AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048509.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048509.01.T01 MTR_8g032950 93.265 490 33 0 1 490 1 490 0.0 892
MsG0080048509.01.T01 MTR_4g117960 74.385 488 124 1 4 490 3 490 0.0 743
MsG0080048509.01.T01 MTR_4g117980 66.939 490 158 2 4 490 3 491 0.0 666
MsG0080048509.01.T01 MTR_6g035265 68.443 488 145 6 4 489 3 483 0.0 656
MsG0080048509.01.T01 MTR_2g034990 67.762 487 153 3 4 487 3 488 0.0 637
MsG0080048509.01.T01 MTR_6g035185 67.480 492 154 4 4 490 3 493 0.0 636
MsG0080048509.01.T01 MTR_2g035020 68.507 489 150 2 4 489 3 490 0.0 635
MsG0080048509.01.T01 MTR_0536s0020 63.039 487 173 2 1 487 7 486 0.0 623
MsG0080048509.01.T01 MTR_7g012120 64.754 488 169 3 4 490 8 493 0.0 604
MsG0080048509.01.T01 MTR_5g067170 64.622 489 165 4 3 487 2 486 0.0 590
MsG0080048509.01.T01 MTR_5g029800 63.860 487 168 3 4 487 3 484 0.0 587
MsG0080048509.01.T01 MTR_4g118000 61.698 483 171 3 8 490 8 476 0.0 587
MsG0080048509.01.T01 MTR_4g117890 61.145 489 183 2 1 489 2 483 0.0 585
MsG0080048509.01.T01 MTR_0536s0010 56.522 483 197 3 7 489 16 485 0.0 555
MsG0080048509.01.T01 MTR_4g117950 56.133 481 199 3 7 487 1 469 0.0 537
MsG0080048509.01.T01 MTR_2g035040 68.011 372 115 3 119 487 23 393 4.92e-180 510
MsG0080048509.01.T01 MTR_4g031800 43.611 493 251 6 9 490 6 482 9.99e-138 406
MsG0080048509.01.T01 MTR_4g485630 44.468 479 246 8 11 481 8 474 9.18e-131 388
MsG0080048509.01.T01 MTR_7g070740 42.566 491 262 8 12 489 9 492 8.21e-120 360
MsG0080048509.01.T01 MTR_4g117970 52.577 388 161 7 79 459 53 424 6.83e-118 353
MsG0080048509.01.T01 MTR_7g070800 40.974 493 274 6 7 490 1 485 9.12e-117 352
MsG0080048509.01.T01 MTR_7g070660 40.854 492 267 9 11 490 10 489 1.34e-115 350
MsG0080048509.01.T01 MTR_7g055710 40.833 480 266 7 11 479 10 482 2.54e-115 349
MsG0080048509.01.T01 MTR_7g070930 41.752 491 267 7 11 489 13 496 9.71e-115 347
MsG0080048509.01.T01 MTR_7g070610 40.733 491 272 8 11 489 12 495 1.47e-114 347
MsG0080048509.01.T01 MTR_8g066610 39.673 489 265 9 10 483 7 480 1.36e-113 344
MsG0080048509.01.T01 MTR_7g070780 41.818 495 262 7 10 489 9 492 1.57e-113 344
MsG0080048509.01.T01 MTR_4g108250 40.486 494 272 8 11 489 10 496 2.91e-113 344
MsG0080048509.01.T01 MTR_7g071040 40.711 506 276 10 1 489 1 499 3.18e-113 344
MsG0080048509.01.T01 MTR_7g070810 38.866 494 276 7 9 490 6 485 1.05e-111 339
MsG0080048509.01.T01 MTR_7g070860 38.900 491 269 5 9 490 4 472 1.39e-109 333
MsG0080048509.01.T01 MTR_5g016660 38.398 487 279 8 11 484 9 487 6.42e-108 330
MsG0080048509.01.T01 MTR_7g070910 39.271 494 277 9 12 490 9 494 2.11e-106 326
MsG0080048509.01.T01 MTR_7g070940 38.900 491 277 8 9 490 6 482 1.82e-105 323
MsG0080048509.01.T01 MTR_4g485620 38.703 478 254 11 24 483 1 457 8.82e-105 321
MsG0080048509.01.T01 MTR_5g039900 37.705 488 278 8 11 484 12 487 1.82e-102 316
MsG0080048509.01.T01 MTR_4g485640 38.925 465 255 7 22 477 219 663 4.70e-102 320
MsG0080048509.01.T01 MTR_7g117405 37.996 479 275 10 14 480 12 480 2.23e-99 307
MsG0080048509.01.T01 MTR_5g045970 36.917 493 281 11 11 484 15 496 1.39e-98 306
MsG0080048509.01.T01 MTR_5g040030 35.628 494 293 9 9 487 11 494 3.52e-98 305
MsG0080048509.01.T01 MTR_4g485590 41.176 408 203 7 13 414 10 386 1.17e-97 300
MsG0080048509.01.T01 MTR_7g102450 38.008 492 269 12 14 490 11 481 3.56e-97 301
MsG0080048509.01.T01 MTR_6g035295 36.531 490 289 8 11 487 11 491 8.13e-97 301
MsG0080048509.01.T01 MTR_1g040310 38.076 499 285 11 4 489 5 492 1.45e-96 301
MsG0080048509.01.T01 MTR_7g070870 36.235 494 262 8 9 490 16 468 1.58e-96 300
MsG0080048509.01.T01 MTR_7g102560 36.456 491 276 15 12 480 7 483 6.47e-95 296
MsG0080048509.01.T01 MTR_8g044140 37.284 464 268 9 37 487 2 455 1.31e-92 289
MsG0080048509.01.T01 MTR_4g024020 36.162 495 288 14 12 486 7 493 1.68e-91 288
MsG0080048509.01.T01 MTR_1g062380 35.861 488 284 12 16 484 20 497 8.56e-91 286
MsG0080048509.01.T01 MTR_7g102550 35.052 485 287 12 14 479 9 484 4.34e-90 283
MsG0080048509.01.T01 MTR_5g045960 35.052 485 291 12 13 480 8 485 3.37e-89 281
MsG0080048509.01.T01 MTR_7g102460 33.737 495 302 12 12 488 7 493 5.38e-88 278
MsG0080048509.01.T01 MTR_7g102490 33.400 497 303 12 12 488 7 495 1.44e-86 275
MsG0080048509.01.T01 MTR_7g071050 36.543 457 244 10 11 465 12 424 3.62e-83 264
MsG0080048509.01.T01 MTR_0536s0030 71.667 180 51 0 310 489 181 360 1.66e-81 257
MsG0080048509.01.T01 MTR_0536s0030 45.304 181 92 2 39 219 7 180 3.26e-44 159
MsG0080048509.01.T01 MTR_7g102520 33.874 493 288 15 11 480 11 488 1.24e-76 249
MsG0080048509.01.T01 MTR_7g470610 41.319 288 149 6 126 411 2 271 6.68e-62 204
MsG0080048509.01.T01 MTR_7g070583 41.319 288 149 6 126 411 2 271 6.68e-62 204
MsG0080048509.01.T01 MTR_5g087620 29.817 493 303 12 17 482 15 491 5.67e-59 202
MsG0080048509.01.T01 MTR_7g039550 40.458 262 146 4 225 484 12 265 4.89e-57 191
MsG0080048509.01.T01 MTR_2g098430 28.298 470 300 10 15 466 9 459 1.89e-56 196
MsG0080048509.01.T01 MTR_8g056740 35.326 368 183 11 111 468 46 368 6.07e-56 192
MsG0080048509.01.T01 MTR_8g466240 30.567 494 270 17 17 485 13 458 1.23e-52 184
MsG0080048509.01.T01 MTR_2g059240 29.424 486 288 14 16 480 17 468 4.81e-50 178
MsG0080048509.01.T01 MTR_3g009510 30.645 496 279 18 17 478 10 474 6.87e-48 172
MsG0080048509.01.T01 MTR_0009s0240 29.675 492 287 17 13 483 8 461 8.86e-48 172
MsG0080048509.01.T01 MTR_1g029540 30.063 479 286 16 17 482 19 461 5.75e-47 169
MsG0080048509.01.T01 MTR_8g071070 29.800 500 290 19 12 483 5 471 1.34e-45 166
MsG0080048509.01.T01 MTR_7g070760 41.629 221 94 4 195 413 18 205 1.46e-45 158
MsG0080048509.01.T01 MTR_6g038240 28.138 494 285 19 16 487 15 460 5.95e-44 161
MsG0080048509.01.T01 MTR_6g488280 29.835 486 275 20 20 476 12 460 6.80e-44 161
MsG0080048509.01.T01 MTR_0428s0010 29.835 486 275 20 20 476 12 460 6.80e-44 161
MsG0080048509.01.T01 MTR_5g090630 27.586 493 291 20 15 478 8 463 3.37e-43 159
MsG0080048509.01.T01 MTR_7g070995 50.000 152 76 0 339 490 3 154 3.71e-43 150
MsG0080048509.01.T01 MTR_6g033615 34.602 289 157 7 202 487 194 453 5.17e-43 159
MsG0080048509.01.T01 MTR_8g006730 37.226 274 138 10 209 473 211 459 1.40e-42 157
MsG0080048509.01.T01 MTR_6g023665 30.000 480 276 22 20 473 19 464 3.58e-42 156
MsG0080048509.01.T01 MTR_6g033675 34.354 294 151 9 200 485 203 462 4.42e-42 156
MsG0080048509.01.T01 MTR_8g090095 30.894 369 221 11 119 482 142 481 5.26e-42 156
MsG0080048509.01.T01 MTR_8g012635 35.484 279 147 9 207 473 207 464 8.10e-42 155
MsG0080048509.01.T01 MTR_2g040530 27.767 497 292 18 15 482 8 466 8.46e-42 155
MsG0080048509.01.T01 MTR_4g008630 35.039 254 147 7 230 482 228 464 1.14e-41 155
MsG0080048509.01.T01 MTR_8g012630 40.187 214 107 5 265 469 203 404 1.33e-41 154
MsG0080048509.01.T01 MTR_5g090660 26.380 489 309 16 15 478 8 470 1.37e-41 156
MsG0080048509.01.T01 MTR_0184s0040 33.579 271 155 6 209 473 222 473 1.64e-41 155
MsG0080048509.01.T01 MTR_0078s0190 33.579 271 155 6 209 473 222 473 1.64e-41 155
MsG0080048509.01.T01 MTR_6g033625 27.935 494 290 19 17 483 9 463 5.43e-41 153
MsG0080048509.01.T01 MTR_6g038220 27.292 480 281 17 15 473 14 446 5.86e-41 153
MsG0080048509.01.T01 MTR_5g090580 32.362 309 184 8 179 478 180 472 1.78e-40 152
MsG0080048509.01.T01 MTR_3g049970 26.892 502 305 17 8 482 5 471 1.78e-40 152
MsG0080048509.01.T01 MTR_0184s0030 34.686 271 147 9 207 469 208 456 1.80e-40 152
MsG0080048509.01.T01 MTR_7g080950 27.292 480 292 16 16 480 10 447 2.82e-40 151
MsG0080048509.01.T01 MTR_2g035050 66.372 113 38 0 4 116 3 115 2.92e-40 142
MsG0080048509.01.T01 MTR_8g465670 26.786 504 296 18 8 477 3 467 2.99e-40 151
