AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022802.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022802.01.T01 MTR_4g094660 96.875 352 10 1 62 413 437 787 0.0 705
MsG0480022802.01.T01 MTR_4g094660 96.875 352 10 1 62 413 251 601 0.0 704
MsG0480022802.01.T01 MTR_2g438150 77.716 359 71 5 60 413 435 789 0.0 563
MsG0480022802.01.T01 MTR_2g438150 77.159 359 73 5 60 413 435 789 0.0 557
MsG0480022802.01.T01 MTR_2g438160 81.622 185 34 0 60 244 435 619 5.99e-103 318
MsG0480022802.01.T01 MTR_6g033165 40.822 365 189 3 72 413 459 819 1.18e-88 286
MsG0480022802.01.T01 MTR_6g007697 40.599 367 193 5 63 413 419 776 3.36e-88 284
MsG0480022802.01.T01 MTR_5g034500 38.378 370 201 5 63 413 421 782 1.07e-82 269
MsG0480022802.01.T01 MTR_5g070670 39.714 350 195 5 76 413 504 849 3.42e-82 269
MsG0480022802.01.T01 MTR_5g071827 40.173 346 186 6 72 413 338 666 8.50e-81 261
MsG0480022802.01.T01 MTR_5g071860 40.173 346 186 6 72 413 426 754 7.42e-80 261
MsG0480022802.01.T01 MTR_3g094090 38.583 381 203 5 63 413 230 609 4.62e-79 256
MsG0480022802.01.T01 MTR_3g094090 38.583 381 203 5 63 413 415 794 9.18e-78 256
MsG0480022802.01.T01 MTR_2g008820 40.060 332 189 4 91 413 519 849 3.66e-77 256
MsG0480022802.01.T01 MTR_8g063840 39.071 366 195 7 66 413 485 840 4.71e-75 250
MsG0480022802.01.T01 MTR_8g099090 39.730 370 190 6 72 413 428 792 1.91e-72 242
MsG0480022802.01.T01 MTR_5g071630 37.861 346 185 7 72 413 406 725 2.85e-69 232
MsG0480022802.01.T01 MTR_8g107510 35.326 368 216 7 64 410 413 779 4.43e-67 228
MsG0480022802.01.T01 MTR_7g108480 33.807 352 199 4 60 411 454 771 1.18e-66 226
MsG0480022802.01.T01 MTR_4g099260 35.809 377 210 7 60 413 448 815 2.87e-65 223
MsG0480022802.01.T01 MTR_5g034590 41.228 228 120 3 29 242 32 259 9.28e-58 193
MsG0480022802.01.T01 MTR_8g088200 34.072 361 211 6 72 413 430 782 1.39e-57 201
MsG0480022802.01.T01 MTR_8g063900 30.523 344 173 4 72 411 462 743 6.87e-57 199
MsG0480022802.01.T01 MTR_8g022130 31.742 356 208 7 62 413 442 766 2.62e-55 195
MsG0480022802.01.T01 MTR_2g438170 56.790 81 26 5 275 350 1 77 2.74e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022802.01.T01 AT2G35060 70.391 358 94 5 60 413 444 793 1.79e-177 515
MsG0480022802.01.T01 AT2G35060 70.391 358 94 5 60 413 443 792 1.98e-177 515
MsG0480022802.01.T01 AT2G35060 70.391 358 94 5 60 413 443 792 1.98e-177 515
MsG0480022802.01.T01 AT2G35060 70.391 358 94 5 60 413 443 792 1.98e-177 515
MsG0480022802.01.T01 AT1G31120 71.667 360 91 6 60 413 442 796 1.92e-173 505
MsG0480022802.01.T01 AT4G19960 63.003 373 121 3 55 413 217 586 2.41e-144 423
MsG0480022802.01.T01 AT4G19960 59.850 401 140 4 27 413 430 823 2.66e-142 426
MsG0480022802.01.T01 AT4G19960 63.003 373 121 3 55 413 438 807 1.30e-141 423
MsG0480022802.01.T01 AT4G19960 63.003 373 121 3 55 413 464 833 1.87e-141 424
MsG0480022802.01.T01 AT3G02050 41.538 390 194 6 50 413 408 789 2.60e-89 287
MsG0480022802.01.T01 AT4G33530 41.092 348 194 4 76 413 281 627 7.21e-86 274
MsG0480022802.01.T01 AT4G33530 41.092 348 194 4 76 413 509 855 4.69e-84 274
MsG0480022802.01.T01 AT2G40540 39.578 379 201 5 63 413 416 794 2.21e-83 271
MsG0480022802.01.T01 AT2G40540 39.578 379 201 5 63 413 416 794 2.21e-83 271
MsG0480022802.01.T01 AT2G40540 39.578 379 201 5 63 413 416 794 2.21e-83 271
MsG0480022802.01.T01 AT2G40540 39.578 379 201 5 63 413 416 794 2.21e-83 271
MsG0480022802.01.T01 AT2G40540 39.578 379 201 5 63 413 416 794 2.21e-83 271
MsG0480022802.01.T01 AT5G09400 41.193 352 192 5 76 413 508 858 5.31e-82 269
MsG0480022802.01.T01 AT1G60160 37.637 364 209 5 56 413 476 827 1.03e-79 262
MsG0480022802.01.T01 AT5G14880 40.110 364 203 4 63 413 420 781 6.11e-79 259
MsG0480022802.01.T01 AT4G23640 38.649 370 193 6 72 413 412 775 2.01e-76 253
MsG0480022802.01.T01 AT1G70300 36.538 364 217 3 63 413 420 782 1.92e-73 244
MsG0480022802.01.T01 AT4G13420 33.523 352 225 1 60 411 441 783 1.35e-66 226
MsG0480022802.01.T01 AT2G30070 51.010 198 97 0 72 269 306 503 2.70e-64 216
MsG0480022802.01.T01 AT2G30070 38.961 77 47 0 337 413 516 592 3.71e-12 68.6
MsG0480022802.01.T01 AT2G30070 51.010 198 97 0 72 269 426 623 1.04e-63 217
MsG0480022802.01.T01 AT2G30070 40.845 71 42 0 343 413 642 712 4.22e-12 68.6

Find 87 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAACTTGAAAGAATTT+TGG 0.137507 4:-76849216 MsG0480022802.01.T01:CDS
AAACCAGCAGACGATTATTT+TGG 0.182988 4:-76848067 MsG0480022802.01.T01:intron
ACAAGGTATCTCTCTTCTTC+CGG 0.262164 4:+76845295 None:intergenic
GCTGGGGTGGTTCACATATT+AGG 0.264983 4:-76844896 MsG0480022802.01.T01:CDS
ATTATATATATGCATTTCTT+AGG 0.280181 4:-76844817 MsG0480022802.01.T01:CDS
TCAGATGAATACAGTTTATA+TGG 0.316978 4:-76845115 MsG0480022802.01.T01:CDS
CTCGGGCTTGGCCCAAGTTT+AGG 0.337026 4:-76845466 MsG0480022802.01.T01:CDS
CAAGGTATCTCTCTTCTTCC+GGG 0.346404 4:+76845296 None:intergenic
