AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028232.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028232.01.T01 MTR_5g065930 95.964 223 9 0 1 223 1 223 8.55e-157 433
MsG0580028232.01.T01 MTR_5g065930 95.431 197 9 0 1 197 1 197 6.55e-136 379
MsG0580028232.01.T01 MTR_1g030420 30.000 110 77 0 113 222 165 274 1.71e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028232.01.T01 AT5G49710 64.126 223 74 3 7 223 13 235 1.93e-95 278
MsG0580028232.01.T01 AT5G49710 63.677 223 74 4 7 223 13 234 7.14e-93 272
MsG0580028232.01.T01 AT4G24590 59.009 222 86 2 7 223 20 241 1.26e-84 251
MsG0580028232.01.T01 AT4G24590 57.709 227 86 3 7 223 20 246 1.20e-82 246
MsG0580028232.01.T01 AT5G49710 56.790 162 64 3 7 162 13 174 2.89e-52 167
MsG0580028232.01.T01 AT4G24590 50.000 164 77 2 7 165 20 183 2.74e-43 144
MsG0580028232.01.T01 AT4G24590 50.000 150 70 2 7 151 20 169 6.62e-38 130
MsG0580028232.01.T01 AT4G24590 50.000 150 70 2 7 151 20 169 6.62e-38 130
MsG0580028232.01.T01 AT1G44770 28.125 128 89 1 99 223 143 270 4.22e-15 72.8
MsG0580028232.01.T01 AT1G44770 28.125 128 89 1 99 223 144 271 4.31e-15 72.8

Find 68 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATGAAATTCATTGAATT+TGG 0.184215 5:-77068832 MsG0580028232.01.T01:three_prime_UTR
GGATGGAATTGCATGCTTTA+TGG 0.225852 5:-77073148 MsG0580028232.01.T01:CDS
GGATTAACCTGATCGGCTTC+TGG 0.251487 5:+77073932 None:intergenic
CTCTTGACCCGAACCGGGTT+TGG 0.268656 5:+77074100 None:intergenic
TACATACCTTGGTATTCTTA+AGG 0.312098 5:+77073109 None:intergenic
AGAAGGTAATTCTTGGGATT+TGG 0.316183 5:-77073250 MsG0580028232.01.T01:CDS
GTTGCAGCCCTTAGGATAAC+AGG 0.317438 5:+77068989 None:intergenic
TGGTCAGTGAAAATGATCTT+TGG 0.322257 5:-77073230 MsG0580028232.01.T01:CDS
TCACCATCCTGGAGTTGATT+TGG 0.325062 5:+77069858 None:intergenic
TCTGGATCGGGAGGTGTAGA+AGG 0.333294 5:+77073950 None:intergenic
GGGCTGCAACTAAAGCATTC+TGG 0.364903 5:-77068976 MsG0580028232.01.T01:CDS
TTGCAGAAGAAGGTAATTCT+TGG 0.368780 5:-77073257 MsG0580028232.01.T01:intron
TTATCCAATCAGATGGCAAC+AGG 0.374444 5:+77068807 None:intergenic
ACATACCTTGGTATTCTTAA+GGG 0.386453 5:+77073110 None:intergenic
ACCTGATCGGCTTCTGGATC+GGG 0.391887 5:+77073938 None:intergenic
GGTCAGTGAAAATGATCTTT+GGG 0.392740 5:-77073229 MsG0580028232.01.T01:CDS
TTGCCGATCCAAACCCGGTT+CGG 0.393946 5:-77074108 MsG0580028232.01.T01:CDS
AAACAATGTGAGGCGAGTTC+CGG 0.399772 5:-77068900 MsG0580028232.01.T01:three_prime_UTR
TGCCGATCCAAACCCGGTTC+GGG 0.402721 5:-77074107 MsG0580028232.01.T01:CDS
TCTAACTTGTCAAGAAAATC+AGG 0.405527 5:+77073403 None:intergenic
TCATGGGGTGCTACAGCCAT+TGG 0.436481 5:-77069591 MsG0580028232.01.T01:CDS
TTTACATGGGAGGGGTAAAC+CGG 0.437780 5:+77068881 None:intergenic
TATATATAATGTTGCATCAT+GGG 0.450568 5:-77069607 MsG0580028232.01.T01:CDS
GGACCCTGTTGCCATCTGAT+TGG 0.453613 5:-77068811 MsG0580028232.01.T01:three_prime_UTR
TGCAGAAGAAGGTAATTCTT+GGG 0.456011 5:-77073256 MsG0580028232.01.T01:intron
TCCCGATCCAGAAGCCGATC+AGG 0.460640 5:-77073939 MsG0580028232.01.T01:intron
TGAATTTCATATTACACGGT+TGG 0.462589 5:+77068842 None:intergenic
AGGGGAAGCTTCGAAAGGCC+TGG 0.464151 5:-77069644 MsG0580028232.01.T01:CDS
AAGCGTTGTTGATGAGTTCA+AGG 0.469386 5:+77074038 None:intergenic
ATCAAAACCCTGTTATCCTA+AGG 0.475876 5:-77068997 MsG0580028232.01.T01:CDS
AGCTTCGAAAGGCCTGGGAT+GGG 0.476263 5:-77069638 MsG0580028232.01.T01:CDS
ACTGTTCCAATACGGTTTGA+AGG 0.479954 5:+77074071 None:intergenic
AAGCTTCGAAAGGCCTGGGA+TGG 0.490928 5:-77069639 MsG0580028232.01.T01:CDS
GTGTAGAAGGGAGAGATTGT+TGG 0.492306 5:+77073963 None:intergenic
ATCATCATCATCGTCGTCAT+CGG 0.504923 5:+77074012 None:intergenic
CATGGGGTGCTACAGCCATT+GGG 0.506031 5:-77069590 MsG0580028232.01.T01:intron
ATGCTTTAGTTGCAGCCCTT+AGG 0.507499 5:+77068981 None:intergenic
TGTTAGACAAGATGATATAG+TGG 0.508853 5:-77073169 MsG0580028232.01.T01:CDS
CTGTTCCAATACGGTTTGAA+GGG 0.515281 5:+77074072 None:intergenic
AGCAACCAGACTCACCATCC+TGG 0.515441 5:+77069847 None:intergenic
AACCTGATCGGCTTCTGGAT+CGG 0.518267 5:+77073937 None:intergenic
TATAACTTTGCTCCCATCCC+AGG 0.519243 5:+77069626 None:intergenic
GACCCGAACCGGGTTTGGAT+CGG 0.521496 5:+77074105 None:intergenic
GGGGAAGCTTCGAAAGGCCT+GGG 0.522509 5:-77069643 MsG0580028232.01.T01:CDS
TCTTTGACACTGTTCCAATA+CGG 0.526313 5:+77074063 None:intergenic
TCGGTTTATCAGAACACAAC+CGG 0.529456 5:-77073367 MsG0580028232.01.T01:intron
TTATATATAATGTTGCATCA+TGG 0.534694 5:-77069608 MsG0580028232.01.T01:CDS
TCAAAACCCTGTTATCCTAA+GGG 0.542723 5:-77068996 MsG0580028232.01.T01:CDS
TCTGATTTGTCAATGCAGCT+TGG 0.562168 5:-77068925 MsG0580028232.01.T01:exon
AGAAGGGAGAGATTGTTGGT+TGG 0.565291 5:+77073967 None:intergenic
TTGGGAAGATGTTGACACTT+CGG 0.573392 5:-77073211 MsG0580028232.01.T01:CDS
AGACAAGATGATATAGTGGA+TGG 0.579473 5:-77073165 MsG0580028232.01.T01:CDS
TGAAATTGGATTAACCTGAT+CGG 0.580725 5:+77073925 None:intergenic
TTTGACTCCAAATCAACTCC+AGG 0.587991 5:-77069865 MsG0580028232.01.T01:CDS
TGACAAGTTAGAGTGTGCAC+AGG 0.599804 5:-77073392 MsG0580028232.01.T01:CDS
GTTAGAGTGTGCACAGGCGT+CGG 0.606007 5:-77073386 MsG0580028232.01.T01:CDS
TATAATTGCCGATCCAAACC+CGG 0.609116 5:-77074113 MsG0580028232.01.T01:CDS
CTGGATCGGGAGGTGTAGAA+GGG 0.610181 5:+77073951 None:intergenic
TGTATAATCATTTATACACA+TGG 0.614270 5:+77068739 None:intergenic
TCAATGAATTTCATATTACA+CGG 0.615224 5:+77068838 None:intergenic
TGATCGGCTTCTGGATCGGG+AGG 0.618272 5:+77073941 None:intergenic
AGCGTTGTTGATGAGTTCAA+GGG 0.618346 5:+77074039 None:intergenic