MsG0080048509.01.T01 MTR_8g006260 34.932 292 158 11 202 483 203 472 4.42e-40 151
MsG0080048509.01.T01 MTR_8g012650 34.432 273 146 9 209 469 209 460 4.59e-40 150
MsG0080048509.01.T01 MTR_8g009055 24.744 489 308 14 7 469 1 455 4.75e-40 150
MsG0080048509.01.T01 MTR_8g006710 27.586 493 292 16 20 483 12 468 5.57e-40 150
MsG0080048509.01.T01 MTR_8g077590 34.386 285 155 9 194 469 194 455 7.43e-40 150
MsG0080048509.01.T01 MTR_2g046820 26.489 487 309 15 15 482 8 464 7.56e-40 150
MsG0080048509.01.T01 MTR_3g479520 28.088 502 288 15 15 480 18 482 1.08e-39 150
MsG0080048509.01.T01 MTR_8g006270 34.892 278 149 10 202 469 197 452 1.39e-39 149
MsG0080048509.01.T01 MTR_4g123553 26.283 487 275 17 2 457 5 438 1.51e-39 149
MsG0080048509.01.T01 MTR_1g107350 26.190 504 306 18 8 482 4 470 1.52e-39 149
MsG0080048509.01.T01 MTR_5g090700 31.624 351 210 11 140 478 142 474 2.09e-39 149
MsG0080048509.01.T01 MTR_6g038200 28.893 488 264 21 15 473 14 447 2.72e-39 148
MsG0080048509.01.T01 MTR_1g019510 34.559 272 149 7 209 473 207 456 3.22e-39 148
MsG0080048509.01.T01 MTR_6g033660 34.507 284 157 8 202 485 207 461 3.32e-39 148
MsG0080048509.01.T01 MTR_7g080940 27.475 495 282 19 12 480 9 452 3.78e-39 148
MsG0080048509.01.T01 MTR_5g090620 27.291 491 305 17 15 478 8 473 5.57e-39 148
MsG0080048509.01.T01 MTR_8g009063 31.408 277 162 6 201 469 206 462 5.77e-39 148
MsG0080048509.01.T01 MTR_8g009050 32.979 282 161 9 200 473 198 459 1.51e-38 146
MsG0080048509.01.T01 MTR_5g090670 28.297 364 230 11 132 478 125 474 1.61e-38 146
MsG0080048509.01.T01 MTR_8g012730 38.095 210 109 4 268 468 99 296 1.71e-38 142
MsG0080048509.01.T01 MTR_8g064870 26.389 504 318 16 10 489 9 483 2.52e-38 146
MsG0080048509.01.T01 MTR_3g079480 27.800 500 288 17 17 480 26 488 2.91e-38 146
MsG0080048509.01.T01 MTR_2g008225 27.564 468 284 15 9 457 12 443 2.94e-38 145
MsG0080048509.01.T01 MTR_5g070090 32.302 291 166 10 193 480 199 461 3.57e-38 145
MsG0080048509.01.T01 MTR_1g032490 27.701 509 298 19 8 484 4 474 4.27e-38 145
MsG0080048509.01.T01 MTR_7g080900 25.296 506 301 18 1 480 1 455 5.02e-38 145
MsG0080048509.01.T01 MTR_5g098930 30.282 284 181 8 201 478 193 465 5.03e-38 145
MsG0080048509.01.T01 MTR_3g069710 28.656 506 296 17 1 488 1 459 5.79e-38 144
MsG0080048509.01.T01 MTR_6g033725 32.986 288 156 8 202 485 205 459 9.69e-38 144
MsG0080048509.01.T01 MTR_2g008210 27.237 514 302 19 1 480 1 476 1.32e-37 144
MsG0080048509.01.T01 MTR_7g067120 25.991 454 282 14 8 457 3 406 1.40e-37 143
MsG0080048509.01.T01 MTR_7g067330 26.609 466 276 16 8 461 3 414 2.09e-37 142
MsG0080048509.01.T01 MTR_8g008990 32.500 280 159 9 200 469 198 457 2.48e-37 143
MsG0080048509.01.T01 MTR_8g012745 33.099 284 164 9 207 483 207 471 2.64e-37 143
MsG0080048509.01.T01 MTR_1g107380 27.717 368 237 7 121 480 126 472 2.77e-37 143
MsG0080048509.01.T01 MTR_8g009067 31.802 283 167 7 201 477 81 343 6.28e-37 139
MsG0080048509.01.T01 MTR_8g009067 31.802 283 167 7 201 477 199 461 7.35e-37 142
MsG0080048509.01.T01 MTR_7g080935 26.518 494 278 20 16 480 15 452 1.46e-36 140
MsG0080048509.01.T01 MTR_8g088560 27.310 487 295 17 15 482 13 459 2.91e-36 140
MsG0080048509.01.T01 MTR_6g038300 27.545 501 296 22 1 480 1 455 3.21e-36 140
MsG0080048509.01.T01 MTR_0078s0010 31.802 283 165 8 209 483 207 469 3.86e-36 140
MsG0080048509.01.T01 MTR_3g435310 24.615 455 265 13 9 457 15 397 3.98e-36 139
MsG0080048509.01.T01 MTR_7g046490 32.872 289 162 10 193 473 192 456 4.49e-36 139
MsG0080048509.01.T01 MTR_6g038230 27.708 480 280 18 15 473 14 447 5.45e-36 139
MsG0080048509.01.T01 MTR_8g009073 31.387 274 162 7 201 468 199 452 5.46e-36 139
MsG0080048509.01.T01 MTR_8g009073 31.387 274 162 7 201 468 70 323 5.75e-36 136
MsG0080048509.01.T01 MTR_2g008220 26.981 467 288 14 9 457 11 442 6.64e-36 139
MsG0080048509.01.T01 MTR_3g084530 35.458 251 139 5 238 480 237 472 9.76e-36 139
MsG0080048509.01.T01 MTR_1g019520 34.513 226 130 4 264 483 2 215 1.21e-35 132
MsG0080048509.01.T01 MTR_3g084520 35.586 222 131 3 259 480 263 472 1.25e-35 138
MsG0080048509.01.T01 MTR_7g117170 30.686 277 164 7 205 473 212 468 1.29e-35 138
MsG0080048509.01.T01 MTR_8g006220 26.070 514 298 19 7 477 1 475 1.30e-35 138
MsG0080048509.01.T01 MTR_2g046750 26.337 486 300 18 22 482 15 467 1.38e-35 138
MsG0080048509.01.T01 MTR_1g107285 24.206 504 311 15 8 482 4 465 2.24e-35 137
MsG0080048509.01.T01 MTR_0078s0060 33.210 271 156 8 209 473 207 458 2.85e-35 137
MsG0080048509.01.T01 MTR_7g047030 31.095 283 167 8 209 483 207 469 3.03e-35 137
MsG0080048509.01.T01 MTR_7g047270 31.095 283 167 8 209 483 207 469 3.03e-35 137
MsG0080048509.01.T01 MTR_8g007565 25.855 468 295 15 8 454 3 439 3.89e-35 137
MsG0080048509.01.T01 MTR_8g008970 31.690 284 168 7 196 473 194 457 4.26e-35 139
MsG0080048509.01.T01 MTR_8g008970 28.399 331 197 8 140 469 486 777 1.25e-31 129
MsG0080048509.01.T01 MTR_0891s0010 31.290 310 177 8 177 480 10 289 4.73e-35 133
MsG0080048509.01.T01 MTR_8g007650 25.855 468 295 15 8 454 3 439 7.09e-35 136
MsG0080048509.01.T01 MTR_8g027885 26.721 494 284 19 8 469 14 461 8.65e-35 136
MsG0080048509.01.T01 MTR_3g479490 26.378 508 301 18 12 482 4 475 1.17e-34 135
MsG0080048509.01.T01 MTR_5g035580 26.033 484 292 19 16 480 17 453 1.38e-34 135
MsG0080048509.01.T01 MTR_1g107375 24.498 498 307 14 8 482 4 455 1.73e-34 135
MsG0080048509.01.T01 MTR_3g069690 26.923 494 278 19 12 477 8 446 1.75e-34 135
MsG0080048509.01.T01 MTR_5g090600 27.616 344 214 9 140 478 138 451 2.04e-34 135
MsG0080048509.01.T01 MTR_1g107315 26.419 511 302 17 5 482 1 470 3.51e-34 134
MsG0080048509.01.T01 MTR_3g479610 32.384 281 158 7 206 480 58 312 3.93e-34 131
MsG0080048509.01.T01 MTR_5g035560 25.988 481 296 17 16 480 15 451 4.34e-34 134
MsG0080048509.01.T01 MTR_1g107365 24.551 501 304 16 8 482 41 493 4.48e-34 134
MsG0080048509.01.T01 MTR_5g090610 27.157 313 203 8 178 481 165 461 4.74e-34 134
MsG0080048509.01.T01 MTR_5g070040 30.000 350 205 16 131 469 135 455 5.25e-34 134
MsG0080048509.01.T01 MTR_3g084540 34.361 227 136 3 255 480 259 473 5.57e-34 134
MsG0080048509.01.T01 MTR_8g068340 26.877 413 258 12 8 399 8 397 1.59e-33 132
MsG0080048509.01.T01 MTR_4g094220 32.394 284 156 8 207 481 223 479 1.92e-33 132
MsG0080048509.01.T01 MTR_6g005600 36.842 228 124 6 264 483 255 470 2.21e-33 132
MsG0080048509.01.T01 MTR_4g082820 25.101 494 290 15 22 481 17 464 3.14e-33 131
MsG0080048509.01.T01 MTR_8g027870 32.353 272 154 9 205 469 213 461 5.46e-33 131
MsG0080048509.01.T01 MTR_5g016480 36.406 217 119 6 265 480 272 470 7.18e-33 130
MsG0080048509.01.T01 MTR_4g094920 26.316 494 314 16 5 480 18 479 8.83e-33 130
MsG0080048509.01.T01 MTR_8g074550 32.550 298 150 11 206 473 205 481 9.11e-33 131
MsG0080048509.01.T01 MTR_3g009490 40.513 195 97 5 292 478 3 186 1.04e-32 123
MsG0080048509.01.T01 MTR_5g066410 26.078 464 270 15 15 454 1 415 1.33e-32 129
MsG0080048509.01.T01 MTR_8g083280 34.685 222 116 4 262 480 266 461 1.46e-32 129
MsG0080048509.01.T01 MTR_4g064987 27.366 486 278 19 12 473 8 442 1.57e-32 129
MsG0080048509.01.T01 MTR_8g083290 26.775 493 304 14 10 478 2 461 1.69e-32 129
MsG0080048509.01.T01 MTR_5g027210 32.420 219 123 6 250 458 258 461 2.27e-32 129
MsG0080048509.01.T01 MTR_8g068360 27.010 485 304 14 8 474 8 460 3.13e-32 129
MsG0080048509.01.T01 MTR_8g068330 24.816 407 274 11 8 399 4 393 3.26e-32 129
MsG0080048509.01.T01 MTR_5g019580 25.800 500 312 19 12 479 5 477 3.42e-32 129
MsG0080048509.01.T01 MTR_5g464810 26.892 502 290 20 16 480 16 477 3.44e-32 129
MsG0080048509.01.T01 MTR_5g064240 26.892 502 290 20 16 480 16 477 3.44e-32 129
