AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035579.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035579.01.T01 MTR_6g084580 87.662 308 3 1 1 273 1 308 0.0 534
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035579.01.T01 AT1G51740 66.019 309 69 2 1 273 1 309 6.61e-124 357
MsG0680035579.01.T01 AT1G51740 75.000 220 54 1 55 273 26 245 1.85e-97 287

Find 96 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACTCTCACTCTTAATT+TGG 0.124603 6:+108702284 MsG0680035579.01.T01:CDS
GGCTAAATTGGCATCCATTT+TGG 0.167090 6:+108696166 MsG0680035579.01.T01:intron
CATTCCCTTGCAGGCTAAAT+TGG 0.188062 6:+108696154 MsG0680035579.01.T01:intron
GCGCCAAAGTGCTCGCTCTT+TGG 0.207362 6:+108695853 MsG0680035579.01.T01:CDS
CGCCAAAGTGCTCGCTCTTT+GGG 0.207777 6:+108695854 MsG0680035579.01.T01:CDS
AAGAGTCCAACAACAATTAT+TGG 0.233547 6:+108700060 MsG0680035579.01.T01:CDS
TAAGAACGTCAATTTGTTCT+TGG 0.235294 6:-108697617 None:intergenic
GGTTGAATTGTCTAGTCTTC+TGG 0.259554 6:+108700200 MsG0680035579.01.T01:intron
GCTTCCAGGATGCTATTAAT+AGG 0.268532 6:+108699927 MsG0680035579.01.T01:CDS
CTCCACATCACCTGAATTAG+AGG 0.273679 6:-108700002 None:intergenic
AGATTTGGGATATTCATAAA+TGG 0.305645 6:+108695790 MsG0680035579.01.T01:intron
AATTGTTGTTGGACTCTTAG+AGG 0.309547 6:-108700055 None:intergenic
TTCACTCTCACTCTTAATTT+GGG 0.332409 6:+108702285 MsG0680035579.01.T01:CDS
GAGGGCGGACTTGGTGGTGG+TGG 0.337288 6:-108693969 None:intergenic
TTTCCATCATCTTTCTTGAT+TGG 0.345337 6:+108701061 MsG0680035579.01.T01:CDS
TATAATGAAAGATGCCAAAA+TGG 0.350579 6:-108696180 None:intergenic
GCTCAGAGCTATACGCTTCC+AGG 0.362370 6:+108699913 MsG0680035579.01.T01:CDS
TGCCTGTTGTTGTGCGAGAC+TGG 0.374329 6:-108694007 None:intergenic
GGTTTCGGTAGAATCTTTCT+TGG 0.378300 6:-108699981 None:intergenic
TGATGAAACACGTGCCCTTC+AGG 0.388015 6:+108700084 MsG0680035579.01.T01:CDS
ATCACCTGAATTAGAGGTTT+CGG 0.389238 6:-108699996 None:intergenic
GACGGTGCAGAGGGCGGACT+TGG 0.392991 6:-108693978 None:intergenic
GTGAGAGTGAAATTACTTAG+AGG 0.397347 6:-108702273 None:intergenic
TCTACCGAAACCTCTAATTC+AGG 0.402249 6:+108699992 MsG0680035579.01.T01:CDS
GCGGACTTGGTGGTGGTGGG+CGG 0.403345 6:-108693965 None:intergenic
AGAGGCTGCCGCCGGTGGAT+TGG 0.403673 6:-108693939 None:intergenic
TAAATGCAGCTTTGGTGAAT+GGG 0.407250 6:-108696223 None:intergenic
GGCTCACTGCGCAACTCATC+AGG 0.410986 6:-108700034 None:intergenic
TCCCAGTCTCGCACAACAAC+AGG 0.411723 6:+108694005 MsG0680035579.01.T01:five_prime_UTR
TACCGTCTTAAATGCAGCTT+TGG 0.412852 6:-108696231 None:intergenic
CATCATCCAATAATTGTTGT+TGG 0.415152 6:-108700066 None:intergenic
GCTGCTGCTATTCCGCTGAA+TGG 0.427816 6:-108701001 None:intergenic
GGTGCAGAGGGCGGACTTGG+TGG 0.430762 6:-108693975 None:intergenic
TTAAATGCAGCTTTGGTGAA+TGG 0.436719 6:-108696224 None:intergenic
CTTCCAGGATGCTATTAATA+GGG 0.444913 6:+108699928 MsG0680035579.01.T01:CDS
GAAAACTCAAAAGGCTGGCT+TGG 0.445306 6:+108697663 MsG0680035579.01.T01:CDS
ATGAAAGTGTGTAGAGAGAA+AGG 0.466672 6:-108693893 None:intergenic
GGATTGGAAGGAGGCAGAAT+GGG 0.467214 6:-108693923 None:intergenic
GAAGGAGGCAGAATGGGAGA+TGG 0.470555 6:-108693917 None:intergenic
ATTCAGGTGATGTGGAGCTC+AGG 0.471442 6:+108700008 MsG0680035579.01.T01:CDS
TTGGTGAATGGGGACCTTTG+TGG 0.473649 6:-108696212 None:intergenic
CCATACCACGCCATGCTTGT+GGG 0.475193 6:-108697721 None:intergenic
AGGGCGGACTTGGTGGTGGT+GGG 0.477730 6:-108693968 None:intergenic
GCAGAGGGCGGACTTGGTGG+TGG 0.478916 6:-108693972 None:intergenic
AAGGAGGCAGAATGGGAGAT+GGG 0.483277 6:-108693916 None:intergenic
GAGAAAGGTTAGATGTGAGT+AGG 0.484150 6:-108693878 None:intergenic
GGCGGCTGAGAGGCTGCCGC+CGG 0.486195 6:-108693947 None:intergenic
ATACCAATCAAGAAAGATGA+TGG 0.495161 6:-108701064 None:intergenic
GGCTGAGAGGCTGCCGCCGG+TGG 0.499434 6:-108693944 None:intergenic
GCCTGTTGTTGTGCGAGACT+GGG 0.501486 6:-108694006 None:intergenic
TCCATACCACGCCATGCTTG+TGG 0.502783 6:-108697722 None:intergenic
AATGAAGAGGAAAACTCAAA+AGG 0.506163 6:+108697654 MsG0680035579.01.T01:CDS
GCAAAACATGTGTAGCCATC+AGG 0.513647 6:-108700275 None:intergenic
GCTGCCGCCGGTGGATTGGA+AGG 0.522158 6:-108693935 None:intergenic
AAGAGGAAAACTCAAAAGGC+TGG 0.526341 6:+108697658 MsG0680035579.01.T01:CDS
TGGATTGGAAGGAGGCAGAA+TGG 0.528675 6:-108693924 None:intergenic
CAAATTGTGCCGTAACTGAA+TGG 0.529742 6:-108699886 None:intergenic
GGTGGTGGTGGGCGGCTGAG+AGG 0.533607 6:-108693957 None:intergenic
AATTGAGCATTTGTATGACC+AGG 0.543557 6:+108700311 MsG0680035579.01.T01:CDS
GGGATATTCATAAATGGCAA+AGG 0.544568 6:+108695796 MsG0680035579.01.T01:exon
TTCATAAATGGCAAAGGCAA+GGG 0.545979 6:+108695802 MsG0680035579.01.T01:exon
ATGCTTGTGGGCAATGGTGT+CGG 0.546971 6:-108697709 None:intergenic
GTCTGCATTAAATCACCTGA+TGG 0.547748 6:+108700260 MsG0680035579.01.T01:CDS
AAATGGCAAAGGCAAGGGAT+AGG 0.548045 6:+108695807 MsG0680035579.01.T01:exon
TGAGAGACTCCATTCAGTTA+CGG 0.548485 6:+108699877 MsG0680035579.01.T01:CDS
TTCAGGTGATGTGGAGCTCA+GGG 0.551592 6:+108700009 MsG0680035579.01.T01:CDS
CACGCCATGCTTGTGGGCAA+TGG 0.554737 6:-108697715 None:intergenic
ATTCATAAATGGCAAAGGCA+AGG 0.557606 6:+108695801 MsG0680035579.01.T01:exon
GTGAATGGGGACCTTTGTGG+AGG 0.566054 6:-108696209 None:intergenic
GGAGGCAATGAAGATTGAAG+AGG 0.568391 6:-108702252 None:intergenic
GACACCATTGCCCACAAGCA+TGG 0.571273 6:+108697711 MsG0680035579.01.T01:CDS
TCTGCCTCCTTCCAATCCAC+CGG 0.574909 6:+108693928 MsG0680035579.01.T01:five_prime_UTR
TTGCCCTATTAATAGCATCC+TGG 0.576861 6:-108699931 None:intergenic
GAATAGTATAAACAATGAAG+AGG 0.577713 6:+108697641 MsG0680035579.01.T01:CDS
AACCTCTAATTCAGGTGATG+TGG 0.577854 6:+108700000 MsG0680035579.01.T01:CDS
TCAAGAAACTGAGACTAAGA+TGG 0.578113 6:+108700230 MsG0680035579.01.T01:CDS
TGGGACAGAGACGGTGCAGA+GGG 0.582740 6:-108693987 None:intergenic
ACCCCAAAGAGCGAGCACTT+TGG 0.584995 6:-108695856 None:intergenic
GCCAAAGTGCTCGCTCTTTG+GGG 0.585366 6:+108695855 MsG0680035579.01.T01:CDS
CACCAAAGCTGCATTTAAGA+CGG 0.589281 6:+108696229 MsG0680035579.01.T01:CDS
CTGGGACAGAGACGGTGCAG+AGG 0.592410 6:-108693988 None:intergenic
AAATGCAGCTTTGGTGAATG+GGG 0.596531 6:-108696222 None:intergenic
GACAGAGACGGTGCAGAGGG+CGG 0.601603 6:-108693984 None:intergenic
AACTCTCACAAGCCATTCAG+CGG 0.603751 6:+108700989 MsG0680035579.01.T01:CDS
GCTTGGCATTACAACTGCAA+AGG 0.607473 6:+108697680 MsG0680035579.01.T01:CDS
GCCGCCGGTGGATTGGAAGG+AGG 0.610015 6:-108693932 None:intergenic
ATCGATCTTTATCACCTGAA+GGG 0.621626 6:-108700098 None:intergenic
TCGCTCTTTGGGGTATGATG+AGG 0.630303 6:+108695865 MsG0680035579.01.T01:CDS
GCCTCCTTCCAATCCACCGG+CGG 0.631107 6:+108693931 MsG0680035579.01.T01:five_prime_UTR
AGAAACTGAGACTAAGATGG+TGG 0.631242 6:+108700233 MsG0680035579.01.T01:CDS
AGAGTGAAATTACTTAGAGG+AGG 0.635259 6:-108702270 None:intergenic
GACTGAGGACTTCAAAGATG+CGG 0.662570 6:+108695829 MsG0680035579.01.T01:CDS
CATTGCCCACAAGCATGGCG+TGG 0.688055 6:+108697716 MsG0680035579.01.T01:CDS
AAAGGCAAGGGATAGGACTG+AGG 0.694960 6:+108695814 MsG0680035579.01.T01:CDS
GTGCGAGACTGGGACAGAGA+CGG 0.704170 6:-108693996 None:intergenic
