Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033368.01.T01 | XP_013442481.1 | 94.118 | 510 | 28 | 1 | 1 | 508 | 1 | 510 | 0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033368.01.T01 | M4ISH2 | 64.775 | 511 | 173 | 5 | 1 | 508 | 1 | 507 | 0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033368.01.T01 | A0A072TH15 | 94.118 | 510 | 28 | 1 | 1 | 508 | 1 | 510 | 0.0 | 947 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048509.01 | MsG0680033368.01 | 0.804439 | 2.158615e-49 | 1.113003e-46 |
| MsG0180003320.01 | MsG0680033368.01 | 0.822922 | 1.827691e-53 | 1.550993e-50 |
| MsG0280011046.01 | MsG0680033368.01 | 0.804723 | 1.883748e-49 | 9.785015e-47 |
| MsG0380013263.01 | MsG0680033368.01 | 0.821061 | 4.933384e-53 | 3.972076e-50 |
| MsG0680033368.01 | MsG0680033617.01 | 0.805211 | 1.489239e-49 | 7.833073e-47 |
| MsG0680033368.01 | MsG0680034238.01 | 0.805553 | 1.262751e-49 | 6.700200e-47 |
| MsG0680033368.01 | MsG0680034254.01 | 0.811491 | 6.816933e-51 | 4.225777e-48 |
| MsG0680033368.01 | MsG0680034312.01 | 0.802884 | 4.539681e-49 | 2.249132e-46 |
| MsG0680033368.01 | MsG0680034354.01 | 0.800472 | 1.418623e-48 | 6.610969e-46 |
| MsG0680033368.01 | MsG0680034356.01 | 0.803311 | 3.704184e-49 | 1.855295e-46 |
| MsG0680033368.01 | MsG0680034418.01 | 0.806062 | 9.869482e-50 | 5.305939e-47 |
| MsG0680033368.01 | MsG0780038657.01 | 0.839188 | 1.840313e-57 | 2.521917e-54 |
| MsG0680033368.01 | MsG0780040497.01 | 0.814664 | 1.372980e-51 | 9.268736e-49 |
| MsG0680033368.01 | MsG0880043953.01 | 0.804703 | 1.901601e-49 | 9.872073e-47 |
| MsG0680033368.01 | MsG0880045801.01 | 0.803857 | 2.853951e-49 | 1.449739e-46 |
| MsG0680033368.01 | MsG0880045854.01 | 0.810637 | 1.043893e-50 | 6.325906e-48 |
| MsG0680033368.01 | MsG0880046071.01 | 0.823467 | 1.363321e-53 | 1.174803e-50 |
| MsG0480019024.01 | MsG0680033368.01 | 0.843796 | 1.124006e-58 | 1.778425e-55 |
| MsG0480020118.01 | MsG0680033368.01 | 0.850358 | 1.788716e-60 | 3.494435e-57 |
| MsG0480020904.01 | MsG0680033368.01 | 0.826106 | 3.253579e-54 | 3.022579e-51 |
| MsG0480022886.01 | MsG0680033368.01 | 0.809567 | 1.775250e-50 | 1.045919e-47 |
| MsG0380017168.01 | MsG0680033368.01 | 0.827622 | 1.413066e-54 | 1.371321e-51 |
| MsG0380017901.01 | MsG0680033368.01 | 0.807884 | 4.064758e-50 | 2.290361e-47 |
| MsG0580026311.01 | MsG0680033368.01 | 0.809043 | 2.298952e-50 | 1.335628e-47 |
| MsG0580026521.01 | MsG0680033368.01 | 0.811414 | 7.084845e-51 | 4.382895e-48 |
| MsG0280009232.01 | MsG0680033368.01 | 0.808727 | 2.686938e-50 | 1.547884e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033368.01.T01 | MTR_0161s0050 | 94.118 | 510 | 28 | 1 | 1 | 508 | 1 | 510 | 0.0 | 947 |
| MsG0680033368.01.T01 | MTR_5g076200 | 90.551 | 508 | 48 | 0 | 1 | 508 | 1 | 508 | 0.0 | 936 |
| MsG0680033368.01.T01 | MTR_5g076220 | 87.205 | 508 | 65 | 0 | 1 | 508 | 1 | 508 | 0.0 | 909 |
| MsG0680033368.01.T01 | MTR_5g076240 | 65.234 | 512 | 177 | 1 | 1 | 512 | 1 | 511 | 0.0 | 723 |
| MsG0680033368.01.T01 | MTR_8g074040 | 51.262 | 515 | 231 | 7 | 1 | 508 | 43 | 544 | 6.18e-177 | 511 |
| MsG0680033368.01.T01 | MTR_5g008800 | 50.680 | 515 | 238 | 8 | 1 | 511 | 1 | 503 | 1.17e-174 | 503 |
| MsG0680033368.01.T01 | MTR_3g064420 | 49.623 | 530 | 236 | 7 | 1 | 512 | 1 | 517 | 2.16e-173 | 501 |
| MsG0680033368.01.T01 | MTR_5g008820 | 48.538 | 513 | 250 | 6 | 1 | 511 | 1 | 501 | 1.17e-167 | 485 |
| MsG0680033368.01.T01 | MTR_2g044180 | 48.263 | 518 | 253 | 7 | 1 | 508 | 7 | 519 | 2.14e-166 | 483 |
| MsG0680033368.01.T01 | MTR_4g121600 | 47.409 | 521 | 253 | 7 | 1 | 508 | 7 | 519 | 1.47e-162 | 473 |
| MsG0680033368.01.T01 | MTR_8g074120 | 50.111 | 449 | 204 | 8 | 67 | 508 | 20 | 455 | 8.22e-146 | 429 |
| MsG0680033368.01.T01 | MTR_8g074040 | 50.797 | 439 | 196 | 7 | 77 | 508 | 1 | 426 | 6.32e-145 | 425 |
| MsG0680033368.01.T01 | MTR_2g044180 | 48.341 | 422 | 204 | 6 | 86 | 498 | 1 | 417 | 1.31e-132 | 393 |
| MsG0680033368.01.T01 | MTR_5g023730 | 42.717 | 508 | 273 | 10 | 7 | 508 | 9 | 504 | 3.44e-129 | 387 |
| MsG0680033368.01.T01 | MTR_0803s0020 | 30.992 | 484 | 305 | 12 | 14 | 492 | 235 | 694 | 3.91e-47 | 176 |
| MsG0680033368.01.T01 | MTR_5g007640 | 28.893 | 488 | 290 | 20 | 19 | 488 | 82 | 530 | 5.60e-38 | 147 |
| MsG0680033368.01.T01 | MTR_4g077900 | 27.876 | 452 | 286 | 11 | 52 | 491 | 1 | 424 | 9.74e-35 | 136 |
| MsG0680033368.01.T01 | MTR_8g039720 | 28.081 | 495 | 293 | 15 | 40 | 508 | 65 | 522 | 1.48e-34 | 137 |
| MsG0680033368.01.T01 | MTR_2g105570 | 27.991 | 468 | 288 | 15 | 40 | 488 | 54 | 491 | 1.37e-33 | 134 |
| MsG0680033368.01.T01 | MTR_1g026310 | 27.038 | 503 | 328 | 14 | 2 | 488 | 24 | 503 | 3.45e-33 | 133 |
| MsG0680033368.01.T01 | MTR_2g095510 | 26.653 | 499 | 289 | 17 | 36 | 508 | 51 | 498 | 8.77e-32 | 129 |
| MsG0680033368.01.T01 | MTR_3g088880 | 30.278 | 360 | 210 | 11 | 153 | 491 | 163 | 502 | 1.31e-31 | 128 |
| MsG0680033368.01.T01 | MTR_3g088870 | 26.969 | 508 | 283 | 15 | 17 | 491 | 52 | 504 | 9.11e-31 | 126 |
| MsG0680033368.01.T01 | MTR_5g027500 | 28.352 | 455 | 290 | 13 | 52 | 491 | 81 | 514 | 1.33e-30 | 125 |
| MsG0680033368.01.T01 | MTR_5g027480 | 27.898 | 509 | 297 | 18 | 11 | 491 | 35 | 501 | 2.32e-30 | 125 |
| MsG0680033368.01.T01 | MTR_4g128337 | 27.160 | 486 | 300 | 16 | 19 | 488 | 44 | 491 | 3.18e-30 | 124 |
| MsG0680033368.01.T01 | MTR_4g057730 | 25.662 | 491 | 307 | 13 | 36 | 508 | 51 | 501 | 1.75e-29 | 122 |
| MsG0680033368.01.T01 | MTR_4g005750 | 27.723 | 505 | 301 | 18 | 27 | 508 | 38 | 501 | 1.73e-28 | 119 |