MsG0080048509.01.T01 MTR_0036s0220 27.435 503 286 24 16 480 16 477 5.57e-32 128
MsG0080048509.01.T01 MTR_2g008226 25.155 485 291 18 9 461 7 451 5.98e-32 128
MsG0080048509.01.T01 MTR_2g046620 27.021 470 285 16 6 457 10 439 8.00e-32 127
MsG0080048509.01.T01 MTR_4g064987 27.572 486 271 20 12 473 8 436 8.25e-32 127
MsG0080048509.01.T01 MTR_1g090270 26.180 466 276 17 11 451 14 436 8.27e-32 127
MsG0080048509.01.T01 MTR_6g036650 28.125 448 242 17 3 413 9 413 1.27e-31 127
MsG0080048509.01.T01 MTR_7g011470 25.873 487 288 19 15 473 13 454 2.06e-31 126
MsG0080048509.01.T01 MTR_5g098960 26.850 473 264 22 5 451 1 417 2.29e-31 126
MsG0080048509.01.T01 MTR_7g011470 30.216 278 159 8 202 473 210 458 2.36e-31 126
MsG0080048509.01.T01 MTR_4g095008 33.921 227 134 6 265 490 263 474 2.84e-31 127
MsG0080048509.01.T01 MTR_3g479470 24.517 518 281 14 16 479 17 478 3.30e-31 126
MsG0080048509.01.T01 MTR_6g013900 27.249 389 220 13 121 480 124 478 5.33e-31 125
MsG0080048509.01.T01 MTR_5g019580 33.778 225 126 6 266 479 289 501 5.37e-31 125
MsG0080048509.01.T01 MTR_6g013920 26.289 388 225 12 121 480 124 478 6.18e-31 125
MsG0080048509.01.T01 MTR_8g064880 26.728 434 268 13 8 413 5 416 7.64e-31 125
MsG0080048509.01.T01 MTR_6g014040 24.200 500 299 17 15 473 13 473 1.47e-30 124
MsG0080048509.01.T01 MTR_5g072860 23.395 483 313 15 16 480 22 465 1.48e-30 124
MsG0080048509.01.T01 MTR_6g013960 24.242 495 300 16 17 473 15 472 1.54e-30 124
MsG0080048509.01.T01 MTR_2g014900 25.828 453 278 15 17 450 12 425 1.58e-30 124
MsG0080048509.01.T01 MTR_5g031860 34.101 217 118 5 265 481 279 470 2.74e-30 123
MsG0080048509.01.T01 MTR_8g007585 24.528 477 251 15 15 480 13 391 4.04e-30 121
MsG0080048509.01.T01 MTR_1g107360 23.838 495 321 14 8 482 5 463 4.17e-30 122
MsG0080048509.01.T01 MTR_6g014187 24.213 508 298 18 17 480 15 479 4.52e-30 122
MsG0080048509.01.T01 MTR_3g031450 23.480 477 306 13 16 480 22 451 5.58e-30 122
MsG0080048509.01.T01 MTR_5g031830 33.032 221 115 5 265 481 280 471 6.63e-30 122
MsG0080048509.01.T01 MTR_6g042310 26.013 469 285 16 9 457 15 441 7.18e-30 122
MsG0080048509.01.T01 MTR_6g014170 25.510 490 286 16 15 473 13 454 8.21e-30 122
MsG0080048509.01.T01 MTR_6g014310 27.483 302 185 8 185 480 207 480 1.94e-29 121
MsG0080048509.01.T01 MTR_6g014200 33.803 213 112 5 264 473 283 469 3.99e-29 120
MsG0080048509.01.T01 MTR_6g014290 28.053 303 183 9 185 480 203 477 5.58e-29 119
MsG0080048509.01.T01 MTR_5g031840 30.556 288 165 10 199 481 205 462 6.81e-29 119
MsG0080048509.01.T01 MTR_6g014220 29.537 281 164 8 206 480 225 477 7.71e-29 119
MsG0080048509.01.T01 MTR_3g008010 23.611 504 308 17 15 480 13 477 8.99e-29 119
MsG0080048509.01.T01 MTR_6g013990 31.818 220 121 5 264 480 284 477 1.28e-28 118
MsG0080048509.01.T01 MTR_5g464760 27.255 499 280 20 16 473 16 472 1.35e-28 118
MsG0080048509.01.T01 MTR_4g077960 28.362 409 246 14 22 413 2 380 1.49e-28 118
MsG0080048509.01.T01 MTR_6g014050 33.641 217 121 5 264 480 287 480 1.62e-28 118
MsG0080048509.01.T01 MTR_6g014020 24.260 507 289 20 15 473 13 472 2.79e-28 117
MsG0080048509.01.T01 MTR_5g072820 25.157 477 303 15 16 480 14 448 3.15e-28 117
MsG0080048509.01.T01 MTR_6g014190 30.531 226 128 5 264 486 93 292 3.44e-28 114
MsG0080048509.01.T01 MTR_5g058320 28.472 288 171 8 192 473 199 457 3.88e-28 117
MsG0080048509.01.T01 MTR_6g013450 23.848 499 302 17 15 473 13 473 4.31e-28 117
MsG0080048509.01.T01 MTR_7g013260 25.208 480 287 18 14 473 6 433 4.43e-28 116
MsG0080048509.01.T01 MTR_4g079270 25.983 458 286 16 10 450 6 427 4.90e-28 116
MsG0080048509.01.T01 MTR_6g014250 23.679 511 285 17 15 473 13 470 4.93e-28 117
MsG0080048509.01.T01 MTR_7g013240 32.857 210 114 6 265 473 249 432 2.14e-27 114
MsG0080048509.01.T01 MTR_4g128690 36.073 219 114 7 259 477 257 449 2.37e-27 114
MsG0080048509.01.T01 MTR_4g082810 26.683 416 234 12 22 401 17 397 2.96e-27 114
MsG0080048509.01.T01 MTR_5g004940 32.420 219 114 7 264 482 195 379 3.19e-27 113
MsG0080048509.01.T01 MTR_4g128720 34.703 219 117 6 259 477 260 452 4.49e-27 114
MsG0080048509.01.T01 MTR_3g031400 23.750 480 299 17 16 480 22 449 5.38e-27 114
MsG0080048509.01.T01 MTR_6g014270 31.818 220 121 5 264 480 285 478 5.76e-27 114
MsG0080048509.01.T01 MTR_7g013200 24.845 483 295 18 14 478 5 437 6.65e-27 113
MsG0080048509.01.T01 MTR_0288s0020 24.600 500 275 20 16 473 14 453 7.79e-27 113
MsG0080048509.01.T01 MTR_7g013220 30.698 215 122 5 265 478 260 448 1.58e-26 112
MsG0080048509.01.T01 MTR_6g014150 31.222 221 123 5 263 480 282 476 1.66e-26 112
MsG0080048509.01.T01 MTR_4g079250 25.546 458 288 14 10 450 6 427 2.85e-26 111
MsG0080048509.01.T01 MTR_6g013440 23.553 501 300 17 15 473 14 473 2.88e-26 112
MsG0080048509.01.T01 MTR_5g072810 28.826 281 171 7 201 480 201 453 3.74e-26 111
MsG0080048509.01.T01 MTR_6g011340 32.273 220 120 5 264 480 286 479 7.23e-26 110
MsG0080048509.01.T01 MTR_0477s0010 30.047 213 120 5 264 473 123 309 7.63e-26 108
MsG0080048509.01.T01 MTR_8g059425 26.241 282 181 7 194 473 214 470 1.03e-25 110
MsG0080048509.01.T01 MTR_5g072840 27.915 283 171 7 201 480 196 448 1.78e-25 109
MsG0080048509.01.T01 MTR_5g072830 28.622 283 169 7 201 480 196 448 6.45e-25 107
MsG0080048509.01.T01 MTR_8g043470 31.050 219 122 5 258 473 178 370 6.96e-25 106
MsG0080048509.01.T01 MTR_6g078320 26.316 494 284 17 15 468 14 467 8.33e-25 107
MsG0080048509.01.T01 MTR_7g013180 24.313 473 310 14 14 474 5 441 1.56e-23 103
MsG0080048509.01.T01 MTR_8g009840 33.854 192 102 6 288 469 338 514 2.49e-23 103
MsG0080048509.01.T01 MTR_5g075440 27.431 288 173 9 201 483 202 458 8.90e-23 101
MsG0080048509.01.T01 MTR_6g014240 30.047 213 120 5 264 473 253 439 1.36e-22 100
MsG0080048509.01.T01 MTR_2086s0010 31.606 193 110 4 288 480 1 171 3.90e-22 94.0
MsG0080048509.01.T01 MTR_1996s0010 31.606 193 110 4 288 480 1 171 3.90e-22 94.0
MsG0080048509.01.T01 MTR_4g059370 34.783 184 106 6 268 449 190 361 5.73e-22 98.2
MsG0080048509.01.T01 MTR_6g014300 27.899 276 152 9 202 473 226 458 6.90e-22 98.6
MsG0080048509.01.T01 MTR_7g470590 40.870 115 65 2 11 122 10 124 8.29e-22 91.3
MsG0080048509.01.T01 MTR_7g070570 40.870 115 65 2 11 122 10 124 8.29e-22 91.3
MsG0080048509.01.T01 MTR_2g083380 24.576 472 284 18 6 449 17 444 8.34e-20 92.4
MsG0080048509.01.T01 MTR_7g080960 25.403 248 108 6 238 480 295 470 1.91e-19 91.3
MsG0080048509.01.T01 MTR_2g083490 23.769 467 292 18 7 449 1 427 2.82e-19 90.9
MsG0080048509.01.T01 MTR_7g039570 29.048 210 133 4 11 207 13 219 4.42e-19 87.0
MsG0080048509.01.T01 MTR_2g083430 23.932 468 304 19 5 455 1 433 1.39e-18 88.6
MsG0080048509.01.T01 MTR_5g090690 30.804 224 118 7 262 479 187 379 4.47e-18 86.3
MsG0080048509.01.T01 MTR_1g090280 33.929 168 93 6 286 449 131 284 1.56e-17 84.0
MsG0080048509.01.T01 MTR_1g107325 30.597 134 85 2 349 482 229 354 5.77e-17 82.8
MsG0080048509.01.T01 MTR_5g066390 30.882 136 80 2 345 480 93 214 1.25e-16 79.3
MsG0080048509.01.T01 MTR_6g014000 33.333 129 72 2 345 473 34 148 1.67e-16 82.4
MsG0080048509.01.T01 MTR_5g072850 26.014 296 166 9 187 480 137 381 3.26e-16 80.9
MsG0080048509.01.T01 MTR_8g056710 28.319 226 108 8 137 362 28 199 4.44e-16 77.4
MsG0080048509.01.T01 MTR_2g083480 23.913 460 292 20 10 449 6 427 1.22e-15 79.3
MsG0080048509.01.T01 MTR_6g014185 33.088 136 76 3 346 480 223 344 2.50e-14 74.7
MsG0080048509.01.T01 MTR_2g083420 22.004 459 278 18 10 449 6 403 3.32e-14 75.1
MsG0080048509.01.T01 MTR_2g083390 21.663 457 283 17 10 450 6 403 2.84e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048509.01.T01 AT2G15490 39.419 482 262 9 15 480 10 477 4.69e-114 345