CGAAAGATGTGGTAATTCTT+AGG 0.358981 4:+76845259 None:intergenic
ATTATGTTTGTCTGGCATTA+CGG 0.372759 4:-76845544 MsG0480022802.01.T01:CDS
GTCTCGATGGCATGGATTCT+CGG 0.378294 4:-76845484 MsG0480022802.01.T01:CDS
TGCTGCAAAGCAGGCAGCCA+AGG 0.380640 4:-76848001 MsG0480022802.01.T01:CDS
TGGGTTCCTCTTGTAATTGC+CGG 0.384804 4:-76845580 MsG0480022802.01.T01:CDS
ATGGCATGGATTCTCGGGCT+TGG 0.385857 4:-76845478 MsG0480022802.01.T01:CDS
CTTCCGAACTTTAGTTGCCT+TGG 0.396128 4:+76847984 None:intergenic
TTAGGACTTGTTCGTGTACC+TGG 0.405042 4:-76845448 MsG0480022802.01.T01:CDS
GTGTAGACTAGTCCGATTCC+AGG 0.417435 4:+76845430 None:intergenic
TCTTCCGGGACGGTGTAAAC+AGG 0.434145 4:+76845310 None:intergenic
ACTCTTCGTCTTTCTTGTGC+AGG 0.434280 4:+76845209 None:intergenic
GAGTAAAGCTGCTGCAAAGC+AGG 0.435629 4:-76848010 MsG0480022802.01.T01:CDS
TTGAATAACTGCAGGGACGC+TGG 0.441557 4:-76844914 MsG0480022802.01.T01:CDS
TCTCGATGGCATGGATTCTC+GGG 0.451131 4:-76845483 MsG0480022802.01.T01:CDS
CTAACAGTGATATTCACATT+TGG 0.460145 4:+76844986 None:intergenic
CAAATGTGAATATCACTGTT+AGG 0.464701 4:-76844985 MsG0480022802.01.T01:CDS
TATTGGTGTGGCGCTGCCAC+TGG 0.464822 4:-76845690 MsG0480022802.01.T01:CDS
ATATCATGATTAAAATCATA+AGG 0.466363 4:+76845710 None:intergenic
TGAATAACTGCAGGGACGCT+GGG 0.476846 4:-76844913 MsG0480022802.01.T01:CDS
TCAAAGTTAATCAAGGTGGA+TGG 0.480215 4:-76845600 MsG0480022802.01.T01:CDS
CTTGTTCGTGTACCTGGAAT+CGG 0.484864 4:-76845442 MsG0480022802.01.T01:CDS
AGATACCTTGTAAAGAGGAT+TGG 0.486463 4:-76845283 MsG0480022802.01.T01:CDS
TTTCGATGTGTGGCACGGTA+TGG 0.488737 4:-76845241 MsG0480022802.01.T01:CDS
CATTTCTTAGGAAAATATGC+AGG 0.492742 4:-76844805 MsG0480022802.01.T01:CDS
AAGAGAGATACCTTGTAAAG+AGG 0.504738 4:-76845288 MsG0480022802.01.T01:CDS
CAGCCAAGGCAACTAAAGTT+CGG 0.506043 4:-76847987 MsG0480022802.01.T01:CDS
TAGGTCCAATCCTCTTTACA+AGG 0.508685 4:+76845278 None:intergenic
GTAATCTTCAAAGTTAATCA+AGG 0.509932 4:-76845607 MsG0480022802.01.T01:CDS
CACTTGCTTATCATTGATTG+TGG 0.513008 4:-76845650 MsG0480022802.01.T01:CDS
CAAGCTTAACAAACAGTGAA+AGG 0.516927 4:+76845164 None:intergenic
ACAGTGATATTCACATTTGG+CGG 0.519018 4:+76844989 None:intergenic
ACACGAACAAGTCCTAAACT+TGG 0.520151 4:+76845454 None:intergenic
CACAGTTGTGATGGCAAGGA+GGG 0.523327 4:-76844870 MsG0480022802.01.T01:CDS
CAGTTTATATGGAGGACAGC+AGG 0.530247 4:-76845104 MsG0480022802.01.T01:CDS
CAAAGTTAATCAAGGTGGAT+GGG 0.539107 4:-76845599 MsG0480022802.01.T01:CDS
TGTTAAGCTTGAATCTATGA+TGG 0.539727 4:-76845152 MsG0480022802.01.T01:CDS
ACTTACTTGTTAATGAAATG+TGG 0.541911 4:-76849243 MsG0480022802.01.T01:CDS
CATGAGAGTCTCTTAAATGT+TGG 0.554708 4:-76844755 MsG0480022802.01.T01:CDS
ACAACAACAGAATGGATGGC+TGG 0.560974 4:+76845355 None:intergenic
AGGTCCTGCGGTCAAGTAAG+TGG 0.564330 4:-76844965 MsG0480022802.01.T01:CDS
CCTTCCTGTTTACACCGTCC+CGG 0.569084 4:-76845314 MsG0480022802.01.T01:CDS
TTGGCCACTTACTTGACCGC+AGG 0.570429 4:+76844961 None:intergenic
CAAGTAAGTGGCCAAACCGA+GGG 0.574154 4:-76844953 MsG0480022802.01.T01:CDS
CAACAGAATGGATGGCTGGT+AGG 0.574816 4:+76845359 None:intergenic
TAACTGCAGGGACGCTGGGG+TGG 0.576829 4:-76844909 MsG0480022802.01.T01:CDS
GTATCTCTCTTCTTCCGGGA+CGG 0.583221 4:+76845300 None:intergenic
GTCTACACAGAACTTGCAAG+TGG 0.583444 4:-76845415 MsG0480022802.01.T01:CDS
AGAATGGATGGCTGGTAGGT+TGG 0.583797 4:+76845363 None:intergenic
ATTAGGAAACACAGTTGTGA+TGG 0.587624 4:-76844879 MsG0480022802.01.T01:CDS
TACTCTGTCGATATTCAGCA+AGG 0.588341 4:+76848028 None:intergenic
GAAACACAGTTGTGATGGCA+AGG 0.591010 4:-76844874 MsG0480022802.01.T01:CDS
GTGATATTCACATTTGGCGG+CGG 0.592182 4:+76844992 None:intergenic
TCAAGTAAGTGGCCAAACCG+AGG 0.600769 4:-76844954 MsG0480022802.01.T01:CDS
TTACCACATCTTTCGATGTG+TGG 0.605821 4:-76845251 MsG0480022802.01.T01:CDS
CACGAACAAGTCCTAAACTT+GGG 0.614583 4:+76845455 None:intergenic
ATAGTAAAGTCTCGATGGCA+TGG 0.620677 4:-76845492 MsG0480022802.01.T01:CDS
AATATCACTGTTAGGTCCTG+CGG 0.624494 4:-76844977 MsG0480022802.01.T01:CDS
AAGCACGACTTCTTCGAATG+TGG 0.624780 4:-76845059 MsG0480022802.01.T01:CDS
AATCAATGATAAGCAAGTGA+AGG 0.625371 4:+76845654 None:intergenic
ATTTCTTAGGAAAATATGCA+GGG 0.625694 4:-76844804 MsG0480022802.01.T01:CDS
AACACTCCGGCAATTACAAG+AGG 0.633389 4:+76845574 None:intergenic
ATCTTCAAAGTTAATCAAGG+TGG 0.637689 4:-76845604 MsG0480022802.01.T01:CDS
AATGCATAGTAAAGTCTCGA+TGG 0.638063 4:-76845497 MsG0480022802.01.T01:CDS
AAGCTTGAATCTATGATGGA+AGG 0.641141 4:-76845148 MsG0480022802.01.T01:CDS
GAATAACTGCAGGGACGCTG+GGG 0.645282 4:-76844912 MsG0480022802.01.T01:CDS
ACATCTTTCGATGTGTGGCA+CGG 0.647935 4:-76845246 MsG0480022802.01.T01:CDS
GATGAATACAGTTTATATGG+AGG 0.656772 4:-76845112 MsG0480022802.01.T01:CDS
CCGGGACGGTGTAAACAGGA+AGG 0.657637 4:+76845314 None:intergenic
TTATATGGAGGACAGCAGGA+TGG 0.666470 4:-76845100 MsG0480022802.01.T01:CDS
ACACAGTTGTGATGGCAAGG+AGG 0.669872 4:-76844871 MsG0480022802.01.T01:CDS