TTATACATAAACCTCCACAA+AGG 0.732414 6:+108696198 MsG0680035579.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTAATTAATATACAATAA+AGG - Chr6:108697505-108697524 None:intergenic 10.0%
!! ATAAAAAAAATGTCTTTAAT+TGG - Chr6:108701409-108701428 None:intergenic 10.0%
!! ATATATCATTTATTTATTTG+AGG + Chr6:108700158-108700177 MsG0680035579.01.T01:intron 10.0%
!! ATTACATGTATAAATTAAAT+AGG - Chr6:108697358-108697377 None:intergenic 10.0%
!! ATTTATATAATTGAGATTAT+GGG + Chr6:108694141-108694160 MsG0680035579.01.T01:intron 10.0%
!! CTTTAGATAAAAAATAATAT+AGG + Chr6:108696009-108696028 MsG0680035579.01.T01:intron 10.0%
!!! AGTAGTTAATATATTTTTAT+TGG + Chr6:108695710-108695729 MsG0680035579.01.T01:intron 10.0%
!!! CTATTATTTTGTTATTAATT+TGG + Chr6:108697566-108697585 MsG0680035579.01.T01:intron 10.0%
!!! GTAGTTAATATATTTTTATT+GGG + Chr6:108695711-108695730 MsG0680035579.01.T01:intron 10.0%
!!! TAATGTTAACTTAATTTTTT+AGG + Chr6:108699841-108699860 MsG0680035579.01.T01:intron 10.0%
!!! TATATTTTCTTTTCTATTTT+TGG + Chr6:108694863-108694882 MsG0680035579.01.T01:intron 10.0%
!!! TTTATAATGAAGTATTATTT+GGG + Chr6:108701342-108701361 MsG0680035579.01.T01:intron 10.0%
!!! TTTTATAATGAAGTATTATT+TGG + Chr6:108701341-108701360 MsG0680035579.01.T01:intron 10.0%
!!! TTTTATTTTTTGTTTTGTTT+TGG + Chr6:108701440-108701459 MsG0680035579.01.T01:intron 10.0%
!!! TTTTCTTTATAATTTTCTTA+TGG + Chr6:108698356-108698375 MsG0680035579.01.T01:intron 10.0%
!! AATAATTAGATAATATTGAC+TGG + Chr6:108696857-108696876 MsG0680035579.01.T01:intron 15.0%
!! CATTTATATAATTGAGATTA+TGG + Chr6:108694140-108694159 MsG0680035579.01.T01:intron 15.0%
!! GAGAATTTAGATAAAAATAT+AGG + Chr6:108698033-108698052 MsG0680035579.01.T01:intron 15.0%
!! TTATATTAAACAGAAATACA+AGG + Chr6:108698182-108698201 MsG0680035579.01.T01:intron 15.0%
!! TTATGAATAATATCTTCAAA+TGG + Chr6:108695107-108695126 MsG0680035579.01.T01:intron 15.0%
!!! ACTTTAAATTGATTTATTTC+AGG - Chr6:108700674-108700693 None:intergenic 15.0%
!!! TTATAATGAAGTATTATTTG+GGG + Chr6:108701343-108701362 MsG0680035579.01.T01:intron 15.0%
!!! TTTTCAATCATTAACTTATT+AGG + Chr6:108697760-108697779 MsG0680035579.01.T01:intron 15.0%
!!! TTTTTTATCTAAAGAAAGAT+AGG - Chr6:108696003-108696022 None:intergenic 15.0%
!! ACTGTATGAAAATAATACAA+AGG - Chr6:108700801-108700820 None:intergenic 20.0%
!! AGAAAAAAGATCAAATGAAA+TGG - Chr6:108695636-108695655 None:intergenic 20.0%
!! AGATCATGATTTGAATTATT+AGG - Chr6:108695961-108695980 None:intergenic 20.0%
!! AGTAAACTTTATGTATGTTT+AGG + Chr6:108695280-108695299 MsG0680035579.01.T01:intron 20.0%
!! ATAAAGCATAAAATGTTAGT+AGG - Chr6:108694944-108694963 None:intergenic 20.0%
!! ATGTTATGTTAAATGAGTAT+TGG - Chr6:108698746-108698765 None:intergenic 20.0%
!! ATTGAAATATAAGAAAAACC+CGG + Chr6:108701626-108701645 MsG0680035579.01.T01:intron 20.0%
!! ATTTGTTTGAATAGTTTATG+AGG + Chr6:108694502-108694521 MsG0680035579.01.T01:intron 20.0%
!! CAAATTAATCACTGTATAAT+TGG + Chr6:108696494-108696513 MsG0680035579.01.T01:intron 20.0%
!! CAATTATACAGTGATTAATT+TGG - Chr6:108696496-108696515 None:intergenic 20.0%
!! CTTATATATTACTCATAACA+TGG - Chr6:108694893-108694912 None:intergenic 20.0%
!! GAATATAATTTAGTAGAAAC+TGG + Chr6:108699328-108699347 MsG0680035579.01.T01:intron 20.0%
!! TAAGTTCTATTTATAGATTG+AGG - Chr6:108697274-108697293 None:intergenic 20.0%
!! TATATAAGCAAATTCAACTA+CGG + Chr6:108694905-108694924 MsG0680035579.01.T01:intron 20.0%
!! TATCATTATAAGATCACATT+GGG + Chr6:108697148-108697167 MsG0680035579.01.T01:intron 20.0%
!! TGAAAATAATACAAAGGATA+TGG - Chr6:108700795-108700814 None:intergenic 20.0%
!! TGATATATTGATAAAAGACT+TGG + Chr6:108701273-108701292 MsG0680035579.01.T01:intron 20.0%
!! TGATTTGAATTATTAGGAAT+AGG - Chr6:108695955-108695974 None:intergenic 20.0%
!! TGCATATATAATCAGTAATA+TGG - Chr6:108701151-108701170 None:intergenic 20.0%
!! TGTTTATTCAAATTCCATTA+CGG + Chr6:108696331-108696350 MsG0680035579.01.T01:intron 20.0%
!! TTCTATGCTTTAACAAAAAA+TGG - Chr6:108696716-108696735 None:intergenic 20.0%
!! TTGTACTAAATATAGTTTCA+TGG + Chr6:108696396-108696415 MsG0680035579.01.T01:intron 20.0%
!! TTTACTAAAATGCATACAAT+TGG + Chr6:108701842-108701861 MsG0680035579.01.T01:intron 20.0%
!!! AATAATAATGATAGTGATCA+AGG - Chr6:108696897-108696916 None:intergenic 20.0%
!!! ATTTTCAGTATTTTACTTCT+CGG - Chr6:108700699-108700718 None:intergenic 20.0%
!!! ATTTTCTTTTCTATTTTTGG+TGG + Chr6:108694866-108694885 MsG0680035579.01.T01:intron 20.0%
!!! ATTTTGTATAGCTTAAAGTT+GGG + Chr6:108694733-108694752 MsG0680035579.01.T01:intron 20.0%
!!! CATGAATTTTTATAGTATTG+TGG - Chr6:108697896-108697915 None:intergenic 20.0%
!!! CTATCATTATTATTTCTGAT+TGG + Chr6:108696903-108696922 MsG0680035579.01.T01:intron 20.0%
!!! TGAGTGATTAATTTTATGAA+GGG + Chr6:108701245-108701264 MsG0680035579.01.T01:intron 20.0%
!!! TGTTTTATATGAGTAAAATG+TGG + Chr6:108694438-108694457 MsG0680035579.01.T01:intron 20.0%
!!! TTGAGTGATTAATTTTATGA+AGG + Chr6:108701244-108701263 MsG0680035579.01.T01:intron 20.0%
!!! TTTATATTGATGATGTTTCA+AGG + Chr6:108694959-108694978 MsG0680035579.01.T01:intron 20.0%
!!! TTTTTTGTTAAAGCATAGAA+AGG + Chr6:108696716-108696735 MsG0680035579.01.T01:intron 20.0%
! AAAAGATAGAGACAAAAAAG+TGG + Chr6:108701716-108701735 MsG0680035579.01.T01:intron 25.0%
! AAAAGATCAAATGAAATGGA+TGG - Chr6:108695632-108695651 None:intergenic 25.0%
! AAAGATAGAGACAAAAAAGT+GGG + Chr6:108701717-108701736 MsG0680035579.01.T01:intron 25.0%
! AAAGATCAAATGAAATGGAT+GGG - Chr6:108695631-108695650 None:intergenic 25.0%
! AACGTTAAAACAGCAAATAA+CGG - Chr6:108702047-108702066 None:intergenic 25.0%
! AAGTTGTATTCTAACTTGAA+AGG - Chr6:108700125-108700144 None:intergenic 25.0%
! AATTAATCACTCAAATCGTT+TGG - Chr6:108701238-108701257 None:intergenic 25.0%
! AGAATATATGTTATCTAACC+TGG - Chr6:108700332-108700351 None:intergenic 25.0%
! AGTCAATTTAACACAATTAG+AGG - Chr6:108694117-108694136 None:intergenic 25.0%
! ATACAAAGGATATGGTTATT+AGG - Chr6:108700787-108700806 None:intergenic 25.0%
! ATATAAGCAAATTCAACTAC+GGG + Chr6:108694906-108694925 MsG0680035579.01.T01:intron 25.0%
! ATCTTAATTCATCATGTTGT+AGG + Chr6:108701510-108701529 MsG0680035579.01.T01:intron 25.0%
! ATGTATTTAGAGATTCCAAT+TGG + Chr6:108695658-108695677 MsG0680035579.01.T01:intron 25.0%
! ATTAAGATACTTAGTTAAGC+CGG - Chr6:108695422-108695441 None:intergenic 25.0%
! ATTAAGCTTCTCACAAATTT+AGG - Chr6:108700909-108700928 None:intergenic 25.0%
! CTAACTAAATTCTACTTCTT+AGG + Chr6:108697093-108697112 MsG0680035579.01.T01:intron 25.0%
! CTATCATTATAAGATCACAT+TGG + Chr6:108697147-108697166 MsG0680035579.01.T01:intron 25.0%
! GAAAATTCTTATTACAGCAT+AGG - Chr6:108698341-108698360 None:intergenic 25.0%
! GAATAGTATAAACAATGAAG+AGG + Chr6:108697641-108697660 MsG0680035579.01.T01:CDS 25.0%
! GATATGTTGAAGTAAAACAA+CGG + Chr6:108695236-108695255 MsG0680035579.01.T01:intron 25.0%
! GTTATTGTTTCATTAAGCAA+AGG + Chr6:108696600-108696619 MsG0680035579.01.T01:intron 25.0%
! TAAAGGAAAGTTGTATAGAA+AGG - Chr6:108697445-108697464 None:intergenic 25.0%
! TAAATTTGTGAGAAGCTTAA+TGG + Chr6:108700908-108700927 MsG0680035579.01.T01:intron 25.0%