ATATATAATGTTGCATCATG+GGG 0.620394 5:-77069606 MsG0580028232.01.T01:CDS
TTGCAGCCCTTAGGATAACA+GGG 0.635455 5:+77068990 None:intergenic
GTTGTCCCTTAAGAATACCA+AGG 0.653063 5:-77073115 MsG0580028232.01.T01:intron
TATCCAATCAGATGGCAACA+GGG 0.660516 5:+77068808 None:intergenic
ACTCCAAATCAACTCCAGGA+TGG 0.670728 5:-77069861 MsG0580028232.01.T01:intron
CAGCTTGGAGAAACAATGTG+AGG 0.704131 5:-77068910 MsG0580028232.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAAGTAATAAATAA+AGG + Chr5:77073815-77073834 None:intergenic 10.0%
!! AAATGAAAGTAATAAATAAA+GGG + Chr5:77073814-77073833 None:intergenic 10.0%
!! AAATTAAATTCAACTTAATT+AGG - Chr5:77068969-77068988 MsG0580028232.01.T01:CDS 10.0%
!! AATTAAATTCAACTTAATTA+GGG - Chr5:77068970-77068989 MsG0580028232.01.T01:CDS 10.0%
!! TAAAAATAAGTAAATATTCT+TGG + Chr5:77071829-77071848 None:intergenic 10.0%
!!! TTTTTAATAATATTCAACAA+AGG + Chr5:77070084-77070103 None:intergenic 10.0%
!! AAAAATTTATCTGGATAAAA+AGG + Chr5:77073061-77073080 None:intergenic 15.0%
!! AAACTACTAAAATCTTTAAT+TGG - Chr5:77070101-77070120 MsG0580028232.01.T01:intron 15.0%
!! AATATGAAATTCATTGAATT+TGG - Chr5:77074018-77074037 MsG0580028232.01.T01:CDS 15.0%
!! AATGAAAGTAATAAATAAAG+GGG + Chr5:77073813-77073832 None:intergenic 15.0%
!! AGAGAATTAAAAAATGAAAT+TGG + Chr5:77068942-77068961 None:intergenic 15.0%
!! ATTATAAAAGGAGTTATAAA+AGG + Chr5:77073316-77073335 None:intergenic 15.0%
!! CAAAATATACTTAACATATT+TGG + Chr5:77071501-77071520 None:intergenic 15.0%
!! TAAAAAAAATGTTGAAGAAT+GGG + Chr5:77072700-77072719 None:intergenic 15.0%
!! TAATTTATTCACAAAATTTC+TGG - Chr5:77069000-77069019 MsG0580028232.01.T01:CDS 15.0%
!!! CAAATATGTTAAGTATATTT+TGG - Chr5:77071499-77071518 MsG0580028232.01.T01:intron 15.0%
!!! CTAAACATTTTTTTTTACAT+GGG + Chr5:77073985-77074004 None:intergenic 15.0%
!!! TCTAAACATTTTTTTTTACA+TGG + Chr5:77073986-77074005 None:intergenic 15.0%
!! ATAACTATTATATTCATGTC+AGG + Chr5:77070333-77070352 None:intergenic 20.0%
!! ATATAGCAAACACATATTAT+GGG - Chr5:77073289-77073308 MsG0580028232.01.T01:intron 20.0%
!! ATGAATAAGTATAATTGTTG+AGG + Chr5:77073424-77073443 None:intergenic 20.0%
!! CAAGAATAAGATATCATATT+AGG + Chr5:77073034-77073053 None:intergenic 20.0%
!! CGTTTATTAATTTCATGTAT+TGG + Chr5:77071535-77071554 None:intergenic 20.0%
!! CTAAAAAAAATGTTGAAGAA+TGG + Chr5:77072701-77072720 None:intergenic 20.0%
!! CTAAAAAAGTAAAGCAAAAA+AGG + Chr5:77070193-77070212 None:intergenic 20.0%
!! CTAATATGATATCTTATTCT+TGG - Chr5:77073032-77073051 MsG0580028232.01.T01:intron 20.0%
!! GAATGTTAGGAAATTATAAA+AGG + Chr5:77073791-77073810 None:intergenic 20.0%
!! TAACATATAAGGAATTAGTT+GGG + Chr5:77072644-77072663 None:intergenic 20.0%
!! TATAAAAGGAAACATTATCT+TGG + Chr5:77073777-77073796 None:intergenic 20.0%
!! TATATAGCAAACACATATTA+TGG - Chr5:77073288-77073307 MsG0580028232.01.T01:intron 20.0%
!! TATATATAATGTTGCATCAT+GGG - Chr5:77073243-77073262 MsG0580028232.01.T01:CDS 20.0%
!! TATGTCCATTAGATTAAATA+GGG - Chr5:77070619-77070638 MsG0580028232.01.T01:intron 20.0%
!! TCAATAACTTAATGGTAATA+GGG + Chr5:77072220-77072239 None:intergenic 20.0%
!! TCAATGAATTTCATATTACA+CGG + Chr5:77074015-77074034 None:intergenic 20.0%
!! TGAACACATTAATATGAAAA+AGG + Chr5:77069096-77069115 None:intergenic 20.0%
!! TGACTTAGTACTATTAATTA+CGG - Chr5:77069137-77069156 MsG0580028232.01.T01:intron 20.0%
!! TGTATAATCATTTATACACA+TGG + Chr5:77074114-77074133 None:intergenic 20.0%
!! TTATATATAATGTTGCATCA+TGG - Chr5:77073242-77073261 MsG0580028232.01.T01:CDS 20.0%
!! TTATGTCCATTAGATTAAAT+AGG - Chr5:77070618-77070637 MsG0580028232.01.T01:intron 20.0%
!! TTATTCCTTTATAACAAACA+CGG + Chr5:77070446-77070465 None:intergenic 20.0%
!!! AATCAATGCTGTTTATTTAT+AGG - Chr5:77070258-77070277 MsG0580028232.01.T01:intron 20.0%
!!! AATTTTAGAAAAATATACCC+AGG - Chr5:77071851-77071870 MsG0580028232.01.T01:intron 20.0%
!!! ACAATGTTTATTTTATACCT+TGG + Chr5:77073713-77073732 None:intergenic 20.0%
!!! ATAACTCCTTTTATAATTTC+TGG - Chr5:77073319-77073338 MsG0580028232.01.T01:intron 20.0%
!!! ATCAATGCTGTTTATTTATA+GGG - Chr5:77070259-77070278 MsG0580028232.01.T01:intron 20.0%
!!! ATTTTCTGTGAAAAAGAAAA+AGG - Chr5:77073186-77073205 MsG0580028232.01.T01:CDS 20.0%
!!! CAATGTTTATTTTATACCTT+GGG + Chr5:77073712-77073731 None:intergenic 20.0%
!!! TGCTTAAAAAGCATATATAA+AGG + Chr5:77070010-77070029 None:intergenic 20.0%
!!! TGTTCCTTATTTAATCTAAT+GGG - Chr5:77071269-77071288 MsG0580028232.01.T01:intron 20.0%
!!! TTAAATGCTTTTTGTTTCTT+TGG - Chr5:77070049-77070068 MsG0580028232.01.T01:intron 20.0%
!!! TTTCATTTTTCATTCTTAAC+AGG - Chr5:77073826-77073845 MsG0580028232.01.T01:intron 20.0%
!!! TTTTCTGTGAAAAAGAAAAA+GGG - Chr5:77073187-77073206 MsG0580028232.01.T01:CDS 20.0%
! AAACAATACCATCTTCAAAA+TGG + Chr5:77072065-77072084 None:intergenic 25.0%
! AAAGTACAGTAATAGAATCT+AGG + Chr5:77073740-77073759 None:intergenic 25.0%
! AAGTACAGTAATAGAATCTA+GGG + Chr5:77073739-77073758 None:intergenic 25.0%
! AATAAATAAAGGGGAATGTT+AGG + Chr5:77073804-77073823 None:intergenic 25.0%
! AATAAGTATAATTGTTGAGG+CGG + Chr5:77073421-77073440 None:intergenic 25.0%
! AATATTCCTAGGAATAAGTT+TGG + Chr5:77070405-77070424 None:intergenic 25.0%
! ACAACAATGAGTAACATATA+AGG + Chr5:77072655-77072674 None:intergenic 25.0%
! ATATATAATGTTGCATCATG+GGG - Chr5:77073244-77073263 MsG0580028232.01.T01:CDS 25.0%
! ATCTGTTGCATATATATGTA+GGG - Chr5:77071756-77071775 MsG0580028232.01.T01:intron 25.0%
! CAGATACAAAAGAAAAAGTA+CGG + Chr5:77071741-77071760 None:intergenic 25.0%