| MsG0680033368.01.T01 | MTR_1g063120 | 27.168 | 519 | 327 | 18 | 14 | 512 | 28 | 515 | 3.24e-27 | 115 |
| MsG0680033368.01.T01 | MTR_1g090737 | 26.667 | 465 | 289 | 15 | 39 | 488 | 82 | 509 | 8.59e-27 | 114 |
| MsG0680033368.01.T01 | MTR_3g460770 | 24.805 | 512 | 319 | 17 | 19 | 508 | 33 | 500 | 6.53e-26 | 111 |
| MsG0680033368.01.T01 | MTR_2g030240 | 23.577 | 492 | 323 | 11 | 50 | 513 | 38 | 504 | 1.82e-25 | 110 |
| MsG0680033368.01.T01 | MTR_1g063110 | 25.813 | 492 | 316 | 16 | 36 | 512 | 54 | 511 | 6.17e-25 | 108 |
| MsG0680033368.01.T01 | MTR_1g073180 | 26.781 | 407 | 237 | 12 | 114 | 488 | 100 | 477 | 8.09e-24 | 105 |
| MsG0680033368.01.T01 | MTR_1g073180 | 26.781 | 407 | 237 | 12 | 114 | 488 | 122 | 499 | 9.56e-24 | 105 |
| MsG0680033368.01.T01 | MTR_4g057730 | 24.561 | 456 | 290 | 12 | 36 | 473 | 51 | 470 | 1.06e-23 | 104 |
| MsG0680033368.01.T01 | MTR_4g011790 | 27.062 | 388 | 215 | 15 | 153 | 500 | 189 | 548 | 2.12e-23 | 104 |
| MsG0680033368.01.T01 | MTR_4g011790 | 27.062 | 388 | 215 | 15 | 153 | 500 | 189 | 548 | 2.43e-23 | 104 |
| MsG0680033368.01.T01 | MTR_3g035130 | 26.981 | 467 | 287 | 14 | 40 | 490 | 32 | 460 | 1.11e-22 | 101 |
| MsG0680033368.01.T01 | MTR_1569s0010 | 30.063 | 316 | 193 | 10 | 188 | 491 | 182 | 481 | 4.57e-22 | 99.8 |
| MsG0680033368.01.T01 | MTR_1586s0010 | 23.762 | 404 | 278 | 13 | 11 | 400 | 37 | 424 | 8.80e-22 | 98.2 |
| MsG0680033368.01.T01 | MTR_4g011790 | 26.448 | 397 | 215 | 15 | 153 | 500 | 189 | 557 | 1.49e-21 | 98.6 |
| MsG0680033368.01.T01 | MTR_3g035130 | 26.337 | 486 | 298 | 16 | 40 | 508 | 32 | 474 | 3.12e-21 | 97.4 |
| MsG0680033368.01.T01 | MTR_2g095510 | 25.459 | 436 | 252 | 16 | 36 | 445 | 51 | 439 | 4.85e-21 | 96.3 |
| MsG0680033368.01.T01 | MTR_2g030240 | 25.723 | 346 | 234 | 8 | 187 | 513 | 69 | 410 | 6.51e-21 | 95.9 |
| MsG0680033368.01.T01 | MTR_1g104810 | 25.439 | 456 | 276 | 15 | 52 | 460 | 61 | 499 | 7.17e-19 | 90.5 |
| MsG0680033368.01.T01 | MTR_1g104810 | 24.837 | 459 | 275 | 14 | 52 | 460 | 128 | 566 | 8.60e-19 | 90.1 |
| MsG0680033368.01.T01 | MTR_4g057730 | 24.065 | 428 | 271 | 12 | 36 | 445 | 51 | 442 | 1.89e-18 | 88.2 |
| MsG0680033368.01.T01 | MTR_4g013210 | 26.531 | 343 | 195 | 12 | 188 | 497 | 70 | 388 | 2.65e-18 | 87.8 |
| MsG0680033368.01.T01 | MTR_4g013210 | 28.289 | 304 | 180 | 12 | 188 | 488 | 70 | 338 | 3.51e-18 | 87.0 |
| MsG0680033368.01.T01 | MTR_4g013210 | 27.796 | 313 | 188 | 12 | 188 | 497 | 222 | 499 | 5.55e-18 | 87.4 |
| MsG0680033368.01.T01 | MTR_4g013210 | 26.531 | 343 | 195 | 12 | 188 | 497 | 222 | 540 | 6.51e-18 | 87.0 |
| MsG0680033368.01.T01 | MTR_1054s0020 | 22.549 | 510 | 323 | 15 | 2 | 490 | 256 | 714 | 3.08e-14 | 75.9 |
| MsG0680033368.01.T01 | MTR_1g026470 | 25.269 | 372 | 246 | 12 | 2 | 355 | 24 | 381 | 4.08e-13 | 71.6 |
| MsG0680033368.01.T01 | MTR_1g026430 | 25.405 | 370 | 248 | 12 | 2 | 355 | 24 | 381 | 1.06e-12 | 70.5 |
| MsG0680033368.01.T01 | MTR_1g030290 | 34.783 | 161 | 88 | 6 | 322 | 476 | 443 | 592 | 1.26e-12 | 70.9 |
| MsG0680033368.01.T01 | MTR_4g013210 | 27.437 | 277 | 163 | 12 | 188 | 461 | 222 | 463 | 2.39e-12 | 69.7 |
| MsG0680033368.01.T01 | MTR_3g087980 | 48.780 | 82 | 37 | 2 | 391 | 467 | 500 | 581 | 5.38e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033368.01.T01 | AT5G16370 | 62.963 | 513 | 182 | 6 | 1 | 511 | 1 | 507 | 0.0 | 666 |
| MsG0680033368.01.T01 | AT5G16340 | 62.768 | 513 | 183 | 6 | 1 | 511 | 1 | 507 | 0.0 | 659 |
| MsG0680033368.01.T01 | AT1G21540 | 61.719 | 512 | 189 | 5 | 1 | 508 | 1 | 509 | 0.0 | 644 |
| MsG0680033368.01.T01 | AT1G75960 | 60.861 | 511 | 190 | 6 | 1 | 508 | 1 | 504 | 0.0 | 632 |
| MsG0680033368.01.T01 | AT1G21530 | 61.089 | 514 | 188 | 7 | 1 | 508 | 1 | 508 | 0.0 | 630 |
| MsG0680033368.01.T01 | AT1G21530 | 60.895 | 514 | 187 | 8 | 1 | 508 | 1 | 506 | 0.0 | 623 |
| MsG0680033368.01.T01 | AT1G77240 | 58.513 | 511 | 202 | 5 | 1 | 508 | 1 | 504 | 0.0 | 620 |
| MsG0680033368.01.T01 | AT1G66120 | 50.097 | 517 | 240 | 8 | 1 | 508 | 1 | 508 | 4.20e-176 | 508 |
| MsG0680033368.01.T01 | AT1G20560 | 50.201 | 498 | 242 | 4 | 1 | 495 | 3 | 497 | 7.02e-170 | 491 |
| MsG0680033368.01.T01 | AT1G65880 | 48.560 | 521 | 248 | 8 | 1 | 512 | 1 | 510 | 2.34e-169 | 491 |
| MsG0680033368.01.T01 | AT2G17650 | 50.291 | 515 | 242 | 6 | 4 | 508 | 51 | 561 | 3.13e-168 | 489 |
| MsG0680033368.01.T01 | AT3G16910 | 48.276 | 522 | 248 | 7 | 1 | 508 | 9 | 522 | 2.32e-167 | 486 |
| MsG0680033368.01.T01 | AT1G65890 | 48.932 | 515 | 248 | 7 | 1 | 507 | 1 | 508 | 6.30e-167 | 485 |
| MsG0680033368.01.T01 | AT1G20560 | 49.052 | 422 | 209 | 4 | 77 | 495 | 1 | 419 | 3.14e-134 | 397 |
| MsG0680033368.01.T01 | AT1G76290 | 42.020 | 495 | 272 | 5 | 1 | 492 | 1 | 483 | 2.48e-132 | 395 |
| MsG0680033368.01.T01 | AT1G68270 | 43.077 | 520 | 249 | 10 | 1 | 508 | 1 | 485 | 2.24e-131 | 392 |
| MsG0680033368.01.T01 | AT1G20510 | 28.155 | 515 | 323 | 15 | 13 | 512 | 25 | 507 | 1.70e-36 | 142 |
| MsG0680033368.01.T01 | AT4G05160 | 29.767 | 514 | 307 | 17 | 17 | 512 | 30 | 507 | 7.15e-34 | 135 |
| MsG0680033368.01.T01 | AT1G65060 | 27.613 | 507 | 308 | 17 | 21 | 511 | 63 | 526 | 6.83e-33 | 132 |
| MsG0680033368.01.T01 | AT1G20500 | 27.234 | 470 | 278 | 12 | 59 | 508 | 84 | 509 | 9.27e-33 | 132 |
| MsG0680033368.01.T01 | AT1G30520 | 26.680 | 506 | 328 | 12 | 20 | 503 | 13 | 497 | 1.11e-32 | 132 |
| MsG0680033368.01.T01 | AT1G30520 | 26.680 | 506 | 328 | 12 | 20 | 503 | 13 | 497 | 1.11e-32 | 132 |
| MsG0680033368.01.T01 | AT4G19010 | 29.284 | 461 | 271 | 14 | 59 | 499 | 93 | 518 | 2.52e-32 | 130 |