MsG0080048509.01.T01 AT2G15490 39.212 482 266 9 15 480 10 480 1.13e-112 342
MsG0080048509.01.T01 AT2G15480 37.325 501 272 11 7 480 5 490 1.97e-111 339
MsG0080048509.01.T01 AT2G15480 37.602 492 273 11 7 480 5 480 3.93e-111 338
MsG0080048509.01.T01 AT4G34138 39.357 498 259 15 12 487 9 485 3.59e-110 335
MsG0080048509.01.T01 AT4G34131 39.676 494 255 13 9 480 7 479 1.14e-108 331
MsG0080048509.01.T01 AT2G36770 39.506 486 266 11 13 480 13 488 5.49e-107 327
MsG0080048509.01.T01 AT2G36780 38.211 492 280 10 13 488 13 496 2.18e-105 323
MsG0080048509.01.T01 AT4G34135 37.500 488 275 10 9 480 8 481 4.87e-102 314
MsG0080048509.01.T01 AT2G36800 37.832 489 281 11 10 483 10 490 4.29e-100 310
MsG0080048509.01.T01 AT2G36750 37.449 494 285 12 9 487 6 490 5.16e-100 309
MsG0080048509.01.T01 AT2G36790 37.602 492 279 12 10 483 9 490 2.29e-99 308
MsG0080048509.01.T01 AT2G36760 36.162 495 290 11 10 488 12 496 1.39e-98 306
MsG0080048509.01.T01 AT3G53160 36.082 485 288 9 10 480 6 482 2.61e-93 292
MsG0080048509.01.T01 AT3G53150 34.570 512 291 15 1 480 10 509 3.18e-82 264
MsG0080048509.01.T01 AT5G12890 28.226 496 307 13 9 478 7 479 1.13e-56 196
MsG0080048509.01.T01 AT1G73880 30.185 487 282 20 9 473 9 459 1.47e-55 192
MsG0080048509.01.T01 AT4G34135 33.025 324 200 6 9 316 8 330 1.01e-54 187
MsG0080048509.01.T01 AT5G03490 28.715 498 284 18 9 483 16 465 2.73e-51 181
MsG0080048509.01.T01 AT1G06000 28.964 473 275 11 16 480 14 433 5.90e-51 179
MsG0080048509.01.T01 AT2G16890 28.745 494 296 18 15 485 12 472 8.03e-50 177
MsG0080048509.01.T01 AT5G14860 28.514 498 301 16 15 485 11 480 2.07e-49 177
MsG0080048509.01.T01 AT1G51210 31.533 463 254 21 11 456 17 433 3.18e-49 175
MsG0080048509.01.T01 AT1G10400 29.719 498 281 18 12 480 5 462 9.53e-49 174
MsG0080048509.01.T01 AT3G16520 35.273 275 155 8 204 478 206 457 4.56e-47 169
MsG0080048509.01.T01 AT1G22400 28.287 502 280 20 16 477 17 478 3.17e-46 168
MsG0080048509.01.T01 AT1G05680 28.810 479 283 18 13 473 7 445 3.63e-43 159
MsG0080048509.01.T01 AT3G16520 34.733 262 148 8 204 465 206 444 3.72e-43 159
MsG0080048509.01.T01 AT3G16520 34.733 262 148 8 204 465 206 444 3.91e-43 159
MsG0080048509.01.T01 AT2G16890 28.406 433 262 14 15 425 12 418 4.98e-43 158
MsG0080048509.01.T01 AT4G15280 27.364 497 308 20 11 480 3 473 3.27e-42 157
MsG0080048509.01.T01 AT4G15280 27.364 497 308 20 11 480 35 505 4.63e-42 157
MsG0080048509.01.T01 AT4G15260 29.315 365 224 11 132 480 8 354 8.19e-42 153
MsG0080048509.01.T01 AT1G22360 26.869 495 297 18 16 478 14 475 1.13e-41 155
MsG0080048509.01.T01 AT3G21760 28.657 499 310 18 11 482 3 482 2.09e-41 155
MsG0080048509.01.T01 AT1G22340 28.485 495 288 20 16 477 17 478 2.66e-41 154
MsG0080048509.01.T01 AT2G31750 28.753 473 273 19 22 473 18 447 5.17e-41 153
MsG0080048509.01.T01 AT2G29740 26.786 504 297 19 12 480 8 474 1.08e-40 152
MsG0080048509.01.T01 AT2G31750 28.481 474 273 19 22 473 18 447 1.10e-40 153
MsG0080048509.01.T01 AT5G26310 27.668 506 292 20 12 483 5 470 4.71e-40 151
MsG0080048509.01.T01 AT1G22380 26.786 504 290 17 16 480 17 480 5.19e-40 151
MsG0080048509.01.T01 AT1G05675 27.883 477 284 17 16 473 10 445 6.79e-40 150
MsG0080048509.01.T01 AT3G21800 32.056 287 169 10 205 482 208 477 4.22e-39 148
MsG0080048509.01.T01 AT3G50740 37.021 235 126 7 263 486 256 479 9.70e-39 147
MsG0080048509.01.T01 AT5G66690 32.226 301 163 9 203 486 197 473 3.65e-38 145
MsG0080048509.01.T01 AT2G18570 32.246 276 157 7 207 473 205 459 5.19e-38 145
MsG0080048509.01.T01 AT1G07260 25.306 490 315 17 15 480 9 471 1.04e-37 144
MsG0080048509.01.T01 AT1G22360 26.210 496 287 19 16 478 14 463 1.60e-37 144
MsG0080048509.01.T01 AT1G01420 27.699 491 279 20 16 473 12 459 1.72e-37 144
MsG0080048509.01.T01 AT1G01420 27.699 491 279 20 16 473 15 462 1.72e-37 144
MsG0080048509.01.T01 AT5G05870 27.510 498 287 16 8 480 6 454 2.78e-37 143
MsG0080048509.01.T01 AT3G11340 29.876 482 271 20 13 477 10 441 4.37e-37 142
MsG0080048509.01.T01 AT1G78270 27.968 497 289 21 16 478 17 478 7.17e-37 142
MsG0080048509.01.T01 AT4G01070 31.633 294 170 9 205 490 205 475 7.26e-37 142
MsG0080048509.01.T01 AT2G18560 30.000 280 166 7 204 474 112 370 8.85e-37 140
MsG0080048509.01.T01 AT1G07240 29.940 334 208 10 154 480 161 475 1.93e-36 140
MsG0080048509.01.T01 AT1G07250 27.950 483 296 20 12 469 6 461 5.93e-36 139
MsG0080048509.01.T01 AT5G05880 26.667 480 300 16 11 478 7 446 2.49e-35 137
MsG0080048509.01.T01 AT3G21750 26.139 505 299 18 11 480 3 468 4.12e-35 137
MsG0080048509.01.T01 AT2G29730 24.536 485 307 18 9 469 2 451 9.76e-35 135
MsG0080048509.01.T01 AT5G59590 27.273 484 279 21 12 473 10 442 1.06e-34 135
MsG0080048509.01.T01 AT3G46660 35.586 222 116 7 265 483 261 458 1.12e-34 135
MsG0080048509.01.T01 AT4G36770 25.720 486 288 22 11 463 1 446 1.40e-34 135
MsG0080048509.01.T01 AT1G22370 27.163 497 288 20 16 478 17 473 1.42e-34 135
MsG0080048509.01.T01 AT4G15490 27.613 507 275 18 15 480 11 466 1.95e-34 135
MsG0080048509.01.T01 AT3G21790 30.070 286 175 6 205 482 212 480 3.38e-34 135
MsG0080048509.01.T01 AT2G22590 26.374 455 300 14 12 454 13 444 5.19e-34 134
MsG0080048509.01.T01 AT5G59580 26.273 491 306 19 5 483 4 450 5.31e-34 133
MsG0080048509.01.T01 AT2G29750 30.368 326 192 12 161 480 177 473 1.67e-33 132
MsG0080048509.01.T01 AT3G46670 30.108 279 166 8 205 483 202 451 2.56e-33 131
MsG0080048509.01.T01 AT3G46700 31.408 277 162 7 205 481 197 445 2.80e-33 131
MsG0080048509.01.T01 AT2G43840 26.987 478 280 21 16 473 11 439 2.83e-33 131
MsG0080048509.01.T01 AT5G49690 27.214 463 280 15 8 453 6 428 3.25e-33 131
MsG0080048509.01.T01 AT2G31790 26.789 489 278 22 15 473 11 449 3.62e-33 131
MsG0080048509.01.T01 AT2G43840 26.778 478 281 21 16 473 11 439 7.32e-33 130
MsG0080048509.01.T01 AT5G05860 26.132 486 303 15 11 483 8 450 8.42e-33 130
MsG0080048509.01.T01 AT4G15550 27.767 497 287 19 15 479 16 472 9.02e-33 130
MsG0080048509.01.T01 AT4G15480 25.948 501 302 18 10 480 17 478 9.53e-33 130
MsG0080048509.01.T01 AT1G24100 26.069 491 294 19 16 482 15 460 2.36e-32 129
MsG0080048509.01.T01 AT5G38010 31.752 274 158 8 207 480 209 453 2.52e-32 129
MsG0080048509.01.T01 AT3G21560 25.494 506 299 17 10 480 10 472 2.82e-32 129
MsG0080048509.01.T01 AT3G46680 32.963 270 150 10 205 473 203 442 2.93e-32 128
MsG0080048509.01.T01 AT2G30150 28.337 427 243 16 79 483 54 439 2.98e-32 128
MsG0080048509.01.T01 AT3G21780 29.097 299 184 8 191 480 189 468 2.99e-32 129
MsG0080048509.01.T01 AT5G17050 31.071 280 158 7 199 478 210 454 3.36e-32 128
MsG0080048509.01.T01 AT2G30150 28.337 427 243 16 79 483 70 455 3.99e-32 128
MsG0080048509.01.T01 AT2G43820 25.470 479 286 20 16 473 11 439 5.02e-32 128
MsG0080048509.01.T01 AT5G38040 32.636 239 133 6 235 473 232 442 6.28e-32 127
MsG0080048509.01.T01 AT4G14090 25.709 494 294 19 9 479 11 454 9.04e-32 127
MsG0080048509.01.T01 AT2G29710 24.547 497 322 17 9 484 2 466 1.40e-31 127
MsG0080048509.01.T01 AT2G23260 28.375 437 254 16 67 480 53 453 2.17e-31 126
MsG0080048509.01.T01 AT5G05890 25.306 490 298 14 11 478 7 450 2.25e-31 126
MsG0080048509.01.T01 AT4G15500 26.016 492 297 21 15 480 12 462 2.97e-31 126
MsG0080048509.01.T01 AT1G22370 28.808 302 185 8 182 478 27 303 4.12e-31 122
MsG0080048509.01.T01 AT1G01390 27.708 480 274 21 22 469 35 473 4.20e-31 126
MsG0080048509.01.T01 AT1G01390 27.708 480 274 21 22 469 18 456 5.67e-31 125
MsG0080048509.01.T01 AT2G23250 26.195 481 280 18 22 480 8 435 9.24e-31 124
MsG0080048509.01.T01 AT5G17030 29.825 285 161 8 199 480 207 455 1.92e-30 123
MsG0080048509.01.T01 AT2G26480 24.473 474 317 11 9 477 5 442 2.75e-30 123