! CTATTACCATTAAGTTATTG+AGG - Chr5:77072219-77072238 MsG0580028232.01.T01:intron 25.0%
! CTCAATAACTTAATGGTAAT+AGG + Chr5:77072221-77072240 None:intergenic 25.0%
! GACTTAGTACTATTAATTAC+GGG - Chr5:77069138-77069157 MsG0580028232.01.T01:intron 25.0%
! GTAACATATAAGGAATTAGT+TGG + Chr5:77072645-77072664 None:intergenic 25.0%
! GTATTCCCTATTTAATCTAA+TGG + Chr5:77070627-77070646 None:intergenic 25.0%
! TAATCTTTCAAAAAGCTGTT+TGG + Chr5:77071892-77071911 None:intergenic 25.0%
! TAGTATAACGAAAACTCTAA+CGG - Chr5:77069203-77069222 MsG0580028232.01.T01:intron 25.0%
! TATAATGCACTATTCATTGT+CGG - Chr5:77070352-77070371 MsG0580028232.01.T01:intron 25.0%
! TATCTGTTGCATATATATGT+AGG - Chr5:77071755-77071774 MsG0580028232.01.T01:intron 25.0%
! TATGCCCATTAGATTAAATA+AGG + Chr5:77071276-77071295 None:intergenic 25.0%
! TATTCCTAGGAATATTAGAT+GGG - Chr5:77070409-77070428 MsG0580028232.01.T01:intron 25.0%
! TATTCCTTTATAACAAACAC+GGG + Chr5:77070445-77070464 None:intergenic 25.0%
! TATTCTTGAATTGCAATTGA+TGG - Chr5:77070153-77070172 MsG0580028232.01.T01:intron 25.0%
! TGAAATTGAGCTTGTATTTA+AGG - Chr5:77069173-77069192 MsG0580028232.01.T01:intron 25.0%
! TGCTAGTTAGATAAAAGATT+GGG - Chr5:77073110-77073129 MsG0580028232.01.T01:intron 25.0%
! TTACTCATTGTTGTATGAAT+GGG - Chr5:77072661-77072680 MsG0580028232.01.T01:intron 25.0%
! TTATTCCTAGGAATATTAGA+TGG - Chr5:77070408-77070427 MsG0580028232.01.T01:intron 25.0%
! TTGCAGAAAATAAGGAAATA+AGG + Chr5:77070770-77070789 None:intergenic 25.0%
! TTGCTAGTTAGATAAAAGAT+TGG - Chr5:77073109-77073128 MsG0580028232.01.T01:intron 25.0%
! TTTCTGTGAAAAAGAAAAAG+GGG - Chr5:77073188-77073207 MsG0580028232.01.T01:CDS 25.0%
!! AAAAGAATTTGCTTCATTGT+TGG - Chr5:77069352-77069371 MsG0580028232.01.T01:intron 25.0%
!! ACCAATAAAACTTTTGCTTT+AGG - Chr5:77071572-77071591 MsG0580028232.01.T01:intron 25.0%
!! CCAATAAAACTTTTGCTTTA+GGG - Chr5:77071573-77071592 MsG0580028232.01.T01:intron 25.0%
!! GTGTTCCTTATTTAATCTAA+TGG - Chr5:77071268-77071287 MsG0580028232.01.T01:intron 25.0%
!! TCAATGCTGTTTATTTATAG+GGG - Chr5:77070260-77070279 MsG0580028232.01.T01:intron 25.0%
!!! AAATATGTCCATTTTGAAGA+TGG - Chr5:77072054-77072073 MsG0580028232.01.T01:intron 25.0%
!!! AACATTTTTTTTTACATGGG+AGG + Chr5:77073982-77074001 None:intergenic 25.0%
!!! ACATTTTTTTTTACATGGGA+GGG + Chr5:77073981-77074000 None:intergenic 25.0%
!!! CAAAGTTCCAAGTTTTATAT+GGG + Chr5:77071102-77071121 None:intergenic 25.0%
!!! TATATGCTTTTTAAGCAACT+CGG - Chr5:77070013-77070032 MsG0580028232.01.T01:intron 25.0%
!!! TCAAAGTTCCAAGTTTTATA+TGG + Chr5:77071103-77071122 None:intergenic 25.0%
!!! TGCTTTACTTTTTTAGTGTT+TGG - Chr5:77070197-77070216 MsG0580028232.01.T01:intron 25.0%
AAAATAAGGAAATAAGGAGG+AGG + Chr5:77070764-77070783 None:intergenic 30.0%
AAACACCTTCTAAGTTAAAC+TGG - Chr5:77071984-77072003 MsG0580028232.01.T01:intron 30.0%
AACTTAGACAACCTTAGAAA+AGG + Chr5:77069985-77070004 None:intergenic 30.0%
AAGACTAGGGTTATTTGTTT+CGG - Chr5:77072590-77072609 MsG0580028232.01.T01:intron 30.0%
ACATACCTTGGTATTCTTAA+GGG + Chr5:77069743-77069762 None:intergenic 30.0%
ACGGAAAAGAAACACATTAT+AGG + Chr5:77072820-77072839 None:intergenic 30.0%
AGCCCTTAGAAATATAATGA+CGG + Chr5:77073346-77073365 None:intergenic 30.0%
AGGAATAAACAATTATTCCC+AGG - Chr5:77070458-77070477 MsG0580028232.01.T01:intron 30.0%
CAGAAAATAAGGAAATAAGG+AGG + Chr5:77070767-77070786 None:intergenic 30.0%
CTTCTTCCTCAATAACTTAA+TGG + Chr5:77072228-77072247 None:intergenic 30.0%
GAAGAAAACCATCATGTAAT+AGG + Chr5:77071414-77071433 None:intergenic 30.0%
GACATATTTGTAGAGAAAAC+GGG + Chr5:77072043-77072062 None:intergenic 30.0%
GATAACAACAATACATACCT+TGG + Chr5:77069755-77069774 None:intergenic 30.0%
GATGGTATTGTTTGAATATC+AGG - Chr5:77072072-77072091 MsG0580028232.01.T01:intron 30.0%
GGACATATTTGTAGAGAAAA+CGG + Chr5:77072044-77072063 None:intergenic 30.0%
GTTACTCATTGTTGTATGAA+TGG - Chr5:77072660-77072679 MsG0580028232.01.T01:intron 30.0%
TACAATTTAACTCGCTATCT+TGG + Chr5:77072317-77072336 None:intergenic 30.0%
TACATACCTTGGTATTCTTA+AGG + Chr5:77069744-77069763 None:intergenic 30.0%
TACTCATTGTTGTATGAATG+GGG - Chr5:77072662-77072681 MsG0580028232.01.T01:intron 30.0%
TATGAGAACATGAAAGAGAA+AGG - Chr5:77071196-77071215 MsG0580028232.01.T01:intron 30.0%
TCTGTTGCATATATATGTAG+GGG - Chr5:77071757-77071776 MsG0580028232.01.T01:intron 30.0%
TGAAATTGGATTAACCTGAT+CGG + Chr5:77068928-77068947 None:intergenic 30.0%
TGAATTTCATATTACACGGT+TGG + Chr5:77074011-77074030 None:intergenic 30.0%
TGGATGCAAAAATTATTCCT+AGG + Chr5:77071958-77071977 None:intergenic 30.0%
TGGTTGTTGAATATGTGATT+TGG + Chr5:77070741-77070760 None:intergenic 30.0%
TGTTAGACAAGATGATATAG+TGG - Chr5:77069681-77069700 MsG0580028232.01.T01:intron 30.0%
TTCAACACCCATATAAAACT+TGG - Chr5:77071092-77071111 MsG0580028232.01.T01:intron 30.0%
TTGCTGAATATGTGATTTAG+TGG - Chr5:77071159-77071178 MsG0580028232.01.T01:intron 30.0%
! AACTATCGTATTTTGTGTGT+TGG - Chr5:77071440-77071459 MsG0580028232.01.T01:intron 30.0%
! AATAATAGTGTTGAGAGAGT+AGG - Chr5:77071237-77071256 MsG0580028232.01.T01:intron 30.0%
! AGTTTCCAGTTTAACTTAGA+AGG + Chr5:77071992-77072011 None:intergenic 30.0%
! ATAAGAGCATAAGAGGAAAT+GGG + Chr5:77071010-77071029 None:intergenic 30.0%
! ATAATCAACTTTTCCATGGT+GGG - Chr5:77071293-77071312 MsG0580028232.01.T01:intron 30.0%
! GACCGTCATTATATTTCTAA+GGG - Chr5:77073341-77073360 MsG0580028232.01.T01:intron 30.0%
! TATAAGAGCATAAGAGGAAA+TGG + Chr5:77071011-77071030 None:intergenic 30.0%
! TCATATGTTTGTCTTTTCCA+TGG - Chr5:77072258-77072277 MsG0580028232.01.T01:intron 30.0%