| MsG0680033368.01.T01 | AT1G20510 | 27.521 | 476 | 302 | 15 | 13 | 473 | 25 | 472 | 6.78e-32 | 128 |
| MsG0680033368.01.T01 | AT1G20480 | 27.061 | 473 | 304 | 16 | 51 | 512 | 86 | 528 | 5.19e-31 | 127 |
| MsG0680033368.01.T01 | AT3G21240 | 26.844 | 488 | 300 | 15 | 40 | 508 | 64 | 513 | 1.34e-30 | 125 |
| MsG0680033368.01.T01 | AT5G63380 | 29.524 | 315 | 200 | 7 | 186 | 491 | 203 | 504 | 3.01e-29 | 121 |
| MsG0680033368.01.T01 | AT5G38120 | 27.729 | 458 | 270 | 18 | 56 | 493 | 82 | 498 | 4.93e-28 | 117 |
| MsG0680033368.01.T01 | AT5G38120 | 27.729 | 458 | 270 | 18 | 56 | 493 | 82 | 498 | 5.55e-28 | 117 |
| MsG0680033368.01.T01 | AT1G51680 | 26.681 | 476 | 309 | 15 | 40 | 499 | 66 | 517 | 2.09e-27 | 116 |
| MsG0680033368.01.T01 | AT1G51680 | 26.681 | 476 | 309 | 15 | 40 | 499 | 66 | 517 | 2.16e-27 | 116 |
| MsG0680033368.01.T01 | AT3G21240 | 26.211 | 454 | 282 | 13 | 40 | 474 | 64 | 483 | 1.55e-26 | 113 |
| MsG0680033368.01.T01 | AT3G21240 | 26.211 | 454 | 282 | 13 | 40 | 474 | 64 | 483 | 1.55e-26 | 113 |
| MsG0680033368.01.T01 | AT3G21230 | 26.121 | 513 | 332 | 14 | 10 | 501 | 40 | 526 | 2.81e-26 | 112 |
| MsG0680033368.01.T01 | AT3G21230 | 26.121 | 513 | 332 | 13 | 10 | 501 | 40 | 526 | 2.87e-26 | 112 |
| MsG0680033368.01.T01 | AT1G20510 | 27.232 | 448 | 283 | 15 | 13 | 445 | 25 | 444 | 5.69e-26 | 111 |
| MsG0680033368.01.T01 | AT1G30520 | 26.087 | 460 | 297 | 12 | 20 | 457 | 13 | 451 | 4.44e-25 | 108 |
| MsG0680033368.01.T01 | AT1G30520 | 26.087 | 460 | 297 | 12 | 20 | 457 | 13 | 451 | 4.44e-25 | 108 |
| MsG0680033368.01.T01 | AT5G38120 | 27.169 | 438 | 258 | 18 | 56 | 473 | 82 | 478 | 1.24e-23 | 104 |
| MsG0680033368.01.T01 | AT5G38120 | 27.169 | 438 | 258 | 18 | 56 | 473 | 82 | 478 | 1.24e-23 | 104 |
| MsG0680033368.01.T01 | AT1G65060 | 26.757 | 441 | 268 | 15 | 21 | 445 | 63 | 464 | 2.27e-23 | 103 |
| MsG0680033368.01.T01 | AT1G51680 | 25.835 | 449 | 295 | 14 | 40 | 474 | 66 | 490 | 3.01e-22 | 100 |
| MsG0680033368.01.T01 | AT3G21230 | 25.620 | 484 | 315 | 12 | 10 | 474 | 40 | 497 | 5.23e-22 | 99.8 |
| MsG0680033368.01.T01 | AT1G62940 | 25.949 | 474 | 308 | 15 | 39 | 499 | 53 | 496 | 7.70e-21 | 96.3 |
| MsG0680033368.01.T01 | AT3G48990 | 25.494 | 506 | 320 | 17 | 19 | 512 | 17 | 477 | 1.06e-20 | 95.5 |
| MsG0680033368.01.T01 | AT2G47240 | 24.236 | 491 | 286 | 19 | 41 | 469 | 19 | 485 | 1.96e-17 | 85.9 |
| MsG0680033368.01.T01 | AT2G47240 | 24.236 | 491 | 286 | 19 | 41 | 469 | 78 | 544 | 2.20e-17 | 85.9 |
| MsG0680033368.01.T01 | AT2G47240 | 24.236 | 491 | 286 | 19 | 41 | 469 | 78 | 544 | 2.20e-17 | 85.9 |
| MsG0680033368.01.T01 | AT2G47240 | 24.236 | 491 | 286 | 19 | 41 | 469 | 78 | 544 | 2.20e-17 | 85.9 |
| MsG0680033368.01.T01 | AT3G16170 | 24.668 | 377 | 206 | 11 | 152 | 488 | 203 | 541 | 2.64e-16 | 82.4 |
| MsG0680033368.01.T01 | AT1G77590 | 41.053 | 95 | 49 | 3 | 391 | 480 | 352 | 444 | 4.42e-12 | 68.9 |
| MsG0680033368.01.T01 | AT1G77590 | 41.053 | 95 | 49 | 3 | 391 | 480 | 498 | 590 | 5.29e-12 | 68.9 |
Find 154 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCCCTCGGCATCGAAAA+AGG | 0.207269 | 6:-63274733 | MsG0680033368.01.T01:CDS |
| TATGCATGAGGATGGGTATT+TGG | 0.239758 | 6:-63273618 | MsG0680033368.01.T01:CDS |
| CAAGTTGAAGACATCGTTTA+TGG | 0.239986 | 6:+63274767 | None:intergenic |
| TATGGAATGACGGAGGTAAT+TGG | 0.257188 | 6:-63273914 | MsG0680033368.01.T01:CDS |
| GGATGGGTATTTGGAGATTA+AGG | 0.279026 | 6:-63273609 | MsG0680033368.01.T01:CDS |
| ATGGAATGACGGAGGTAATT+GGG | 0.286139 | 6:-63273913 | MsG0680033368.01.T01:CDS |
| AAGGGAATGGGATAGGTTTC+CGG | 0.297048 | 6:-63273867 | MsG0680033368.01.T01:CDS |
| CACTTGATTCTCTCATTGAT+TGG | 0.298752 | 6:-63274255 | MsG0680033368.01.T01:CDS |
| GTGGAATCTGGTGCGACATT+AGG | 0.315516 | 6:+63274458 | None:intergenic |
| TGACAATGCACTACACCTTT+TGG | 0.325766 | 6:+63274298 | None:intergenic |
| TTTGAGGTTAGTCATGGTTA+TGG | 0.345839 | 6:-63273932 | MsG0680033368.01.T01:CDS |
| GACAGAGCAGCCATTGTCTA+TGG | 0.351577 | 6:-63274841 | MsG0680033368.01.T01:CDS |
| CTCACACGAGCAGAGAAGTT+AGG | 0.354274 | 6:-63273956 | MsG0680033368.01.T01:CDS |
| GAGGTGTAGTTCAGCGTAAT+CGG | 0.366751 | 6:+63274337 | None:intergenic |
| TCCATGATGAGGACGAGCTT+AGG | 0.373665 | 6:+63274487 | None:intergenic |
| AGCAGAGAAGTTAGGGTTTG+AGG | 0.380621 | 6:-63273948 | MsG0680033368.01.T01:CDS |
| AAGAAGGTGAGTGGGGTTAG+AGG | 0.380690 | 6:+63274865 | None:intergenic |
| GTACATGCATCCCGCGGTTA+AGG | 0.386133 | 6:-63273519 | MsG0680033368.01.T01:CDS |
| GTTGGTGAGATAGTTGTAAA+AGG | 0.387816 | 6:-63273734 | MsG0680033368.01.T01:CDS |
| GTGTGCGTTTGTGAGTTTAA+AGG | 0.390502 | 6:-63273450 | MsG0680033368.01.T01:CDS |
| TGGAATCTGGTGCGACATTA+GGG | 0.391851 | 6:+63274459 | None:intergenic |
| CGCGGTTAAGGAGGCGGCGG+TGG | 0.401055 | 6:-63273507 | MsG0680033368.01.T01:CDS |
| GGTTAAGGAGGCGGCGGTGG+TGG | 0.404353 | 6:-63273504 | MsG0680033368.01.T01:CDS |
| TGGGATAGGTTTCCGGCGAC+AGG | 0.408903 | 6:-63273860 | MsG0680033368.01.T01:CDS |
| TGCAACGTCCACAAGAAAAC+TGG | 0.410918 | 6:+63274217 | None:intergenic |
| ATCGGATCCCACTCGGTGTC+GGG | 0.413609 | 6:+63274355 | None:intergenic |
| GACAGCATGTTAAGTACAAC+TGG | 0.415343 | 6:+63274055 | None:intergenic |
| CAGTTCTCCGTTCCAATGTC+CGG | 0.419073 | 6:-63274661 | MsG0680033368.01.T01:CDS |
| CTCTGTCTAAGAAGGTGAGT+GGG | 0.419961 | 6:+63274857 | None:intergenic |
| TCGTACATGGCCGGAGTGTT+GGG | 0.422512 | 6:+63274688 | None:intergenic |
| AAAGGTGCTTGTGTTATGTT+AGG | 0.422849 | 6:-63273716 | MsG0680033368.01.T01:CDS |