MsG0080048509.01.T01 AT1G30530 29.703 303 166 9 185 483 194 453 2.81e-30 123
MsG0080048509.01.T01 AT3G29630 26.966 445 274 16 17 451 11 414 2.97e-30 123
MsG0080048509.01.T01 AT3G46650 26.271 472 292 15 7 473 5 425 4.29e-30 122
MsG0080048509.01.T01 AT5G65550 26.395 466 275 17 12 450 7 431 5.04e-30 122
MsG0080048509.01.T01 AT2G36970 22.445 499 327 15 9 481 7 471 5.64e-30 122
MsG0080048509.01.T01 AT2G30140 25.916 382 238 10 105 473 95 444 1.11e-29 121
MsG0080048509.01.T01 AT3G46690 31.408 277 160 8 205 480 202 449 1.59e-29 120
MsG0080048509.01.T01 AT3G46720 35.945 217 111 6 265 481 253 441 1.96e-29 120
MsG0080048509.01.T01 AT2G28080 26.667 480 307 15 16 480 22 471 2.72e-29 120
MsG0080048509.01.T01 AT3G02100 24.847 491 297 16 16 481 17 460 1.26e-28 118
MsG0080048509.01.T01 AT5G05900 24.898 490 295 13 11 478 7 445 1.49e-28 118
MsG0080048509.01.T01 AT2G30140 25.916 382 237 11 105 473 95 443 2.20e-28 117
MsG0080048509.01.T01 AT5G17040 28.421 285 171 7 199 483 191 442 2.74e-28 117
MsG0080048509.01.T01 AT1G05560 29.373 303 194 7 179 480 168 451 2.97e-28 117
MsG0080048509.01.T01 AT5G17040 28.421 285 171 7 199 483 89 340 3.53e-28 115
MsG0080048509.01.T01 AT1G05560 29.373 303 194 7 179 480 218 501 3.67e-28 117
MsG0080048509.01.T01 AT3G22250 25.714 490 280 19 12 464 8 450 7.59e-28 116
MsG0080048509.01.T01 AT5G54010 27.494 451 269 19 16 451 10 417 1.02e-27 115
MsG0080048509.01.T01 AT4G27570 25.926 459 277 15 11 451 4 417 1.01e-26 112
MsG0080048509.01.T01 AT3G29630 26.292 445 251 17 17 451 11 388 3.11e-26 110
MsG0080048509.01.T01 AT1G64910 24.777 448 279 18 16 451 10 411 5.55e-26 110
MsG0080048509.01.T01 AT5G53990 26.398 447 271 18 17 451 11 411 1.07e-25 109
MsG0080048509.01.T01 AT1G05530 26.078 487 303 17 14 480 5 454 1.23e-25 109
MsG0080048509.01.T01 AT4G27560 25.701 428 250 15 11 413 4 388 1.19e-24 106
MsG0080048509.01.T01 AT3G55700 25.462 487 295 17 12 477 8 447 2.42e-24 105
MsG0080048509.01.T01 AT1G50580 26.862 443 275 15 17 451 11 412 2.56e-24 105
MsG0080048509.01.T01 AT3G55710 30.108 279 169 9 200 477 198 451 3.17e-23 102
MsG0080048509.01.T01 AT2G15490 29.412 204 132 4 15 208 10 211 5.75e-22 95.9
MsG0080048509.01.T01 AT2G15490 46.429 84 39 2 397 480 189 266 2.88e-11 64.7
MsG0080048509.01.T01 AT5G54060 23.246 456 292 14 17 451 18 436 4.68e-21 96.3
MsG0080048509.01.T01 AT1G64920 24.779 452 287 20 12 450 4 415 1.08e-20 95.1
MsG0080048509.01.T01 AT2G22930 23.371 445 284 16 17 449 11 410 2.87e-20 93.6
MsG0080048509.01.T01 AT4G09500 24.146 439 288 15 17 449 11 410 1.79e-19 91.3
MsG0080048509.01.T01 AT5G37950 30.899 178 108 6 207 384 181 343 2.60e-19 89.7
MsG0080048509.01.T01 AT5G37950 30.899 178 108 6 207 384 175 337 2.77e-19 89.7
MsG0080048509.01.T01 AT2G16890 26.367 311 193 12 15 303 12 308 1.15e-17 84.3
MsG0080048509.01.T01 AT2G16890 26.367 311 193 12 15 303 12 308 1.15e-17 84.3
MsG0080048509.01.T01 AT4G09500 23.918 439 264 17 17 449 11 385 3.01e-16 81.3

Find 133 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATGAGCGGTTTATTCTT+AGG 0.183552 contig340end:+10983 MsG0080048509.01.T01:intergenic
CATATCTTGGCCATGGTGTC+AGG 0.259979 contig340end:+11180 MsG0080048509.01.T01:intergenic
AGACGACGTGCTCAAGAGTT+TGG 0.278054 contig340end:-10109 MsG0080048509.01.T01:CDS
ACCTGGTCATATGATTCCTT+TGG 0.293652 contig340end:-11394 MsG0080048509.01.T01:CDS
CTTCTCCACGAATTCTCTAA+TGG 0.295516 contig340end:+11131 MsG0080048509.01.T01:intergenic
GGTGGAGATATGAGGCTTAT+TGG 0.302805 contig340end:+11053 MsG0080048509.01.T01:intergenic
TCAGTGTTATACATATGTTT+TGG 0.305834 contig340end:-10628 MsG0080048509.01.T01:CDS
CATTGCACCTTTACATATCT+TGG 0.306161 contig340end:+11167 MsG0080048509.01.T01:intergenic
AGAGAGATTTGGTAAAGAAA+TGG 0.342838 contig340end:+11304 MsG0080048509.01.T01:intergenic
TCAAATGCAATGTATAGTTT+TGG 0.343548 contig340end:+10886 MsG0080048509.01.T01:intergenic
AACAACTTTGCTGAACTTGA+TGG 0.353410 contig340end:-10817 MsG0080048509.01.T01:CDS
ATTCAGGTCACGAATTTGTA+TGG 0.358794 contig340end:-10549 MsG0080048509.01.T01:CDS
GGCTTAAAATCATTACTTGT+GGG 0.364000 contig340end:+10404 MsG0080048509.01.T01:intergenic
AAAACTATACATTGCATTTG+AGG 0.373159 contig340end:-10884 MsG0080048509.01.T01:CDS
CGTCGGGAAGATCGACTTGC+TGG 0.375048 contig340end:+11232 MsG0080048509.01.T01:intergenic
GCGAAGGATTGGGGTGGAGG+TGG 0.375209 contig340end:-10248 MsG0080048509.01.T01:CDS
GACGACGTGCTCAAGAGTTT+GGG 0.384983 contig340end:-10108 MsG0080048509.01.T01:CDS
TGGTCTGTACATGGTTATAA+AGG 0.388354 contig340end:-10214 MsG0080048509.01.T01:CDS
TTCTCCACGAATTCTCTAAT+GGG 0.390301 contig340end:+11132 MsG0080048509.01.T01:intergenic
TGCACAGGCCACGTGATCAT+TGG 0.402094 contig340end:+10310 MsG0080048509.01.T01:intergenic
ATATGAGCGGTTTATTCTTA+GGG 0.405201 contig340end:+10984 MsG0080048509.01.T01:intergenic
CGAATTCTCTAATGGGTTCA+TGG 0.405717 contig340end:+11139 MsG0080048509.01.T01:intergenic
TTTCTCTCTTCGAATCCTTT+AGG 0.406990 contig340end:+10466 MsG0080048509.01.T01:intergenic
GAGAGATTTGGTAAAGAAAT+GGG 0.411846 contig340end:+11305 MsG0080048509.01.T01:intergenic
CCTGGTCATATGATTCCTTT+GGG 0.419398 contig340end:-11393 MsG0080048509.01.T01:CDS
GTCGTCTCATAACAATTTGT+TGG 0.422966 contig340end:-10053 MsG0080048509.01.T01:CDS
GGTGTGAAGGCGGAGGAAAA+AGG 0.424725 contig340end:+11269 MsG0080048509.01.T01:intergenic
GGTAACAAGGCTTGGCATCT+TGG 0.424859 contig340end:-10760 MsG0080048509.01.T01:CDS
GAAATGGGCGTTGGAGGGAG+TGG 0.429775 contig340end:+11320 MsG0080048509.01.T01:intergenic
AGAAACATTGAAAATAAGAA+AGG 0.432092 contig340end:-10448 MsG0080048509.01.T01:CDS
TGAATTATTCAAGTGATTTG+CGG 0.436692 contig340end:+9999 MsG0080048509.01.T01:intergenic
ATATGACCAGGTGATAGAAA+TGG 0.439130 contig340end:+11405 MsG0080048509.01.T01:intergenic
TGAGGCAATCCGCAAAAGTA+AGG 0.442335 contig340end:-10851 MsG0080048509.01.T01:CDS
ATGGTAGAGGCTGTTAGTGC+AGG 0.447778 contig340end:-10337 MsG0080048509.01.T01:CDS
TGCTCAAGAGTTTGGGAGAA+AGG 0.448092 contig340end:-10101 MsG0080048509.01.T01:CDS
GCGAGCGGAATAGAAAATTC+AGG 0.456840 contig340end:-10565 MsG0080048509.01.T01:CDS
CGAAGGATTGGGGTGGAGGT+GGG 0.457878 contig340end:-10247 MsG0080048509.01.T01:CDS
ATCGACGGAGGAGAGAGATT+TGG 0.462546 contig340end:+11293 MsG0080048509.01.T01:intergenic
TGTGCGAAGGATTGGGGTGG+AGG 0.463035 contig340end:-10251 MsG0080048509.01.T01:CDS
GGTAAAGAAATGGGCGTTGG+AGG 0.467446 contig340end:+11314 MsG0080048509.01.T01:intergenic
TTATTCTTAGGGATTCTATG+AGG 0.473109 contig340end:+10995 MsG0080048509.01.T01:intergenic
TTGCCGACTGTGTATACCCT+TGG 0.475253 contig340end:-11089 MsG0080048509.01.T01:CDS
GTGATAGAATGAGGAAAACT+TGG 0.478118 contig340end:+10925 MsG0080048509.01.T01:intergenic
ATAACTGTTGTGCGAAGGAT+TGG 0.478687 contig340end:-10259 MsG0080048509.01.T01:CDS
GTGCATTCATGACACATTGC+GGG 0.478828 contig340end:-10369 MsG0080048509.01.T01:CDS
TTCATTCCATTTCTATCACC+TGG 0.481533 contig340end:-11411 MsG0080048509.01.T01:CDS
GGTGTCAGGGTTAGCGGTGG+AGG 0.484411 contig340end:+11194 MsG0080048509.01.T01:intergenic
GACAATGATTCAACGCCGTC+GGG 0.484645 contig340end:+11216 MsG0080048509.01.T01:intergenic
ATACCCTTGGATTAATGACT+TGG 0.488317 contig340end:-11076 MsG0080048509.01.T01:CDS
TAACTGTTGTGCGAAGGATT+GGG 0.489191 contig340end:-10258 MsG0080048509.01.T01:CDS
AAAAGCTGTGAGGAGATTGA+TGG 0.495199 contig340end:-10158 MsG0080048509.01.T01:CDS
GGCCATGGTGTCAGGGTTAG+CGG 0.497248 contig340end:+11188 MsG0080048509.01.T01:intergenic
CAGTCGGCAATGATGTAGTC+AGG 0.498245 contig340end:+11102 MsG0080048509.01.T01:intergenic
TGAACCCATTAGAGAATTCG+TGG 0.503916 contig340end:-11136 MsG0080048509.01.T01:CDS