TTTGTTAACAGGTACTGCAG+TGG 0.676356 4:-76845758 MsG0480022802.01.T01:intron
GTGCCACACATCGAAAGATG+TGG 0.686236 4:+76845248 None:intergenic
GTGATGAAATGAGAAAAGAT+CGG 0.689117 4:+76845385 None:intergenic
AAGTAAGTGGCCAAACCGAG+GGG 0.689786 4:-76844952 MsG0480022802.01.T01:CDS
ATGAAATGAGAAAAGATCGG+TGG 0.702922 4:+76845388 None:intergenic
AGTAAGTGGCCAAACCGAGG+GGG 0.709182 4:-76844951 MsG0480022802.01.T01:CDS
ACATTTAAGAGACTCTCATG+AGG 0.718347 4:+76844758 None:intergenic
GATGGCGTGTTGAATAACAA+CGG 0.731429 4:-76845082 MsG0480022802.01.T01:CDS
AGGCGAGTACAAGAATCCAG+TGG 0.751362 4:+76845674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATGAAAATAATAGA+AGG + Chr4:76845056-76845075 None:intergenic 10.0%
!! AATGAAAATTGTTTCAATAT+TGG - Chr4:76847659-76847678 MsG0480022802.01.T01:intron 15.0%
!! ATATATCTTTAAATTCTGAA+AGG + Chr4:76846621-76846640 None:intergenic 15.0%
!! ATATCATGATTAAAATCATA+AGG + Chr4:76848291-76848310 None:intergenic 15.0%
!! ATTATATATATGCATTTCTT+AGG - Chr4:76849181-76849200 MsG0480022802.01.T01:intron 15.0%
!! ATTGAATTAACATTAAAAAC+AGG + Chr4:76846767-76846786 None:intergenic 15.0%
!! ATTTGATAAATTAACCAATT+TGG - Chr4:76846416-76846435 MsG0480022802.01.T01:intron 15.0%
!! TTTCAGAATTTAAAGATATA+TGG - Chr4:76846620-76846639 MsG0480022802.01.T01:intron 15.0%
!!! ATCTACAAATTTTAATTTTG+TGG - Chr4:76846253-76846272 MsG0480022802.01.T01:intron 15.0%
!!! TATGATTTTAATCATGATAT+TGG - Chr4:76848291-76848310 MsG0480022802.01.T01:intron 15.0%
!!! TTCTTTATTTTATTTGGAAT+AGG + Chr4:76848179-76848198 None:intergenic 15.0%
!! AGGAAATGGTTAAAATTTAA+TGG + Chr4:76847333-76847352 None:intergenic 20.0%
!! GATACAATAATTTAGCATTA+AGG - Chr4:76845452-76845471 MsG0480022802.01.T01:CDS 20.0%
!! TCAGAATTTAATTGAAATCA+AGG - Chr4:76845819-76845838 MsG0480022802.01.T01:intron 20.0%
!! TGGCAAATTAAAACATAAAA+AGG + Chr4:76845385-76845404 None:intergenic 20.0%
!! TGTTATAAAACATACACATT+GGG - Chr4:76847699-76847718 MsG0480022802.01.T01:intron 20.0%
!! TTGATTTCAATTAAATTCTG+AGG + Chr4:76845820-76845839 None:intergenic 20.0%
!! TTGTTATAAAACATACACAT+TGG - Chr4:76847698-76847717 MsG0480022802.01.T01:intron 20.0%
!!! AATATTTTTGATTTCCACTA+TGG + Chr4:76845569-76845588 None:intergenic 20.0%
!!! ATCACTGATTTTTCTTTTAT+AGG - Chr4:76846213-76846232 MsG0480022802.01.T01:intron 20.0%
!!! ATTTGAACTTGAAAGAATTT+TGG - Chr4:76844782-76844801 MsG0480022802.01.T01:CDS 20.0%
!!! GATTTTTCTTTTATAGGTAT+TGG - Chr4:76846219-76846238 MsG0480022802.01.T01:intron 20.0%
!!! TGAATTTACAATTTGTTAAC+AGG - Chr4:76848229-76848248 MsG0480022802.01.T01:intron 20.0%
!!! TTTCATTTTCATTTTTTAGC+AGG + Chr4:76847646-76847665 None:intergenic 20.0%
!!! TTTTTATCATTATGTTTGTC+TGG - Chr4:76848446-76848465 MsG0480022802.01.T01:intron 20.0%
! AAAAATTCATTCGATCTTCT+CGG - Chr4:76845311-76845330 MsG0480022802.01.T01:CDS 25.0%
! AAGTAAAATTCATAAGCAGA+AGG - Chr4:76846072-76846091 MsG0480022802.01.T01:intron 25.0%
! ACCAACAAAACAAAACAAAA+AGG + Chr4:76847895-76847914 None:intergenic 25.0%
! AGTAAAATTCATAAGCAGAA+GGG - Chr4:76846073-76846092 MsG0480022802.01.T01:intron 25.0%
! ATACAAAAACAACAACAGAA+TGG + Chr4:76848654-76848673 None:intergenic 25.0%
! ATTTCTTAGGAAAATATGCA+GGG - Chr4:76849194-76849213 MsG0480022802.01.T01:intron 25.0%
! CATAATGATAAAAAACACTC+CGG + Chr4:76848440-76848459 None:intergenic 25.0%
! CTCATGACGATATTATAATA+AGG + Chr4:76847384-76847403 None:intergenic 25.0%
! GAGCAGAATTCTTATATATA+TGG - Chr4:76845026-76845045 MsG0480022802.01.T01:CDS 25.0%
! GGAAATCAAAAATATTTCAC+CGG - Chr4:76845573-76845592 MsG0480022802.01.T01:CDS 25.0%
! GTAATCTTCAAAGTTAATCA+AGG - Chr4:76848391-76848410 MsG0480022802.01.T01:intron 25.0%
! TATCTCTTAATAAAGTTCAC+TGG - Chr4:76847081-76847100 MsG0480022802.01.T01:intron 25.0%
! TCAGATGAATACAGTTTATA+TGG - Chr4:76848883-76848902 MsG0480022802.01.T01:intron 25.0%
! TTTGTGGAATTGTCATAATT+TGG - Chr4:76846269-76846288 MsG0480022802.01.T01:intron 25.0%
!! ACTTACTTGTTAATGAAATG+TGG - Chr4:76844755-76844774 MsG0480022802.01.T01:CDS 25.0%
!! ACTTGAAAGAATTTTGGATT+TGG - Chr4:76844788-76844807 MsG0480022802.01.T01:CDS 25.0%
!! AGAAAAATCAGTGATTTTTG+TGG + Chr4:76846208-76846227 None:intergenic 25.0%
!! ATATTTTCGGTATTTCAGTT+GGG - Chr4:76844979-76844998 MsG0480022802.01.T01:CDS 25.0%
!! ATGTCAAATTTTTACAAGAG+AGG + Chr4:76847741-76847760 None:intergenic 25.0%
!! CTTGAAAGAATTTTGGATTT+GGG - Chr4:76844789-76844808 MsG0480022802.01.T01:CDS 25.0%
!! TGAAAATCGTTTAAGTTTCA+AGG + Chr4:76846156-76846175 None:intergenic 25.0%
!! TGAATTTTTGAATAACTGCA+GGG - Chr4:76849077-76849096 MsG0480022802.01.T01:intron 25.0%
!! TGAGATTTTAGATGAGAAAT+GGG - Chr4:76844828-76844847 MsG0480022802.01.T01:CDS 25.0%
!! TTGAATTTTTGAATAACTGC+AGG - Chr4:76849076-76849095 MsG0480022802.01.T01:intron 25.0%
!! TTGAGATTTTAGATGAGAAA+TGG - Chr4:76844827-76844846 MsG0480022802.01.T01:CDS 25.0%
!! TTTTAATCATGATATTGGTG+TGG - Chr4:76848296-76848315 MsG0480022802.01.T01:intron 25.0%