| TGTGAGGAGGGTAGGTGTGA+TGG | 0.429337 | 6:-63273810 | MsG0680033368.01.T01:CDS |
| ATCGTGCTTAACACTTTCTC+CGG | 0.431566 | 6:+63273766 | None:intergenic |
| AAGTTGAAGACATCGTTTAT+GGG | 0.432618 | 6:+63274768 | None:intergenic |
| GATTATGAAGTTTAATATCA+AGG | 0.435154 | 6:-63273390 | MsG0680033368.01.T01:CDS |
| CACAAGAAAACTGGTTGAAC+CGG | 0.443795 | 6:+63274226 | None:intergenic |
| CTCGTACATGGCCGGAGTGT+TGG | 0.448459 | 6:+63274687 | None:intergenic |
| CCATGATGAGGACGAGCTTA+GGG | 0.453828 | 6:+63274488 | None:intergenic |
| GTTGATGTGGTGGGACCCAC+CGG | 0.456396 | 6:-63273785 | MsG0680033368.01.T01:CDS |
| GGCGGCGGTGGTGGCGAGGC+CGG | 0.458446 | 6:-63273495 | MsG0680033368.01.T01:CDS |
| GCTTCATCACTTTCTTCCCT+CGG | 0.461134 | 6:-63274745 | MsG0680033368.01.T01:CDS |
| TTAGAGGTGTCGAGTTTGCT+TGG | 0.461409 | 6:+63274881 | None:intergenic |
| GAGTTTAAAGGATGAATTGA+AGG | 0.462633 | 6:-63273438 | MsG0680033368.01.T01:CDS |
| TCTCATTGATTGGTCGGTAC+CGG | 0.463835 | 6:-63274245 | MsG0680033368.01.T01:CDS |
| TCACACGAGCAGAGAAGTTA+GGG | 0.464563 | 6:-63273955 | MsG0680033368.01.T01:CDS |
| AGGTGTGATGGAGGTTGATG+TGG | 0.466121 | 6:-63273798 | MsG0680033368.01.T01:CDS |
| GAAGTTGAGGTTGTTGAGAA+TGG | 0.467112 | 6:+63274636 | None:intergenic |
| TGCTTAACACTTTCTCCGGT+GGG | 0.468139 | 6:+63273770 | None:intergenic |
| AGGGTGATCTAAATTTCAAA+TGG | 0.468926 | 6:-63274384 | MsG0680033368.01.T01:CDS |
| CCTCCTGTCAAAACATGAAC+CGG | 0.470108 | 6:+63274001 | None:intergenic |
| TTGAGAATGGCGCCGGACAT+TGG | 0.471591 | 6:+63274649 | None:intergenic |
| GAGCGTTGAGGGCAAGAGAA+AGG | 0.473889 | 6:+63274539 | None:intergenic |
| TTGTGTCGTGTGCTTGGAAA+AGG | 0.477755 | 6:-63273886 | MsG0680033368.01.T01:CDS |
| GACAGGGAAGGCGAGGATGA+AGG | 0.480010 | 6:-63273843 | MsG0680033368.01.T01:CDS |
| GCTGTTGTAAATGATTGAAA+TGG | 0.480696 | 6:+63274813 | None:intergenic |
| TGTGATGGAGGTTGATGTGG+TGG | 0.484104 | 6:-63273795 | MsG0680033368.01.T01:CDS |
| AAATGATATCCCTACTGAAA+AGG | 0.485535 | 6:-63273414 | MsG0680033368.01.T01:CDS |
| ACTGTAGATCGTTGGCGCAT+CGG | 0.492173 | 6:+63274117 | None:intergenic |
| CCCTAAGCTCGTCCTCATCA+TGG | 0.495645 | 6:-63274488 | MsG0680033368.01.T01:CDS |
| GGAACAACGTCGTCTCCAAA+AGG | 0.502607 | 6:-63274313 | MsG0680033368.01.T01:CDS |
| TGATTCTCTCATTGATTGGT+CGG | 0.504066 | 6:-63274251 | MsG0680033368.01.T01:CDS |
| AGGCAAGGTGTGAGGAGGGT+AGG | 0.505166 | 6:-63273818 | MsG0680033368.01.T01:CDS |
| ATGAGGACGAGCTTAGGGCT+TGG | 0.505757 | 6:+63274493 | None:intergenic |
| TATGAGTAGTGTGGAAGTTG+AGG | 0.508573 | 6:-63273549 | MsG0680033368.01.T01:CDS |
| CTTGGAAAAGGGAATGGGAT+AGG | 0.511420 | 6:-63273874 | MsG0680033368.01.T01:CDS |
| AACTGAAGCTCGTACATGGC+CGG | 0.512459 | 6:+63274679 | None:intergenic |
| AATCGGATCCCACTCGGTGT+CGG | 0.519092 | 6:+63274354 | None:intergenic |
| GAATAAGGAAAGAGCGTTGA+GGG | 0.519399 | 6:+63274528 | None:intergenic |
| AGGAGGCGGCGGTGGTGGCG+AGG | 0.519783 | 6:-63273499 | MsG0680033368.01.T01:CDS |
| CTAACGGATGGAGCTATCCA+TGG | 0.520941 | 6:-63274183 | MsG0680033368.01.T01:CDS |
| TACAGTTTAATTGAATCTCA+TGG | 0.522248 | 6:-63274100 | MsG0680033368.01.T01:CDS |
| TTGCAGATGTTTCATTCTAA+CGG | 0.522825 | 6:-63274199 | MsG0680033368.01.T01:CDS |
| TCAATTAAACTGTAGATCGT+TGG | 0.523143 | 6:+63274109 | None:intergenic |
| ATGAGTAGTGTGGAAGTTGA+GGG | 0.523463 | 6:-63273548 | MsG0680033368.01.T01:CDS |
| TCAAAAGATGTGATAATAAG+TGG | 0.525238 | 6:-63273581 | MsG0680033368.01.T01:CDS |
| AGCGTTGAGGGCAAGAGAAA+GGG | 0.528632 | 6:+63274540 | None:intergenic |
| GGGTGATTGTGTCGTGTGCT+TGG | 0.529071 | 6:-63273892 | MsG0680033368.01.T01:CDS |
| GCATCCCGCGGTTAAGGAGG+CGG | 0.531470 | 6:-63273513 | MsG0680033368.01.T01:CDS |
| CGGAGTGTTGGGAGAGAGGA+CGG | 0.533982 | 6:+63274699 | None:intergenic |
| GTGCTTAACACTTTCTCCGG+TGG | 0.535446 | 6:+63273769 | None:intergenic |
| TGGAATGACGGAGGTAATTG+GGG | 0.540412 | 6:-63273912 | MsG0680033368.01.T01:CDS |
| CGTGTGCTTGGAAAAGGGAA+TGG | 0.541566 | 6:-63273880 | MsG0680033368.01.T01:CDS |
| TGTAGTCAAGTCGGAAGTTG+AGG | 0.542589 | 6:+63274623 | None:intergenic |
| GAGGAGGGTAGGTGTGATGG+AGG | 0.543679 | 6:-63273807 | MsG0680033368.01.T01:CDS |
| TAGGTTTCCGGCGACAGGGA+AGG | 0.546378 | 6:-63273855 | MsG0680033368.01.T01:CDS |
| ATCCTCGCCTTCCCTGTCGC+CGG | 0.547311 | 6:+63273848 | None:intergenic |
| GCTCGTGTGAGAATCGCTGC+TGG | 0.552337 | 6:+63273968 | None:intergenic |
| GAGGTTGTTGAGAATGGCGC+CGG | 0.554251 | 6:+63274642 | None:intergenic |
| ACCGCCGCCTCCTTAACCGC+GGG | 0.555654 | 6:+63273509 | None:intergenic |
| GGCGAGGCAAGGTGTGAGGA+GGG | 0.558402 | 6:-63273822 | MsG0680033368.01.T01:CDS |
| AGATGTTTCATTCTAACGGA+TGG | 0.560519 | 6:-63274195 | MsG0680033368.01.T01:CDS |
| GTGGATGAGCAGCACGGAGA+GGG | 0.561166 | 6:+63274597 | None:intergenic |
| TTAGGGTTTGAGGTTAGTCA+TGG | 0.564663 | 6:-63273938 | MsG0680033368.01.T01:CDS |
| CTACGAGGGTCTTGTAGCGA+AGG | 0.565611 | 6:-63274404 | MsG0680033368.01.T01:CDS |
| TTCCGGCGACAGGGAAGGCG+AGG | 0.566183 | 6:-63273850 | MsG0680033368.01.T01:CDS |
| CATGCATCCCGCGGTTAAGG+AGG | 0.566561 | 6:-63273516 | MsG0680033368.01.T01:CDS |
| TAACGGATGGAGCTATCCAT+GGG | 0.568245 | 6:-63274182 | MsG0680033368.01.T01:CDS |
| AATGGCTGCTCTGTCTAAGA+AGG | 0.568396 | 6:+63274849 | None:intergenic |
| TGGCCGGAGTGTTGGGAGAG+AGG | 0.569139 | 6:+63274695 | None:intergenic |
| GCGAGGATGAAGGCGAGGCA+AGG | 0.570668 | 6:-63273833 | MsG0680033368.01.T01:CDS |
| TGGGGAATGGCTGCCGTCGG+AGG | 0.571639 | 6:-63274163 | MsG0680033368.01.T01:CDS |
| AAGATGTGATAATAAGTGGT+GGG | 0.572024 | 6:-63273577 | MsG0680033368.01.T01:CDS |