GCAGCTTTGTTTGCATCCCA+TGG 0.505804 contig340end:-11363 MsG0080048509.01.T01:CDS
AAACCATGGGTAACAAGGCT+TGG 0.509918 contig340end:-10768 MsG0080048509.01.T01:CDS
GAAGATCGACTTGCTGGGAG+GGG 0.511499 contig340end:+11238 MsG0080048509.01.T01:intergenic
GGAAGATCGACTTGCTGGGA+GGG 0.512584 contig340end:+11237 MsG0080048509.01.T01:intergenic
TTTGGTAAAGAAATGGGCGT+TGG 0.514520 contig340end:+11311 MsG0080048509.01.T01:intergenic
TGATCGTGACTTGTTGGCCA+TGG 0.514668 contig340end:+11346 MsG0080048509.01.T01:intergenic
GTGAAGAGGAGAAAGAAAAG+TGG 0.515437 contig340end:-10492 MsG0080048509.01.T01:CDS
TCAGCAATGGAAAATGGTGT+TGG 0.516834 contig340end:-11459 None:intergenic
ACCTTTACATATCTTGGCCA+TGG 0.518558 contig340end:+11173 MsG0080048509.01.T01:intergenic
GGAATGAAGTGAAGTTTCAA+TGG 0.521782 contig340end:+11426 MsG0080048509.01.T01:intergenic
TTCAGGTCACGAATTTGTAT+GGG 0.522733 contig340end:-10548 MsG0080048509.01.T01:CDS
TATACATTGCATTTGAGGAA+AGG 0.525590 contig340end:-10879 MsG0080048509.01.T01:CDS
TGGGTTGTTCCTGAGAAGAA+AGG 0.526140 contig340end:-10529 MsG0080048509.01.T01:CDS
AGGGGAAGTCAACGGTGTGA+AGG 0.532277 contig340end:+11256 MsG0080048509.01.T01:intergenic
GTAAAGAAATGGGCGTTGGA+GGG 0.533872 contig340end:+11315 MsG0080048509.01.T01:intergenic
TGGCTTAAAATCATTACTTG+TGG 0.534235 contig340end:+10403 MsG0080048509.01.T01:intergenic
GTCGGGAAGATCGACTTGCT+GGG 0.538259 contig340end:+11233 MsG0080048509.01.T01:intergenic
GCTACACATGCTGTTGAAGA+AGG 0.538430 contig340end:-10079 MsG0080048509.01.T01:CDS
AAGGCAATGGTGGAGATATG+AGG 0.540237 contig340end:+11045 MsG0080048509.01.T01:intergenic
AAAGAAAAGTGGTTGCCTAA+AGG 0.541871 contig340end:-10481 MsG0080048509.01.T01:CDS
ATGCCAAGCCTTGTTACCCA+TGG 0.547383 contig340end:+10765 MsG0080048509.01.T01:intergenic
TAGAACTGTTCTCCTTGCAC+AGG 0.551519 contig340end:+10295 MsG0080048509.01.T01:intergenic
GAGGACAAGGTGATAGAATG+AGG 0.553230 contig340end:+10916 MsG0080048509.01.T01:intergenic
CGGGTCGAACTCCATGGTAG+AGG 0.558310 contig340end:-10350 MsG0080048509.01.T01:CDS
TGGAGGTGGGTGCAACAGAG+TGG 0.559999 contig340end:-10234 MsG0080048509.01.T01:CDS
GGACGATGTCGATGAAGCTA+AGG 0.561480 contig340end:-10137 MsG0080048509.01.T01:CDS
GGAAGTCAACGGTGTGAAGG+CGG 0.561740 contig340end:+11259 MsG0080048509.01.T01:intergenic
GCAACAGAGTGGTCTGTACA+TGG 0.562517 contig340end:-10223 MsG0080048509.01.T01:CDS
CCCAAAGGAATCATATGACC+AGG 0.562986 contig340end:+11393 MsG0080048509.01.T01:intergenic
TTGGCCAAGTCATTAATCCA+AGG 0.563466 contig340end:+11072 MsG0080048509.01.T01:intergenic
GGGTTGTTCCTGAGAAGAAA+GGG 0.565280 contig340end:-10528 MsG0080048509.01.T01:CDS
ATGATCACGTGGCCTGTGCA+AGG 0.565482 contig340end:-10307 MsG0080048509.01.T01:CDS
TTATAAAGGAAAAGAGAAAG+TGG 0.566231 contig340end:-10200 MsG0080048509.01.T01:CDS
CATTAGAGAATTCGTGGAGA+AGG 0.573370 contig340end:-11130 MsG0080048509.01.T01:CDS
TATTCTTAGGGATTCTATGA+GGG 0.574610 contig340end:+10996 MsG0080048509.01.T01:intergenic
TGGTGATGATCGTGACTTGT+TGG 0.578665 contig340end:+11340 MsG0080048509.01.T01:intergenic
GATCGTGACTTGTTGGCCAT+GGG 0.580057 contig340end:+11347 MsG0080048509.01.T01:intergenic
ACCATGGCCAAGATATGTAA+AGG 0.580374 contig340end:-11174 MsG0080048509.01.T01:CDS
TGGTAGAGGCTGTTAGTGCA+GGG 0.581941 contig340end:-10336 MsG0080048509.01.T01:CDS
GGACAATGATTCAACGCCGT+CGG 0.582576 contig340end:+11215 MsG0080048509.01.T01:intergenic
ATATCTTGGCCATGGTGTCA+GGG 0.583116 contig340end:+11181 MsG0080048509.01.T01:intergenic
CACATGCTGTTGAAGAAGGT+GGG 0.586710 contig340end:-10075 MsG0080048509.01.T01:CDS
GAAGAATGCGGTGAAGGCAA+TGG 0.587503 contig340end:+11032 MsG0080048509.01.T01:intergenic
GAATGCGGTGAAGGCAATGG+TGG 0.589149 contig340end:+11035 MsG0080048509.01.T01:intergenic
AGTCAACGGTGTGAAGGCGG+AGG 0.591650 contig340end:+11262 MsG0080048509.01.T01:intergenic
TGGCCAAGTCATTAATCCAA+GGG 0.592379 contig340end:+11073 MsG0080048509.01.T01:intergenic
AACTGTTGTGCGAAGGATTG+GGG 0.593522 contig340end:-10257 MsG0080048509.01.T01:CDS
TGAGAAAACCATGGGTAACA+AGG 0.593973 contig340end:-10773 MsG0080048509.01.T01:CDS
GCTTAAAATCATTACTTGTG+GGG 0.594385 contig340end:+10405 MsG0080048509.01.T01:intergenic
AGCTGATAACTGTTGTGCGA+AGG 0.596739 contig340end:-10264 MsG0080048509.01.T01:CDS
ACACATGCTGTTGAAGAAGG+TGG 0.597671 contig340end:-10076 MsG0080048509.01.T01:CDS
TATGAGGGGAAATGAGAGTG+TGG 0.597887 contig340end:-10698 MsG0080048509.01.T01:CDS
CTATGAGGGATACTGTAAAG+AGG 0.601294 contig340end:+11010 MsG0080048509.01.T01:intergenic
GCGCGCATGAGTGTCTAAGT+TGG 0.602057 contig340end:-10672 MsG0080048509.01.T01:CDS
CACCGCTAACCCTGACACCA+TGG 0.606001 contig340end:-11190 MsG0080048509.01.T01:CDS
GGAAAAGAGAAAGTGGTGAG+TGG 0.606286 contig340end:-10193 MsG0080048509.01.T01:CDS
AAAGAGGAAGAATGCGGTGA+AGG 0.610474 contig340end:+11026 MsG0080048509.01.T01:intergenic
GAGGCAATCCGCAAAAGTAA+GGG 0.610869 contig340end:-10850 MsG0080048509.01.T01:CDS
CATGGTGTCAGGGTTAGCGG+TGG 0.612765 contig340end:+11191 MsG0080048509.01.T01:intergenic
ATTTGAGGAAAGGATGCTTG+AGG 0.617800 contig340end:-10869 MsG0080048509.01.T01:CDS
CAAACACTATGAGAAAACCA+TGG 0.618415 contig340end:-10782 MsG0080048509.01.T01:CDS
AATTCTTGTCAGAATATGAG+CGG 0.625040 contig340end:+10971 MsG0080048509.01.T01:intergenic
GGTGCATTCATGACACATTG+CGG 0.634968 contig340end:-10370 MsG0080048509.01.T01:CDS
GGGAAGATCGACTTGCTGGG+AGG 0.636057 contig340end:+11236 MsG0080048509.01.T01:intergenic
TGCACTAACAGCCTCTACCA+TGG 0.636137 contig340end:+10339 MsG0080048509.01.T01:intergenic
ACATTGCGGGTCGAACTCCA+TGG 0.637514 contig340end:-10356 MsG0080048509.01.T01:CDS
AATCCAAGGGTATACACAGT+CGG 0.638606 contig340end:+11086 MsG0080048509.01.T01:intergenic
AAACACTATGAGAAAACCAT+GGG 0.643342 contig340end:-10781 MsG0080048509.01.T01:CDS
CAGGGATTCCAATGATCACG+TGG 0.644606 contig340end:-10318 MsG0080048509.01.T01:CDS
CAGCAAGTCGATCTTCCCGA+CGG 0.652616 contig340end:-11231 MsG0080048509.01.T01:CDS
CAACTTTACGAGATTGCGAG+CGG 0.660575 contig340end:-10580 MsG0080048509.01.T01:CDS
AAAGCTGCTATGTCACCCAA+AGG 0.671212 contig340end:+11378 MsG0080048509.01.T01:intergenic
TGTTGTGCGAAGGATTGGGG+TGG 0.673788 contig340end:-10254 MsG0080048509.01.T01:CDS
TTGCTGGGAGGGGAAGTCAA+CGG 0.678127 contig340end:+11248 MsG0080048509.01.T01:intergenic
TTTGAAGAGAAATCTATGAG+GGG 0.678641 contig340end:-10712 MsG0080048509.01.T01:CDS
TACTGTAAAGAGGAAGAATG+CGG 0.695334 contig340end:+11020 MsG0080048509.01.T01:intergenic
AAAATGGTGTTGGAGTTGAA+CGG 0.721065 contig340end:-11449 MsG0080048509.01.T01:CDS
TGAATGCACCCACAGCAGCG+TGG 0.743778 contig340end:+10383 MsG0080048508.01.T01:intergenic
ATTCTCTAATGGGTTCATGG+AGG 0.749674 contig340end:+11142 MsG0080048508.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAACATTGAAAATAAGAA+AGG - contig340end:11008-11027 MsG0080048509.01.T01:CDS 20.0%
!!! ATAAGAAAGGTTTTATCATT+AGG - contig340end:11021-11040 MsG0080048509.01.T01:CDS 20.0%
!!! TAAGAAAGGTTTTATCATTA+GGG - contig340end:11022-11041 MsG0080048509.01.T01:CDS 20.0%
! AAAACTATACATTGCATTTG+AGG - contig340end:10572-10591 MsG0080048509.01.T01:CDS 25.0%
! TTATAAAGGAAAAGAGAAAG+TGG - contig340end:11256-11275 MsG0080048509.01.T01:CDS 25.0%
!! CAGTGTTATACATATGTTTT+GGG - contig340end:10829-10848 MsG0080048509.01.T01:CDS 25.0%
!! TCAAATGCAATGTATAGTTT+TGG + contig340end:10573-10592 MsG0080048509.01.T01:intergenic 25.0%
!! TCAGTGTTATACATATGTTT+TGG - contig340end:10828-10847 MsG0080048509.01.T01:CDS 25.0%
!!! AAGAAAGGTTTTATCATTAG+GGG - contig340end:11023-11042 MsG0080048509.01.T01:CDS 25.0%
!!! TTTTGAAGAGAAATCTATGA+GGG - contig340end:10743-10762 MsG0080048509.01.T01:CDS 25.0%
