAAGCTTCAATTGCT+TGG | 0.471495 | 3:-93060901 | MsG0380017181.01.T01:CDS |
| CTGTCCTGGAGTACATCCTT+GGG | 0.473386 | 3:-93060140 | MsG0380017181.01.T01:intron |
| TAACACCTATGAGCTGAAAC+AGG | 0.475070 | 3:-93060711 | MsG0380017181.01.T01:intron |
| TGGCAGAAATCAACAGCCTT+AGG | 0.476524 | 3:+93060743 | None:intergenic |
| TTATAAATCTGCTGAGTTGG+AGG | 0.476698 | 3:-93059990 | MsG0380017181.01.T01:CDS |
| TTCGGTATTTCTGGTGATGA+AGG | 0.481066 | 3:+93059769 | None:intergenic |
| TGATTTGTATTTGGTAAGAA+GGG | 0.489410 | 3:-93059948 | MsG0380017181.01.T01:CDS |
| TGCATCATTGAAAGCTGTTA+GGG | 0.496113 | 3:-93059924 | MsG0380017181.01.T01:CDS |
| GTCTGCTACTGAAGATCTAA+AGG | 0.501507 | 3:-93060387 | MsG0380017181.01.T01:intron |
| TTTGAAACAGTTCAAGAATG+TGG | 0.504612 | 3:-93059800 | MsG0380017181.01.T01:intron |
| TGAGAGGGATACTGGTGGAT+TGG | 0.508165 | 3:-93061020 | MsG0380017181.01.T01:CDS |
| TGTATGAAACAGCAAGATGA+AGG | 0.514862 | 3:+93060956 | None:intergenic |
| AAGATTCTTGCCTTCTATGG+TGG | 0.516025 | 3:-93060197 | MsG0380017181.01.T01:CDS |
| TTGGAAATATCAGCTGCATA+AGG | 0.517296 | 3:+93061228 | None:intergenic |
| GCTAGATTCATAATCTGTCC+TGG | 0.524506 | 3:-93060154 | MsG0380017181.01.T01:CDS |
| AGACTCGTGCTTCAAGGAAG+AGG | 0.525994 | 3:-93061470 | MsG0380017181.01.T01:CDS |
| ACAGCAAGATGAAGGGTTTG+AGG | 0.530736 | 3:+93060964 | None:intergenic |
| GTATTTCTGGTGATGAAGGA+AGG | 0.551734 | 3:+93059773 | None:intergenic |
| TTAAGATTCTTCAAAGCTTG+GGG | 0.554495 | 3:+93061354 | None:intergenic |
| TGAAGAAATCTCCCCACCTA+AGG | 0.559560 | 3:-93060759 | MsG0380017181.01.T01:CDS |
| ATCTTACGATGCAATGAGCA+TGG | 0.562094 | 3:+93060870 | None:intergenic |
| TTTAGAAAAGTGTTAACATG+AGG | 0.564833 | 3:+93060519 | None:intergenic |
| TTAGAAAAGTGTTAACATGA+GGG | 0.569090 | 3:+93060520 | None:intergenic |
| CAGAAATCAACAGCCTTAGG+TGG | 0.572140 | 3:+93060746 | None:intergenic |
| TTTACCCAAGGATGTACTCC+AGG | 0.572732 | 3:+93060136 | None:intergenic |
| GTTCGTGTAGGTCATTAAGA+TGG | 0.575091 | 3:-93060583 | MsG0380017181.01.T01:intron |
| AGAAATCAACAGCCTTAGGT+GGG | 0.577007 | 3:+93060747 | None:intergenic |
| TGTTGACAGACTCATTAGAC+AGG | 0.583886 | 3:+93060923 | None:intergenic |
| ATAGTCTATCAAGCTTAGCT+CGG | 0.584406 | 3:+93060228 | None:intergenic |
| GACTCGTGCTTCAAGGAAGA+GGG | 0.598522 | 3:-93061469 | MsG0380017181.01.T01:CDS |
| CAACTATCTTCGCTCAATGG+AGG | 0.603706 | 3:-93061208 | MsG0380017181.01.T01:intron |
| GGTGTTACTGCAAATATGAG+AGG | 0.608167 | 3:-93061036 | MsG0380017181.01.T01:CDS |
| TACATTGAGAAAGTTCAAAG+AGG | 0.622312 | 3:-93061057 | MsG0380017181.01.T01:CDS |
| GTGTTACTGCAAATATGAGA+GGG | 0.631608 | 3:-93061035 | MsG0380017181.01.T01:CDS |
| GTATGAAACAGCAAGATGAA+GGG | 0.636902 | 3:+93060957 | None:intergenic |
| GAAATCAACAGCCTTAGGTG+GGG | 0.656360 | 3:+93060748 | None:intergenic |