! TCTAACTTGTCAAGAAAATC+AGG + Chr5:77069450-77069469 None:intergenic 30.0%
! TGAATTGCAATTGATGGATA+TGG - Chr5:77070159-77070178 MsG0580028232.01.T01:intron 30.0%
! TTGTTGAATATGTGATTTGG+TGG + Chr5:77070738-77070757 None:intergenic 30.0%
! TTTTCCCATCTAATATTCCT+AGG + Chr5:77070416-77070435 None:intergenic 30.0%
!! AATACCCGTGTTTGTTATAA+AGG - Chr5:77070438-77070457 MsG0580028232.01.T01:intron 30.0%
!! AGTGTTTTTATCCAATCAGA+TGG + Chr5:77074053-77074072 None:intergenic 30.0%
!! CAGCTTTTTGAAAGATTACT+TGG - Chr5:77071894-77071913 MsG0580028232.01.T01:intron 30.0%
!! CCCTAAAGCAAAAGTTTTAT+TGG + Chr5:77071576-77071595 None:intergenic 30.0%
!! GGTTGATAATTTAAACTCCT+GGG + Chr5:77071871-77071890 None:intergenic 30.0%
!! TGGTTGATAATTTAAACTCC+TGG + Chr5:77071872-77071891 None:intergenic 30.0%
!! TTCTTTTGTTATAACGCTCA+AGG - Chr5:77069781-77069800 MsG0580028232.01.T01:intron 30.0%
!!! CATTTTTTTTTACATGGGAG+GGG + Chr5:77073980-77073999 None:intergenic 30.0%
!!! TATATATGTAGGGGTGTTTT+AGG - Chr5:77071766-77071785 MsG0580028232.01.T01:intron 30.0%
!!! TATTTTGTGTGTTGGTTTTG+AGG - Chr5:77071448-77071467 MsG0580028232.01.T01:intron 30.0%
AAAAACCCTTCAAACCGTAT+TGG - Chr5:77068773-77068792 MsG0580028232.01.T01:three_prime_UTR 35.0%
AACATGAAACCATAGAGGAA+AGG + Chr5:77072149-77072168 None:intergenic 35.0%
AACTAACTAGAGACGAGAAA+TGG + Chr5:77072505-77072524 None:intergenic 35.0%
AATAAGGTGGCATTTAGCAT+GGG + Chr5:77071334-77071353 None:intergenic 35.0%
AATATGTGATTTAGTGGTGG+TGG - Chr5:77071165-77071184 MsG0580028232.01.T01:intron 35.0%
AATTCCTGTCATTACATTCC+CGG - Chr5:77071922-77071941 MsG0580028232.01.T01:intron 35.0%
ACATGAAACCATAGAGGAAA+GGG + Chr5:77072148-77072167 None:intergenic 35.0%
ACGGACTTACGATAATGTAA+TGG + Chr5:77071722-77071741 None:intergenic 35.0%
ACTATTCATTGTCGGTCTAA+GGG - Chr5:77070360-77070379 MsG0580028232.01.T01:intron 35.0%
AGAACATGAAAGAGAAAGGA+TGG - Chr5:77071200-77071219 MsG0580028232.01.T01:intron 35.0%
AGAAGGTAATTCTTGGGATT+TGG - Chr5:77069600-77069619 MsG0580028232.01.T01:CDS 35.0%
AGATAATACCCTTTCCTCTA+TGG - Chr5:77072137-77072156 MsG0580028232.01.T01:intron 35.0%
AGGAATTAGTTGGGCAAAAA+TGG + Chr5:77072635-77072654 None:intergenic 35.0%
AGGGGTAGTATGCATATAAT+TGG - Chr5:77070278-77070297 MsG0580028232.01.T01:intron 35.0%
ATAATCAACTTTCCCATGGT+GGG + Chr5:77070602-77070621 None:intergenic 35.0%
ATCAAAACCCTGTTATCCTA+AGG - Chr5:77073853-77073872 MsG0580028232.01.T01:intron 35.0%
ATCATGTAATAGGCAGTTGA+GGG + Chr5:77071404-77071423 None:intergenic 35.0%
ATGAATTAAGATTTCCGCGT+TGG + Chr5:77069872-77069891 None:intergenic 35.0%
ATTTGTTTCGGTTGAGAGAT+GGG - Chr5:77072602-77072621 MsG0580028232.01.T01:intron 35.0%
CAAGATGATTGATTGCATAC+CGG + Chr5:77069505-77069524 None:intergenic 35.0%
CACAAATCTACCATATACTC+AGG + Chr5:77069817-77069836 None:intergenic 35.0%
CATAGCGATCAATTAGAGAA+AGG + Chr5:77072953-77072972 None:intergenic 35.0%
CTGAATATGTGATTTAGTGG+TGG - Chr5:77071162-77071181 MsG0580028232.01.T01:intron 35.0%
CTGAGTATATGGTAGATTTG+TGG - Chr5:77069815-77069834 MsG0580028232.01.T01:intron 35.0%
CTTAAAACCACTTTCTTCAC+TGG + Chr5:77072851-77072870 None:intergenic 35.0%
CTTAAGAGACACGAATAAAG+TGG + Chr5:77070825-77070844 None:intergenic 35.0%
GACGGTCCAGAAATTATAAA+AGG + Chr5:77073328-77073347 None:intergenic 35.0%
GACTGTCAATCTATCCTTAA+GGG - Chr5:77073484-77073503 MsG0580028232.01.T01:intron 35.0%
GAGATTCCAAACTTATTCCT+AGG - Chr5:77070396-77070415 MsG0580028232.01.T01:intron 35.0%
GGGGTAGTATGCATATAATT+GGG - Chr5:77070279-77070298 MsG0580028232.01.T01:intron 35.0%
GGTCAGTGAAAATGATCTTT+GGG - Chr5:77069621-77069640 MsG0580028232.01.T01:CDS 35.0%
GGTTGGAATTGCAGAAAATA+AGG + Chr5:77070778-77070797 None:intergenic 35.0%
GTCGAGCACAAAAATTTATC+TGG + Chr5:77073070-77073089 None:intergenic 35.0%
TATGGCAATGATGTAATGGT+TGG + Chr5:77070795-77070814 None:intergenic 35.0%
TATTTGTTTCGGTTGAGAGA+TGG - Chr5:77072601-77072620 MsG0580028232.01.T01:intron 35.0%
TCAAAACCCTGTTATCCTAA+GGG - Chr5:77073854-77073873 MsG0580028232.01.T01:intron 35.0%
TCCACATGGGAAATAATTCT+GGG - Chr5:77069914-77069933 MsG0580028232.01.T01:intron 35.0%
TCTTTGACACTGTTCCAATA+CGG + Chr5:77068790-77068809 None:intergenic 35.0%
TGCAGAAGAAGGTAATTCTT+GGG - Chr5:77069594-77069613 MsG0580028232.01.T01:CDS 35.0%
TGGTCAGTGAAAATGATCTT+TGG - Chr5:77069620-77069639 MsG0580028232.01.T01:CDS 35.0%
TTCCACATGGGAAATAATTC+TGG - Chr5:77069913-77069932 MsG0580028232.01.T01:intron 35.0%
TTGAGCTGTAAATTCCACAT+GGG - Chr5:77069901-77069920 MsG0580028232.01.T01:intron 35.0%
TTGCAGAAGAAGGTAATTCT+TGG - Chr5:77069593-77069612 MsG0580028232.01.T01:CDS 35.0%
TTTAAGCAACTCGGATTTGT+TGG - Chr5:77070022-77070041 MsG0580028232.01.T01:intron 35.0%
! AACATACTTTGAAGACACCA+CGG + Chr5:77071068-77071087 None:intergenic 35.0%
! ACAGTTTTGCTTTGTGTTAG+TGG - Chr5:77070234-77070253 MsG0580028232.01.T01:intron 35.0%
! AGACAAGATGATATAGTGGA+TGG - Chr5:77069685-77069704 MsG0580028232.01.T01:intron 35.0%
! CATAATCAACTTTTCCATGG+TGG - Chr5:77071292-77071311 MsG0580028232.01.T01:intron 35.0%
! GGACCGTCATTATATTTCTA+AGG - Chr5:77073340-77073359 MsG0580028232.01.T01:intron 35.0%
! GGGAATTTGGTAATTGAGAT+GGG + Chr5:77070981-77071000 None:intergenic 35.0%
! TAATCTAGTGTTGAGAGAGT+AGG + Chr5:77070658-77070677 None:intergenic 35.0%
! TGCGTTTATAAGAGCATAAG+AGG + Chr5:77071017-77071036 None:intergenic 35.0%
!! AAATGAAAAGACTGGCTTTG+TGG + Chr5:77070513-77070532 None:intergenic 35.0%
!! AATGAAAAGACTGGCTTTGT+GGG + Chr5:77070512-77070531 None:intergenic 35.0%