AAACACTATGAGAAAACCAT+GGG - contig340end:10675-10694 MsG0080048509.01.T01:CDS 30.0%
AATATGAGCGGTTTATTCTT+AGG + contig340end:10476-10495 MsG0080048509.01.T01:intergenic 30.0%
AATTCTTGTCAGAATATGAG+CGG + contig340end:10488-10507 MsG0080048509.01.T01:intergenic 30.0%
ATAGTATAGAAAAAGCTGTG+AGG - contig340end:11288-11307 MsG0080048509.01.T01:CDS 30.0%
ATATGAGCGGTTTATTCTTA+GGG + contig340end:10475-10494 MsG0080048509.01.T01:intergenic 30.0%
GCTTAAAATCATTACTTGTG+GGG + contig340end:11054-11073 MsG0080048509.01.T01:intergenic 30.0%
GGCTTAAAATCATTACTTGT+GGG + contig340end:11055-11074 MsG0080048509.01.T01:intergenic 30.0%
TATACATTGCATTTGAGGAA+AGG - contig340end:10577-10596 MsG0080048509.01.T01:CDS 30.0%
TATTCTTAGGGATTCTATGA+GGG + contig340end:10463-10482 MsG0080048509.01.T01:intergenic 30.0%
TGGCTTAAAATCATTACTTG+TGG + contig340end:11056-11075 MsG0080048509.01.T01:intergenic 30.0%
TTATTCTTAGGGATTCTATG+AGG + contig340end:10464-10483 MsG0080048509.01.T01:intergenic 30.0%
TTTGAAGAGAAATCTATGAG+GGG - contig340end:10744-10763 MsG0080048509.01.T01:CDS 30.0%
! AGAGAGATTTGGTAAAGAAA+TGG + contig340end:10155-10174 MsG0080048509.01.T01:intergenic 30.0%
! GAGAGATTTGGTAAAGAAAT+GGG + contig340end:10154-10173 MsG0080048509.01.T01:intergenic 30.0%
!! AGAAAGGTTTTATCATTAGG+GGG - contig340end:11024-11043 MsG0080048509.01.T01:CDS 30.0%
!! CTTTTGAAGAGAAATCTATG+AGG - contig340end:10742-10761 MsG0080048509.01.T01:CDS 30.0%
AAAGAAAAGTGGTTGCCTAA+AGG - contig340end:10975-10994 MsG0080048509.01.T01:CDS 35.0%
AACAACTTTGCTGAACTTGA+TGG - contig340end:10639-10658 MsG0080048509.01.T01:CDS 35.0%
ATACCCTTGGATTAATGACT+TGG - contig340end:10380-10399 MsG0080048509.01.T01:CDS 35.0%
ATATGACCAGGTGATAGAAA+TGG + contig340end:10054-10073 MsG0080048509.01.T01:intergenic 35.0%
ATTCAGGTCACGAATTTGTA+TGG - contig340end:10907-10926 MsG0080048509.01.T01:CDS 35.0%
CAAACACTATGAGAAAACCA+TGG - contig340end:10674-10693 MsG0080048509.01.T01:CDS 35.0%
CATTGCACCTTTACATATCT+TGG + contig340end:10292-10311 MsG0080048509.01.T01:intergenic 35.0%
GAAAAAAGATGAGAGTGAAG+AGG - contig340end:10950-10969 MsG0080048509.01.T01:CDS 35.0%
GGAATGAAGTGAAGTTTCAA+TGG + contig340end:10033-10052 MsG0080048509.01.T01:intergenic 35.0%
GTCGTCTCATAACAATTTGT+TGG - contig340end:11403-11422 MsG0080048509.01.T01:CDS 35.0%
GTGATAGAATGAGGAAAACT+TGG + contig340end:10534-10553 MsG0080048509.01.T01:intergenic 35.0%
TACTGTAAAGAGGAAGAATG+CGG + contig340end:10439-10458 MsG0080048509.01.T01:intergenic 35.0%
TGGTCTGTACATGGTTATAA+AGG - contig340end:11242-11261 MsG0080048509.01.T01:CDS 35.0%
TTCAGGTCACGAATTTGTAT+GGG - contig340end:10908-10927 MsG0080048509.01.T01:CDS 35.0%
TTCATTCCATTTCTATCACC+TGG - contig340end:10045-10064 MsG0080048509.01.T01:CDS 35.0%
TTCTCCACGAATTCTCTAAT+GGG + contig340end:10327-10346 MsG0080048509.01.T01:intergenic 35.0%
TTTCTCTCTTCGAATCCTTT+AGG + contig340end:10993-11012 MsG0080048509.01.T01:intergenic 35.0%
! AAAATGGTGTTGGAGTTGAA+CGG - contig340end:10007-10026 MsG0080048509.01.T01:CDS 35.0%
! GTTTTGCGAATAAGACAAGT+TGG + contig340end:10723-10742 MsG0080048509.01.T01:intergenic 35.0%
!! TTATGAGTCCCTTACTTTTG+CGG + contig340end:10617-10636 MsG0080048509.01.T01:intergenic 35.0%
!!! GTATAGTTTTGGTGTTGTTG+AGG + contig340end:10562-10581 MsG0080048509.01.T01:intergenic 35.0%
!!! TCTTTTTTCCCTTTCTTCTC+AGG + contig340end:10939-10958 MsG0080048509.01.T01:intergenic 35.0%
AAAAGCTGTGAGGAGATTGA+TGG - contig340end:11298-11317 MsG0080048509.01.T01:CDS 40.0%
ACCATGGCCAAGATATGTAA+AGG - contig340end:10282-10301 MsG0080048509.01.T01:CDS 40.0%
ACCTGGTCATATGATTCCTT+TGG - contig340end:10062-10081 MsG0080048509.01.T01:CDS 40.0%
ACCTTTACATATCTTGGCCA+TGG + contig340end:10286-10305 MsG0080048509.01.T01:intergenic 40.0%
ATAACTGTTGTGCGAAGGAT+TGG - contig340end:11197-11216 MsG0080048509.01.T01:CDS 40.0%
ATTTGAGGAAAGGATGCTTG+AGG - contig340end:10587-10606 MsG0080048509.01.T01:CDS 40.0%
CATTAGAGAATTCGTGGAGA+AGG - contig340end:10326-10345 MsG0080048509.01.T01:CDS 40.0%
CCTGGTCATATGATTCCTTT+GGG - contig340end:10063-10082 MsG0080048509.01.T01:CDS 40.0%
CTATGAGGGATACTGTAAAG+AGG + contig340end:10449-10468 MsG0080048509.01.T01:intergenic 40.0%
CTTCTCCACGAATTCTCTAA+TGG + contig340end:10328-10347 MsG0080048509.01.T01:intergenic 40.0%
GTGAAGAGGAGAAAGAAAAG+TGG - contig340end:10964-10983 MsG0080048509.01.T01:CDS 40.0%
TAACTGTTGTGCGAAGGATT+GGG - contig340end:11198-11217 MsG0080048509.01.T01:CDS 40.0%
TGAACCCATTAGAGAATTCG+TGG - contig340end:10320-10339 MsG0080048509.01.T01:CDS 40.0%
TGAGAAAACCATGGGTAACA+AGG - contig340end:10683-10702 MsG0080048509.01.T01:CDS 40.0%
TGGCCAAGTCATTAATCCAA+GGG + contig340end:10386-10405 MsG0080048509.01.T01:intergenic 40.0%
TTGGCCAAGTCATTAATCCA+AGG + contig340end:10387-10406 MsG0080048509.01.T01:intergenic 40.0%
TTTGGTAAAGAAATGGGCGT+TGG + contig340end:10148-10167 MsG0080048509.01.T01:intergenic 40.0%
! AATCCAAGGGTATACACAGT+CGG + contig340end:10373-10392 MsG0080048509.01.T01:intergenic 40.0%
!! AAGGTTTTATCATTAGGGGG+TGG - contig340end:11027-11046 MsG0080048509.01.T01:CDS 40.0%
!! AGGTTTTATCATTAGGGGGT+GGG - contig340end:11028-11047 MsG0080048509.01.T01:CDS 40.0%
!! ATTCTCTAATGGGTTCATGG+AGG + contig340end:10317-10336 MsG0080048509.01.T01:intergenic 40.0%
!! CGAATTCTCTAATGGGTTCA+TGG + contig340end:10320-10339 MsG0080048509.01.T01:intergenic 40.0%
!!! TTTTGGTGTTGTTGAGGACA+AGG + contig340end:10556-10575 MsG0080048509.01.T01:intergenic 40.0%
AAACCATGGGTAACAAGGCT+TGG - contig340end:10688-10707 MsG0080048509.01.T01:CDS 45.0%
AAAGAGGAAGAATGCGGTGA+AGG + contig340end:10433-10452 MsG0080048509.01.T01:intergenic 45.0%
AAAGCTGCTATGTCACCCAA+AGG + contig340end:10081-10100 MsG0080048509.01.T01:intergenic 45.0%
AACTGTTGTGCGAAGGATTG+GGG - contig340end:11199-11218 MsG0080048509.01.T01:CDS 45.0%
ACACATGCTGTTGAAGAAGG+TGG - contig340end:11380-11399 MsG0080048509.01.T01:CDS 45.0%
AGCTGATAACTGTTGTGCGA+AGG - contig340end:11192-11211 MsG0080048509.01.T01:CDS 45.0%
CAACTTTACGAGATTGCGAG+CGG - contig340end:10876-10895 MsG0080048509.01.T01:CDS 45.0%
CACATGCTGTTGAAGAAGGT+GGG - contig340end:11381-11400 MsG0080048509.01.T01:CDS 45.0%
CCCAAAGGAATCATATGACC+AGG + contig340end:10066-10085 MsG0080048509.01.T01:intergenic 45.0%
GAGGACAAGGTGATAGAATG+AGG + contig340end:10543-10562 MsG0080048509.01.T01:intergenic 45.0%
GAGGCAATCCGCAAAAGTAA+GGG - contig340end:10606-10625 MsG0080048509.01.T01:CDS 45.0%
GCGAGCGGAATAGAAAATTC+AGG - contig340end:10891-10910 MsG0080048509.01.T01:CDS 45.0%
GCTACACATGCTGTTGAAGA+AGG - contig340end:11377-11396 MsG0080048509.01.T01:CDS 45.0%
GGAAAAGAGAAAGTGGTGAG+TGG - contig340end:11263-11282 MsG0080048509.01.T01:CDS 45.0%
GGGTTGTTCCTGAGAAGAAA+GGG - contig340end:10928-10947 MsG0080048509.01.T01:CDS 45.0%
GGTGCATTCATGACACATTG+CGG - contig340end:11086-11105 MsG0080048509.01.T01:CDS 45.0%
GGTGGAGATATGAGGCTTAT+TGG + contig340end:10406-10425 MsG0080048509.01.T01:intergenic 45.0%
GTGCATTCATGACACATTGC+GGG - contig340end:11087-11106 MsG0080048509.01.T01:CDS 45.0%
TAGAACTGTTCTCCTTGCAC+AGG + contig340end:11164-11183 MsG0080048509.01.T01:intergenic 45.0%
TATGAGGGGAAATGAGAGTG+TGG - contig340end:10758-10777 MsG0080048509.01.T01:CDS 45.0%
TGAGGCAATCCGCAAAAGTA+AGG - contig340end:10605-10624 MsG0080048509.01.T01:CDS 45.0%
TGCTCAAGAGTTTGGGAGAA+AGG - contig340end:11355-11374 MsG0080048509.01.T01:CDS 45.0%
TGGGTTGTTCCTGAGAAGAA+AGG - contig340end:10927-10946 MsG0080048509.01.T01:CDS 45.0%
! AAGGCAATGGTGGAGATATG+AGG + contig340end:10414-10433 MsG0080048509.01.T01:intergenic 45.0%
! ATATCTTGGCCATGGTGTCA+GGG + contig340end:10278-10297 MsG0080048509.01.T01:intergenic 45.0%