| GGAGAAATACAAGCAACACA+AGG | 0.682277 | 3:-93059903 | MsG0380017181.01.T01:intron |
| AAATATGAGAGGGATACTGG+TGG | 0.717057 | 3:-93061025 | MsG0380017181.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTACAATTCA+TGG | - | Chr3:93060071-93060090 | MsG0380017181.01.T01:intron | 10.0% |
| !!! | ATTTTTTTTTTACAATTCAT+GGG | - | Chr3:93060072-93060091 | MsG0380017181.01.T01:intron | 10.0% |
| !!! | TTTTTAGTTTTTTGAATTTT+TGG | - | Chr3:93060095-93060114 | MsG0380017181.01.T01:intron | 10.0% |
| !! | AATTCAAACAAGAAAAAAAT+CGG | + | Chr3:93060568-93060587 | None:intergenic | 15.0% |
| !! | ATATTAACTATAACAAAGAA+AGG | + | Chr3:93061356-93061375 | None:intergenic | 15.0% |
| !!! | CAATTTTTTAAAGAAACAAA+TGG | + | Chr3:93061137-93061156 | None:intergenic | 15.0% |
| !! | TAGATTTCATTTAATTCCAT+GGG | - | Chr3:93060590-93060609 | MsG0380017181.01.T01:intron | 20.0% |
| !! | TCTTAACAACAAAAAACAAA+GGG | - | Chr3:93059794-93059813 | MsG0380017181.01.T01:intron | 20.0% |
| !! | TGTTATAGTTAATATATAGC+TGG | - | Chr3:93061361-93061380 | MsG0380017181.01.T01:CDS | 20.0% |
| !! | TTCTTAACAACAAAAAACAA+AGG | - | Chr3:93059793-93059812 | MsG0380017181.01.T01:CDS | 20.0% |
| !!! | AAATTCCATTTGTAATTTTG+AGG | + | Chr3:93060957-93060976 | None:intergenic | 20.0% |
| !!! | AAGTCATTGAATTTTGAAAT+GGG | - | Chr3:93060675-93060694 | MsG0380017181.01.T01:intron | 20.0% |
| !!! | GATTTTACATGATTTGTATT+TGG | - | Chr3:93061264-93061283 | MsG0380017181.01.T01:CDS | 20.0% |
| !!! | TAAGTCATTGAATTTTGAAA+TGG | - | Chr3:93060674-93060693 | MsG0380017181.01.T01:intron | 20.0% |
| !!! | TTTTTGTTGTTAAGAACAAT+TGG | + | Chr3:93059789-93059808 | None:intergenic | 20.0% |
| ! | CAATTAACTTCATTTCAACA+AGG | + | Chr3:93060766-93060785 | None:intergenic | 25.0% |
| ! | CTTGTTGAAATGAAGTTAAT+TGG | - | Chr3:93060764-93060783 | MsG0380017181.01.T01:CDS | 25.0% |
| ! | GTAGATTTCATTTAATTCCA+TGG | - | Chr3:93060589-93060608 | MsG0380017181.01.T01:intron | 25.0% |
| ! | TAACATCAAATATTTACCCA+AGG | + | Chr3:93061100-93061119 | None:intergenic | 25.0% |
| ! | TCTTCTTCAAAGTAATGATT+CGG | + | Chr3:93061473-93061492 | None:intergenic | 25.0% |
| !! | AACATTGAGATTTGGTAAAT+TGG | + | Chr3:93059838-93059857 | None:intergenic | 25.0% |
| !! | ACATTGAGATTTGGTAAATT+GGG | + | Chr3:93059837-93059856 | None:intergenic | 25.0% |
| !! | ATGATTTGTATTTGGTAAGA+AGG | - | Chr3:93061272-93061291 | MsG0380017181.01.T01:CDS | 25.0% |
| !! | TGATTTGTATTTGGTAAGAA+GGG | - | Chr3:93061273-93061292 | MsG0380017181.01.T01:CDS | 25.0% |
| !!! | AAAAAACAAAGGGTTGTTTT+GGG | - | Chr3:93059804-93059823 | MsG0380017181.01.T01:intron | 25.0% |
| !!! | GTTAACACTTTTCTAAAGTA+AGG | - | Chr3:93060708-93060727 | MsG0380017181.01.T01:intron | 25.0% |