!! AGGAAAGGGTATTATCTATC+TGG + Chr5:77072134-77072153 None:intergenic 35.0%
!! CGCAGACAATCATCATTTTT+GGG + Chr5:77072400-77072419 None:intergenic 35.0%
!! TTGAATATGTGATTTGGTGG+TGG + Chr5:77070735-77070754 None:intergenic 35.0%
AATTGAGATGGGAAAGAGTG+TGG + Chr5:77070970-77070989 None:intergenic 40.0%
ACTGTTCCAATACGGTTTGA+AGG + Chr5:77068782-77068801 None:intergenic 40.0%
AGAAAGGGAATGGAAGACTA+GGG - Chr5:77072577-77072596 MsG0580028232.01.T01:intron 40.0%
AGACACGAATAAAGTGGTTG+TGG + Chr5:77070819-77070838 None:intergenic 40.0%
AGACAGACAGATATCTCTCA+GGG + Chr5:77072368-77072387 None:intergenic 40.0%
AGAGTGTGGAAATGAATGAG+AGG + Chr5:77070956-77070975 None:intergenic 40.0%
ATAAGGAAATAAGGAGGAGG+TGG + Chr5:77070761-77070780 None:intergenic 40.0%
ATCAATCATCTTGGAGCTCT+CGG - Chr5:77069512-77069531 MsG0580028232.01.T01:intron 40.0%
ATCATCATCATCGTCGTCAT+CGG + Chr5:77068841-77068860 None:intergenic 40.0%
ATCTACCATATACTCAGGCA+TGG + Chr5:77069812-77069831 None:intergenic 40.0%
ATGAAATGTTCCCACGTTGT+TGG + Chr5:77070541-77070560 None:intergenic 40.0%
ATTCCTAGGATTACCTTTCC+CGG + Chr5:77071944-77071963 None:intergenic 40.0%
ATTCCTGTCATTACATTCCC+GGG - Chr5:77071923-77071942 MsG0580028232.01.T01:intron 40.0%
CAAGTCGATCAACAGAACAA+CGG + Chr5:77069284-77069303 None:intergenic 40.0%
CACTATTCATTGTCGGTCTA+AGG - Chr5:77070359-77070378 MsG0580028232.01.T01:intron 40.0%
CATAATCAACTTTCCCATGG+TGG + Chr5:77070603-77070622 None:intergenic 40.0%
CATCATGTAATAGGCAGTTG+AGG + Chr5:77071405-77071424 None:intergenic 40.0%
CGGTATGCAATCAATCATCT+TGG - Chr5:77069503-77069522 MsG0580028232.01.T01:intron 40.0%
CTCAACTGCCTATTACATGA+TGG - Chr5:77071403-77071422 MsG0580028232.01.T01:intron 40.0%
CTGTTCCAATACGGTTTGAA+GGG + Chr5:77068781-77068800 None:intergenic 40.0%
CTTTCCAGAGTCTTTCTTGT+GGG + Chr5:77073375-77073394 None:intergenic 40.0%
GAATAAAGTGGTTGTGGCTA+TGG + Chr5:77070813-77070832 None:intergenic 40.0%
GAATAAGGTGGCATTTAGCA+TGG + Chr5:77071335-77071354 None:intergenic 40.0%
GACAACCTTAGAAAAGGCTA+TGG + Chr5:77069979-77069998 None:intergenic 40.0%
GCTGTAACATGAAACCATAG+AGG + Chr5:77072154-77072173 None:intergenic 40.0%
GGACATAATCAACTTTCCCA+TGG + Chr5:77070606-77070625 None:intergenic 40.0%
GGACTGTCAATCTATCCTTA+AGG - Chr5:77073483-77073502 MsG0580028232.01.T01:intron 40.0%
GGATGGAATTGCATGCTTTA+TGG - Chr5:77069702-77069721 MsG0580028232.01.T01:intron 40.0%
GTTGAGCTGTAAATTCCACA+TGG - Chr5:77069900-77069919 MsG0580028232.01.T01:intron 40.0%
GTTGTCCCTTAAGAATACCA+AGG - Chr5:77069735-77069754 MsG0580028232.01.T01:intron 40.0%
TATAATTGCCGATCCAAACC+CGG - Chr5:77068737-77068756 MsG0580028232.01.T01:three_prime_UTR 40.0%
TATCCAATCAGATGGCAACA+GGG + Chr5:77074045-77074064 None:intergenic 40.0%
TCATGTAATAGGCAGTTGAG+GGG + Chr5:77071403-77071422 None:intergenic 40.0%
TCATTGTTGTATGAATGGGG+TGG - Chr5:77072665-77072684 MsG0580028232.01.T01:intron 40.0%
TCCCAGAATTATTTCCCATG+TGG + Chr5:77069918-77069937 None:intergenic 40.0%
TCGGTTTATCAGAACACAAC+CGG - Chr5:77069483-77069502 MsG0580028232.01.T01:intron 40.0%
TGGCTATGGCAATGATGTAA+TGG + Chr5:77070799-77070818 None:intergenic 40.0%
TGTGGGAATAAAAAGCTCGT+GGG + Chr5:77070495-77070514 None:intergenic 40.0%
TGTTAGCAGTTTGTGGAAGA+GGG + Chr5:77072749-77072768 None:intergenic 40.0%
TGTTCATCTTCTATTCACCG+TGG - Chr5:77071048-77071067 MsG0580028232.01.T01:intron 40.0%
TTATATCCCCGAAAAAGACC+AGG + Chr5:77072178-77072197 None:intergenic 40.0%
TTATCCAATCAGATGGCAAC+AGG + Chr5:77074046-77074065 None:intergenic 40.0%
TTCAACGTTCAAGCCTTTGA+TGG + Chr5:77071605-77071624 None:intergenic 40.0%
TTCGTGTGTTTGCACAAGAA+GGG - Chr5:77072523-77072542 MsG0580028232.01.T01:intron 40.0%
TTCTTCACTGGAAGAGAGAA+CGG + Chr5:77072839-77072858 None:intergenic 40.0%
TTGCTATATAGCTCACCCAA+TGG + Chr5:77073278-77073297 None:intergenic 40.0%
TTGGGAAGATGTTGACACTT+CGG - Chr5:77069639-77069658 MsG0580028232.01.T01:CDS 40.0%
TTGTGGGAATAAAAAGCTCG+TGG + Chr5:77070496-77070515 None:intergenic 40.0%
TTTAGGGAGATTGCCATCAA+AGG - Chr5:77071589-77071608 MsG0580028232.01.T01:intron 40.0%
TTTGACTCCAAATCAACTCC+AGG - Chr5:77072985-77073004 MsG0580028232.01.T01:intron 40.0%
! AAGCGTTGTTGATGAGTTCA+AGG + Chr5:77068815-77068834 None:intergenic 40.0%
! AATTCTGGGAGTTTCCTGAA+AGG - Chr5:77069928-77069947 MsG0580028232.01.T01:intron 40.0%
! AGCGTTGTTGATGAGTTCAA+GGG + Chr5:77068814-77068833 None:intergenic 40.0%
! CGGGAATTTGGTAATTGAGA+TGG + Chr5:77070982-77071001 None:intergenic 40.0%
! CGTGGGTATAGTTATTTCCT+GGG + Chr5:77070478-77070497 None:intergenic 40.0%
! GCGCAGACAATCATCATTTT+TGG + Chr5:77072401-77072420 None:intergenic 40.0%
! GGGCATAATCAACTTTTCCA+TGG - Chr5:77071289-77071308 MsG0580028232.01.T01:intron 40.0%
! TCGTGGGTATAGTTATTTCC+TGG + Chr5:77070479-77070498 None:intergenic 40.0%
! TCTGATTTGTCAATGCAGCT+TGG - Chr5:77073925-77073944 MsG0580028232.01.T01:intron 40.0%
! TGTTTCTGCTGATGGAGAAA+GGG - Chr5:77072562-77072581 MsG0580028232.01.T01:intron 40.0%
! TTTCTAGAAGCCTGTCAAGA+CGG + Chr5:77073586-77073605 None:intergenic 40.0%
!! AATATGTGATTTGGTGGTGG+TGG + Chr5:77070732-77070751 None:intergenic 40.0%
!! AGAATGCTCTAGAGTGACTT+AGG - Chr5:77073611-77073630 MsG0580028232.01.T01:intron 40.0%
!! CTTAGAAGGTGTTTGTTTCG+TGG + Chr5:77071978-77071997 None:intergenic 40.0%
!! GAATGCTCTAGAGTGACTTA+GGG - Chr5:77073612-77073631 MsG0580028232.01.T01:intron 40.0%
!! TTACAGCTCCTGGTCTTTTT+CGG - Chr5:77072167-77072186 MsG0580028232.01.T01:intron 40.0%
!! TTGATCGCTATGCTTTTTGC+AGG - Chr5:77072961-77072980 MsG0580028232.01.T01:intron 40.0%
!!! AGTGAAGTTTTTTCCCACCA+TGG + Chr5:77071309-77071328 None:intergenic 40.0%
!!! GTCTAAGGGAGTGTTTGTTT+TGG - Chr5:77070374-77070393 MsG0580028232.01.T01:intron 40.0%
AAACAATGTGAGGCGAGTTC+CGG - Chr5:77073950-77073969 MsG0580028232.01.T01:CDS 45.0%
AACACACGATCTTGCTACAG+AGG - Chr5:77072765-77072784 MsG0580028232.01.T01:intron 45.0%
AAGTAACCATCACAGCCACT+TGG + Chr5:77071358-77071377 None:intergenic 45.0%
AATGCCACCTTATTCCCAAG+TGG - Chr5:77071340-77071359 MsG0580028232.01.T01:intron 45.0%
ACAATTCCACGCATCCTTTC+AGG + Chr5:77069945-77069964 None:intergenic 45.0%
ACACACGATCTTGCTACAGA+GGG - Chr5:77072766-77072785 MsG0580028232.01.T01:intron 45.0%
ACCGAATTACAAGCTCACGA+AGG - Chr5:77073659-77073678 MsG0580028232.01.T01:intron 45.0%
ACCTTAGAAAAGGCTATGGC+AGG + Chr5:77069975-77069994 None:intergenic 45.0%
ACTCCAAATCAACTCCAGGA+TGG - Chr5:77072989-77073008 MsG0580028232.01.T01:intron 45.0%
ACTTAAGCCCCAAGCAACTT+GGG + Chr5:77073638-77073657 None:intergenic 45.0%
AGAAGGGAGAGATTGTTGGT+TGG + Chr5:77068886-77068905 None:intergenic 45.0%
AGTAACCATCACAGCCACTT+GGG + Chr5:77071357-77071376 None:intergenic 45.0%
ATAAGAGGAAATGGGCAGTG+CGG + Chr5:77071002-77071021 None:intergenic 45.0%
ATCACAGCCACTTGGGAATA+AGG + Chr5:77071350-77071369 None:intergenic 45.0%
ATGCTTTAGTTGCAGCCCTT+AGG + Chr5:77073872-77073891 None:intergenic 45.0%
CAAGTCACACAACTGCACAA+GGG + Chr5:77069406-77069425 None:intergenic 45.0%
CAGCTTGGAGAAACAATGTG+AGG - Chr5:77073940-77073959 MsG0580028232.01.T01:CDS 45.0%
CCCTTCGTGAGCTTGTAATT+CGG + Chr5:77073663-77073682 None:intergenic 45.0%
CCGAATTACAAGCTCACGAA+GGG - Chr5:77073660-77073679 MsG0580028232.01.T01:intron 45.0%
CTCTCTTCCAGTGAAGAAAG+TGG - Chr5:77072841-77072860 MsG0580028232.01.T01:intron 45.0%
GAAAAAGGGGAAGCTTCGAA+AGG - Chr5:77073201-77073220 MsG0580028232.01.T01:CDS 45.0%
GAACATTTCATTCCCACGTG+GGG - Chr5:77070550-77070569 MsG0580028232.01.T01:intron 45.0%
GACAGACAGATATCTCTCAG+GGG + Chr5:77072367-77072386 None:intergenic 45.0%
GAGAAAGGGAATGGAAGACT+AGG - Chr5:77072576-77072595 MsG0580028232.01.T01:intron 45.0%
GAGACAGACAGATATCTCTC+AGG + Chr5:77072369-77072388 None:intergenic 45.0%
GATCGTGTGTTAGCAGTTTG+TGG + Chr5:77072756-77072775 None:intergenic 45.0%
GCTTGCATTGTTGCAGAAGA+AGG - Chr5:77069583-77069602 MsG0580028232.01.T01:intron 45.0%
GCTTTCCAGAGTCTTTCTTG+TGG + Chr5:77073376-77073395 None:intergenic 45.0%
GGAACATTTCATTCCCACGT+GGG - Chr5:77070549-77070568 MsG0580028232.01.T01:intron 45.0%
GTCTGACTGTGATCAATAGC+AGG - Chr5:77072874-77072893 MsG0580028232.01.T01:intron 45.0%
GTGGGGACATGAAAGAGATA+GGG + Chr5:77070700-77070719 None:intergenic 45.0%
GTGTAGAAGGGAGAGATTGT+TGG + Chr5:77068890-77068909 None:intergenic 45.0%
GTGTTAGCAGTTTGTGGAAG+AGG + Chr5:77072750-77072769 None:intergenic 45.0%
GTTAGCAGTTTGTGGAAGAG+GGG + Chr5:77072748-77072767 None:intergenic 45.0%
GTTCGTGTGTTTGCACAAGA+AGG - Chr5:77072522-77072541 MsG0580028232.01.T01:intron 45.0%
TAGGATGCAACACGATTGCA+AGG + Chr5:77072801-77072820 None:intergenic 45.0%
TATAACTTTGCTCCCATCCC+AGG + Chr5:77073227-77073246 None:intergenic 45.0%
TCGTGTGTTTGCACAAGAAG+GGG - Chr5:77072524-77072543 MsG0580028232.01.T01:intron 45.0%
TGACAAGTTAGAGTGTGCAC+AGG - Chr5:77069458-77069477 MsG0580028232.01.T01:intron 45.0%
TGGCGAGGAAATGAAAAGAC+TGG + Chr5:77070521-77070540 None:intergenic 45.0%
TGGTTTCATGTTACAGCTCC+TGG - Chr5:77072157-77072176 MsG0580028232.01.T01:intron 45.0%
TGTCATTACATTCCCGGGAA+AGG - Chr5:77071928-77071947 MsG0580028232.01.T01:intron 45.0%
TGTGGGGACATGAAAGAGAT+AGG + Chr5:77070701-77070720 None:intergenic 45.0%
TGTTGTATGAATGGGGTGGT+TGG - Chr5:77072669-77072688 MsG0580028232.01.T01:intron 45.0%
TTAGCAGTTTGTGGAAGAGG+GGG + Chr5:77072747-77072766 None:intergenic 45.0%
TTATTCCCAAGTGGCTGTGA+TGG - Chr5:77071349-77071368 MsG0580028232.01.T01:intron 45.0%
TTCCATGGTATGATGCCTGT+AGG - Chr5:77072273-77072292 MsG0580028232.01.T01:intron 45.0%
TTCCTAGGATTACCTTTCCC+GGG + Chr5:77071943-77071962 None:intergenic 45.0%
TTGCAGCCCTTAGGATAACA+GGG + Chr5:77073863-77073882 None:intergenic 45.0%
TTTACATGGGAGGGGTAAAC+CGG + Chr5:77073972-77073991 None:intergenic 45.0%
TTTCCCGGGAATGTAATGAC+AGG + Chr5:77071929-77071948 None:intergenic 45.0%
! AAGAAAGACTCTGGAAAGCC+TGG - Chr5:77073377-77073396 MsG0580028232.01.T01:CDS 45.0%
! AGAAAGACTCTGGAAAGCCT+GGG - Chr5:77073378-77073397 MsG0580028232.01.T01:CDS 45.0%
! GAGTTTTCCGACAACAACCA+TGG - Chr5:77071121-77071140 MsG0580028232.01.T01:intron 45.0%
! GTTTTTCTCTTGACCCGAAC+CGG + Chr5:77068759-77068778 None:intergenic 45.0%
! TATGAATGGGGTGGTTGGTA+CGG - Chr5:77072674-77072693 MsG0580028232.01.T01:intron 45.0%
! TCACCATCCTGGAGTTGATT+TGG + Chr5:77072995-77073014 None:intergenic 45.0%
! TCCTGCCATAGCCTTTTCTA+AGG - Chr5:77069971-77069990 MsG0580028232.01.T01:intron 45.0%
! TTTTCCGACAACAACCATGG+TGG - Chr5:77071124-77071143 MsG0580028232.01.T01:intron 45.0%
! TTTTTCTCTTGACCCGAACC+GGG + Chr5:77068758-77068777 None:intergenic 45.0%
!! ACGTGTACTGTTTCTGCTGA+TGG - Chr5:77072554-77072573 MsG0580028232.01.T01:intron 45.0%
!! CTGCATTGATTAGACCAACG+CGG - Chr5:77069855-77069874 MsG0580028232.01.T01:intron 45.0%
!! CTGTTTCTGCTGATGGAGAA+AGG - Chr5:77072561-77072580 MsG0580028232.01.T01:intron 45.0%
!! GTTGAGTGTGCTTGAGTTGA+TGG - Chr5:77069321-77069340 MsG0580028232.01.T01:intron 45.0%
!! TACAGCTCCTGGTCTTTTTC+GGG - Chr5:77072168-77072187 MsG0580028232.01.T01:intron 45.0%
!! TGATTTAGTGGTGGTGGTGT+GGG - Chr5:77071171-77071190 MsG0580028232.01.T01:intron 45.0%