!!! ACCTTTTTGTTTTGTTTTGT+TGG - Chr4:76847891-76847910 MsG0480022802.01.T01:intron 25.0%
!!! GAGAAAGGTTTTTATTTGTT+TGG + Chr4:76847186-76847205 None:intergenic 25.0%
AAAAACAACAACAGAATGGA+TGG + Chr4:76848650-76848669 None:intergenic 30.0%
AAGGCAAACTAGTTAATTCA+AGG + Chr4:76847580-76847599 None:intergenic 30.0%
AATCAATGATAAGCAAGTGA+AGG + Chr4:76848347-76848366 None:intergenic 30.0%
AATTATTAAATGCCCATGCT+AGG - Chr4:76847797-76847816 MsG0480022802.01.T01:intron 30.0%
ACATCTCACAAAAGCAAAAA+TGG - Chr4:76845539-76845558 MsG0480022802.01.T01:CDS 30.0%
ACTAAGAACATGCAAAATAG+AGG + Chr4:76846715-76846734 None:intergenic 30.0%
AGCATGGGCATTTAATAATT+GGG + Chr4:76847797-76847816 None:intergenic 30.0%
AGTCTATATTGCCTATTCAA+TGG - Chr4:76847110-76847129 MsG0480022802.01.T01:intron 30.0%
ATATCACTCTTTATACCAAC+AGG - Chr4:76845723-76845742 MsG0480022802.01.T01:CDS 30.0%
ATCTTCAAAGTTAATCAAGG+TGG - Chr4:76848394-76848413 MsG0480022802.01.T01:intron 30.0%
ATTATGTTTGTCTGGCATTA+CGG - Chr4:76848454-76848473 MsG0480022802.01.T01:intron 30.0%
ATTGTGTCTACGGAATAAAA+TGG + Chr4:76846790-76846809 None:intergenic 30.0%
CAAATGTGAATATCACTGTT+AGG - Chr4:76849013-76849032 MsG0480022802.01.T01:intron 30.0%
CATTTCTTAGGAAAATATGC+AGG - Chr4:76849193-76849212 MsG0480022802.01.T01:intron 30.0%
CTAACAGTGATATTCACATT+TGG + Chr4:76849015-76849034 None:intergenic 30.0%
CTAAGAACATGCAAAATAGA+GGG + Chr4:76846714-76846733 None:intergenic 30.0%
GATGAATACAGTTTATATGG+AGG - Chr4:76848886-76848905 MsG0480022802.01.T01:intron 30.0%
GGTAAAACTTTGACATACAT+GGG - Chr4:76846468-76846487 MsG0480022802.01.T01:intron 30.0%
GGTCAGATATTCTATGTATA+GGG - Chr4:76849264-76849283 MsG0480022802.01.T01:CDS 30.0%
GTAAAATTCATAAGCAGAAG+GGG - Chr4:76846074-76846093 MsG0480022802.01.T01:intron 30.0%
GTCTATATTGCCTATTCAAT+GGG - Chr4:76847111-76847130 MsG0480022802.01.T01:intron 30.0%
GTGATGAAATGAGAAAAGAT+CGG + Chr4:76848616-76848635 None:intergenic 30.0%
TAGAGATGCAAACAAAATAC+AGG - Chr4:76846662-76846681 MsG0480022802.01.T01:intron 30.0%
TAGAGGGCAAAGAAAAATAA+TGG + Chr4:76846698-76846717 None:intergenic 30.0%
TAGCATGGGCATTTAATAAT+TGG + Chr4:76847798-76847817 None:intergenic 30.0%
TCTATATTGCCTATTCAATG+GGG - Chr4:76847112-76847131 MsG0480022802.01.T01:intron 30.0%
TGGTAAAACTTTGACATACA+TGG - Chr4:76846467-76846486 MsG0480022802.01.T01:intron 30.0%
TGGTCAGATATTCTATGTAT+AGG - Chr4:76849263-76849282 MsG0480022802.01.T01:CDS 30.0%
TGTTAAGCTTGAATCTATGA+TGG - Chr4:76848846-76848865 MsG0480022802.01.T01:intron 30.0%
TTCATGCAGGAGATAAATTA+GGG + Chr4:76847844-76847863 None:intergenic 30.0%
TTGAAGACAATCCTTATACT+GGG + Chr4:76846596-76846615 None:intergenic 30.0%
TTTGAAGACAATCCTTATAC+TGG + Chr4:76846597-76846616 None:intergenic 30.0%
TTTGTTTGGAAAGTCATGAT+AGG + Chr4:76847144-76847163 None:intergenic 30.0%
! AAATTCTGAGGAATGTTGTT+GGG + Chr4:76845808-76845827 None:intergenic 30.0%
! AACTCTTTTGGCAAATTCAA+AGG - Chr4:76845632-76845651 MsG0480022802.01.T01:CDS 30.0%
! AAGTAACGCATGGATATTTT+CGG - Chr4:76844966-76844985 MsG0480022802.01.T01:CDS 30.0%
! ATGTAACTATGAATGCCTTT+TGG + Chr4:76847056-76847075 None:intergenic 30.0%
! ATTCAAAGGCAAGTTTTTCT+TGG - Chr4:76845646-76845665 MsG0480022802.01.T01:CDS 30.0%
! ATTTTCAATTTGACAGCCTT+AGG - Chr4:76846169-76846188 MsG0480022802.01.T01:intron 30.0%
! GAGATTTTAGATGAGAAATG+GGG - Chr4:76844829-76844848 MsG0480022802.01.T01:CDS 30.0%
! GATATTTTCGGTATTTCAGT+TGG - Chr4:76844978-76844997 MsG0480022802.01.T01:CDS 30.0%
! TAAATTCTGAGGAATGTTGT+TGG + Chr4:76845809-76845828 None:intergenic 30.0%
! TCAATTGAGTGATCACATTT+TGG + Chr4:76846124-76846143 None:intergenic 30.0%
! TGAAAATCGTTCAAGTTTCA+AGG + Chr4:76846396-76846415 None:intergenic 30.0%
! TGGAAGTCTAAAATCCAAAT+TGG + Chr4:76846813-76846832 None:intergenic 30.0%
! TTCAAAGGCAAGTTTTTCTT+GGG - Chr4:76845647-76845666 MsG0480022802.01.T01:CDS 30.0%
! TTTTCGCTGTTATAGTTAGT+TGG + Chr4:76848135-76848154 None:intergenic 30.0%
!! TAAGACAGAAAGCATTGAAT+TGG + Chr4:76845405-76845424 None:intergenic 30.0%
!!! GTTATTAGTTTTGAGGATGA+AGG - Chr4:76846350-76846369 MsG0480022802.01.T01:intron 30.0%
AAAGCCTTTCCGTATAATGA+TGG - Chr4:76847542-76847561 MsG0480022802.01.T01:intron 35.0%
AACAAACATGTAGTTCATGC+AGG + Chr4:76847857-76847876 None:intergenic 35.0%
AAGAGAGATACCTTGTAAAG+AGG - Chr4:76848710-76848729 MsG0480022802.01.T01:intron 35.0%
AAGCCTTTCCGTATAATGAT+GGG - Chr4:76847543-76847562 MsG0480022802.01.T01:intron 35.0%
AATGCATAGTAAAGTCTCGA+TGG - Chr4:76848501-76848520 MsG0480022802.01.T01:intron 35.0%
ACAGTGATATTCACATTTGG+CGG + Chr4:76849012-76849031 None:intergenic 35.0%
ACATTTAAGAGACTCTCATG+AGG + Chr4:76849243-76849262 None:intergenic 35.0%
ACCAATTTGGCATTATTACC+TGG - Chr4:76846429-76846448 MsG0480022802.01.T01:intron 35.0%
ACCAGGTAATAATGCCAAAT+TGG + Chr4:76846433-76846452 None:intergenic 35.0%
AGTGAGTTTCAAGCAAATGT+TGG + Chr4:76847409-76847428 None:intergenic 35.0%