! TAAGATTCGAATATAAGTGA+GGG - Chr6:108701496-108701515 None:intergenic 25.0%
! TAATATGAACTAATTGTACG+TGG - Chr6:108701663-108701682 None:intergenic 25.0%
! TACAAAGGATATGGTTATTA+GGG - Chr6:108700786-108700805 None:intergenic 25.0%
! TATAATAGTGAATGTGAGTT+AGG - Chr6:108695929-108695948 None:intergenic 25.0%
! TATAATGAAAGATGCCAAAA+TGG - Chr6:108696183-108696202 None:intergenic 25.0%
! TATGAACATTAACCAAGAAA+TGG - Chr6:108695371-108695390 None:intergenic 25.0%
! TTAAGATTCGAATATAAGTG+AGG - Chr6:108701497-108701516 None:intergenic 25.0%
! TTACTTAGAAACTACCTTAT+TGG - Chr6:108695265-108695284 None:intergenic 25.0%
! TTCATATACTTCAGAGTATA+CGG + Chr6:108699585-108699604 MsG0680035579.01.T01:intron 25.0%
! TTTATATGAGTAAAATGTGG+TGG + Chr6:108694441-108694460 MsG0680035579.01.T01:intron 25.0%
! TTTCTGATACGTTCAAAATT+CGG + Chr6:108694197-108694216 MsG0680035579.01.T01:intron 25.0%
!! AAGTTGAATTTTCACATACT+TGG + Chr6:108697214-108697233 MsG0680035579.01.T01:intron 25.0%
!! AGATTTGGGATATTCATAAA+TGG + Chr6:108695790-108695809 MsG0680035579.01.T01:intron 25.0%
!! ATGATTGATGATAACAGATT+TGG + Chr6:108695775-108695794 MsG0680035579.01.T01:intron 25.0%
!! GATTTTGTATAGCTTAAAGT+TGG + Chr6:108694732-108694751 MsG0680035579.01.T01:intron 25.0%
!! GGGTTTTTCTTATATTTCAA+TGG - Chr6:108701627-108701646 None:intergenic 25.0%
!! GTGACATTAGCTTAAAAAAT+AGG + Chr6:108695555-108695574 MsG0680035579.01.T01:intron 25.0%
!! GTTTATGAGGTAACAAATTT+TGG + Chr6:108694515-108694534 MsG0680035579.01.T01:intron 25.0%
!! TATATTCAACCAAACCATTT+TGG + Chr6:108699095-108699114 MsG0680035579.01.T01:intron 25.0%
!! TATCTACATATTTTGTCAAG+TGG + Chr6:108700420-108700439 MsG0680035579.01.T01:intron 25.0%
!! TCAATATATTCAGTTAGTCT+TGG - Chr6:108699663-108699682 None:intergenic 25.0%
!! TGATTGATGATAACAGATTT+GGG + Chr6:108695776-108695795 MsG0680035579.01.T01:intron 25.0%
!! TGTGAAAATTCAACTTTTAC+TGG - Chr6:108697210-108697229 None:intergenic 25.0%
!! TTGAATAAAACCTAGTTTGT+TGG - Chr6:108694699-108694718 None:intergenic 25.0%
!! TTTTCAGTATTTTACTTCTC+GGG - Chr6:108700698-108700717 None:intergenic 25.0%
!!! AAGATAGGATTTTTTTGCAA+AGG - Chr6:108695988-108696007 None:intergenic 25.0%
!!! AAGATTTTTTTTTTGACCGA+CGG - Chr6:108700758-108700777 None:intergenic 25.0%
!!! CATTGATATTTTAACACTTC+TGG + Chr6:108696261-108696280 MsG0680035579.01.T01:intron 25.0%
!!! GTTTTTCTAGTTTCTTACAA+AGG - Chr6:108695581-108695600 None:intergenic 25.0%
!!! TATTATTTCTGATTGGTTCT+TGG + Chr6:108696910-108696929 MsG0680035579.01.T01:intron 25.0%
!!! TGTTTATGTTTCTGTTTTTG+TGG + Chr6:108700377-108700396 MsG0680035579.01.T01:intron 25.0%
!!! TGTTTTTGTGGATCTTTTAA+GGG + Chr6:108700389-108700408 MsG0680035579.01.T01:intron 25.0%
!!! TTAGGTATTTATTTTCTGCA+CGG + Chr6:108697778-108697797 MsG0680035579.01.T01:intron 25.0%
!!! TTGGATCTGAAATTCATTTT+AGG + Chr6:108698845-108698864 MsG0680035579.01.T01:intron 25.0%
!!! TTTTGTTATTAATTTGGTGC+AGG + Chr6:108697572-108697591 MsG0680035579.01.T01:intron 25.0%
AAAACAGCAAATAACGGTAT+CGG - Chr6:108702041-108702060 None:intergenic 30.0%
AACCAACCAAACAAAAAGAA+GGG - Chr6:108700358-108700377 None:intergenic 30.0%
AAGAAGTTTGATATGCGAAA+TGG + Chr6:108697327-108697346 MsG0680035579.01.T01:intron 30.0%
AAGAGTCCAACAACAATTAT+TGG + Chr6:108700060-108700079 MsG0680035579.01.T01:CDS 30.0%
AATGAAGAGGAAAACTCAAA+AGG + Chr6:108697654-108697673 MsG0680035579.01.T01:CDS 30.0%
AATTTATTTAGTGTGGCATG+AGG + Chr6:108698937-108698956 MsG0680035579.01.T01:intron 30.0%
ACAAAGGATATGGTTATTAG+GGG - Chr6:108700785-108700804 None:intergenic 30.0%
ACAATTCAACCTACATGATA+AGG - Chr6:108700191-108700210 None:intergenic 30.0%
ACTGTTACATTCATGAATTG+AGG + Chr6:108699797-108699816 MsG0680035579.01.T01:intron 30.0%
AGATCCAATGAGTGTATATT+TGG - Chr6:108698833-108698852 None:intergenic 30.0%
AGCATAAAATGTTAGTAGGA+AGG - Chr6:108694940-108694959 None:intergenic 30.0%
AGGAAAGAAATAGATCACAT+AGG + Chr6:108700554-108700573 MsG0680035579.01.T01:intron 30.0%
AGGTAGGAATTTATTTAGTG+TGG + Chr6:108698930-108698949 MsG0680035579.01.T01:intron 30.0%
ATAAGCTACTTCAATAAGCT+AGG + Chr6:108700472-108700491 MsG0680035579.01.T01:intron 30.0%
ATAATTAGATTGCAGCTGAA+CGG + Chr6:108698963-108698982 MsG0680035579.01.T01:intron 30.0%
ATACCAATCAAGAAAGATGA+TGG - Chr6:108701067-108701086 None:intergenic 30.0%
ATATAGAGTAAGTGAAACAG+TGG + Chr6:108695162-108695181 MsG0680035579.01.T01:intron 30.0%
ATCCAATGAGTGTATATTTG+GGG - Chr6:108698831-108698850 None:intergenic 30.0%
ATTATTAGGGTTACTCGATT+TGG + Chr6:108694076-108694095 MsG0680035579.01.T01:intron 30.0%
CATAAAGAGAGATGACTTAA+AGG - Chr6:108697462-108697481 None:intergenic 30.0%
CATCATCCAATAATTGTTGT+TGG - Chr6:108700069-108700088 None:intergenic 30.0%
CCTGATATTTACACATTAGA+GGG + Chr6:108701198-108701217 MsG0680035579.01.T01:intron 30.0%
CTTTAAGTCATCTCTCTTTA+TGG + Chr6:108697460-108697479 MsG0680035579.01.T01:intron 30.0%
GATCCAATGAGTGTATATTT+GGG - Chr6:108698832-108698851 None:intergenic 30.0%
GGAAAGAAATAGATCACATA+GGG + Chr6:108700555-108700574 MsG0680035579.01.T01:intron 30.0%
GTAGATAGAGTAGTTGTTAA+AGG - Chr6:108699706-108699725 None:intergenic 30.0%
TAAAACAACGGTTTCCAATA+AGG + Chr6:108695248-108695267 MsG0680035579.01.T01:intron 30.0%
TAAAGGAATTGCAAACACAT+TGG - Chr6:108697488-108697507 None:intergenic 30.0%
TAAATTCCTACCTCATAACA+AGG - Chr6:108698923-108698942 None:intergenic 30.0%
TAACTAGCATTGTCAAATAG+TGG - Chr6:108696460-108696479 None:intergenic 30.0%
TAGATCAATCTTATTCTGGT+TGG + Chr6:108696100-108696119 MsG0680035579.01.T01:intron 30.0%
TAGGATGAGAAATGAATTGA+GGG - Chr6:108695910-108695929 None:intergenic 30.0%
TCATGTAACATTTCTGTGAT+AGG + Chr6:108695021-108695040 MsG0680035579.01.T01:intron 30.0%
TCCAACGATCATAGTTAATA+TGG - Chr6:108695509-108695528 None:intergenic 30.0%
TCCTGATATTTACACATTAG+AGG + Chr6:108701197-108701216 MsG0680035579.01.T01:intron 30.0%
TGACAAATCGAGTGTATAAA+CGG - Chr6:108701317-108701336 None:intergenic 30.0%
TGATGGTATATAGTGAGTAT+CGG + Chr6:108695478-108695497 MsG0680035579.01.T01:intron 30.0%
TGTAGTTGGCAATAAGAAAT+TGG - Chr6:108700878-108700897 None:intergenic 30.0%
TTAATTCATCATGTTGTAGG+AGG + Chr6:108701513-108701532 MsG0680035579.01.T01:intron 30.0%
TTAGGATGAGAAATGAATTG+AGG - Chr6:108695911-108695930 None:intergenic 30.0%
TTATACATAAACCTCCACAA+AGG + Chr6:108696198-108696217 MsG0680035579.01.T01:CDS 30.0%
TTATTAGGGTTACTCGATTT+GGG + Chr6:108694077-108694096 MsG0680035579.01.T01:intron 30.0%
TTCACTCTCACTCTTAATTT+GGG + Chr6:108702285-108702304 MsG0680035579.01.T01:CDS 30.0%
TTCCTATCAATGTAACAGAA+AGG - Chr6:108695188-108695207 None:intergenic 30.0%
TTCTAGTGTAGTAAGATAAC+TGG + Chr6:108700852-108700871 MsG0680035579.01.T01:intron 30.0%
TTCTGATACGTTCAAAATTC+GGG + Chr6:108694198-108694217 MsG0680035579.01.T01:intron 30.0%
TTGCTAGATCAATCTTATTC+TGG + Chr6:108696096-108696115 MsG0680035579.01.T01:intron 30.0%
TTGGAGATTCAACAAAATCA+CGG + Chr6:108694615-108694634 MsG0680035579.01.T01:intron 30.0%
TTTCAAGATTCATGATACTG+AGG - Chr6:108696051-108696070 None:intergenic 30.0%