AAATGGGCAGTGCGGGAATT+TGG + Chr5:77070994-77071013 None:intergenic 50.0%
AACCACTTTGACCACCACCA+TGG + Chr5:77071141-77071160 None:intergenic 50.0%
AACGCCCACAAGAAAGACTC+TGG - Chr5:77073368-77073387 MsG0580028232.01.T01:CDS 50.0%
AAGAGACAGTCAGCCAGAGA+CGG + Chr5:77072440-77072459 None:intergenic 50.0%
ACAGCCACTTGGGAATAAGG+TGG + Chr5:77071347-77071366 None:intergenic 50.0%
ACCACCACCATGGTTGTTGT+CGG + Chr5:77071131-77071150 None:intergenic 50.0%
ACCTTGGGAATGCTCTCAAG+AGG + Chr5:77073697-77073716 None:intergenic 50.0%
ACTTAGGGCCCAAGTTGCTT+GGG - Chr5:77073627-77073646 MsG0580028232.01.T01:intron 50.0%
CACCTACAGGCATCATACCA+TGG + Chr5:77072278-77072297 None:intergenic 50.0%
CATTTCCTCGCCAACAACGT+GGG - Chr5:77070528-77070547 MsG0580028232.01.T01:intron 50.0%
CTCTGCCATGCCTGAGTATA+TGG - Chr5:77069804-77069823 MsG0580028232.01.T01:intron 50.0%
CTGCTGATGGAGAAAGGGAA+TGG - Chr5:77072567-77072586 MsG0580028232.01.T01:intron 50.0%
GACTTAAGCCCCAAGCAACT+TGG + Chr5:77073639-77073658 None:intergenic 50.0%
GAGTTTCCTGAAAGGATGCG+TGG - Chr5:77069936-77069955 MsG0580028232.01.T01:intron 50.0%
GCAAGTCACACAACTGCACA+AGG + Chr5:77069407-77069426 None:intergenic 50.0%
GGGAACATTTCATTCCCACG+TGG - Chr5:77070548-77070567 MsG0580028232.01.T01:intron 50.0%
GGGACATGAAAGAGATAGGG+TGG + Chr5:77070697-77070716 None:intergenic 50.0%
GTTGCAGCCCTTAGGATAAC+AGG + Chr5:77073864-77073883 None:intergenic 50.0%
TAAGAGGAAATGGGCAGTGC+GGG + Chr5:77071001-77071020 None:intergenic 50.0%
TCATTTCCTCGCCAACAACG+TGG - Chr5:77070527-77070546 MsG0580028232.01.T01:intron 50.0%
TCGGTTGAGAGATGGGCATT+GGG - Chr5:77072609-77072628 MsG0580028232.01.T01:intron 50.0%
TTCCCGGGAAAGGTAATCCT+AGG - Chr5:77071938-77071957 MsG0580028232.01.T01:intron 50.0%
TTCGGTTGAGAGATGGGCAT+TGG - Chr5:77072608-77072627 MsG0580028232.01.T01:intron 50.0%
TTGTCCCAAGACTCGTGCTT+GGG - Chr5:77073453-77073472 MsG0580028232.01.T01:intron 50.0%
! AACCTGATCGGCTTCTGGAT+CGG + Chr5:77068916-77068935 None:intergenic 50.0%
! AGTGGAGTTTGTTCCCACCA+TGG - Chr5:77070586-77070605 MsG0580028232.01.T01:intron 50.0%
! GACTGTAGCAAAGCACCTAC+AGG + Chr5:77072291-77072310 None:intergenic 50.0%
! GCAGTTGAGGGGTACAATTG+CGG + Chr5:77071392-77071411 None:intergenic 50.0%
! GGATTAACCTGATCGGCTTC+TGG + Chr5:77068921-77068940 None:intergenic 50.0%
! GGGCTGCAACTAAAGCATTC+TGG - Chr5:77073874-77073893 MsG0580028232.01.T01:intron 50.0%
! GTGGAGTTTGTTCCCACCAT+GGG - Chr5:77070587-77070606 MsG0580028232.01.T01:intron 50.0%
!! AACCATGGTGGTGGTCAAAG+TGG - Chr5:77071136-77071155 MsG0580028232.01.T01:intron 50.0%
!! ACAGCTCCTGGTCTTTTTCG+GGG - Chr5:77072169-77072188 MsG0580028232.01.T01:intron 50.0%
!! ACCTCTTGAGAGCATTCCCA+AGG - Chr5:77073693-77073712 MsG0580028232.01.T01:intron 50.0%
!! GTGATTTAGTGGTGGTGGTG+TGG - Chr5:77071170-77071189 MsG0580028232.01.T01:intron 50.0%
!! TGATTTGGTGGTGGTGGTGT+GGG + Chr5:77070726-77070745 None:intergenic 50.0%
!! TGGGGTTTAGCATGGGTTAG+TGG - Chr5:77070568-77070587 MsG0580028232.01.T01:intron 50.0%
AACCCATGCTAAACCCCACG+TGG + Chr5:77070566-77070585 None:intergenic 55.0%
AAGCTTCGAAAGGCCTGGGA+TGG - Chr5:77073211-77073230 MsG0580028232.01.T01:CDS 55.0%
ACCCATGCTAAACCCCACGT+GGG + Chr5:77070565-77070584 None:intergenic 55.0%
AGCAACCAGACTCACCATCC+TGG + Chr5:77073006-77073025 None:intergenic 55.0%
AGCTTCGAAAGGCCTGGGAT+GGG - Chr5:77073212-77073231 MsG0580028232.01.T01:CDS 55.0%
ATGTTCCCACGTTGTTGGCG+AGG + Chr5:77070536-77070555 None:intergenic 55.0%
CAACTCCAGGATGGTGAGTC+TGG - Chr5:77072998-77073017 MsG0580028232.01.T01:intron 55.0%
CAAGCACGAGTCTTGGGACA+AGG + Chr5:77073454-77073473 None:intergenic 55.0%
CTTAGGGCCCAAGTTGCTTG+GGG - Chr5:77073628-77073647 MsG0580028232.01.T01:intron 55.0%
CTTGTCCCAAGACTCGTGCT+TGG - Chr5:77073452-77073471 MsG0580028232.01.T01:intron 55.0%
GACTTAGGGCCCAAGTTGCT+TGG - Chr5:77073626-77073645 MsG0580028232.01.T01:intron 55.0%
GAGACGAGAAATGGTCACGC+AGG + Chr5:77072496-77072515 None:intergenic 55.0%
GCTTCAGGAGCCCTTCAAGA+GGG + Chr5:77073539-77073558 None:intergenic 55.0%
GGACCCTGTTGCCATCTGAT+TGG - Chr5:77074039-77074058 MsG0580028232.01.T01:CDS 55.0%
GGCACATATGCCCTCCAGAA+GGG - Chr5:77073505-77073524 MsG0580028232.01.T01:intron 55.0%
GTTAGAGTGTGCACAGGCGT+CGG - Chr5:77069464-77069483 MsG0580028232.01.T01:intron 55.0%
TCCCACGTGGGGTTTAGCAT+GGG - Chr5:77070561-77070580 MsG0580028232.01.T01:intron 55.0%
TCCGACAACAACCATGGTGG+TGG - Chr5:77071127-77071146 MsG0580028232.01.T01:intron 55.0%
TGTCCCAAGACTCGTGCTTG+GGG - Chr5:77073454-77073473 MsG0580028232.01.T01:intron 55.0%
TTCCCACGTGGGGTTTAGCA+TGG - Chr5:77070560-77070579 MsG0580028232.01.T01:intron 55.0%
TTGCCGATCCAAACCCGGTT+CGG - Chr5:77068742-77068761 MsG0580028232.01.T01:three_prime_UTR 55.0%
! ACCTGATCGGCTTCTGGATC+GGG + Chr5:77068915-77068934 None:intergenic 55.0%
! CATGGGGTGCTACAGCCATT+GGG - Chr5:77073260-77073279 MsG0580028232.01.T01:intron 55.0%
! CTGGATCGGGAGGTGTAGAA+GGG + Chr5:77068902-77068921 None:intergenic 55.0%
! GGAGGGCATATGTGCCCTTA+AGG + Chr5:77073501-77073520 None:intergenic 55.0%
! TCATGGGGTGCTACAGCCAT+TGG - Chr5:77073259-77073278 MsG0580028232.01.T01:intron 55.0%
! TCTGGATCGGGAGGTGTAGA+AGG + Chr5:77068903-77068922 None:intergenic 55.0%
!! GTGATTTGGTGGTGGTGGTG+TGG + Chr5:77070727-77070746 None:intergenic 55.0%
AGGGGAAGCTTCGAAAGGCC+TGG - Chr5:77073206-77073225 MsG0580028232.01.T01:CDS 60.0%
CTCTTGACCCGAACCGGGTT+TGG + Chr5:77068753-77068772 None:intergenic 60.0%
CTGTCAAGACGGCGCCCTTA+GGG + Chr5:77073575-77073594 None:intergenic 60.0%
GACCCGAACCGGGTTTGGAT+CGG + Chr5:77068748-77068767 None:intergenic 60.0%
GATCTCTGTGCGACCGTCTC+TGG - Chr5:77072424-77072443 MsG0580028232.01.T01:intron 60.0%
GGCTTCAGGAGCCCTTCAAG+AGG + Chr5:77073540-77073559 None:intergenic 60.0%
GGGCACATATGCCCTCCAGA+AGG - Chr5:77073504-77073523 MsG0580028232.01.T01:intron 60.0%
GGGGAAGCTTCGAAAGGCCT+GGG - Chr5:77073207-77073226 MsG0580028232.01.T01:CDS 60.0%
GTCCCAAGACTCGTGCTTGG+GGG - Chr5:77073455-77073474 MsG0580028232.01.T01:intron 60.0%
GTTGAGGCGGCGCCTTTGAA+GGG + Chr5:77073408-77073427 None:intergenic 60.0%
TCACGCAGGACGAGCAGAGA+TGG + Chr5:77072482-77072501 None:intergenic 60.0%
TCAGGAGCCCTTCAAGAGGG+CGG + Chr5:77073536-77073555 None:intergenic 60.0%
TCCCAAGACTCGTGCTTGGG+GGG - Chr5:77073456-77073475 MsG0580028232.01.T01:intron 60.0%
TCCCGATCCAGAAGCCGATC+AGG - Chr5:77068911-77068930 MsG0580028232.01.T01:three_prime_UTR 60.0%
TGAAGGGCTCCTGAAGCCCT+AGG - Chr5:77073542-77073561 MsG0580028232.01.T01:intron 60.0%
TGCCGATCCAAACCCGGTTC+GGG - Chr5:77068743-77068762 MsG0580028232.01.T01:three_prime_UTR 60.0%
TGTCAAGACGGCGCCCTTAG+GGG + Chr5:77073574-77073593 None:intergenic 60.0%
TGTTGAGGCGGCGCCTTTGA+AGG + Chr5:77073409-77073428 None:intergenic 60.0%
! TGATCGGCTTCTGGATCGGG+AGG + Chr5:77068912-77068931 None:intergenic 60.0%
!! TGGTGGTGGTGTGGGTGTGT+GGG + Chr5:77070718-77070737 None:intergenic 60.0%
AGCCCCCCAAGCACGAGTCT+TGG + Chr5:77073461-77073480 None:intergenic 65.0%
AGCCTGGGCGTGCCCTTCAA+AGG - Chr5:77073393-77073412 MsG0580028232.01.T01:CDS 65.0%
CCCTAGGCGCGTACCCCTAA+GGG - Chr5:77073558-77073577 MsG0580028232.01.T01:intron 65.0%
CCTGTCAAGACGGCGCCCTT+AGG + Chr5:77073576-77073595 None:intergenic 65.0%
CGCAGGACGAGCAGAGATGG+CGG + Chr5:77072479-77072498 None:intergenic 65.0%
GCCCCCCAAGCACGAGTCTT+GGG + Chr5:77073460-77073479 None:intergenic 65.0%
GGCTCAGCCGCCCTCTTGAA+GGG - Chr5:77073526-77073545 MsG0580028232.01.T01:intron 65.0%
! CCCTTAGGGGTACGCGCCTA+GGG + Chr5:77073561-77073580 None:intergenic 65.0%
! GGTGGTGGTGTGGGTGTGTG+GGG + Chr5:77070717-77070736 None:intergenic 65.0%
!! CCTAAGGGCGCCGTCTTGAC+AGG - Chr5:77073573-77073592 MsG0580028232.01.T01:intron 65.0%
!! GTGGTGGTGGTGTGGGTGTG+TGG + Chr5:77070719-77070738 None:intergenic 65.0%
AGAGGGCGGCTGAGCCCTTC+TGG + Chr5:77073522-77073541 None:intergenic 70.0%
GACTCGTGCTTGGGGGGCTG+TGG - Chr5:77073462-77073481 MsG0580028232.01.T01:intron 70.0%
GCCCTAGGCGCGTACCCCTA+AGG - Chr5:77073557-77073576 MsG0580028232.01.T01:intron 70.0%
GGCGGCTGAGCCCTTCTGGA+GGG + Chr5:77073518-77073537 None:intergenic 70.0%
GGGCTCAGCCGCCCTCTTGA+AGG - Chr5:77073525-77073544 MsG0580028232.01.T01:intron 70.0%
GGGTACGCGCCTAGGGCTTC+AGG + Chr5:77073554-77073573 None:intergenic 70.0%
! CGCCTTTGAAGGGCACGCCC+AGG + Chr5:77073398-77073417 None:intergenic 70.0%
! GCCCTTAGGGGTACGCGCCT+AGG + Chr5:77073562-77073581 None:intergenic 70.0%
GGGCGGCTGAGCCCTTCTGG+AGG + Chr5:77073519-77073538 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 77068729 77074143 77068729 ID=MsG0580028232.01;Name=MsG0580028232.01
Chr5 mRNA 77068729 77074143 77068729 ID=MsG0580028232.01.T01;Parent=MsG0580028232.01;Name=MsG0580028232.01.T01;_AED=0.46;_eAED=0.46;_QI=0|1|1|1|0.66|0.57|7|214|223
Chr5 exon 77068729 77069024 77068729 ID=MsG0580028232.01.T01:exon:24115;Parent=MsG0580028232.01.T01
Chr5 exon 77069591 77069699 77069591 ID=MsG0580028232.01.T01:exon:24114;Parent=MsG0580028232.01.T01
Chr5 exon 77069862 77069889 77069862 ID=MsG0580028232.01.T01:exon:24113;Parent=MsG0580028232.01.T01
Chr5 exon 77073116 77073273 77073116 ID=MsG0580028232.01.T01:exon:24112;Parent=MsG0580028232.01.T01
Chr5 exon 77073368 77073458 77073368 ID=MsG0580028232.01.T01:exon:24111;Parent=MsG0580028232.01.T01
Chr5 exon 77073940 77074143 77073940 ID=MsG0580028232.01.T01:exon:24110;Parent=MsG0580028232.01.T01
Chr5 CDS 77073940 77074143 77073940 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 CDS 77073368 77073458 77073368 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 CDS 77073116 77073273 77073116 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 CDS 77069862 77069889 77069862 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 CDS 77069591 77069699 77069591 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 CDS 77068943 77069024 77068943 ID=MsG0580028232.01.T01:cds;Parent=MsG0580028232.01.T01
Chr5 three_prime_UTR 77068729 77068942 77068729 ID=MsG0580028232.01.T01:three_prime_utr;Parent=MsG0580028232.01.T01
Gene Sequence

>MsG0580028232.01.T01

ATGGAAGCTATAATTGCCGATCCAAACCCGGTTCGGGTCAAGAGAAAAACCCTTCAAACCGTATTGGAACAGTGTCAAAGAGCCCTTGAACTCATCAACAACGCTTCTTCCGATGACGACGATGATGATGATGAAAACGACGACGTTTCTGATTCCAACCAACAATCTCTCCCTTCTACACCTCCCGATCCAGAAGCCGATCAGTTGTGTGACTTGCTCAAATCTAGACTTGAGTGTCCTGATTTTCTTGACAAGTTAGAGTGTGCACAGGCGTCGGTTTATCAGAACACAACCGAAGAAGGTAATTCTTGGGATTTGGTCAGTGAAAATGATCTTTGGGAAGATGTTGACACTTCGGACGAAGAAGATTATGTTCTTGTTAGACAAGATGATATAGTGGATGGAATTGCATGCTTTATGGCTGCATATTTGTTGTCCCTTAAGAATACCAAGGATTTGACTCCAAATCAACTCCAGGATGCTCTCAGCAAGACATTTTCTGTGAAAAAGAAAAAGGGGAAGCTTCGAAAGGCCTGGGATGGGAGCAAAGTTATATATAATGTTGCATCATGGGGTGCTACAGCCATTGGGATATATCAAAACCCTGTTATCCTAAGGGCTGCAACTAAAGCATTCTGGACTTCTTGTCAAGTGATTTCAAAGCTGCTCTGA

Protein sequence

>MsG0580028232.01.T01

MEAIIADPNPVRVKRKTLQTVLEQCQRALELINNASSDDDDDDDENDDVSDSNQQSLPSTPPDPEADQLCDLLKSRLECPDFLDKLECAQASVYQNTTEEGNSWDLVSENDLWEDVDTSDEEDYVLVRQDDIVDGIACFMAAYLLSLKNTKDLTPNQLQDALSKTFSVKKKKGKLRKAWDGSKVIYNVASWGATAIGIYQNPVILRAATKAFWTSCQVISKLL*