! ATTTTAAGCCACGCTGCTGT+GGG - contig340end:11065-11084 MsG0080048509.01.T01:CDS 45.0%
! TGGTGATGATCGTGACTTGT+TGG + contig340end:10119-10138 MsG0080048509.01.T01:intergenic 45.0%
!! GTAAAGAAATGGGCGTTGGA+GGG + contig340end:10144-10163 MsG0080048509.01.T01:intergenic 45.0%
AGACGACGTGCTCAAGAGTT+TGG - contig340end:11347-11366 MsG0080048509.01.T01:CDS 50.0%
ATCGACGGAGGAGAGAGATT+TGG + contig340end:10166-10185 MsG0080048509.01.T01:intergenic 50.0%
ATGGTAGAGGCTGTTAGTGC+AGG - contig340end:11119-11138 MsG0080048509.01.T01:CDS 50.0%
CAGGGATTCCAATGATCACG+TGG - contig340end:11138-11157 MsG0080048509.01.T01:CDS 50.0%
CAGTCGGCAATGATGTAGTC+AGG + contig340end:10357-10376 MsG0080048509.01.T01:intergenic 50.0%
CATATCTTGGCCATGGTGTC+AGG + contig340end:10279-10298 MsG0080048509.01.T01:intergenic 50.0%
GAAGAATGCGGTGAAGGCAA+TGG + contig340end:10427-10446 MsG0080048509.01.T01:intergenic 50.0%
GACAATGATTCAACGCCGTC+GGG + contig340end:10243-10262 MsG0080048509.01.T01:intergenic 50.0%
GACGACGTGCTCAAGAGTTT+GGG - contig340end:11348-11367 MsG0080048509.01.T01:CDS 50.0%
GCAACAGAGTGGTCTGTACA+TGG - contig340end:11233-11252 MsG0080048509.01.T01:CDS 50.0%
GGACAATGATTCAACGCCGT+CGG + contig340end:10244-10263 MsG0080048509.01.T01:intergenic 50.0%
GGACGATGTCGATGAAGCTA+AGG - contig340end:11319-11338 MsG0080048509.01.T01:CDS 50.0%
GGTAACAAGGCTTGGCATCT+TGG - contig340end:10696-10715 MsG0080048509.01.T01:CDS 50.0%
GTGTGAAGGCGGAGGAAAAA+GGG + contig340end:10189-10208 MsG0080048509.01.T01:intergenic 50.0%
TGCACTAACAGCCTCTACCA+TGG + contig340end:11120-11139 MsG0080048509.01.T01:intergenic 50.0%
TGGTAGAGGCTGTTAGTGCA+GGG - contig340end:11120-11139 MsG0080048509.01.T01:CDS 50.0%
! GATTTTAAGCCACGCTGCTG+TGG - contig340end:11064-11083 MsG0080048509.01.T01:CDS 50.0%
! TTGCCGACTGTGTATACCCT+TGG - contig340end:10367-10386 MsG0080048509.01.T01:CDS 50.0%
!! ATGCCAAGCCTTGTTACCCA+TGG + contig340end:10694-10713 MsG0080048509.01.T01:intergenic 50.0%
!! GATCGTGACTTGTTGGCCAT+GGG + contig340end:10112-10131 MsG0080048509.01.T01:intergenic 50.0%
!! GCAGCTTTGTTTGCATCCCA+TGG - contig340end:10093-10112 MsG0080048509.01.T01:CDS 50.0%
!! GGTAAAGAAATGGGCGTTGG+AGG + contig340end:10145-10164 MsG0080048509.01.T01:intergenic 50.0%
!! TGATCGTGACTTGTTGGCCA+TGG + contig340end:10113-10132 MsG0080048509.01.T01:intergenic 50.0%
ACATTGCGGGTCGAACTCCA+TGG - contig340end:11100-11119 MsG0080048509.01.T01:CDS 55.0%
AGGGGAAGTCAACGGTGTGA+AGG + contig340end:10203-10222 MsG0080048509.01.T01:intergenic 55.0%
ATGATCACGTGGCCTGTGCA+AGG - contig340end:11149-11168 MsG0080048509.01.T01:CDS 55.0%
CAGCAAGTCGATCTTCCCGA+CGG - contig340end:10225-10244 MsG0080048509.01.T01:CDS 55.0%
GAATGCGGTGAAGGCAATGG+TGG + contig340end:10424-10443 MsG0080048509.01.T01:intergenic 55.0%
GAGGAAAAAGGGATCGACGG+AGG + contig340end:10178-10197 MsG0080048509.01.T01:intergenic 55.0%
GCGCGCATGAGTGTCTAAGT+TGG - contig340end:10784-10803 MsG0080048509.01.T01:CDS 55.0%
GCGGAGGAAAAAGGGATCGA+CGG + contig340end:10181-10200 MsG0080048509.01.T01:intergenic 55.0%
GGAAGTCAACGGTGTGAAGG+CGG + contig340end:10200-10219 MsG0080048509.01.T01:intergenic 55.0%
GGTGTGAAGGCGGAGGAAAA+AGG + contig340end:10190-10209 MsG0080048509.01.T01:intergenic 55.0%
TGCACAGGCCACGTGATCAT+TGG + contig340end:11149-11168 MsG0080048509.01.T01:intergenic 55.0%
TGTTGTGCGAAGGATTGGGG+TGG - contig340end:11202-11221 MsG0080048509.01.T01:CDS 55.0%
TTGCTGGGAGGGGAAGTCAA+CGG + contig340end:10211-10230 MsG0080048509.01.T01:intergenic 55.0%
!! GAAGATCGACTTGCTGGGAG+GGG + contig340end:10221-10240 MsG0080048509.01.T01:intergenic 55.0%
!! GGAAGATCGACTTGCTGGGA+GGG + contig340end:10222-10241 MsG0080048509.01.T01:intergenic 55.0%
!! GTCGGGAAGATCGACTTGCT+GGG + contig340end:10226-10245 MsG0080048509.01.T01:intergenic 55.0%
AGTCAACGGTGTGAAGGCGG+AGG + contig340end:10197-10216 MsG0080048509.01.T01:intergenic 60.0%
CACCGCTAACCCTGACACCA+TGG - contig340end:10266-10285 MsG0080048509.01.T01:CDS 60.0%
CGAAGGATTGGGGTGGAGGT+GGG - contig340end:11209-11228 MsG0080048509.01.T01:CDS 60.0%
CGGGTCGAACTCCATGGTAG+AGG - contig340end:11106-11125 MsG0080048509.01.T01:CDS 60.0%
TGAATGCACCCACAGCAGCG+TGG + contig340end:11076-11095 MsG0080048509.01.T01:intergenic 60.0%
TGGAGGTGGGTGCAACAGAG+TGG - contig340end:11222-11241 MsG0080048509.01.T01:CDS 60.0%
TGTGCGAAGGATTGGGGTGG+AGG - contig340end:11205-11224 MsG0080048509.01.T01:CDS 60.0%
! CATGGTGTCAGGGTTAGCGG+TGG + contig340end:10268-10287 MsG0080048509.01.T01:intergenic 60.0%
! GGCCATGGTGTCAGGGTTAG+CGG + contig340end:10271-10290 MsG0080048509.01.T01:intergenic 60.0%
!! CGTCGGGAAGATCGACTTGC+TGG + contig340end:10227-10246 MsG0080048509.01.T01:intergenic 60.0%
!! GAAATGGGCGTTGGAGGGAG+TGG + contig340end:10139-10158 MsG0080048509.01.T01:intergenic 60.0%
!! GGGAAGATCGACTTGCTGGG+AGG + contig340end:10223-10242 MsG0080048509.01.T01:intergenic 60.0%
GCGAAGGATTGGGGTGGAGG+TGG - contig340end:11208-11227 MsG0080048509.01.T01:CDS 65.0%
! GGTGTCAGGGTTAGCGGTGG+AGG + contig340end:10265-10284 MsG0080048509.01.T01:intergenic 65.0%
Chromosome Type Strat End Strand Name
contig340end gene 10003 11475 10003 ID=MsG0080048509.01;Name=MsG0080048509.01
contig340end mRNA 10003 11475 10003 ID=MsG0080048509.01.T01;Parent=MsG0080048509.01;Name=MsG0080048509.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|490
contig340end exon 10003 11475 10003 ID=MsG0080048509.01.T01:exon:7217;Parent=MsG0080048509.01.T01
contig340end CDS 10003 11475 10003 ID=MsG0080048509.01.T01:cds;Parent=MsG0080048509.01.T01
Gene Sequence

>MsG0080048509.01.T01

ATGGAAAATGGTGTTGGAGTTGAACGGCCATTGAAACTTCACTTCATTCCATTTCTATCACCTGGTCATATGATTCCTTTGGGTGACATAGCAGCTTTGTTTGCATCCCATGGCCAACAAGTCACGATCATCACCACTCCCTCCAACGCCCATTTCTTTACCAAATCTCTCTCCTCCGTCGATCCCTTTTTCCTCCGCCTTCACACCGTTGACTTCCCCTCCCAGCAAGTCGATCTTCCCGACGGCGTTGAATCATTGTCCTCCACCGCTAACCCTGACACCATGGCCAAGATATGTAAAGGTGCAATGCTCCTCCATGAACCCATTAGAGAATTCGTGGAGAAGGATCAACCTGACTACATCATTGCCGACTGTGTATACCCTTGGATTAATGACTTGGCCAATAAGCCTCATATCTCCACCATTGCCTTCACCGCATTCTTCCTCTTTACAGTATCCCTCATAGAATCCCTAAGAATAAACCGCTCATATTCTGACAAGAATTCTAGTTCGAGTTCGTTCGTTGATCCAAGTTTTCCTCATTCTATCACCTTGTCCTCAACAACACCAAAACTATACATTGCATTTGAGGAAAGGATGCTTGAGGCAATCCGCAAAAGTAAGGGACTCATAATAAACAACTTTGCTGAACTTGATGGTGAAGATTGCATCAAACACTATGAGAAAACCATGGGTAACAAGGCTTGGCATCTTGGTCCAACTTGTCTTATTCGCAAAACTTTTGAAGAGAAATCTATGAGGGGAAATGAGAGTGTGGTTAGCGCGCATGAGTGTCTAAGTTGGCTCAATTCAAAGCTAGATAATTCAGTGTTATACATATGTTTTGGGAGCATCTCTTTTTTCTCTAATAAACAACTTTACGAGATTGCGAGCGGAATAGAAAATTCAGGTCACGAATTTGTATGGGTTGTTCCTGAGAAGAAAGGGAAAAAAGATGAGAGTGAAGAGGAGAAAGAAAAGTGGTTGCCTAAAGGATTCGAAGAGAGAAACATTGAAAATAAGAAAGGTTTTATCATTAGGGGGTGGGCCCCACAAGTAATGATTTTAAGCCACGCTGCTGTGGGTGCATTCATGACACATTGCGGGTCGAACTCCATGGTAGAGGCTGTTAGTGCAGGGATTCCAATGATCACGTGGCCTGTGCAAGGAGAACAGTTCTATAATGAGAAGCTGATAACTGTTGTGCGAAGGATTGGGGTGGAGGTGGGTGCAACAGAGTGGTCTGTACATGGTTATAAAGGAAAAGAGAAAGTGGTGAGTGGACATAGTATAGAAAAAGCTGTGAGGAGATTGATGGACGATGTCGATGAAGCTAAGGAAATTAGACGACGTGCTCAAGAGTTTGGGAGAAAGGCTACACATGCTGTTGAAGAAGGTGGGTCGTCTCATAACAATTTGTTGGTTTTGATTGACGATCTTAAAAGATTGAGAGACCGCAAATCACTTGAATAA

Protein sequence

>MsG0080048509.01.T01

MENGVGVERPLKLHFIPFLSPGHMIPLGDIAALFASHGQQVTIITTPSNAHFFTKSLSSVDPFFLRLHTVDFPSQQVDLPDGVESLSSTANPDTMAKICKGAMLLHEPIREFVEKDQPDYIIADCVYPWINDLANKPHISTIAFTAFFLFTVSLIESLRINRSYSDKNSSSSSFVDPSFPHSITLSSTTPKLYIAFEERMLEAIRKSKGLIINNFAELDGEDCIKHYEKTMGNKAWHLGPTCLIRKTFEEKSMRGNESVVSAHECLSWLNSKLDNSVLYICFGSISFFSNKQLYEIASGIENSGHEFVWVVPEKKGKKDESEEEKEKWLPKGFEERNIENKKGFIIRGWAPQVMILSHAAVGAFMTHCGSNSMVEAVSAGIPMITWPVQGEQFYNEKLITVVRRIGVEVGATEWSVHGYKGKEKVVSGHSIEKAVRRLMDDVDEAKEIRRRAQEFGRKATHAVEEGGSSHNNLLVLIDDLKRLRDRKSLE*