| GTGATGGAGGTTGATGTGGT+GGG | 0.572588 | 6:-63273794 | MsG0680033368.01.T01:CDS |
| GTGTGCTTGGAAAAGGGAAT+GGG | 0.579878 | 6:-63273879 | MsG0680033368.01.T01:CDS |
| CACCGCCGCCTCCTTAACCG+CGG | 0.580497 | 6:+63273508 | None:intergenic |
| TCCCGCGGTTAAGGAGGCGG+CGG | 0.581767 | 6:-63273510 | MsG0680033368.01.T01:CDS |
| GCTCTGTCTAAGAAGGTGAG+TGG | 0.585812 | 6:+63274856 | None:intergenic |
| CAGCGTAATCGGATCCCACT+CGG | 0.588318 | 6:+63274348 | None:intergenic |
| GGAAGGCGAGGATGAAGGCG+AGG | 0.588745 | 6:-63273838 | MsG0680033368.01.T01:CDS |
| GGTATTTGGAGATTAAGGAT+AGG | 0.590155 | 6:-63273604 | MsG0680033368.01.T01:CDS |
| ATGGAGCTATCCATGGGGAA+TGG | 0.590572 | 6:-63274176 | MsG0680033368.01.T01:CDS |
| ATTACGCTGAACTACACCTC+CGG | 0.590810 | 6:-63274334 | MsG0680033368.01.T01:CDS |
| TGGAGACGACGTTGTTCCGG+AGG | 0.592053 | 6:+63274318 | None:intergenic |
| GCAGATATTCGTTCCTCCGA+CGG | 0.593674 | 6:+63274150 | None:intergenic |
| GTTGCGGTTATGCATGAGGA+TGG | 0.595062 | 6:-63273626 | MsG0680033368.01.T01:CDS |
| CCGACGGCAGCCATTCCCCA+TGG | 0.595172 | 6:+63274166 | None:intergenic |
| GGAGAACTGAAGCTCGTACA+TGG | 0.595908 | 6:+63274675 | None:intergenic |
| AAAGATGTGATAATAAGTGG+TGG | 0.597902 | 6:-63273578 | MsG0680033368.01.T01:CDS |
| AGGCGAGGCAAGGTGTGAGG+AGG | 0.601328 | 6:-63273823 | MsG0680033368.01.T01:CDS |
| CCATGGGGAATGGCTGCCGT+CGG | 0.601533 | 6:-63274166 | MsG0680033368.01.T01:CDS |
| GATCCCACTCGGTGTCGGGA+CGG | 0.602762 | 6:+63274359 | None:intergenic |
| TTTAAACTCACAAACGCACA+CGG | 0.603727 | 6:+63273452 | None:intergenic |
| GGGATAGGTTTCCGGCGACA+GGG | 0.606073 | 6:-63273859 | MsG0680033368.01.T01:CDS |
| TGTTAAGCACGATGGTGTAA+CGG | 0.606231 | 6:-63273756 | MsG0680033368.01.T01:CDS |
| AGATGTGATAATAAGTGGTG+GGG | 0.607951 | 6:-63273576 | MsG0680033368.01.T01:CDS |
| TAGTCATGGTTATGGAATGA+CGG | 0.608437 | 6:-63273924 | MsG0680033368.01.T01:CDS |
| ACAACAGCACTTCATTCACA+TGG | 0.609721 | 6:-63274798 | MsG0680033368.01.T01:CDS |
| CGTGTGAGAATCGCTGCTGG+TGG | 0.612162 | 6:+63273971 | None:intergenic |
| TGAAGGCGAGGCAAGGTGTG+AGG | 0.616765 | 6:-63273826 | MsG0680033368.01.T01:CDS |
| TACGAGGGTCTTGTAGCGAA+GGG | 0.621825 | 6:-63274403 | MsG0680033368.01.T01:CDS |
| TGTGTCGTGTGCTTGGAAAA+GGG | 0.625472 | 6:-63273885 | MsG0680033368.01.T01:CDS |
| TGGGGAGAATATGAGTAGTG+TGG | 0.626299 | 6:-63273558 | MsG0680033368.01.T01:CDS |
| AATGGCGCCGGACATTGGAA+CGG | 0.629782 | 6:+63274654 | None:intergenic |
| TGATGTTGCGGTTATGCATG+AGG | 0.633251 | 6:-63273630 | MsG0680033368.01.T01:CDS |
| TTAGGGTTTCATCCATGATG+AGG | 0.633286 | 6:+63274476 | None:intergenic |
| GATCCGTCCCGACACCGAGT+GGG | 0.640892 | 6:-63274362 | MsG0680033368.01.T01:CDS |
| CGTCCTCTCTCCCAACACTC+CGG | 0.646972 | 6:-63274698 | MsG0680033368.01.T01:CDS |
| GGATCCGTCCCGACACCGAG+TGG | 0.651229 | 6:-63274363 | MsG0680033368.01.T01:CDS |
| GGAATAAGGAAAGAGCGTTG+AGG | 0.655933 | 6:+63274527 | None:intergenic |
| TTCACTGTGGATGAGCAGCA+CGG | 0.661652 | 6:+63274591 | None:intergenic |
| AACATTATGAACACCTACGA+GGG | 0.661878 | 6:-63274418 | MsG0680033368.01.T01:CDS |
| TTGCGGTTATGCATGAGGAT+GGG | 0.663646 | 6:-63273625 | MsG0680033368.01.T01:CDS |
| CTTCGCTACAAGACCCTCGT+AGG | 0.671886 | 6:+63274405 | None:intergenic |
| AAAAGATGAGAATGCCACGT+TGG | 0.673283 | 6:-63273687 | MsG0680033368.01.T01:CDS |
| TGTGGATGAGCAGCACGGAG+AGG | 0.676117 | 6:+63274596 | None:intergenic |
| TCTGTCTAAGAAGGTGAGTG+GGG | 0.680526 | 6:+63274858 | None:intergenic |
| AAGCACGATGGTGTAACGGT+TGG | 0.698876 | 6:-63273752 | MsG0680033368.01.T01:CDS |
| AAACATTATGAACACCTACG+AGG | 0.706599 | 6:-63274419 | MsG0680033368.01.T01:CDS |
| AGATGAGTTTCGATTCACTG+TGG | 0.712035 | 6:+63274578 | None:intergenic |
| AATGGAGTTGCCATAGACAA+TGG | 0.714199 | 6:+63274831 | None:intergenic |
| GGAGAAAGTGTTAAGCACGA+TGG | 0.719137 | 6:-63273764 | MsG0680033368.01.T01:CDS |
| TCATGGTTATGGAATGACGG+AGG | 0.742492 | 6:-63273921 | MsG0680033368.01.T01:CDS |
| AACGGATGGAGCTATCCATG+GGG | 0.749202 | 6:-63274181 | MsG0680033368.01.T01:CDS |
| GAACGAATATCTGCACACGT+AGG | 0.761831 | 6:-63274141 | MsG0680033368.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATAATGTTTATGTTTTT+TGG | + | Chr6:63273850-63273869 | None:intergenic | 15.0% |
| !! | GATTATGAAGTTTAATATCA+AGG | - | Chr6:63274887-63274906 | MsG0680033368.01.T01:CDS | 20.0% |
| !!! | AAATAATGGTTGGTTTTATA+CGG | - | Chr6:63274623-63274642 | MsG0680033368.01.T01:CDS | 20.0% |
| ! | AAATGAACCGTTAAAAAAAC+CGG | - | Chr6:63274257-63274276 | MsG0680033368.01.T01:CDS | 25.0% |
| ! | AGTGTATGAAAAATAATGGT+TGG | - | Chr6:63274613-63274632 | MsG0680033368.01.T01:CDS | 25.0% |
| ! | TACAGTTTAATTGAATCTCA+TGG | - | Chr6:63274177-63274196 | MsG0680033368.01.T01:CDS | 25.0% |
| ! | TCAAAAGATGTGATAATAAG+TGG | - | Chr6:63274696-63274715 | MsG0680033368.01.T01:CDS | 25.0% |
| ! | TTGGAGTGTATGAAAAATAA+TGG | - | Chr6:63274609-63274628 | MsG0680033368.01.T01:CDS | 25.0% |
| !!! | AATAATGGTTGGTTTTATAC+GGG | - | Chr6:63274624-63274643 | MsG0680033368.01.T01:CDS | 25.0% |
| !!! | ATGTTTATGTTTTTTGGAAG+TGG | + | Chr6:63273844-63273863 | None:intergenic | 25.0% |
| AAAGATGTGATAATAAGTGG+TGG | - | Chr6:63274699-63274718 | MsG0680033368.01.T01:CDS | 30.0% | |
| AAATGATATCCCTACTGAAA+AGG | - | Chr6:63274863-63274882 | MsG0680033368.01.T01:CDS | 30.0% | |
| AAGATGTGATAATAAGTGGT+GGG | - | Chr6:63274700-63274719 | MsG0680033368.01.T01:CDS | 30.0% | |
| AAGTTGAAGACATCGTTTAT+GGG | + | Chr6:63273512-63273531 | None:intergenic | 30.0% | |
| AGGGTGATCTAAATTTCAAA+TGG | - | Chr6:63273893-63273912 | MsG0680033368.01.T01:CDS | 30.0% | |
| GAGTTTAAAGGATGAATTGA+AGG | - | Chr6:63274839-63274858 | MsG0680033368.01.T01:CDS | 30.0% | |
| GCTGTTGTAAATGATTGAAA+TGG | + | Chr6:63273467-63273486 | None:intergenic | 30.0% | |
| TCAATTAAACTGTAGATCGT+TGG | + | Chr6:63274171-63274190 | None:intergenic | 30.0% | |
| TTGCAGATGTTTCATTCTAA+CGG | - | Chr6:63274078-63274097 | MsG0680033368.01.T01:CDS | 30.0% | |
| ! | TCATAATCTCCTTTTCAGTA+GGG | + | Chr6:63274875-63274894 | None:intergenic | 30.0% |
| ! | TTCATAATCTCCTTTTCAGT+AGG | + | Chr6:63274876-63274895 | None:intergenic | 30.0% |
| !!! | ACATGAACCGGTTTTTTTAA+CGG | + | Chr6:63274267-63274286 | None:intergenic | 30.0% |
| !!! | TTTATGTTTTTTGGAAGTGG+TGG | + | Chr6:63273841-63273860 | None:intergenic | 30.0% |
| AAACATTATGAACACCTACG+AGG | - | Chr6:63273858-63273877 | MsG0680033368.01.T01:CDS | 35.0% | |
| AACATTATGAACACCTACGA+GGG | - | Chr6:63273859-63273878 | MsG0680033368.01.T01:CDS | 35.0% | |
| AGATGTGATAATAAGTGGTG+GGG | - | Chr6:63274701-63274720 | MsG0680033368.01.T01:CDS | 35.0% | |
| AGATGTTTCATTCTAACGGA+TGG | - | Chr6:63274082-63274101 | MsG0680033368.01.T01:CDS | 35.0% | |
| CACTTGATTCTCTCATTGAT+TGG | - | Chr6:63274022-63274041 | MsG0680033368.01.T01:CDS | 35.0% | |
| GGTATTTGGAGATTAAGGAT+AGG | - | Chr6:63274673-63274692 | MsG0680033368.01.T01:CDS | 35.0% | |
| TAGTCATGGTTATGGAATGA+CGG | - | Chr6:63274353-63274372 | MsG0680033368.01.T01:CDS | 35.0% | |
| TTTAAACTCACAAACGCACA+CGG | + | Chr6:63274828-63274847 | None:intergenic | 35.0% | |
| ! | ATTTTTCATACACTCCAACG+TGG | + | Chr6:63274607-63274626 | None:intergenic | 35.0% |
| ! | CAAGTTGAAGACATCGTTTA+TGG | + | Chr6:63273513-63273532 | None:intergenic | 35.0% |
| ! | GTTGGTGAGATAGTTGTAAA+AGG | - | Chr6:63274543-63274562 | MsG0680033368.01.T01:CDS | 35.0% |
| ! | TGATTCTCTCATTGATTGGT+CGG | - | Chr6:63274026-63274045 | MsG0680033368.01.T01:CDS | 35.0% |
| ! | TTTGAGGTTAGTCATGGTTA+TGG | - | Chr6:63274345-63274364 | MsG0680033368.01.T01:CDS | 35.0% |
| !! | AAAGGTGCTTGTGTTATGTT+AGG | - | Chr6:63274561-63274580 | MsG0680033368.01.T01:CDS | 35.0% |
| !!! | TTGCTTGGTTTTTGGTTAAC+TGG | + | Chr6:63273384-63273403 | None:intergenic | 35.0% |
| AAAAGATGAGAATGCCACGT+TGG | - | Chr6:63274590-63274609 | MsG0680033368.01.T01:CDS | 40.0% | |
| AATGGAGTTGCCATAGACAA+TGG | + | Chr6:63273449-63273468 | None:intergenic | 40.0% | |
| ACAACAGCACTTCATTCACA+TGG | - | Chr6:63273479-63273498 | MsG0680033368.01.T01:CDS | 40.0% | |
| AGATGAGTTTCGATTCACTG+TGG | + | Chr6:63273702-63273721 | None:intergenic | 40.0% | |
| ATCGTGCTTAACACTTTCTC+CGG | + | Chr6:63274514-63274533 | None:intergenic | 40.0% | |
| ATGAGTAGTGTGGAAGTTGA+GGG | - | Chr6:63274729-63274748 | MsG0680033368.01.T01:CDS | 40.0% | |
| CACAAGAAAACTGGTTGAAC+CGG | + | Chr6:63274054-63274073 | None:intergenic | 40.0% | |
| GAAGTTGAGGTTGTTGAGAA+TGG | + | Chr6:63273644-63273663 | None:intergenic | 40.0% | |
| GACAGCATGTTAAGTACAAC+TGG | + | Chr6:63274225-63274244 | None:intergenic | 40.0% | |
| GGATGGGTATTTGGAGATTA+AGG | - | Chr6:63274668-63274687 | MsG0680033368.01.T01:CDS | 40.0% | |
| GTGTGCGTTTGTGAGTTTAA+AGG | - | Chr6:63274827-63274846 | MsG0680033368.01.T01:CDS | 40.0% | |
| TATGAGTAGTGTGGAAGTTG+AGG | - | Chr6:63274728-63274747 | MsG0680033368.01.T01:CDS | 40.0% | |
| TATGCATGAGGATGGGTATT+TGG | - | Chr6:63274659-63274678 | MsG0680033368.01.T01:CDS | 40.0% | |
| TGTTAAGCACGATGGTGTAA+CGG | - | Chr6:63274521-63274540 | MsG0680033368.01.T01:CDS | 40.0% | |
| TTAGGGTTTCATCCATGATG+AGG | + | Chr6:63273804-63273823 | None:intergenic | 40.0% | |
| ! | ATGGAATGACGGAGGTAATT+GGG | - | Chr6:63274364-63274383 | MsG0680033368.01.T01:CDS | 40.0% |
| ! | GTTTTATACGGGTGATGTTG+CGG | - | Chr6:63274635-63274654 | MsG0680033368.01.T01:CDS | 40.0% |
| ! | TATGGAATGACGGAGGTAAT+TGG | - | Chr6:63274363-63274382 | MsG0680033368.01.T01:CDS | 40.0% |
| ! | TGACAATGCACTACACCTTT+TGG | + | Chr6:63273982-63274001 | None:intergenic | 40.0% |
| ! | TTAGGGCTTGGAGTCTTTTT+GGG | + | Chr6:63273775-63273794 | None:intergenic | 40.0% |
| ! | TTAGGGTTTGAGGTTAGTCA+TGG | - | Chr6:63274339-63274358 | MsG0680033368.01.T01:CDS | 40.0% |
| !! | AGAGGGTTTTGTAGTCAAGT+CGG | + | Chr6:63273666-63273685 | None:intergenic | 40.0% |
| !! | GAATAAGGAAAGAGCGTTGA+GGG | + | Chr6:63273752-63273771 | None:intergenic | 40.0% |
| !! | TGGAGTCTTTTTGGGGAATA+AGG | + | Chr6:63273767-63273786 | None:intergenic | 40.0% |
| !! | TGTCGAGTTTGCTTGGTTTT+TGG | + | Chr6:63273392-63273411 | None:intergenic | 40.0% |
| !! | TTTTTGGAAGTGGTGGAATC+TGG | + | Chr6:63273834-63273853 | None:intergenic | 40.0% |
| !!! | AAACCGGTTCATGTTTTGAC+AGG | - | Chr6:63274273-63274292 | MsG0680033368.01.T01:CDS | 40.0% |
| AAGGGAATGGGATAGGTTTC+CGG | - | Chr6:63274410-63274429 | MsG0680033368.01.T01:CDS | 45.0% | |
| AATGGCTGCTCTGTCTAAGA+AGG | + | Chr6:63273431-63273450 | None:intergenic | 45.0% | |
| AGCAGAGAAGTTAGGGTTTG+AGG | - | Chr6:63274329-63274348 | MsG0680033368.01.T01:CDS | 45.0% | |
| ATTACGCTGAACTACACCTC+CGG | - | Chr6:63273943-63273962 | MsG0680033368.01.T01:CDS | 45.0% | |
| CCTCCTGTCAAAACATGAAC+CGG | + | Chr6:63274279-63274298 | None:intergenic | 45.0% | |
| CTCTGTCTAAGAAGGTGAGT+GGG | + | Chr6:63273423-63273442 | None:intergenic | 45.0% | |
| CTTGGAAAAGGGAATGGGAT+AGG | - | Chr6:63274403-63274422 | MsG0680033368.01.T01:CDS | 45.0% | |
| GAACGAATATCTGCACACGT+AGG | - | Chr6:63274136-63274155 | MsG0680033368.01.T01:CDS | 45.0% | |
| GAGGTGTAGTTCAGCGTAAT+CGG | + | Chr6:63273943-63273962 | None:intergenic | 45.0% | |