AGTTTCTATCTGCTAGAGAA+AGG + Chr4:76847201-76847220 None:intergenic 35.0%
ATGAAATGAGAAAAGATCGG+TGG + Chr4:76848613-76848632 None:intergenic 35.0%
ATGCTCAAAACTGTTTCAAG+AGG - Chr4:76846926-76846945 MsG0480022802.01.T01:intron 35.0%
ATTAGGAAACACAGTTGTGA+TGG - Chr4:76849119-76849138 MsG0480022802.01.T01:intron 35.0%
ATTTGGCATTATTACCTGGT+TGG - Chr4:76846433-76846452 MsG0480022802.01.T01:intron 35.0%
CAAAGTTAATCAAGGTGGAT+GGG - Chr4:76848399-76848418 MsG0480022802.01.T01:intron 35.0%
CAAGCTTAACAAACAGTGAA+AGG + Chr4:76848837-76848856 None:intergenic 35.0%
CAGACAAATCTGACTTAACA+TGG + Chr4:76846833-76846852 None:intergenic 35.0%
CAGAGATAATTCGCTATAAC+AGG + Chr4:76847615-76847634 None:intergenic 35.0%
CATATCATGAGTTTGTGTCT+AGG - Chr4:76847764-76847783 MsG0480022802.01.T01:intron 35.0%
CATCTCTACTAAACTAGCTA+AGG + Chr4:76846650-76846669 None:intergenic 35.0%
CATGAGAGTCTCTTAAATGT+TGG - Chr4:76849243-76849262 MsG0480022802.01.T01:CDS 35.0%
CATTTGCTTGAAACTCACTT+AGG - Chr4:76847410-76847429 MsG0480022802.01.T01:intron 35.0%
CGAAAGATGTGGTAATTCTT+AGG + Chr4:76848742-76848761 None:intergenic 35.0%
CTAGACACAAACTCATGATA+TGG + Chr4:76847766-76847785 None:intergenic 35.0%
CTATATTGCCTATTCAATGG+GGG - Chr4:76847113-76847132 MsG0480022802.01.T01:intron 35.0%
GCAAAAATGGTTTACCATAG+TGG - Chr4:76845552-76845571 MsG0480022802.01.T01:CDS 35.0%
GTTAAAATCTGCGCAACTTA+AGG + Chr4:76844933-76844952 None:intergenic 35.0%
GTTAGATTTACCAACCATTC+TGG + Chr4:76846525-76846544 None:intergenic 35.0%
GTTATAGTTAGTTGGTTGTC+CGG + Chr4:76848127-76848146 None:intergenic 35.0%
GTTCATGCAGGAGATAAATT+AGG + Chr4:76847845-76847864 None:intergenic 35.0%
TCAAAGTTAATCAAGGTGGA+TGG - Chr4:76848398-76848417 MsG0480022802.01.T01:intron 35.0%
TCATGCAGGAGATAAATTAG+GGG + Chr4:76847843-76847862 None:intergenic 35.0%
TCCAAATTGGATTGTGTCTA+CGG + Chr4:76846800-76846819 None:intergenic 35.0%
TGAAGACAATCCTTATACTG+GGG + Chr4:76846595-76846614 None:intergenic 35.0%
TGAATTTGCCAAAAGAGTTC+CGG + Chr4:76845631-76845650 None:intergenic 35.0%
TGCAGCACAAGAATGAAAAT+CGG + Chr4:76845190-76845209 None:intergenic 35.0%
TGGTAATCCACAAAATCCTA+AGG + Chr4:76846188-76846207 None:intergenic 35.0%
TGTGTTAGTTAAGTAACGCA+TGG - Chr4:76844956-76844975 MsG0480022802.01.T01:CDS 35.0%
TTGATTATCCCTTTCACTAG+AGG + Chr4:76847511-76847530 None:intergenic 35.0%
! AAACCAGCAGACGATTATTT+TGG - Chr4:76845931-76845950 MsG0480022802.01.T01:intron 35.0%
! AAGCTTGAATCTATGATGGA+AGG - Chr4:76848850-76848869 MsG0480022802.01.T01:intron 35.0%
! ATATGATTTGTGCCTAGCAT+GGG + Chr4:76847812-76847831 None:intergenic 35.0%
! ATCGTTTAAGTTTCAAGGAG+CGG + Chr4:76846151-76846170 None:intergenic 35.0%
! CACTTGCTTATCATTGATTG+TGG - Chr4:76848348-76848367 MsG0480022802.01.T01:intron 35.0%
! TAACTAGTTTGCCTTTGTGT+TGG - Chr4:76847585-76847604 MsG0480022802.01.T01:intron 35.0%
! TGCTTTTGTGAGATGTGATT+GGG + Chr4:76845535-76845554 None:intergenic 35.0%
!! TTGCTTTTGTGAGATGTGAT+TGG + Chr4:76845536-76845555 None:intergenic 35.0%
!!! ATTTAATGGTGCTGCAGTTT+TGG + Chr4:76847319-76847338 None:intergenic 35.0%
!!! CAAAGGGGTTATTAGTTTTG+AGG - Chr4:76846343-76846362 MsG0480022802.01.T01:intron 35.0%
AATATCACTGTTAGGTCCTG+CGG - Chr4:76849021-76849040 MsG0480022802.01.T01:intron 40.0%
ACACGAACAAGTCCTAAACT+TGG + Chr4:76848547-76848566 None:intergenic 40.0%
ACATACATGGGCCTTTCAAA+GGG - Chr4:76846480-76846499 MsG0480022802.01.T01:intron 40.0%
AGATGAGAAATGGGGAAATG+AGG - Chr4:76844837-76844856 MsG0480022802.01.T01:CDS 40.0%
ATAGTAAAGTCTCGATGGCA+TGG - Chr4:76848506-76848525 MsG0480022802.01.T01:intron 40.0%
CAAGCTTATGATTTCCTCAC+TGG - Chr4:76845765-76845784 MsG0480022802.01.T01:intron 40.0%
CACGAACAAGTCCTAAACTT+GGG + Chr4:76848546-76848565 None:intergenic 40.0%
CACTGACAATAGTGCAAACA+CGG - Chr4:76847946-76847965 MsG0480022802.01.T01:intron 40.0%
CATCGTTTATCATCTGCTAG+GGG - Chr4:76848030-76848049 MsG0480022802.01.T01:CDS 40.0%
CATGCAGGAGATAAATTAGG+GGG + Chr4:76847842-76847861 None:intergenic 40.0%
CCATCGTTTATCATCTGCTA+GGG - Chr4:76848029-76848048 MsG0480022802.01.T01:CDS 40.0%
CCTAGCAGATGATAAACGAT+GGG + Chr4:76848031-76848050 None:intergenic 40.0%
CTCACTGGAAAAAGAGTTGA+AGG - Chr4:76845780-76845799 MsG0480022802.01.T01:intron 40.0%
CTCCATGTCCCATCATTATA+CGG + Chr4:76847554-76847573 None:intergenic 40.0%
CTTCAAAGAAGTCAAGTACG+TGG + Chr4:76846303-76846322 None:intergenic 40.0%
GAAGACAATCCTTATACTGG+GGG + Chr4:76846594-76846613 None:intergenic 40.0%
GATGGCGTGTTGAATAACAA+CGG - Chr4:76848916-76848935 MsG0480022802.01.T01:intron 40.0%
GTGACAATTCGTAATCCTGT+TGG + Chr4:76845741-76845760 None:intergenic 40.0%
TACTCTGTCGATATTCAGCA+AGG + Chr4:76845973-76845992 None:intergenic 40.0%
TCATTCGATCTTCTCGGATT+TGG - Chr4:76845317-76845336 MsG0480022802.01.T01:CDS 40.0%
TCCGTAGACACAATCCAATT+TGG - Chr4:76846796-76846815 MsG0480022802.01.T01:intron 40.0%