| !!! | TTAGAAAAGTGTTAACATGA+GGG | + | Chr3:93060704-93060723 | None:intergenic | 25.0% |
| !!! | TTTAGAAAAGTGTTAACATG+AGG | + | Chr3:93060705-93060724 | None:intergenic | 25.0% |
| AAAAAGAGAAGACCAATGAT+TGG | - | Chr3:93060140-93060159 | MsG0380017181.01.T01:intron | 30.0% | |
| ATGTGCAATAATTGTGTTTC+AGG | - | Chr3:93060800-93060819 | MsG0380017181.01.T01:intron | 30.0% | |
| ATGTTAATTGATGTTCGTGT+AGG | - | Chr3:93060626-93060645 | MsG0380017181.01.T01:intron | 30.0% | |
| CATTATAAACAAAAGACCCA+TGG | + | Chr3:93060609-93060628 | None:intergenic | 30.0% | |
| CTTAAGATTCTTCAAAGCTT+GGG | + | Chr3:93059871-93059890 | None:intergenic | 30.0% | |
| TACATTGAGAAAGTTCAAAG+AGG | - | Chr3:93060164-93060183 | MsG0380017181.01.T01:CDS | 30.0% | |
| TATAAGATTCTTGCCTTCTA+TGG | - | Chr3:93061021-93061040 | MsG0380017181.01.T01:CDS | 30.0% | |
| TCAGACCTCAAAATTACAAA+TGG | - | Chr3:93060949-93060968 | MsG0380017181.01.T01:CDS | 30.0% | |
| TGTGCAATAATTGTGTTTCA+GGG | - | Chr3:93060801-93060820 | MsG0380017181.01.T01:intron | 30.0% | |
| TTAAGATTCTTCAAAGCTTG+GGG | + | Chr3:93059870-93059889 | None:intergenic | 30.0% | |
| TTAGGAGAAACATTGAGATT+TGG | + | Chr3:93059846-93059865 | None:intergenic | 30.0% | |
| TTCTCAATGTAACCAATCAT+TGG | + | Chr3:93060155-93060174 | None:intergenic | 30.0% | |
| ! | CAAAAAACAAAGGGTTGTTT+TGG | - | Chr3:93059803-93059822 | MsG0380017181.01.T01:intron | 30.0% |
| ! | GTTTTATAAATCTGCTGAGT+TGG | - | Chr3:93061228-93061247 | MsG0380017181.01.T01:CDS | 30.0% |
| ! | TTTGAAACAGTTCAAGAATG+TGG | - | Chr3:93061421-93061440 | MsG0380017181.01.T01:CDS | 30.0% |
| !! | AAGTAATGATTCGGTATTTC+TGG | + | Chr3:93061464-93061483 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTGATTGTTTCTC+AGG | - | Chr3:93060112-93060131 | MsG0380017181.01.T01:intron | 30.0% |
| AGATCTAAGCTTCAATTGCT+TGG | - | Chr3:93060320-93060339 | MsG0380017181.01.T01:intron | 35.0% | |
| ATAGTCTATCAAGCTTAGCT+CGG | + | Chr3:93060996-93061015 | None:intergenic | 35.0% | |
| ATTTACCTGTTTCAGCTCAT+AGG | + | Chr3:93060518-93060537 | None:intergenic | 35.0% | |
| GCTTAAGATTCTTCAAAGCT+TGG | + | Chr3:93059872-93059891 | None:intergenic | 35.0% | |
| GTATGAAACAGCAAGATGAA+GGG | + | Chr3:93060267-93060286 | None:intergenic | 35.0% | |
| TGCATCATTGAAAGCTGTTA+GGG | - | Chr3:93061297-93061316 | MsG0380017181.01.T01:CDS | 35.0% | |
| TGTATGAAACAGCAAGATGA+AGG | + | Chr3:93060268-93060287 | None:intergenic | 35.0% | |
| TGTGTTTCAGGGAGTTTATT+GGG | - | Chr3:93060812-93060831 | MsG0380017181.01.T01:intron | 35.0% | |
| TTGGAAATATCAGCTGCATA+AGG | + | Chr3:93059996-93060015 | None:intergenic | 35.0% | |
| TTGTGTTTCAGGGAGTTTAT+TGG | - | Chr3:93060811-93060830 | MsG0380017181.01.T01:intron | 35.0% | |
| ! | CATAGGTGTTATCAGTAATC+TGG | + | Chr3:93060501-93060520 | None:intergenic | 35.0% |
| ! | GTGTTACTGCAAATATGAGA+GGG | - | Chr3:93060186-93060205 | MsG0380017181.01.T01:CDS | 35.0% |
| ! | TTATAAATCTGCTGAGTTGG+AGG | - | Chr3:93061231-93061250 | MsG0380017181.01.T01:CDS | 35.0% |
| !! | CGAAAAGCATCAGATTTCTT+TGG | + | Chr3:93059894-93059913 | None:intergenic | 35.0% |
| !! | GATGCTTTTCGTTTGTTTTC+TGG | - | Chr3:93059903-93059922 | MsG0380017181.01.T01:intron | 35.0% |
| !!! | GCATTGTTTTTGCTGAAATC+TGG | + | Chr3:93059945-93059964 | None:intergenic | 35.0% |
| AAATATGAGAGGGATACTGG+TGG | - | Chr3:93060196-93060215 | MsG0380017181.01.T01:CDS | 40.0% | |
| AAGATTCTTGCCTTCTATGG+TGG | - | Chr3:93061024-93061043 | MsG0380017181.01.T01:CDS | 40.0% | |
| AGAAATCAACAGCCTTAGGT+GGG | + | Chr3:93060477-93060496 | None:intergenic | 40.0% | |
| ATCTTACGATGCAATGAGCA+TGG | + | Chr3:93060354-93060373 | None:intergenic | 40.0% | |
| CTGCATCATTGAAAGCTGTT+AGG | - | Chr3:93061296-93061315 | MsG0380017181.01.T01:CDS | 40.0% | |
| GCTAGATTCATAATCTGTCC+TGG | - | Chr3:93061067-93061086 | MsG0380017181.01.T01:CDS | 40.0% | |
| GGAGAAATACAAGCAACACA+AGG | - | Chr3:93061318-93061337 | MsG0380017181.01.T01:CDS | 40.0% | |
| GTCTGCTACTGAAGATCTAA+AGG | - | Chr3:93060834-93060853 | MsG0380017181.01.T01:intron | 40.0% | |
| GTTCGTGTAGGTCATTAAGA+TGG | - | Chr3:93060638-93060657 | MsG0380017181.01.T01:intron | 40.0% | |
| TAACACCTATGAGCTGAAAC+AGG | - | Chr3:93060510-93060529 | MsG0380017181.01.T01:intron | 40.0% | |
| TGCAAATATGAGAGGGATAC+TGG | - | Chr3:93060193-93060212 | MsG0380017181.01.T01:CDS | 40.0% | |
| TGTTGACAGACTCATTAGAC+AGG | + | Chr3:93060301-93060320 | None:intergenic | 40.0% | |
| TTCCAACTATCTTCGCTCAA+TGG | - | Chr3:93060010-93060029 | MsG0380017181.01.T01:CDS | 40.0% | |
| TTCTTCAAAGCTTGGGGTTT+AGG | + | Chr3:93059864-93059883 | None:intergenic | 40.0% | |
| !! | GGTGTTACTGCAAATATGAG+AGG | - | Chr3:93060185-93060204 | MsG0380017181.01.T01:CDS | 40.0% |
| !! | GTATTTCTGGTGATGAAGGA+AGG | + | Chr3:93061451-93061470 | None:intergenic | 40.0% |
| !! | TTCGGTATTTCTGGTGATGA+AGG | + | Chr3:93061455-93061474 | None:intergenic | 40.0% |
| ACAGCAAGATGAAGGGTTTG+AGG | + | Chr3:93060260-93060279 | None:intergenic | 45.0% | |
| CAACTATCTTCGCTCAATGG+AGG | - | Chr3:93060013-93060032 | MsG0380017181.01.T01:CDS | 45.0% | |
| CAGAAATCAACAGCCTTAGG+TGG | + | Chr3:93060478-93060497 | None:intergenic | 45.0% | |
| CTCCATTGAGCGAAGATAGT+TGG | + | Chr3:93060015-93060034 | None:intergenic | 45.0% | |
| GAAATCAACAGCCTTAGGTG+GGG | + | Chr3:93060476-93060495 | None:intergenic | 45.0% | |
| TGAAGAAATCTCCCCACCTA+AGG | - | Chr3:93060462-93060481 | MsG0380017181.01.T01:intron | 45.0% | |
| TGGCAGAAATCAACAGCCTT+AGG | + | Chr3:93060481-93060500 | None:intergenic | 45.0% | |
| TTTACCCAAGGATGTACTCC+AGG | + | Chr3:93061088-93061107 | None:intergenic | 45.0% | |