| GCTTCATCACTTTCTTCCCT+CGG | - | Chr6:63273532-63273551 | MsG0680033368.01.T01:CDS | 45.0% | |
| GTCTCTCCCCAAAAATCATC+CGG | + | Chr6:63274804-63274823 | None:intergenic | 45.0% | |
| GTGTGCTTGGAAAAGGGAAT+GGG | - | Chr6:63274398-63274417 | MsG0680033368.01.T01:CDS | 45.0% | |
| TCACACGAGCAGAGAAGTTA+GGG | - | Chr6:63274322-63274341 | MsG0680033368.01.T01:CDS | 45.0% | |
| TCATGGTTATGGAATGACGG+AGG | - | Chr6:63274356-63274375 | MsG0680033368.01.T01:CDS | 45.0% | |
| TCTGTCTAAGAAGGTGAGTG+GGG | + | Chr6:63273422-63273441 | None:intergenic | 45.0% | |
| TGATGTTGCGGTTATGCATG+AGG | - | Chr6:63274647-63274666 | MsG0680033368.01.T01:CDS | 45.0% | |
| TGCAACGTCCACAAGAAAAC+TGG | + | Chr6:63274063-63274082 | None:intergenic | 45.0% | |
| TGCTTAACACTTTCTCCGGT+GGG | + | Chr6:63274510-63274529 | None:intergenic | 45.0% | |
| TGGAATCTGGTGCGACATTA+GGG | + | Chr6:63273821-63273840 | None:intergenic | 45.0% | |
| TGGGGAGAATATGAGTAGTG+TGG | - | Chr6:63274719-63274738 | MsG0680033368.01.T01:CDS | 45.0% | |
| TGTAGTCAAGTCGGAAGTTG+AGG | + | Chr6:63273657-63273676 | None:intergenic | 45.0% | |
| TGTGTCGTGTGCTTGGAAAA+GGG | - | Chr6:63274392-63274411 | MsG0680033368.01.T01:CDS | 45.0% | |
| TTGCGGTTATGCATGAGGAT+GGG | - | Chr6:63274652-63274671 | MsG0680033368.01.T01:CDS | 45.0% | |
| TTGTGTCGTGTGCTTGGAAA+AGG | - | Chr6:63274391-63274410 | MsG0680033368.01.T01:CDS | 45.0% | |
| ! | CGGTTCAACCAGTTTTCTTG+TGG | - | Chr6:63274052-63274071 | MsG0680033368.01.T01:CDS | 45.0% |
| ! | CTTAGGGCTTGGAGTCTTTT+TGG | + | Chr6:63273776-63273795 | None:intergenic | 45.0% |
| ! | TAACGGATGGAGCTATCCAT+GGG | - | Chr6:63274095-63274114 | MsG0680033368.01.T01:CDS | 45.0% |
| ! | TAGGGCTTGGAGTCTTTTTG+GGG | + | Chr6:63273774-63273793 | None:intergenic | 45.0% |
| ! | TCTCATTGATTGGTCGGTAC+CGG | - | Chr6:63274032-63274051 | MsG0680033368.01.T01:CDS | 45.0% |
| ! | TGGAATGACGGAGGTAATTG+GGG | - | Chr6:63274365-63274384 | MsG0680033368.01.T01:CDS | 45.0% |
| ! | TGTTTTGTACATGCATCCCG+CGG | - | Chr6:63274752-63274771 | MsG0680033368.01.T01:CDS | 45.0% |
| !! | GGAATAAGGAAAGAGCGTTG+AGG | + | Chr6:63273753-63273772 | None:intergenic | 45.0% |
| !! | GGAGAAAGTGTTAAGCACGA+TGG | - | Chr6:63274513-63274532 | MsG0680033368.01.T01:CDS | 45.0% |
| !! | TTAGAGGTGTCGAGTTTGCT+TGG | + | Chr6:63273399-63273418 | None:intergenic | 45.0% |
| !! | TTTTGGAGACGACGTTGTTC+CGG | + | Chr6:63273965-63273984 | None:intergenic | 45.0% |
| !!! | CGGTTCATGTTTTGACAGGA+GGG | - | Chr6:63274277-63274296 | MsG0680033368.01.T01:CDS | 45.0% |
| AACGGATGGAGCTATCCATG+GGG | - | Chr6:63274096-63274115 | MsG0680033368.01.T01:CDS | 50.0% | |
| AACTGAAGCTCGTACATGGC+CGG | + | Chr6:63273601-63273620 | None:intergenic | 50.0% | |
| AAGAAGGTGAGTGGGGTTAG+AGG | + | Chr6:63273415-63273434 | None:intergenic | 50.0% | |
| AAGCACGATGGTGTAACGGT+TGG | - | Chr6:63274525-63274544 | MsG0680033368.01.T01:CDS | 50.0% | |
| ACTGTAGATCGTTGGCGCAT+CGG | + | Chr6:63274163-63274182 | None:intergenic | 50.0% | |
| ATGGAGCTATCCATGGGGAA+TGG | - | Chr6:63274101-63274120 | MsG0680033368.01.T01:CDS | 50.0% | |
| CAGTTCTCCGTTCCAATGTC+CGG | - | Chr6:63273616-63273635 | MsG0680033368.01.T01:CDS | 50.0% | |
| CCATGATGAGGACGAGCTTA+GGG | + | Chr6:63273792-63273811 | None:intergenic | 50.0% | |
| CGTGTGCTTGGAAAAGGGAA+TGG | - | Chr6:63274397-63274416 | MsG0680033368.01.T01:CDS | 50.0% | |
| CTCACACGAGCAGAGAAGTT+AGG | - | Chr6:63274321-63274340 | MsG0680033368.01.T01:CDS | 50.0% | |
| GACAGAGCAGCCATTGTCTA+TGG | - | Chr6:63273436-63273455 | MsG0680033368.01.T01:CDS | 50.0% | |
| GCAGATATTCGTTCCTCCGA+CGG | + | Chr6:63274130-63274149 | None:intergenic | 50.0% | |
| GCTCTGTCTAAGAAGGTGAG+TGG | + | Chr6:63273424-63273443 | None:intergenic | 50.0% | |
| GGAACAACGTCGTCTCCAAA+AGG | - | Chr6:63273964-63273983 | MsG0680033368.01.T01:CDS | 50.0% | |
| GGAGAACTGAAGCTCGTACA+TGG | + | Chr6:63273605-63273624 | None:intergenic | 50.0% | |
| GTGCTTAACACTTTCTCCGG+TGG | + | Chr6:63274511-63274530 | None:intergenic | 50.0% | |
| GTGGAATCTGGTGCGACATT+AGG | + | Chr6:63273822-63273841 | None:intergenic | 50.0% | |
| GTTGCGGTTATGCATGAGGA+TGG | - | Chr6:63274651-63274670 | MsG0680033368.01.T01:CDS | 50.0% | |
| TCCATGATGAGGACGAGCTT+AGG | + | Chr6:63273793-63273812 | None:intergenic | 50.0% | |
| TTCACTGTGGATGAGCAGCA+CGG | + | Chr6:63273689-63273708 | None:intergenic | 50.0% | |
| ! | AGCGTTGAGGGCAAGAGAAA+GGG | + | Chr6:63273740-63273759 | None:intergenic | 50.0% |
| ! | CTAACGGATGGAGCTATCCA+TGG | - | Chr6:63274094-63274113 | MsG0680033368.01.T01:CDS | 50.0% |
| ! | TACGAGGGTCTTGTAGCGAA+GGG | - | Chr6:63273874-63273893 | MsG0680033368.01.T01:CDS | 50.0% |
| ! | TCTTCCCTCGGCATCGAAAA+AGG | - | Chr6:63273544-63273563 | MsG0680033368.01.T01:CDS | 50.0% |
| !! | AGGTGTGATGGAGGTTGATG+TGG | - | Chr6:63274479-63274498 | MsG0680033368.01.T01:CDS | 50.0% |
| !! | GTGATGGAGGTTGATGTGGT+GGG | - | Chr6:63274483-63274502 | MsG0680033368.01.T01:CDS | 50.0% |
| !! | TGTGATGGAGGTTGATGTGG+TGG | - | Chr6:63274482-63274501 | MsG0680033368.01.T01:CDS | 50.0% |
| !!! | CCGGTTCATGTTTTGACAGG+AGG | - | Chr6:63274276-63274295 | MsG0680033368.01.T01:CDS | 50.0% |
| ATGAGGACGAGCTTAGGGCT+TGG | + | Chr6:63273787-63273806 | None:intergenic | 55.0% | |
| CAGCGTAATCGGATCCCACT+CGG | + | Chr6:63273932-63273951 | None:intergenic | 55.0% | |
| CCCTAAGCTCGTCCTCATCA+TGG | - | Chr6:63273789-63273808 | MsG0680033368.01.T01:CDS | 55.0% | |
| CTTCGCTACAAGACCCTCGT+AGG | + | Chr6:63273875-63273894 | None:intergenic | 55.0% | |
| GAGGTTGTTGAGAATGGCGC+CGG | + | Chr6:63273638-63273657 | None:intergenic | 55.0% | |