TTTCACTCTCACTCTTAATT+TGG + Chr6:108702284-108702303 MsG0680035579.01.T01:CDS 30.0%
TTTCCATCATCTTTCTTGAT+TGG + Chr6:108701061-108701080 MsG0680035579.01.T01:CDS 30.0%
! AATTCACAAACCAATTTGCT+AGG - Chr6:108697049-108697068 None:intergenic 30.0%
! AATTTTTCTGCATGTTTCGT+TGG + Chr6:108700829-108700848 MsG0680035579.01.T01:intron 30.0%
! ACATAGAAGAAGTGCAAAAT+AGG + Chr6:108698706-108698725 MsG0680035579.01.T01:intron 30.0%
! ATACGATTAAGTTTTCTTCG+TGG - Chr6:108699959-108699978 None:intergenic 30.0%
! ATGTCATTATTGCTAGTTTC+AGG + Chr6:108699441-108699460 MsG0680035579.01.T01:intron 30.0%
! ATTTTCTTATGGACATAGAC+TGG + Chr6:108698367-108698386 MsG0680035579.01.T01:intron 30.0%
! CATTTTACTTCCATCCTAAA+GGG + Chr6:108697174-108697193 MsG0680035579.01.T01:intron 30.0%
! GATGAATAGACTTTGTTTCT+TGG + Chr6:108697379-108697398 MsG0680035579.01.T01:intron 30.0%
! GGATTTTGTGATTGTTTGTT+GGG + Chr6:108694219-108694238 MsG0680035579.01.T01:intron 30.0%
! GTTCCTGTATTTAAAACCTT+GGG - Chr6:108701976-108701995 None:intergenic 30.0%
! TAAGAACGTCAATTTGTTCT+TGG - Chr6:108697620-108697639 None:intergenic 30.0%
! TATCTTTTCAGAGATAGTCT+AGG - Chr6:108701704-108701723 None:intergenic 30.0%
! TCATTTTACTTCCATCCTAA+AGG + Chr6:108697173-108697192 MsG0680035579.01.T01:intron 30.0%
! TGTTCATAATTGCTCAGTTT+TGG + Chr6:108695383-108695402 MsG0680035579.01.T01:intron 30.0%
! TTGACAATGCTAGTTACTTT+AGG + Chr6:108696464-108696483 MsG0680035579.01.T01:intron 30.0%
! TTTAGGATACACATTGTAGT+TGG - Chr6:108700892-108700911 None:intergenic 30.0%
! TTTAGTAGAAACTGGAGTTT+TGG + Chr6:108699336-108699355 MsG0680035579.01.T01:intron 30.0%
!! GATTTTGTGATTGTTTGTTG+GGG + Chr6:108694220-108694239 MsG0680035579.01.T01:intron 30.0%
!! TTTCAGGTTGTCATTCATTT+AGG - Chr6:108700658-108700677 None:intergenic 30.0%
!!! AGATTTTTTTTTTGACCGAC+GGG - Chr6:108700757-108700776 None:intergenic 30.0%
!!! CTGTTTTTGTGGATCTTTTA+AGG + Chr6:108700388-108700407 MsG0680035579.01.T01:intron 30.0%
!!! TTTGCTGTTTTAACGTTAAG+AGG + Chr6:108702050-108702069 MsG0680035579.01.T01:intron 30.0%
AAAGTTGCTCTATTGAACTC+TGG + Chr6:108697934-108697953 MsG0680035579.01.T01:intron 35.0%
AACCCCAAATATACACTCAT+TGG + Chr6:108698826-108698845 MsG0680035579.01.T01:intron 35.0%
AACCTGATATGGTAGTATTC+TGG + Chr6:108698644-108698663 MsG0680035579.01.T01:intron 35.0%
AATCGAGTGTATAAACGGTT+AGG - Chr6:108701312-108701331 None:intergenic 35.0%
AATCGATCTTTATCACCTGA+AGG - Chr6:108700102-108700121 None:intergenic 35.0%
AATTGAGCATTTGTATGACC+AGG + Chr6:108700311-108700330 MsG0680035579.01.T01:CDS 35.0%
AATTGATCACTCACACCTTT+AGG - Chr6:108701824-108701843 None:intergenic 35.0%
ACGATCATAGTTAATATGGC+AGG - Chr6:108695505-108695524 None:intergenic 35.0%
ACGTGAGAATGTTTGATGAA+TGG + Chr6:108695324-108695343 MsG0680035579.01.T01:intron 35.0%
ACTAGCACATCTAACCAAAA+TGG - Chr6:108699112-108699131 None:intergenic 35.0%
AGAGTGAAATTACTTAGAGG+AGG - Chr6:108702273-108702292 None:intergenic 35.0%
ATAAGCTAGGTGGTTTGAAA+AGG + Chr6:108700485-108700504 MsG0680035579.01.T01:intron 35.0%
ATAGAGACAAAAAAGTGGGA+GGG + Chr6:108701721-108701740 MsG0680035579.01.T01:intron 35.0%
ATATACTTCAGAGTATACGG+TGG + Chr6:108699588-108699607 MsG0680035579.01.T01:intron 35.0%
ATCACCTGAATTAGAGGTTT+CGG - Chr6:108699999-108700018 None:intergenic 35.0%
ATCGATCTTTATCACCTGAA+GGG - Chr6:108700101-108700120 None:intergenic 35.0%
ATGTTTGATGAATGGATGCA+TGG + Chr6:108695332-108695351 MsG0680035579.01.T01:intron 35.0%
ATTCATAAATGGCAAAGGCA+AGG + Chr6:108695801-108695820 MsG0680035579.01.T01:exon 35.0%
ATTGATAAAAGACTTGGACG+TGG + Chr6:108701279-108701298 MsG0680035579.01.T01:intron 35.0%
ATTGATCACTCACACCTTTA+GGG - Chr6:108701823-108701842 None:intergenic 35.0%
ATTTCTGTGATAGGAGGAAT+AGG + Chr6:108695030-108695049 MsG0680035579.01.T01:intron 35.0%
CAAATTCATTGAGAATGCAC+AGG + Chr6:108699149-108699168 MsG0680035579.01.T01:intron 35.0%
CAACCAACCAAACAAAAAGA+AGG - Chr6:108700359-108700378 None:intergenic 35.0%
CAATCACTCAAACTCTAACA+TGG - Chr6:108699493-108699512 None:intergenic 35.0%
CACATCTAACCAAAATGGTT+TGG - Chr6:108699107-108699126 None:intergenic 35.0%
CCCTCTAATGTGTAAATATC+AGG - Chr6:108701201-108701220 None:intergenic 35.0%
CTATCCAAGATTGACAACAA+CGG - Chr6:108694280-108694299 None:intergenic 35.0%
CTGTGCATTCTCAATGAATT+TGG - Chr6:108699151-108699170 None:intergenic 35.0%
CTGTTATCATCAATCATCAG+TGG - Chr6:108695772-108695791 None:intergenic 35.0%
CTTCAGTTAGCTATGATATC+AGG - Chr6:108698121-108698140 None:intergenic 35.0%
CTTCCAGGATGCTATTAATA+GGG + Chr6:108699928-108699947 MsG0680035579.01.T01:CDS 35.0%
GAAAGTTGTATAGAAAGGTG+AGG - Chr6:108697440-108697459 None:intergenic 35.0%
GAAGAAAGTTAGAGAGATGA+GGG + Chr6:108700512-108700531 MsG0680035579.01.T01:intron 35.0%
GAGGTAATTAGAGTTGAACA+AGG + Chr6:108700534-108700553 MsG0680035579.01.T01:intron 35.0%
GCCATATTAACTATGATCGT+TGG + Chr6:108695505-108695524 MsG0680035579.01.T01:intron 35.0%
GCGTAATTAACAATGTTTCG+CGG - Chr6:108702177-108702196 None:intergenic 35.0%
GCTACTAAAAATGTTGAGCT+TGG + Chr6:108700958-108700977 MsG0680035579.01.T01:CDS 35.0%
GCTGCGATTCTCAATTATTA+GGG + Chr6:108694063-108694082 MsG0680035579.01.T01:intron 35.0%
GGATTGTTGCAAAACTAGAT+GGG + Chr6:108698455-108698474 MsG0680035579.01.T01:intron 35.0%
GGGATATTCATAAATGGCAA+AGG + Chr6:108695796-108695815 MsG0680035579.01.T01:exon 35.0%
GTGAGAGTGAAATTACTTAG+AGG - Chr6:108702276-108702295 None:intergenic 35.0%
GTGCAAAATAGGATTGGATA+TGG + Chr6:108698717-108698736 MsG0680035579.01.T01:intron 35.0%
GTTTAGCGAATGTGTTATGT+GGG - Chr6:108697832-108697851 None:intergenic 35.0%
TACTAAGAGAGACAACCAAT+TGG + Chr6:108698314-108698333 MsG0680035579.01.T01:intron 35.0%
TAGACTTGCATAACCTGATA+TGG + Chr6:108698633-108698652 MsG0680035579.01.T01:intron 35.0%
TAGATGTGCTAGTCAATCTA+TGG + Chr6:108699119-108699138 MsG0680035579.01.T01:intron 35.0%
TATACTTCAGAGTATACGGT+GGG + Chr6:108699589-108699608 MsG0680035579.01.T01:intron 35.0%
TATAGGCATATAGCTTGAAG+AGG + Chr6:108698050-108698069 MsG0680035579.01.T01:intron 35.0%
TATTACAGCATAGGACCAAT+TGG - Chr6:108698332-108698351 None:intergenic 35.0%
TATTCTGGTCATAGAGATGA+TGG + Chr6:108698659-108698678 MsG0680035579.01.T01:intron 35.0%
TCAAGAAACTGAGACTAAGA+TGG + Chr6:108700230-108700249 MsG0680035579.01.T01:CDS 35.0%
TCAATATCTTTATACCCCGT+CGG + Chr6:108700739-108700758 MsG0680035579.01.T01:intron 35.0%
TGCTGCGATTCTCAATTATT+AGG + Chr6:108694062-108694081 MsG0680035579.01.T01:intron 35.0%
TGGAGATTCAACAAAATCAC+GGG + Chr6:108694616-108694635 MsG0680035579.01.T01:intron 35.0%
TGGATTGTTGCAAAACTAGA+TGG + Chr6:108698454-108698473 MsG0680035579.01.T01:intron 35.0%
TGTAACATTTCTGTGATAGG+AGG + Chr6:108695024-108695043 MsG0680035579.01.T01:intron 35.0%
TGTACTAAATAGCGTATCAC+AGG + Chr6:108694343-108694362 MsG0680035579.01.T01:intron 35.0%
TGTTTAGCGAATGTGTTATG+TGG - Chr6:108697833-108697852 None:intergenic 35.0%
TTATCATCAATCATCAGTGG+AGG - Chr6:108695769-108695788 None:intergenic 35.0%
TTCATAAATGGCAAAGGCAA+GGG + Chr6:108695802-108695821 MsG0680035579.01.T01:exon 35.0%