| ACAGATGCAGCCACCATAGA+AGG | + | Chr3:93061037-93061056 | None:intergenic | 50.0% | |
| AGACTCGTGCTTCAAGGAAG+AGG | - | Chr3:93059751-93059770 | MsG0380017181.01.T01:CDS | 50.0% | |
| CTGTCCTGGAGTACATCCTT+GGG | - | Chr3:93061081-93061100 | MsG0380017181.01.T01:CDS | 50.0% | |
| GACTCGTGCTTCAAGGAAGA+GGG | - | Chr3:93059752-93059771 | MsG0380017181.01.T01:CDS | 50.0% | |
| TCTGTCCTGGAGTACATCCT+TGG | - | Chr3:93061080-93061099 | MsG0380017181.01.T01:CDS | 50.0% | |
| ! | TGAGAGGGATACTGGTGGAT+TGG | - | Chr3:93060201-93060220 | MsG0380017181.01.T01:CDS | 50.0% |
| !! | ACTGGTGGATTGGTTGGTTG+AGG | - | Chr3:93060211-93060230 | MsG0380017181.01.T01:CDS | 50.0% |
| !! | AGGGATACTGGTGGATTGGT+TGG | - | Chr3:93060205-93060224 | MsG0380017181.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 93059747 | 93061496 | 93059747 | ID=MsG0380017181.01;Name=MsG0380017181.01 |
| Chr3 | mRNA | 93059747 | 93061496 | 93059747 | ID=MsG0380017181.01.T01;Parent=MsG0380017181.01;Name=MsG0380017181.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|8|0|352 |
| Chr3 | exon | 93061209 | 93061496 | 93061209 | ID=MsG0380017181.01.T01:exon:5377;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93060877 | 93061109 | 93060877 | ID=MsG0380017181.01.T01:exon:5376;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93060712 | 93060787 | 93060712 | ID=MsG0380017181.01.T01:exon:5375;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93060519 | 93060595 | 93060519 | ID=MsG0380017181.01.T01:exon:5374;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93060388 | 93060421 | 93060388 | ID=MsG0380017181.01.T01:exon:5373;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93060141 | 93060290 | 93060141 | ID=MsG0380017181.01.T01:exon:5372;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93059904 | 93060038 | 93059904 | ID=MsG0380017181.01.T01:exon:5371;Parent=MsG0380017181.01.T01 |
| Chr3 | exon | 93059747 | 93059812 | 93059747 | ID=MsG0380017181.01.T01:exon:5370;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93061209 | 93061496 | 93061209 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93060877 | 93061109 | 93060877 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93060712 | 93060787 | 93060712 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93060519 | 93060595 | 93060519 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93060388 | 93060421 | 93060388 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93060141 | 93060290 | 93060141 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93059904 | 93060038 | 93059904 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Chr3 | CDS | 93059747 | 93059812 | 93059747 | ID=MsG0380017181.01.T01:cds;Parent=MsG0380017181.01.T01 |
| Gene Sequence |
| Protein sequence |