TGAAACTCACTTAGGACATC+AGG - Chr4:76847418-76847437 MsG0480022802.01.T01:intron 40.0%
TGACTATTGACGCTTGCAAA+GGG - Chr4:76846327-76846346 MsG0480022802.01.T01:intron 40.0%
TGTCCCATCATTATACGGAA+AGG + Chr4:76847549-76847568 None:intergenic 40.0%
TTAAGGTCGAACCCTTTGAA+AGG + Chr4:76846494-76846513 None:intergenic 40.0%
TTACCACATCTTTCGATGTG+TGG - Chr4:76848747-76848766 MsG0480022802.01.T01:intron 40.0%
TTCAAAGGGTTCGACCTTAA+TGG - Chr4:76846494-76846513 MsG0480022802.01.T01:intron 40.0%
TTGACATTACCCCCAGTATA+AGG - Chr4:76846582-76846601 MsG0480022802.01.T01:intron 40.0%
TTGACTATTGACGCTTGCAA+AGG - Chr4:76846326-76846345 MsG0480022802.01.T01:intron 40.0%
! AAATTCAAGTTCATCCCCCT+CGG + Chr4:76849064-76849083 None:intergenic 40.0%
! ACAAGGTATCTCTCTTCTTC+CGG + Chr4:76848706-76848725 None:intergenic 40.0%
! ATATTTCACCGGTTACCCAA+TGG - Chr4:76845584-76845603 MsG0480022802.01.T01:CDS 40.0%
! CATATGATTTGTGCCTAGCA+TGG + Chr4:76847813-76847832 None:intergenic 40.0%
! CTTCAACTCTTTTTCCAGTG+AGG + Chr4:76845782-76845801 None:intergenic 40.0%
! GAGTGACTGAGAAGTTTGTT+TGG + Chr4:76847158-76847177 None:intergenic 40.0%
! GCTTTTGTGAGATGTGATTG+GGG + Chr4:76845534-76845553 None:intergenic 40.0%
! TATTTCACCGGTTACCCAAT+GGG - Chr4:76845585-76845604 MsG0480022802.01.T01:CDS 40.0%
! TCGTTTAAGTTTCAAGGAGC+GGG + Chr4:76846150-76846169 None:intergenic 40.0%
! TTCCGTATAATGATGGGACA+TGG - Chr4:76847549-76847568 MsG0480022802.01.T01:intron 40.0%
! TTGACAGCCTTAGGATTTTG+TGG - Chr4:76846178-76846197 MsG0480022802.01.T01:intron 40.0%
! TTTGTTAACAGGTACTGCAG+TGG - Chr4:76848240-76848259 MsG0480022802.01.T01:intron 40.0%
!! AAGAGAGGCATCTAAATCGA+GGG + Chr4:76847726-76847745 None:intergenic 40.0%
!!! ATGCCTTTTGGTTCGATGAA+CGG + Chr4:76847044-76847063 None:intergenic 40.0%
AACACGGTCACCAAAAACCA+TGG - Chr4:76847962-76847981 MsG0480022802.01.T01:CDS 45.0%
AACACTCCGGCAATTACAAG+AGG + Chr4:76848427-76848446 None:intergenic 45.0%
AAGCACGACTTCTTCGAATG+TGG - Chr4:76848939-76848958 MsG0480022802.01.T01:intron 45.0%
AATGGCATTGCCAGAATGGT+TGG - Chr4:76846512-76846531 MsG0480022802.01.T01:intron 45.0%
ACAACAACAGAATGGATGGC+TGG + Chr4:76848646-76848665 None:intergenic 45.0%
ACATCTTTCGATGTGTGGCA+CGG - Chr4:76848752-76848771 MsG0480022802.01.T01:intron 45.0%
ACTCTTCGTCTTTCTTGTGC+AGG + Chr4:76848792-76848811 None:intergenic 45.0%
AGAAGACTGCAGCAAGGAAA+TGG + Chr4:76847347-76847366 None:intergenic 45.0%
ATCGAAACCAGGCTTAGCTT+GGG + Chr4:76847480-76847499 None:intergenic 45.0%
ATGCGAGTGTGTTTATGGCT+GGG + Chr4:76847276-76847295 None:intergenic 45.0%
ATGTTAACAGCAGAAGTCGC+AGG + Chr4:76847244-76847263 None:intergenic 45.0%
CACAACTACAGGGAAAGCTA+CGG + Chr4:76848072-76848091 None:intergenic 45.0%
CAGAGAATCAGAAGCAAGCA+TGG + Chr4:76845680-76845699 None:intergenic 45.0%
CAGCCAAGGCAACTAAAGTT+CGG - Chr4:76846011-76846030 MsG0480022802.01.T01:intron 45.0%
CAGTTTATATGGAGGACAGC+AGG - Chr4:76848894-76848913 MsG0480022802.01.T01:intron 45.0%
CCATTCTGGCAATGCCATTA+AGG + Chr4:76846511-76846530 None:intergenic 45.0%
CCCATCGTTTATCATCTGCT+AGG - Chr4:76848028-76848047 MsG0480022802.01.T01:CDS 45.0%
CCCTAGCAGATGATAAACGA+TGG + Chr4:76848032-76848051 None:intergenic 45.0%
CCTCCAAAATAATCGTCTGC+TGG + Chr4:76845937-76845956 None:intergenic 45.0%
CCTTAATGGCATTGCCAGAA+TGG - Chr4:76846508-76846527 MsG0480022802.01.T01:intron 45.0%
CTTCCGAACTTTAGTTGCCT+TGG + Chr4:76846017-76846036 None:intergenic 45.0%
CTTGTTCGTGTACCTGGAAT+CGG - Chr4:76848556-76848575 MsG0480022802.01.T01:intron 45.0%
GAAACACAGTTGTGATGGCA+AGG - Chr4:76849124-76849143 MsG0480022802.01.T01:intron 45.0%
GACATACATGGGCCTTTCAA+AGG - Chr4:76846479-76846498 MsG0480022802.01.T01:intron 45.0%
GACTATTGACGCTTGCAAAG+GGG - Chr4:76846328-76846347 MsG0480022802.01.T01:intron 45.0%
GGATCATGCGAGTGTGTTTA+TGG + Chr4:76847281-76847300 None:intergenic 45.0%
GTCTACACAGAACTTGCAAG+TGG - Chr4:76848583-76848602 MsG0480022802.01.T01:intron 45.0%
GTGATATTCACATTTGGCGG+CGG + Chr4:76849009-76849028 None:intergenic 45.0%
GTTTATCATCTGCTAGGGGT+TGG - Chr4:76848034-76848053 MsG0480022802.01.T01:CDS 45.0%
TAGACAAGAAGACTGCAGCA+AGG + Chr4:76847353-76847372 None:intergenic 45.0%
TATTGCCTATTCAATGGGGG+TGG - Chr4:76847116-76847135 MsG0480022802.01.T01:intron 45.0%
TGCAACGCGAGACTGAAAAT+TGG + Chr4:76845161-76845180 None:intergenic 45.0%
TGGGTTCCTCTTGTAATTGC+CGG - Chr4:76848418-76848437 MsG0480022802.01.T01:intron 45.0%
TTATATGGAGGACAGCAGGA+TGG - Chr4:76848898-76848917 MsG0480022802.01.T01:intron 45.0%
TTCGATCTTCTCGGATTTGG+CGG - Chr4:76845320-76845339 MsG0480022802.01.T01:CDS 45.0%
TTGACCAACTCCATGTCCAA+TGG - Chr4:76848094-76848113 MsG0480022802.01.T01:intron 45.0%
TTGGTCAAGGCACAACTACA+GGG + Chr4:76848082-76848101 None:intergenic 45.0%
TTGTCAGTGATCCTAAACGC+TGG + Chr4:76847935-76847954 None:intergenic 45.0%
! ATTGGACATGGAGTTGGTCA+AGG + Chr4:76848095-76848114 None:intergenic 45.0%
! CAAGGTATCTCTCTTCTTCC+GGG + Chr4:76848705-76848724 None:intergenic 45.0%