TTCATGTTTGGATTCACGAT+GGG + Chr6:108694544-108694563 MsG0680035579.01.T01:intron 35.0%
TTGATAAAAGACTTGGACGT+GGG + Chr6:108701280-108701299 MsG0680035579.01.T01:intron 35.0%
TTGATTCAGTCTCAAGTTCA+AGG + Chr6:108700597-108700616 MsG0680035579.01.T01:intron 35.0%
TTGGTCTGAACATGTAAAAC+TGG + Chr6:108698406-108698425 MsG0680035579.01.T01:intron 35.0%
TTGTTGTCAATCTTGGATAG+CGG + Chr6:108694280-108694299 MsG0680035579.01.T01:intron 35.0%
TTTAGCGAATGTGTTATGTG+GGG - Chr6:108697831-108697850 None:intergenic 35.0%
! AATTGTTGTTGGACTCTTAG+AGG - Chr6:108700058-108700077 None:intergenic 35.0%
! AGTGCAAAAGCTAAGTATTG+AGG - Chr6:108698553-108698572 None:intergenic 35.0%
! ATAATGATAGTGATCAAGGC+AGG - Chr6:108696893-108696912 None:intergenic 35.0%
! ATGAAAGTGTGTAGAGAGAA+AGG - Chr6:108693896-108693915 None:intergenic 35.0%
! CAATCTTATTCTGGTTGGTT+TGG + Chr6:108696105-108696124 MsG0680035579.01.T01:intron 35.0%
! CGTTCCTGTATTTAAAACCT+TGG - Chr6:108701977-108701996 None:intergenic 35.0%
! CTGATGTATGTGTGGATTAA+CGG - Chr6:108694666-108694685 None:intergenic 35.0%
! GAAGAAGTGCAAAATAGGAT+TGG + Chr6:108698711-108698730 MsG0680035579.01.T01:intron 35.0%
! GGGATTTTGTGATTGTTTGT+TGG + Chr6:108694218-108694237 MsG0680035579.01.T01:intron 35.0%
! GTAGTACTTGCCATTTGTAT+CGG - Chr6:108699729-108699748 None:intergenic 35.0%
! GTTCTTAGATCCTTGTTATG+AGG + Chr6:108698910-108698929 MsG0680035579.01.T01:intron 35.0%
! TAAATGCAGCTTTGGTGAAT+GGG - Chr6:108696226-108696245 None:intergenic 35.0%
! TAGCTACTTTAAGCCTCTTA+AGG - Chr6:108699633-108699652 None:intergenic 35.0%
! TAGTACTTGCCATTTGTATC+GGG - Chr6:108699728-108699747 None:intergenic 35.0%
! TCTTCTCCCTTCTTTTTGTT+TGG + Chr6:108700349-108700368 MsG0680035579.01.T01:intron 35.0%
! TTAAATGCAGCTTTGGTGAA+TGG - Chr6:108696227-108696246 None:intergenic 35.0%
! TTAGATCCTTGTTATGAGGT+AGG + Chr6:108698914-108698933 MsG0680035579.01.T01:intron 35.0%
! TTTATGAGAACCCTTTAGGA+TGG - Chr6:108697187-108697206 None:intergenic 35.0%
!! AAAACCTAGTTTGTTGGATG+TGG - Chr6:108694693-108694712 None:intergenic 35.0%
!! AAACCTAGTTTGTTGGATGT+GGG - Chr6:108694692-108694711 None:intergenic 35.0%
!! TACAAAGTGTTGTCAAACAG+TGG - Chr6:108696381-108696400 None:intergenic 35.0%
!! TCAATACTTAGCTTTTGCAC+TGG + Chr6:108698552-108698571 MsG0680035579.01.T01:intron 35.0%
!! TGAGTTTTGGTACCATTTCT+TGG + Chr6:108695356-108695375 MsG0680035579.01.T01:intron 35.0%
!! TTTTGGCTGATGTTCATGTT+TGG + Chr6:108694532-108694551 MsG0680035579.01.T01:intron 35.0%
!!! ATTTGGGTGTTGTTTTGTAG+AGG + Chr6:108702301-108702320 MsG0680035579.01.T01:CDS 35.0%
!!! GATTTTTTTTTTGACCGACG+GGG - Chr6:108700756-108700775 None:intergenic 35.0%
!!! GGAGTTTTGGATGAACTAAT+AGG + Chr6:108699349-108699368 MsG0680035579.01.T01:intron 35.0%
!!! GGCTTTTTTCCTTATCATGT+AGG + Chr6:108700179-108700198 MsG0680035579.01.T01:intron 35.0%
AACACCGTTGTTGTCAATCT+TGG + Chr6:108694273-108694292 MsG0680035579.01.T01:intron 40.0%
AACCTCTAATTCAGGTGATG+TGG + Chr6:108700000-108700019 MsG0680035579.01.T01:CDS 40.0%
AACTAATAGGATAGCCAGAG+AGG + Chr6:108699362-108699381 MsG0680035579.01.T01:intron 40.0%
AAGAGGAAAACTCAAAAGGC+TGG + Chr6:108697658-108697677 MsG0680035579.01.T01:CDS 40.0%
AAGGTATGCCAGTATCCTTA+TGG + Chr6:108701886-108701905 MsG0680035579.01.T01:intron 40.0%
AATAGTGGCACTATAGCGTA+CGG - Chr6:108696445-108696464 None:intergenic 40.0%
AATCAAGTGTCTGTGTTCCA+AGG + Chr6:108694987-108695006 MsG0680035579.01.T01:intron 40.0%
ACAACCTTCCATAAGGATAC+TGG - Chr6:108701897-108701916 None:intergenic 40.0%
ACATGTGACAATTGCTAACG+AGG - Chr6:108694824-108694843 None:intergenic 40.0%
ACATGTTCAGACCAAGCATA+TGG - Chr6:108698401-108698420 None:intergenic 40.0%
ACCAAAAATGTTTCCACGAC+AGG + Chr6:108699251-108699270 MsG0680035579.01.T01:intron 40.0%
AGAAACTGAGACTAAGATGG+TGG + Chr6:108700233-108700252 MsG0680035579.01.T01:CDS 40.0%
AGAGGATTTACGTCACCAAT+GGG + Chr6:108699380-108699399 MsG0680035579.01.T01:intron 40.0%
AGCAACATTGCAACTGTACA+AGG + Chr6:108698153-108698172 MsG0680035579.01.T01:intron 40.0%
AGCTACTTCAATAAGCTAGG+TGG + Chr6:108700475-108700494 MsG0680035579.01.T01:intron 40.0%
AGTGGTTACAACCTTCCATA+AGG - Chr6:108701904-108701923 None:intergenic 40.0%
ATATAGCTTGAAGAGGCCTA+AGG + Chr6:108698057-108698076 MsG0680035579.01.T01:intron 40.0%
ATGGGAGACAGTTAGTAACT+AGG - Chr6:108698214-108698233 None:intergenic 40.0%
CAAATTGTGCCGTAACTGAA+TGG - Chr6:108699889-108699908 None:intergenic 40.0%
CAATCCAAGTGCAGTTTCAA+TGG - Chr6:108698441-108698460 None:intergenic 40.0%
CAATCTCTTAACCGAACTAC+AGG - Chr6:108698495-108698514 None:intergenic 40.0%
CACCAAAGCTGCATTTAAGA+CGG + Chr6:108696229-108696248 MsG0680035579.01.T01:CDS 40.0%
CACTACTGCTGAGATTCTTT+GGG - Chr6:108698520-108698539 None:intergenic 40.0%
CAGATGCTCTTGCCAAAAAT+GGG - Chr6:108701785-108701804 None:intergenic 40.0%
CATCCTTAAATGCACAGATG+CGG + Chr6:108698763-108698782 MsG0680035579.01.T01:intron 40.0%
CCAAGAACTTGATGTAGTCA+CGG - Chr6:108699192-108699211 None:intergenic 40.0%
CGAGCTACTAACAACAAACA+AGG - Chr6:108696674-108696693 None:intergenic 40.0%
CGATATCAGCCGTTACAAAA+CGG + Chr6:108702003-108702022 MsG0680035579.01.T01:intron 40.0%
CGATGTAGAAATGCAGGATA+TGG + Chr6:108699748-108699767 MsG0680035579.01.T01:intron 40.0%
CTAAAAACGACATACAGACC+AGG - Chr6:108695692-108695711 None:intergenic 40.0%
CTAGGTGGTTTGAAAAGGTT+AGG + Chr6:108700490-108700509 MsG0680035579.01.T01:intron 40.0%
CTCTATCTACCCGATACAAA+TGG + Chr6:108699716-108699735 MsG0680035579.01.T01:intron 40.0%
CTGGTTTATGAGAACCCTTT+AGG - Chr6:108697191-108697210 None:intergenic 40.0%
CTTTCAGTGTTGTCAATCGT+TGG + Chr6:108696294-108696313 MsG0680035579.01.T01:intron 40.0%
GAACTAATTGTACGTGGTTC+CGG - Chr6:108701657-108701676 None:intergenic 40.0%
GAACTCTGGTTACTGAAACT+TGG + Chr6:108697948-108697967 MsG0680035579.01.T01:intron 40.0%
GAAGATGAAGTGGTAGATGA+AGG + Chr6:108698681-108698700 MsG0680035579.01.T01:intron 40.0%
GACCAGAATACTACCATATC+AGG - Chr6:108698649-108698668 None:intergenic 40.0%
GAGAAAGGTTAGATGTGAGT+AGG - Chr6:108693881-108693900 None:intergenic 40.0%
GAGGATGCAAACAAGTCAAT+GGG - Chr6:108697421-108697440 None:intergenic 40.0%
GATAGAGACAAAAAAGTGGG+AGG + Chr6:108701720-108701739 MsG0680035579.01.T01:intron 40.0%
GCAAAAACTGAGATCCCATT+AGG + Chr6:108699011-108699030 MsG0680035579.01.T01:intron 40.0%
GCAACATTGCAACTGTACAA+GGG + Chr6:108698154-108698173 MsG0680035579.01.T01:intron 40.0%
GCTATAACGTTGTACCGTAA+TGG - Chr6:108696348-108696367 None:intergenic 40.0%
GCTGTAACAGCGATACATAA+CGG - Chr6:108702094-108702113 None:intergenic 40.0%
GCTTCCAGGATGCTATTAAT+AGG + Chr6:108699927-108699946 MsG0680035579.01.T01:CDS 40.0%
GGAAGAAAGTTAGAGAGATG+AGG + Chr6:108700511-108700530 MsG0680035579.01.T01:intron 40.0%
GGAGAAAGGATCACAAAATC+TGG + Chr6:108698276-108698295 MsG0680035579.01.T01:intron 40.0%
GGAGATTCAACAAAATCACG+GGG + Chr6:108694617-108694636 MsG0680035579.01.T01:intron 40.0%
GGCCTTTCTGTTACATTGAT+AGG + Chr6:108695183-108695202 MsG0680035579.01.T01:intron 40.0%
GGGTTATCACACAATCACAA+AGG - Chr6:108698811-108698830 None:intergenic 40.0%
GGTTGTAGATCTTAGACTCT+TGG + Chr6:108699413-108699432 MsG0680035579.01.T01:intron 40.0%
GGTTTCGGTAGAATCTTTCT+TGG - Chr6:108699984-108700003 None:intergenic 40.0%
GTACTACGATGTAGAAATGC+AGG + Chr6:108699742-108699761 MsG0680035579.01.T01:intron 40.0%
GTATACGGTGGGTATTCTAT+AGG + Chr6:108699600-108699619 MsG0680035579.01.T01:intron 40.0%
GTATACTGTGCTGTAATCTG+AGG + Chr6:108699224-108699243 MsG0680035579.01.T01:intron 40.0%
GTCTGCATTAAATCACCTGA+TGG + Chr6:108700260-108700279 MsG0680035579.01.T01:CDS 40.0%
GTTCATGTTTGGATTCACGA+TGG + Chr6:108694543-108694562 MsG0680035579.01.T01:intron 40.0%
TACCGTCTTAAATGCAGCTT+TGG - Chr6:108696234-108696253 None:intergenic 40.0%
TAGAGACAAAAAAGTGGGAG+GGG + Chr6:108701722-108701741 MsG0680035579.01.T01:intron 40.0%
TAGCTTCAACAGCCTGTAAA+AGG - Chr6:108700942-108700961 None:intergenic 40.0%
TAGCTTGACAGAAATAGTGC+AGG + Chr6:108699286-108699305 MsG0680035579.01.T01:intron 40.0%
TATAGGCACTAAGCCTTAAG+AGG + Chr6:108699617-108699636 MsG0680035579.01.T01:intron 40.0%
TATGCCAGTATCCTTATGGA+AGG + Chr6:108701890-108701909 MsG0680035579.01.T01:intron 40.0%
TCTACCGAAACCTCTAATTC+AGG + Chr6:108699992-108700011 MsG0680035579.01.T01:CDS 40.0%
TGAGAGACTCCATTCAGTTA+CGG + Chr6:108699877-108699896 MsG0680035579.01.T01:CDS 40.0%
TGAGGATGCAAACAAGTCAA+TGG - Chr6:108697422-108697441 None:intergenic 40.0%
TGGATCTAACTCCATATGCT+TGG + Chr6:108698387-108698406 MsG0680035579.01.T01:intron 40.0%
TGTGATCCTTTCTCCAAACT+CGG - Chr6:108698271-108698290 None:intergenic 40.0%
TTCCACGACAGGAAAATTGA+CGG + Chr6:108699262-108699281 MsG0680035579.01.T01:intron 40.0%
TTCTTTCACCGAGGTAATGT+TGG + Chr6:108701464-108701483 MsG0680035579.01.T01:intron 40.0%
TTGCCCTATTAATAGCATCC+TGG - Chr6:108699934-108699953 None:intergenic 40.0%
TTGTCAAACAGTGGCTACAA+CGG - Chr6:108696372-108696391 None:intergenic 40.0%
TTTGGACTTTGACTCTTGTG+TGG + Chr6:108696123-108696142 MsG0680035579.01.T01:intron 40.0%
! AAAGCTGCATTTAAGACGGT+AGG + Chr6:108696233-108696252 MsG0680035579.01.T01:intron 40.0%
! AAATGCAGCTTTGGTGAATG+GGG - Chr6:108696225-108696244 None:intergenic 40.0%
! ATGGATGCATGGTTGAGTTT+TGG + Chr6:108695343-108695362 MsG0680035579.01.T01:intron 40.0%
! ATGTATGTGTGGATTAACGG+TGG - Chr6:108694663-108694682 None:intergenic 40.0%
! CTGCCTATACCGTTTTGTAA+CGG - Chr6:108702015-108702034 None:intergenic 40.0%
! GGCTAAATTGGCATCCATTT+TGG + Chr6:108696166-108696185 MsG0680035579.01.T01:intron 40.0%
! GGTTGAATTGTCTAGTCTTC+TGG + Chr6:108700200-108700219 MsG0680035579.01.T01:intron 40.0%
! TCCTGTCGTGGAAACATTTT+TGG - Chr6:108699255-108699274 None:intergenic 40.0%
! TGTATGTGTGGATTAACGGT+GGG - Chr6:108694662-108694681 None:intergenic 40.0%
! TGTTAGTAGCTCGAGAGTAT+TGG + Chr6:108696681-108696700 MsG0680035579.01.T01:intron 40.0%
! TTTTGGCAAACGCTACACTT+TGG + Chr6:108694596-108694615 MsG0680035579.01.T01:intron 40.0%
! TTTTGGTAAACGATGCAGAC+CGG + Chr6:108695400-108695419 MsG0680035579.01.T01:intron 40.0%
! TTTTGTAACGGCTGATATCG+CGG - Chr6:108702003-108702022 None:intergenic 40.0%
!! ACTTAGCTTTTGCACTGGAA+CGG + Chr6:108698557-108698576 MsG0680035579.01.T01:intron 40.0%
!! AGAGATGATGGAAGATGAAG+TGG + Chr6:108698671-108698690 MsG0680035579.01.T01:intron 40.0%
!! AGAGATTCCAATTGGTAGTG+TGG + Chr6:108695666-108695685 MsG0680035579.01.T01:intron 40.0%
!! ATGCTTGCTTTTCATTTCCG+AGG - Chr6:108698883-108698902 None:intergenic 40.0%
!! ATGGTTCTGTTGCCTTTTAC+AGG + Chr6:108700927-108700946 MsG0680035579.01.T01:intron 40.0%
!! CTCCCTTCTTTTTGTTTGGT+TGG + Chr6:108700353-108700372 MsG0680035579.01.T01:intron 40.0%
!!! GAGCCCAAGGTTTTAAATAC+AGG + Chr6:108701970-108701989 MsG0680035579.01.T01:intron 40.0%
!!! TGAGGTGCTGTTTGCTTTTT+GGG + Chr6:108699815-108699834 MsG0680035579.01.T01:intron 40.0%
!!! TGTTTTGGTTTCTTTCACCG+AGG + Chr6:108701455-108701474 MsG0680035579.01.T01:intron 40.0%
!!! TTGAGGTGCTGTTTGCTTTT+TGG + Chr6:108699814-108699833 MsG0680035579.01.T01:intron 40.0%
AAATGGCAAAGGCAAGGGAT+AGG + Chr6:108695807-108695826 MsG0680035579.01.T01:exon 45.0%
AACTCTCACAAGCCATTCAG+CGG + Chr6:108700989-108701008 MsG0680035579.01.T01:CDS 45.0%
AATGAGAGAGAGAGAGAGAG+AGG - Chr6:108694034-108694053 None:intergenic 45.0%
ACAATGTTTCGCGGCCATAA+CGG - Chr6:108702168-108702187 None:intergenic 45.0%
ACATGAAATGCTCTCAGCCT+TGG - Chr6:108695007-108695026 None:intergenic 45.0%
ACTGAGAGGAGAATAAGGCT+AGG + Chr6:108701754-108701773 MsG0680035579.01.T01:intron 45.0%
ACTTGGAGTTTGAGTGAGTG+AGG + Chr6:108697965-108697984 MsG0680035579.01.T01:intron 45.0%
AGATGAATCTCTCCCAGCTT+TGG - Chr6:108701947-108701966 None:intergenic 45.0%
AGATTCATCTCTTGAGCCCA+AGG + Chr6:108701957-108701976 MsG0680035579.01.T01:intron 45.0%
AGTCAGTTTCCATCCAAAGC+TGG + Chr6:108701931-108701950 MsG0680035579.01.T01:intron 45.0%
ATAGTGCAGGTGAAGTTGAC+TGG + Chr6:108699299-108699318 MsG0680035579.01.T01:intron 45.0%
ATCCCATTAGGAAAGCGGTA+TGG + Chr6:108699023-108699042 MsG0680035579.01.T01:intron 45.0%
ATGACGACACTGTCTCTTGA+TGG + Chr6:108695461-108695480 MsG0680035579.01.T01:intron 45.0%
ATTGAGAATCGCAGCAGAGA+AGG - Chr6:108694058-108694077 None:intergenic 45.0%
CAAAATCTGGTAGCAGAGAG+AGG + Chr6:108698289-108698308 MsG0680035579.01.T01:intron 45.0%
CAATTCAAACACCCCGAGTT+TGG + Chr6:108698255-108698274 MsG0680035579.01.T01:intron 45.0%
CACCATGTTACCTTCCCTAA+AGG + Chr6:108701806-108701825 MsG0680035579.01.T01:intron 45.0%
CAGCCGTTACAAAACGGTAT+AGG + Chr6:108702009-108702028 MsG0680035579.01.T01:intron 45.0%
CATCTAGCAAGCATCTGTCA+AGG + Chr6:108701867-108701886 MsG0680035579.01.T01:intron 45.0%
CATTCCCTTGCAGGCTAAAT+TGG + Chr6:108696154-108696173 MsG0680035579.01.T01:intron 45.0%
CCGTGACTACATCAAGTTCT+TGG + Chr6:108699189-108699208 MsG0680035579.01.T01:intron 45.0%
CCTCTGCTGAGTTTGAAGAT+GGG - Chr6:108698232-108698251 None:intergenic 45.0%
CGATGGGATTGTCAGAATCA+CGG + Chr6:108694560-108694579 MsG0680035579.01.T01:intron 45.0%
CTCCACATCACCTGAATTAG+AGG - Chr6:108700005-108700024 None:intergenic 45.0%
CTCCATACCGCTTTCCTAAT+GGG - Chr6:108699028-108699047 None:intergenic 45.0%
CTGAGATCCCATTAGGAAAG+CGG + Chr6:108699018-108699037 MsG0680035579.01.T01:intron 45.0%
GAAAGTTAGAGAGATGAGGG+AGG + Chr6:108700515-108700534 MsG0680035579.01.T01:intron 45.0%
GACTGAGGACTTCAAAGATG+CGG + Chr6:108695829-108695848 MsG0680035579.01.T01:CDS 45.0%
GAGACCATTGAAACTGCACT+TGG + Chr6:108698434-108698453 MsG0680035579.01.T01:intron 45.0%
GAGAGGATTTACGTCACCAA+TGG + Chr6:108699379-108699398 MsG0680035579.01.T01:intron 45.0%
GAGGATTTACGTCACCAATG+GGG + Chr6:108699381-108699400 MsG0680035579.01.T01:intron 45.0%
GATGCCAATTTAGCCTGCAA+GGG - Chr6:108696161-108696180 None:intergenic 45.0%
GCAAAACATGTGTAGCCATC+AGG - Chr6:108700278-108700297 None:intergenic 45.0%
GCACTACTGCTGAGATTCTT+TGG - Chr6:108698521-108698540 None:intergenic 45.0%
GCAGATGCTCTTGCCAAAAA+TGG - Chr6:108701786-108701805 None:intergenic 45.0%
GCATATCAGCTGAAGTCACA+TGG - Chr6:108696803-108696822 None:intergenic 45.0%
GCTTGGCATTACAACTGCAA+AGG + Chr6:108697680-108697699 MsG0680035579.01.T01:CDS 45.0%
GGAGGCAATGAAGATTGAAG+AGG - Chr6:108702255-108702274 None:intergenic 45.0%