| GGGTGATTGTGTCGTGTGCT+TGG | - | Chr6:63274385-63274404 | MsG0680033368.01.T01:CDS | 55.0% | |
| GTACATGCATCCCGCGGTTA+AGG | - | Chr6:63274758-63274777 | MsG0680033368.01.T01:CDS | 55.0% | |
| TGTGAGGAGGGTAGGTGTGA+TGG | - | Chr6:63274467-63274486 | MsG0680033368.01.T01:CDS | 55.0% | |
| ! | AATGGCGCCGGACATTGGAA+CGG | + | Chr6:63273626-63273645 | None:intergenic | 55.0% |
| ! | CTACGAGGGTCTTGTAGCGA+AGG | - | Chr6:63273873-63273892 | MsG0680033368.01.T01:CDS | 55.0% |
| ! | GCGAGGCCGGATGATTTTTG+GGG | - | Chr6:63274795-63274814 | MsG0680033368.01.T01:CDS | 55.0% |
| ! | GGCGAGGCCGGATGATTTTT+GGG | - | Chr6:63274794-63274813 | MsG0680033368.01.T01:CDS | 55.0% |
| ! | TCGTACATGGCCGGAGTGTT+GGG | + | Chr6:63273592-63273611 | None:intergenic | 55.0% |
| ! | TGGCGAGGCCGGATGATTTT+TGG | - | Chr6:63274793-63274812 | MsG0680033368.01.T01:CDS | 55.0% |
| ! | TTGAGAATGGCGCCGGACAT+TGG | + | Chr6:63273631-63273650 | None:intergenic | 55.0% |
| !! | AATCGGATCCCACTCGGTGT+CGG | + | Chr6:63273926-63273945 | None:intergenic | 55.0% |
| !! | GAGCGTTGAGGGCAAGAGAA+AGG | + | Chr6:63273741-63273760 | None:intergenic | 55.0% |
| !!! | GTCGCCTTTTTCGATGCCGA+GGG | + | Chr6:63273551-63273570 | None:intergenic | 55.0% |
| AGGCAAGGTGTGAGGAGGGT+AGG | - | Chr6:63274459-63274478 | MsG0680033368.01.T01:CDS | 60.0% | |
| CATGCATCCCGCGGTTAAGG+AGG | - | Chr6:63274761-63274780 | MsG0680033368.01.T01:CDS | 60.0% | |
| CGTCCTCTCTCCCAACACTC+CGG | - | Chr6:63273579-63273598 | MsG0680033368.01.T01:CDS | 60.0% | |
| CGTGTGAGAATCGCTGCTGG+TGG | + | Chr6:63274309-63274328 | None:intergenic | 60.0% | |
| CTCGTACATGGCCGGAGTGT+TGG | + | Chr6:63273593-63273612 | None:intergenic | 60.0% | |
| GACAGGGAAGGCGAGGATGA+AGG | - | Chr6:63274434-63274453 | MsG0680033368.01.T01:CDS | 60.0% | |
| GAGGAGGGTAGGTGTGATGG+AGG | - | Chr6:63274470-63274489 | MsG0680033368.01.T01:CDS | 60.0% | |
| GCTCGTGTGAGAATCGCTGC+TGG | + | Chr6:63274312-63274331 | None:intergenic | 60.0% | |
| GGGATAGGTTTCCGGCGACA+GGG | - | Chr6:63274418-63274437 | MsG0680033368.01.T01:CDS | 60.0% | |
| GTGGATGAGCAGCACGGAGA+GGG | + | Chr6:63273683-63273702 | None:intergenic | 60.0% | |
| TAGGTTTCCGGCGACAGGGA+AGG | - | Chr6:63274422-63274441 | MsG0680033368.01.T01:CDS | 60.0% | |
| TGAAGGCGAGGCAAGGTGTG+AGG | - | Chr6:63274451-63274470 | MsG0680033368.01.T01:CDS | 60.0% | |
| TGGAGACGACGTTGTTCCGG+AGG | + | Chr6:63273962-63273981 | None:intergenic | 60.0% | |
| TGGGATAGGTTTCCGGCGAC+AGG | - | Chr6:63274417-63274436 | MsG0680033368.01.T01:CDS | 60.0% | |
| TGTGGATGAGCAGCACGGAG+AGG | + | Chr6:63273684-63273703 | None:intergenic | 60.0% | |
| ! | GTTGATGTGGTGGGACCCAC+CGG | - | Chr6:63274492-63274511 | MsG0680033368.01.T01:CDS | 60.0% |
| !! | ATCGGATCCCACTCGGTGTC+GGG | + | Chr6:63273925-63273944 | None:intergenic | 60.0% |
| !! | CGGAGTGTTGGGAGAGAGGA+CGG | + | Chr6:63273581-63273600 | None:intergenic | 60.0% |
| !!! | CGTCGCCTTTTTCGATGCCG+AGG | + | Chr6:63273552-63273571 | None:intergenic | 60.0% |
| AGGCGAGGCAAGGTGTGAGG+AGG | - | Chr6:63274454-63274473 | MsG0680033368.01.T01:CDS | 65.0% | |
| ATCCTCGCCTTCCCTGTCGC+CGG | + | Chr6:63274432-63274451 | None:intergenic | 65.0% | |
| CCATGGGGAATGGCTGCCGT+CGG | - | Chr6:63274111-63274130 | MsG0680033368.01.T01:CDS | 65.0% | |
| GATCCGTCCCGACACCGAGT+GGG | - | Chr6:63273915-63273934 | MsG0680033368.01.T01:CDS | 65.0% | |
| GCATCCCGCGGTTAAGGAGG+CGG | - | Chr6:63274764-63274783 | MsG0680033368.01.T01:CDS | 65.0% | |
| GCGAGGATGAAGGCGAGGCA+AGG | - | Chr6:63274444-63274463 | MsG0680033368.01.T01:CDS | 65.0% | |
| GGAAGGCGAGGATGAAGGCG+AGG | - | Chr6:63274439-63274458 | MsG0680033368.01.T01:CDS | 65.0% | |
| GGCGAGGCAAGGTGTGAGGA+GGG | - | Chr6:63274455-63274474 | MsG0680033368.01.T01:CDS | 65.0% | |
| !! | GATCCCACTCGGTGTCGGGA+CGG | + | Chr6:63273921-63273940 | None:intergenic | 65.0% |
| !! | TGGCCGGAGTGTTGGGAGAG+AGG | + | Chr6:63273585-63273604 | None:intergenic | 65.0% |
| ACCGCCGCCTCCTTAACCGC+GGG | + | Chr6:63274771-63274790 | None:intergenic | 70.0% | |
| CACCGCCGCCTCCTTAACCG+CGG | + | Chr6:63274772-63274791 | None:intergenic | 70.0% | |
| CCGACGGCAGCCATTCCCCA+TGG | + | Chr6:63274114-63274133 | None:intergenic | 70.0% | |
| GGATCCGTCCCGACACCGAG+TGG | - | Chr6:63273914-63273933 | MsG0680033368.01.T01:CDS | 70.0% | |
| GGTTAAGGAGGCGGCGGTGG+TGG | - | Chr6:63274773-63274792 | MsG0680033368.01.T01:CDS | 70.0% | |
| TCCCGCGGTTAAGGAGGCGG+CGG | - | Chr6:63274767-63274786 | MsG0680033368.01.T01:CDS | 70.0% | |
| TGGGGAATGGCTGCCGTCGG+AGG | - | Chr6:63274114-63274133 | MsG0680033368.01.T01:CDS | 70.0% | |
| TTCCGGCGACAGGGAAGGCG+AGG | - | Chr6:63274427-63274446 | MsG0680033368.01.T01:CDS | 70.0% | |
| CGCGGTTAAGGAGGCGGCGG+TGG | - | Chr6:63274770-63274789 | MsG0680033368.01.T01:CDS | 75.0% | |
| !! | AGGAGGCGGCGGTGGTGGCG+AGG | - | Chr6:63274778-63274797 | MsG0680033368.01.T01:CDS | 80.0% |
| !! | GGCGGCGGTGGTGGCGAGGC+CGG | - | Chr6:63274782-63274801 | MsG0680033368.01.T01:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 63273376 | 63274923 | 63273376 | ID=MsG0680033368.01;Name=MsG0680033368.01 |
| Chr6 | mRNA | 63273376 | 63274923 | 63273376 | ID=MsG0680033368.01.T01;Parent=MsG0680033368.01;Name=MsG0680033368.01.T01;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|515 |
| Chr6 | exon | 63273376 | 63274923 | 63273376 | ID=MsG0680033368.01.T01:exon:4118;Parent=MsG0680033368.01.T01 |
| Chr6 | CDS | 63273376 | 63274923 | 63273376 | ID=MsG0680033368.01.T01:cds;Parent=MsG0680033368.01.T01 |
| Gene Sequence |
| Protein sequence |