! TCCATTGTCCGGAACTCTTT+TGG - Chr4:76845620-76845639 MsG0480022802.01.T01:CDS 45.0%
! TTAGGACTTGTTCGTGTACC+TGG - Chr4:76848550-76848569 MsG0480022802.01.T01:intron 45.0%
!! CAAGAGAGGCATCTAAATCG+AGG + Chr4:76847727-76847746 None:intergenic 45.0%
!!! CCAGCAGACGATTATTTTGG+AGG - Chr4:76845934-76845953 MsG0480022802.01.T01:intron 45.0%
!!! TGCCTTTTGGTTCGATGAAC+GGG + Chr4:76847043-76847062 None:intergenic 45.0%
!!! TTTTGGCTTGGTGCTTGTCA+GGG + Chr4:76847302-76847321 None:intergenic 45.0%
!!! ATTATTTTCTTTATTTTATT+TGG + Chr4:76848185-76848204 None:intergenic 5.0%
AAAAACTGAAACGCGAGCGC+GGG + Chr4:76845138-76845157 None:intergenic 50.0%
AAAGTCTCCTACTGCCTCCA+TGG + Chr4:76847982-76848001 None:intergenic 50.0%
AAGTAAGTGGCCAAACCGAG+GGG - Chr4:76849046-76849065 MsG0480022802.01.T01:intron 50.0%
ACACAGTTGTGATGGCAAGG+AGG - Chr4:76849127-76849146 MsG0480022802.01.T01:intron 50.0%
ACGGTCACCAAAAACCATGG+AGG - Chr4:76847965-76847984 MsG0480022802.01.T01:CDS 50.0%
ACTACAGGGAAAGCTACGGA+AGG + Chr4:76848068-76848087 None:intergenic 50.0%
AGAATGGATGGCTGGTAGGT+TGG + Chr4:76848638-76848657 None:intergenic 50.0%
AGGCGAGTACAAGAATCCAG+TGG + Chr4:76848327-76848346 None:intergenic 50.0%
AGGGCTGGAAATCCATTGTC+CGG - Chr4:76845609-76845628 MsG0480022802.01.T01:CDS 50.0%
AGGTACCACCCCCATTGAAT+AGG + Chr4:76847124-76847143 None:intergenic 50.0%
ATGCAAGCTTGCCAGCGTTT+AGG - Chr4:76847921-76847940 MsG0480022802.01.T01:intron 50.0%
CAACAGAATGGATGGCTGGT+AGG + Chr4:76848642-76848661 None:intergenic 50.0%
CAAGTAAGTGGCCAAACCGA+GGG - Chr4:76849045-76849064 MsG0480022802.01.T01:intron 50.0%
CACAGTTGTGATGGCAAGGA+GGG - Chr4:76849128-76849147 MsG0480022802.01.T01:intron 50.0%
CATGCGAGTGTGTTTATGGC+TGG + Chr4:76847277-76847296 None:intergenic 50.0%
CATGTCCAATGGAAGCAAGC+CGG - Chr4:76848105-76848124 MsG0480022802.01.T01:intron 50.0%
CCAAAAACCATGGAGGCAGT+AGG - Chr4:76847972-76847991 MsG0480022802.01.T01:CDS 50.0%
CCACATCTTCTAAGCCAACC+AGG + Chr4:76846450-76846469 None:intergenic 50.0%
GAAAAACTGAAACGCGAGCG+CGG + Chr4:76845139-76845158 None:intergenic 50.0%
GAGTAAAGCTGCTGCAAAGC+AGG - Chr4:76845988-76846007 MsG0480022802.01.T01:intron 50.0%
GATCGAAACCAGGCTTAGCT+TGG + Chr4:76847481-76847500 None:intergenic 50.0%
GATTTCCAGCCCTTCCCATT+GGG + Chr4:76845602-76845621 None:intergenic 50.0%
GCCAAAAGAGTTCCGGACAA+TGG + Chr4:76845624-76845643 None:intergenic 50.0%
GCTGGGGTGGTTCACATATT+AGG - Chr4:76849102-76849121 MsG0480022802.01.T01:intron 50.0%
GCTTCCATTGGACATGGAGT+TGG + Chr4:76848101-76848120 None:intergenic 50.0%
GGAACTTTGATCCATGCCTG+AGG - Chr4:76846947-76846966 MsG0480022802.01.T01:intron 50.0%
GTATCTCTCTTCTTCCGGGA+CGG + Chr4:76848701-76848720 None:intergenic 50.0%
GTCCCGTTCATCGAACCAAA+AGG - Chr4:76847038-76847057 MsG0480022802.01.T01:intron 50.0%
GTCGCAGGACTTGACTCTTT+AGG + Chr4:76847229-76847248 None:intergenic 50.0%
GTCTCGATGGCATGGATTCT+CGG - Chr4:76848514-76848533 MsG0480022802.01.T01:intron 50.0%
GTGCCACACATCGAAAGATG+TGG + Chr4:76848753-76848772 None:intergenic 50.0%
GTTGGTCAAGGCACAACTAC+AGG + Chr4:76848083-76848102 None:intergenic 50.0%
TAACAGGCACGCCAACACAA+AGG + Chr4:76847599-76847618 None:intergenic 50.0%
TATTTCCAATAGCGCGCCTC+AGG + Chr4:76846966-76846985 None:intergenic 50.0%
TCAAGTAAGTGGCCAAACCG+AGG - Chr4:76849044-76849063 MsG0480022802.01.T01:intron 50.0%
TCAGAAGCAAGCATGGCTAC+AGG + Chr4:76845673-76845692 None:intergenic 50.0%
TCCCTTTCACTAGAGGCTGA+CGG + Chr4:76847504-76847523 None:intergenic 50.0%
TCTCGATGGCATGGATTCTC+GGG - Chr4:76848515-76848534 MsG0480022802.01.T01:intron 50.0%
TGAATAACTGCAGGGACGCT+GGG - Chr4:76849085-76849104 MsG0480022802.01.T01:intron 50.0%
TTGAATAACTGCAGGGACGC+TGG - Chr4:76849084-76849103 MsG0480022802.01.T01:intron 50.0%
TTGGGGCAGATCATGCAATC+TGG + Chr4:76847462-76847481 None:intergenic 50.0%
TTTCGATGTGTGGCACGGTA+TGG - Chr4:76848757-76848776 MsG0480022802.01.T01:intron 50.0%
! CCTACTGCCTCCATGGTTTT+TGG + Chr4:76847975-76847994 None:intergenic 50.0%
! GCAGAAGGGGAAGAAAGTGT+TGG - Chr4:76846087-76846106 MsG0480022802.01.T01:intron 50.0%
! GTGTAGACTAGTCCGATTCC+AGG + Chr4:76848571-76848590 None:intergenic 50.0%
! TCGAAACCAGGCTTAGCTTG+GGG + Chr4:76847479-76847498 None:intergenic 50.0%
!! CCTGGTTGGCTTAGAAGATG+TGG - Chr4:76846447-76846466 MsG0480022802.01.T01:intron 50.0%
!!! ATGGTGCTGCAGTTTTGGCT+TGG + Chr4:76847314-76847333 None:intergenic 50.0%
!!! GTTTTGGCTTGGTGCTTGTC+AGG + Chr4:76847303-76847322 None:intergenic 50.0%
AGCCCTTCCCATTGGGTAAC+CGG + Chr4:76845595-76845614 None:intergenic 55.0%
AGGTCCTGCGGTCAAGTAAG+TGG - Chr4:76849033-76849052 MsG0480022802.01.T01:intron 55.0%
AGTAAGTGGCCAAACCGAGG+GGG - Chr4:76849047-76849066 MsG0480022802.01.T01:intron 55.0%
ATGGCATGGATTCTCGGGCT+TGG - Chr4:76848520-76848539 MsG0480022802.01.T01:intron 55.0%
CAAGTTCATCCCCCTCGGTT+TGG + Chr4:76849059-76849078 None:intergenic 55.0%