GTCAGTTTCCATCCAAAGCT+GGG + Chr6:108701932-108701951 MsG0680035579.01.T01:intron 45.0%
GTCTAGTTGTGAGGGTAAGT+TGG - Chr6:108697809-108697828 None:intergenic 45.0%
GTGATCCTTTCTCCAAACTC+GGG - Chr6:108698270-108698289 None:intergenic 45.0%
GTGCTTCGTGTAGAGCTTAA+TGG + Chr6:108696578-108696597 MsG0680035579.01.T01:intron 45.0%
GTTGCAGATGTCTTGCTAGA+TGG - Chr6:108698789-108698808 None:intergenic 45.0%
TAGCCCACATCCAACAAACT+AGG + Chr6:108694686-108694705 MsG0680035579.01.T01:intron 45.0%
TATGTGGGGTCTAGTTGTGA+GGG - Chr6:108697817-108697836 None:intergenic 45.0%
TCAAGAGACAGTGTCGTCAT+TGG - Chr6:108695461-108695480 None:intergenic 45.0%
TCTTAGCCAGCCTAGCAAAT+TGG + Chr6:108697036-108697055 MsG0680035579.01.T01:intron 45.0%
TGATCCTTTCTCCAAACTCG+GGG - Chr6:108698269-108698288 None:intergenic 45.0%
TTATGTGGGGTCTAGTTGTG+AGG - Chr6:108697818-108697837 None:intergenic 45.0%
TTGAGAATCGCAGCAGAGAA+GGG - Chr6:108694057-108694076 None:intergenic 45.0%
TTGTCAGCACTATTGCGTAG+CGG - Chr6:108694318-108694337 None:intergenic 45.0%
TTTCACCGAGGTAATGTTGG+TGG + Chr6:108701467-108701486 MsG0680035579.01.T01:intron 45.0%
! AACTCGGGGTGTTTGAATTG+CGG - Chr6:108698255-108698274 None:intergenic 45.0%
! ACAGCAAATAACGGTATCGG+TGG - Chr6:108702038-108702057 None:intergenic 45.0%
! ACGGCGAGTCACTTCAATTT+TGG + Chr6:108694579-108694598 MsG0680035579.01.T01:intron 45.0%
! ATCACTCACACCTTTAGGGA+AGG - Chr6:108701819-108701838 None:intergenic 45.0%
! CACCTTTAGGGAAGGTAACA+TGG - Chr6:108701811-108701830 None:intergenic 45.0%
! CTTGACAGATGCTTGCTAGA+TGG - Chr6:108701869-108701888 None:intergenic 45.0%
! CTTTAGGGAAGGTAACATGG+TGG - Chr6:108701808-108701827 None:intergenic 45.0%
! GAAAACTCAAAAGGCTGGCT+TGG + Chr6:108697663-108697682 MsG0680035579.01.T01:CDS 45.0%
! GTGTGTTTTCATTCCCTTGC+AGG + Chr6:108696145-108696164 MsG0680035579.01.T01:intron 45.0%
! TTGGATGGAAACTGACTCTG+TGG - Chr6:108701928-108701947 None:intergenic 45.0%
!! CACAAACCAATTTGCTAGGC+TGG - Chr6:108697045-108697064 None:intergenic 45.0%
!! CTACTCTAGAGCCTCTACTT+GGG - Chr6:108699467-108699486 None:intergenic 45.0%
!! CTTAGCTTTTGCACTGGAAC+GGG + Chr6:108698558-108698577 MsG0680035579.01.T01:intron 45.0%
!! GCTCGAGAGTATTGGAGAAT+TGG + Chr6:108696689-108696708 MsG0680035579.01.T01:intron 45.0%
!! GCTGAACGGAGTTTGTTGAT+AGG + Chr6:108698977-108698996 MsG0680035579.01.T01:intron 45.0%
!! TAGCCTTATTCTCCTCTCAG+TGG - Chr6:108701755-108701774 None:intergenic 45.0%
!! TCTACTCTAGAGCCTCTACT+TGG - Chr6:108699468-108699487 None:intergenic 45.0%
!! TTGGTGACGTAAATCCTCTC+TGG - Chr6:108699379-108699398 None:intergenic 45.0%
AAAGGCAAGGGATAGGACTG+AGG + Chr6:108695814-108695833 MsG0680035579.01.T01:CDS 50.0%
AACACCCCGAGTTTGGAGAA+AGG + Chr6:108698262-108698281 MsG0680035579.01.T01:intron 50.0%
AACTAGATGGGAGTTGCTGC+AGG + Chr6:108698467-108698486 MsG0680035579.01.T01:intron 50.0%
AAGGAGGCAGAATGGGAGAT+GGG - Chr6:108693919-108693938 None:intergenic 50.0%
ACAGCCGCAAAACACCGTTA+CGG + Chr6:108702109-108702128 MsG0680035579.01.T01:intron 50.0%
AGACAAAAAAGTGGGAGGGG+AGG + Chr6:108701725-108701744 MsG0680035579.01.T01:intron 50.0%
ATGCTTGTGGGCAATGGTGT+CGG - Chr6:108697712-108697731 None:intergenic 50.0%
ATTCAGGTGATGTGGAGCTC+AGG + Chr6:108700008-108700027 MsG0680035579.01.T01:CDS 50.0%
CCACCACTGAGAGGAGAATA+AGG + Chr6:108701749-108701768 MsG0680035579.01.T01:intron 50.0%
CCATTAGGAAAGCGGTATGG+AGG + Chr6:108699026-108699045 MsG0680035579.01.T01:intron 50.0%
CCCATCTTCAAACTCAGCAG+AGG + Chr6:108698229-108698248 MsG0680035579.01.T01:intron 50.0%
CCTCCATACCGCTTTCCTAA+TGG - Chr6:108699029-108699048 None:intergenic 50.0%
CCTTATTCTCCTCTCAGTGG+TGG - Chr6:108701752-108701771 None:intergenic 50.0%
CTAGTTTCAGGCCCAAGTAG+AGG + Chr6:108699453-108699472 MsG0680035579.01.T01:intron 50.0%
GCCTCTGCTGAGTTTGAAGA+TGG - Chr6:108698233-108698252 None:intergenic 50.0%
GCTCTTGCCAAAAATGGGCA+GGG - Chr6:108701780-108701799 None:intergenic 50.0%
GGATGCCAATTTAGCCTGCA+AGG - Chr6:108696162-108696181 None:intergenic 50.0%
GGATGCCACCAACATTACCT+CGG - Chr6:108701475-108701494 None:intergenic 50.0%
GGATTGGAAGGAGGCAGAAT+GGG - Chr6:108693926-108693945 None:intergenic 50.0%
TAAGAAAAACCCGGAGCTGC+CGG + Chr6:108701635-108701654 MsG0680035579.01.T01:intron 50.0%
TAGGAAAGCGGTATGGAGGA+GGG + Chr6:108699030-108699049 MsG0680035579.01.T01:intron 50.0%
TCACCAATGGGGCAAGAAAC+AGG + Chr6:108699392-108699411 MsG0680035579.01.T01:intron 50.0%
TGATGAAACACGTGCCCTTC+AGG + Chr6:108700084-108700103 MsG0680035579.01.T01:CDS 50.0%
TGCTCTTGCCAAAAATGGGC+AGG - Chr6:108701781-108701800 None:intergenic 50.0%
TGCTGCAGGAACCTGTAGTT+CGG + Chr6:108698481-108698500 MsG0680035579.01.T01:intron 50.0%
TGGCCGCATCTGTGCATTTA+AGG - Chr6:108698769-108698788 None:intergenic 50.0%
TTAGGAAAGCGGTATGGAGG+AGG + Chr6:108699029-108699048 MsG0680035579.01.T01:intron 50.0%
TTCAGGTGATGTGGAGCTCA+GGG + Chr6:108700009-108700028 MsG0680035579.01.T01:CDS 50.0%
TTGGTGAATGGGGACCTTTG+TGG - Chr6:108696215-108696234 None:intergenic 50.0%
! AGCCGTCAATTTTCCTGTCG+TGG - Chr6:108699267-108699286 None:intergenic 50.0%
! CAACCTGTTTCTTGCCCCAT+TGG - Chr6:108699398-108699417 None:intergenic 50.0%
! GTGGGCTACTGATGTATGTG+TGG - Chr6:108694674-108694693 None:intergenic 50.0%
! GTGTGGATTAACGGTGGGTT+TGG - Chr6:108694657-108694676 None:intergenic 50.0%
! TGGATTGGAAGGAGGCAGAA+TGG - Chr6:108693927-108693946 None:intergenic 50.0%
!! GAATCTCTCCCAGCTTTGGA+TGG - Chr6:108701943-108701962 None:intergenic 50.0%
!! GAGGAGTGTTTGAGAGAACG+TGG + Chr6:108697984-108698003 MsG0680035579.01.T01:intron 50.0%
!! TCGCTCTTTGGGGTATGATG+AGG + Chr6:108695865-108695884 MsG0680035579.01.T01:CDS 50.0%
!! TTCCAATTGGTAGTGTGGCC+TGG + Chr6:108695671-108695690 MsG0680035579.01.T01:intron 50.0%
ACCCCAAAGAGCGAGCACTT+TGG - Chr6:108695859-108695878 None:intergenic 55.0%
AGTCAGCCAGCAGATGCCTT+AGG - Chr6:108698076-108698095 None:intergenic 55.0%
ATGTTTCGCGGCCATAACGG+AGG - Chr6:108702165-108702184 None:intergenic 55.0%
ATTGCTCATCCCCTTCCCTG+CGG + Chr6:108697859-108697878 MsG0680035579.01.T01:intron 55.0%
CCATACCACGCCATGCTTGT+GGG - Chr6:108697724-108697743 None:intergenic 55.0%
GAAGGAGGCAGAATGGGAGA+TGG - Chr6:108693920-108693939 None:intergenic 55.0%
GACACCATTGCCCACAAGCA+TGG + Chr6:108697711-108697730 MsG0680035579.01.T01:CDS 55.0%
GACCAGGCCACACTACCAAT+TGG - Chr6:108695676-108695695 None:intergenic 55.0%
GCCTGTTGTTGTGCGAGACT+GGG - Chr6:108694009-108694028 None:intergenic 55.0%
GCTCAGAGCTATACGCTTCC+AGG + Chr6:108699913-108699932 MsG0680035579.01.T01:CDS 55.0%
GCTGCTGCTATTCCGCTGAA+TGG - Chr6:108701004-108701023 None:intergenic 55.0%
GGAGGGTTTCACAGCCGTAA+CGG - Chr6:108702147-108702166 None:intergenic 55.0%
GGCTGTGAAACCCTCCGTTA+TGG + Chr6:108702151-108702170 MsG0680035579.01.T01:intron 55.0%
GTGAATGGGGACCTTTGTGG+AGG - Chr6:108696212-108696231 None:intergenic 55.0%
TCCATACCACGCCATGCTTG+TGG - Chr6:108697725-108697744 None:intergenic 55.0%
TCCCAGTCTCGCACAACAAC+AGG + Chr6:108694005-108694024 MsG0680035579.01.T01:five_prime_UTR 55.0%
TCTGCCTCCTTCCAATCCAC+CGG + Chr6:108693928-108693947 MsG0680035579.01.T01:five_prime_UTR 55.0%
TGCCTGTTGTTGTGCGAGAC+TGG - Chr6:108694010-108694029 None:intergenic 55.0%
! AAGAGGCCTAAGGCATCTGC+TGG + Chr6:108698067-108698086 MsG0680035579.01.T01:intron 55.0%
! AGCTTTTGCACTGGAACGGG+CGG + Chr6:108698561-108698580 MsG0680035579.01.T01:intron 55.0%
! CGCCAAAGTGCTCGCTCTTT+GGG + Chr6:108695854-108695873 MsG0680035579.01.T01:CDS 55.0%
! GCAGCCGTAACGGTGTTTTG+CGG - Chr6:108702116-108702135 None:intergenic 55.0%
! GCCAAAGTGCTCGCTCTTTG+GGG + Chr6:108695855-108695874 MsG0680035579.01.T01:CDS 55.0%
! GGAAACTGACTCTGTGGCAG+TGG - Chr6:108701922-108701941 None:intergenic 55.0%
! TGTTTCGCGGCCATAACGGA+GGG - Chr6:108702164-108702183 None:intergenic 55.0%
CACGCCATGCTTGTGGGCAA+TGG - Chr6:108697718-108697737 None:intergenic 60.0%
CATTGCCCACAAGCATGGCG+TGG + Chr6:108697716-108697735 MsG0680035579.01.T01:CDS 60.0%
CCCACAAGCATGGCGTGGTA+TGG + Chr6:108697721-108697740 MsG0680035579.01.T01:intron 60.0%
CTGTGATGTCCCGCAGGGAA+GGG - Chr6:108697872-108697891 None:intergenic 60.0%
GGCTCACTGCGCAACTCATC+AGG - Chr6:108700037-108700056 None:intergenic 60.0%
GGGTTTCACAGCCGTAACGG+CGG - Chr6:108702144-108702163 None:intergenic 60.0%
GGTTTCACAGCCGTAACGGC+GGG - Chr6:108702143-108702162 None:intergenic 60.0%
GTGCGAGACTGGGACAGAGA+CGG - Chr6:108693999-108694018 None:intergenic 60.0%
TGGGACAGAGACGGTGCAGA+GGG - Chr6:108693990-108694009 None:intergenic 60.0%
TGTGATGTCCCGCAGGGAAG+GGG - Chr6:108697871-108697890 None:intergenic 60.0%
TTGCTCATCCCCTTCCCTGC+GGG + Chr6:108697860-108697879 MsG0680035579.01.T01:intron 60.0%
! GCGCCAAAGTGCTCGCTCTT+TGG + Chr6:108695853-108695872 MsG0680035579.01.T01:CDS 60.0%
! GGCTAGGCCCTGCCCATTTT+TGG + Chr6:108701770-108701789 MsG0680035579.01.T01:intron 60.0%
AGGGGAGGTCCACCACTGAG+AGG + Chr6:108701740-108701759 MsG0680035579.01.T01:intron 65.0%
CCTGTGATGTCCCGCAGGGA+AGG - Chr6:108697873-108697892 None:intergenic 65.0%
CCTTCCCTGCGGGACATCAC+AGG + Chr6:108697870-108697889 MsG0680035579.01.T01:intron 65.0%
CTGGGACAGAGACGGTGCAG+AGG - Chr6:108693991-108694010 None:intergenic 65.0%
GACAGAGACGGTGCAGAGGG+CGG - Chr6:108693987-108694006 None:intergenic 65.0%
GCCTCCTTCCAATCCACCGG+CGG + Chr6:108693931-108693950 MsG0680035579.01.T01:five_prime_UTR 65.0%
GGCTGCGAAACCCGCCGTTA+CGG + Chr6:108702130-108702149 MsG0680035579.01.T01:intron 65.0%
GTACGTGGTTCCGGCAGCTC+CGG - Chr6:108701648-108701667 None:intergenic 65.0%
GTGGCCTGTGATGTCCCGCA+GGG - Chr6:108697877-108697896 None:intergenic 65.0%
TACGTGGTTCCGGCAGCTCC+GGG - Chr6:108701647-108701666 None:intergenic 65.0%
TGTGGCCTGTGATGTCCCGC+AGG - Chr6:108697878-108697897 None:intergenic 65.0%
! GGCGGGTTTCGCAGCCGTAA+CGG - Chr6:108702126-108702145 None:intergenic 65.0%
!! AGGGCGGACTTGGTGGTGGT+GGG - Chr6:108693971-108693990 None:intergenic 65.0%
AGAGGCTGCCGCCGGTGGAT+TGG - Chr6:108693942-108693961 None:intergenic 70.0%
! GACGGTGCAGAGGGCGGACT+TGG - Chr6:108693981-108694000 None:intergenic 70.0%
! GGTGCAGAGGGCGGACTTGG+TGG - Chr6:108693978-108693997 None:intergenic 70.0%
!! GAGGGCGGACTTGGTGGTGG+TGG - Chr6:108693972-108693991 None:intergenic 70.0%
!! GCAGAGGGCGGACTTGGTGG+TGG - Chr6:108693975-108693994 None:intergenic 70.0%
!! GCCGCCGGTGGATTGGAAGG+AGG - Chr6:108693935-108693954 None:intergenic 70.0%
!! GCGGACTTGGTGGTGGTGGG+CGG - Chr6:108693968-108693987 None:intergenic 70.0%
!! GCTGCCGCCGGTGGATTGGA+AGG - Chr6:108693938-108693957 None:intergenic 70.0%
!! GGTGGTGGTGGGCGGCTGAG+AGG - Chr6:108693960-108693979 None:intergenic 75.0%
! GGCGGCTGAGAGGCTGCCGC+CGG - Chr6:108693950-108693969 None:intergenic 80.0%
! GGCTGAGAGGCTGCCGCCGG+TGG - Chr6:108693947-108693966 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 108693877 108702320 108693877 ID=MsG0680035579.01;Name=MsG0680035579.01
Chr6 mRNA 108693877 108702320 108693877 ID=MsG0680035579.01.T01;Parent=MsG0680035579.01;Name=MsG0680035579.01.T01;_AED=0.48;_eAED=0.48;_QI=167|0.71|0.75|0.87|0.85|0.75|8|0|302
Chr6 exon 108693877 108694026 108693877 ID=MsG0680035579.01.T01:exon:8235;Parent=MsG0680035579.01.T01
Chr6 exon 108695792 108695886 108695792 ID=MsG0680035579.01.T01:exon:8236;Parent=MsG0680035579.01.T01
Chr6 exon 108696167 108696250 108696167 ID=MsG0680035579.01.T01:exon:8237;Parent=MsG0680035579.01.T01
Chr6 exon 108697594 108697737 108697594 ID=MsG0680035579.01.T01:exon:8238;Parent=MsG0680035579.01.T01
Chr6 exon 108699863 108700105 108699863 ID=MsG0680035579.01.T01:exon:8239;Parent=MsG0680035579.01.T01
Chr6 exon 108700201 108700332 108700201 ID=MsG0680035579.01.T01:exon:8240;Parent=MsG0680035579.01.T01
Chr6 exon 108700949 108701082 108700949 ID=MsG0680035579.01.T01:exon:8241;Parent=MsG0680035579.01.T01
Chr6 exon 108702227 108702320 108702227 ID=MsG0680035579.01.T01:exon:8242;Parent=MsG0680035579.01.T01
Chr6 five_prime_UTR 108693877 108694026 108693877 ID=MsG0680035579.01.T01:five_prime_utr;Parent=MsG0680035579.01.T01
Chr6 five_prime_UTR 108695792 108695808 108695792 ID=MsG0680035579.01.T01:five_prime_utr;Parent=MsG0680035579.01.T01
Chr6 CDS 108695809 108695886 108695809 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108696167 108696250 108696167 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108697594 108697737 108697594 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108699863 108700105 108699863 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108700201 108700332 108700201 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108700949 108701082 108700949 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Chr6 CDS 108702227 108702320 108702227 ID=MsG0680035579.01.T01:cds;Parent=MsG0680035579.01.T01
Gene Sequence

>MsG0680035579.01.T01

ATGGCAAAGGCAAGGGATAGGACTGAGGACTTCAAAGATGCGGTGCGCCAAAGTGCTCGCTCTTTGGGGTATGATGAGGCTAAATTGGCATCCATTTTGGCATCTTTCATTATACATAAACCTCCACAAAGGTCCCCATTCACCAAAGCTGCATTTAAGACGGTTAGTGCTTTTATTAAAACTTGCCAAGAACAAATTGACGTTCTTAAGAATAGTATAAACAATGAAGAGGAAAACTCAAAAGGCTGGCTTGGCATTACAACTGCAAAGGCTAACGCCGACACCATTGCCCACAAGCATGGCGTGGTTCTAATTTTAAGTGAGAGACTCCATTCAGTTACGGCACAATTTGATCAGCTCAGAGCTATACGCTTCCAGGATGCTATTAATAGGGCAATACCACGAAGAAAACTTAATCGTATAACCAAGAAAGATTCTACCGAAACCTCTAATTCAGGTGATGTGGAGCTCAGGGAGCCTGATGAGTTGCGCAGTGAGCCTCTAAGAGTCCAACAACAATTATTGGATGATGAAACACGTGCCCTTCAGGTTGAATTGTCTAGTCTTCTGGACACAGTTCAAGAAACTGAGACTAAGATGGTGGAAATGTCTGCATTAAATCACCTGATGGCTACACATGTTTTGCAACAAGCTCAACAAATTGAGCATTTGTATGACCAGGCTGTTGAAGCTACTAAAAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGCGGAATAGCAGCAGCAGAACATTTCTTTTACTATTTCTGTTTGTGCTCACTTTTTCCATCATCTTTCTTGATTGCTTCGTTGTTCAATCTACATTGATTCCTCTTCAATCTTCATTGCCTCCTCTAAGTAATTTCACTCTCACTCTTAATTTGGGTGTTGTTTTGTAG
Protein sequence

>MsG0680035579.01.T01

MAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPQRSPFTKAAFKTVSAFIKTCQEQIDVLKNSINNEEENSKGWLGITTAKANADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPRRKLNRITKKDSTETSNSGDVELREPDELRSEPLRVQQQLLDDETRALQVELSSLLDTVQETETKMVEMSALNHLMATHVLQQAQQIEHLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDCFVVQSTLIPLQSSLPPLSNFTLTLNLGVVL*