CCCGTCAGCCTCTAGTGAAA+GGG - Chr4:76847500-76847519 MsG0480022802.01.T01:intron 55.0%
CCCTTTCACTAGAGGCTGAC+GGG + Chr4:76847503-76847522 None:intergenic 55.0%
CCTTCCTGTTTACACCGTCC+CGG - Chr4:76848684-76848703 MsG0480022802.01.T01:intron 55.0%
CTTCTCGGATTTGGCGGCTA+GGG - Chr4:76845326-76845345 MsG0480022802.01.T01:CDS 55.0%
GAATAACTGCAGGGACGCTG+GGG - Chr4:76849086-76849105 MsG0480022802.01.T01:intron 55.0%
GCGCGGGAATGAAAAACGCT+TGG + Chr4:76845122-76845141 None:intergenic 55.0%
GGATTTCCAGCCCTTCCCAT+TGG + Chr4:76845603-76845622 None:intergenic 55.0%
GGTTCGATGAACGGGACTGA+GGG + Chr4:76847035-76847054 None:intergenic 55.0%
TCCCGTCAGCCTCTAGTGAA+AGG - Chr4:76847499-76847518 MsG0480022802.01.T01:intron 55.0%
TCTTCCGGGACGGTGTAAAC+AGG + Chr4:76848691-76848710 None:intergenic 55.0%
TCTTCTCGGATTTGGCGGCT+AGG - Chr4:76845325-76845344 MsG0480022802.01.T01:CDS 55.0%
TGGTTCGATGAACGGGACTG+AGG + Chr4:76847036-76847055 None:intergenic 55.0%
TTGGCCACTTACTTGACCGC+AGG + Chr4:76849040-76849059 None:intergenic 55.0%
! CACCGGTTACCCAATGGGAA+GGG - Chr4:76845590-76845609 MsG0480022802.01.T01:CDS 55.0%
! CGGCTTGCTTCCATTGGACA+TGG + Chr4:76848107-76848126 None:intergenic 55.0%
! GTTGTCCGGCTTGCTTCCAT+TGG + Chr4:76848113-76848132 None:intergenic 55.0%
! TCACCGGTTACCCAATGGGA+AGG - Chr4:76845589-76845608 MsG0480022802.01.T01:CDS 55.0%
AGGCTGACGGGATCGAAACC+AGG + Chr4:76847491-76847510 None:intergenic 60.0%
CCGGGACGGTGTAAACAGGA+AGG + Chr4:76848687-76848706 None:intergenic 60.0%
CTCGGGCTTGGCCCAAGTTT+AGG - Chr4:76848532-76848551 MsG0480022802.01.T01:intron 60.0%
GATCTGCCCCAAGCTAAGCC+TGG - Chr4:76847470-76847489 MsG0480022802.01.T01:intron 60.0%
GGTTACCCAATGGGAAGGGC+TGG - Chr4:76845594-76845613 MsG0480022802.01.T01:CDS 60.0%
TATTGGTGTGGCGCTGCCAC+TGG - Chr4:76848308-76848327 MsG0480022802.01.T01:intron 60.0%
TGCTGCAAAGCAGGCAGCCA+AGG - Chr4:76845997-76846016 MsG0480022802.01.T01:intron 60.0%
TGGCGGCTAGGGTTCTGTGA+TGG - Chr4:76845337-76845356 MsG0480022802.01.T01:CDS 60.0%
CCAATAGCGCGCCTCAGGCA+TGG + Chr4:76846961-76846980 None:intergenic 65.0%
CCATGCCTGAGGCGCGCTAT+TGG - Chr4:76846958-76846977 MsG0480022802.01.T01:intron 65.0%
TAACTGCAGGGACGCTGGGG+TGG - Chr4:76849089-76849108 MsG0480022802.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 76844736 76849284 76844736 ID=MsG0480022802.01;Name=MsG0480022802.01
Chr4 mRNA 76844736 76849284 76844736 ID=MsG0480022802.01.T01;Parent=MsG0480022802.01;Name=MsG0480022802.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|3|0|413
Chr4 exon 76849210 76849284 76849210 ID=MsG0480022802.01.T01:exon:8626;Parent=MsG0480022802.01.T01
Chr4 exon 76847947 76848079 76847947 ID=MsG0480022802.01.T01:exon:8625;Parent=MsG0480022802.01.T01
Chr4 exon 76844736 76845769 76844736 ID=MsG0480022802.01.T01:exon:8624;Parent=MsG0480022802.01.T01
Chr4 CDS 76849210 76849284 76849210 ID=MsG0480022802.01.T01:cds;Parent=MsG0480022802.01.T01
Chr4 CDS 76847947 76848079 76847947 ID=MsG0480022802.01.T01:cds;Parent=MsG0480022802.01.T01
Chr4 CDS 76844736 76845769 76844736 ID=MsG0480022802.01.T01:cds;Parent=MsG0480022802.01.T01
Gene Sequence

>MsG0480022802.01.T01

ATGGAGTTTGATTATGAAAACTTACTTGTTAATGAAATGTGGTTTGATTTGAACTTGAAAGAATTTTGGATTTGGACGATTATTTTGGAGGATTGTCGTGTTCTCCTTGCTGAATATCGACAGAGTAAAGCTGCTGCAAAGCAGGCAGCCAAGGCAACTAAAGTTCGGAAGACAAGTAAAATTCAAAAGAAGACAGCTAAGACGACAAGTACTGCAGTGGTGATTGTCTTTCTCGTTACTACATTCCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCACTGGATTCTTGTACTCGCCTTCACTTGCTTATCATTGATTGTGGAATTGTCATACTTCTTCTCTGTAATCTTCAAAGTTAATCAAGGTGGATGGGTTCCTCTTGTAATTGCCGGAGTGTTTTTTATCATTATGTTTGTCTGGCATTACGGTACAGTGAAACGCTACGAATTTGAAATGCATAGTAAAGTCTCGATGGCATGGATTCTCGGGCTTGGCCCAAGTTTAGGACTTGTTCGTGTACCTGGAATCGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCACCGATCTTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCTGTTGTTGTTTTTGTATGCGTCAAATACCTTCCTGTTTACACCGTCCCGGAAGAAGAGAGATACCTTGTAAAGAGGATTGGACCTAAGAATTACCACATCTTTCGATGTGTGGCACGGTATGGCTACAAAGACCTGCACAAGAAAGACGAAGAGTTTGAGAAAAAACTCTTTGATAACCTTTCACTGTTTGTTAAGCTTGAATCTATGATGGAAGGTTGTTCAGACTCAGATGAATACAGTTTATATGGAGGACAGCAGGATGGCGTGTTGAATAACAACGGAAGCACGACTTCTTCGAATGTGGAGTTAACAATTAACTCGATAGATTCAATAGTACAAGTTCGATCACCGCCGCCAAATGTGAATATCACTGTTAGGTCCTGCGGTCAAGTAAGTGGCCAAACCGAGGGGGATGAACTTGAATTTTTGAATAACTGCAGGGACGCTGGGGTGGTTCACATATTAGGAAACACAGTTGTGATGGCAAGGAGGGATTCAAATATTTTCAAGAAAGTAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATATTCTATGTATAG

Protein sequence

>MsG0480022802.01.T01

MEFDYENLLVNEMWFDLNLKEFWIWTIILEDCRVLLAEYRQSKAAAKQAAKATKVRKTSKIQKKTAKTTSTAVVIVFLVTTFLMILIMILVWRCHWILVLAFTCLSLIVELSYFFSVIFKVNQGGWVPLVIAGVFFIIMFVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERYLVKRIGPKNYHIFRCVARYGYKDLHKKDEEFEKKLFDNLSLFVKLESMMEGCSDSDEYSLYGGQQDGVLNNNGSTTSSNVELTINSIDSIVQVRSPPPNVNITVRSCGQVSGQTEGDELEFLNNCRDAGVVHILGNTVVMARRDSNIFKKVAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV*