Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043298.01.T01 | XP_013444931.1 | 94.444 | 72 | 4 | 0 | 1 | 72 | 567 | 638 | 7.92E-39 | 145 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043298.01.T01 | Q9ZPH9 | 69.444 | 72 | 22 | 0 | 1 | 72 | 559 | 630 | 8.27E-29 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043298.01.T01 | A0A072TP47 | 94.444 | 72 | 4 | 0 | 1 | 72 | 567 | 638 | 3.78e-39 | 145 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048660.01 | MsG0880043298.01 | 0.845156 | 4.842390e-59 | 7.996342e-56 |
MsG0080048748.01 | MsG0880043298.01 | 0.833392 | 5.474726e-56 | 6.296279e-53 |
MsG0080048826.01 | MsG0880043298.01 | 0.800517 | 1.388510e-48 | 6.478309e-46 |
MsG0080048838.01 | MsG0880043298.01 | 0.809016 | 2.330577e-50 | 1.352957e-47 |
MsG0080048849.01 | MsG0880043298.01 | 0.845034 | 5.222248e-59 | 8.591451e-56 |
MsG0080048938.01 | MsG0880043298.01 | 0.803976 | 2.695651e-49 | 1.373548e-46 |
MsG0080049002.01 | MsG0880043298.01 | 0.801064 | 1.073924e-48 | 5.080770e-46 |
MsG0080049069.01 | MsG0880043298.01 | 0.818422 | 1.976415e-52 | 1.478881e-49 |
MsG0180000129.01 | MsG0880043298.01 | 0.802489 | 5.476665e-49 | 2.686131e-46 |
MsG0180000160.01 | MsG0880043298.01 | 0.802225 | 6.205563e-49 | 3.023323e-46 |
MsG0180000184.01 | MsG0880043298.01 | 0.818509 | 1.888782e-52 | 1.416605e-49 |
MsG0180000241.01 | MsG0880043298.01 | 0.821286 | 4.376133e-53 | 3.545146e-50 |
MsG0180000489.01 | MsG0880043298.01 | 0.821945 | 3.082335e-53 | 2.543783e-50 |
MsG0180000599.01 | MsG0880043298.01 | 0.803667 | 3.125298e-49 | 1.579735e-46 |
MsG0180001119.01 | MsG0880043298.01 | 0.802404 | 5.701075e-49 | 2.790377e-46 |
MsG0180001248.01 | MsG0880043298.01 | -0.820066 | 8.347650e-53 | 6.537809e-50 |
MsG0180001610.01 | MsG0880043298.01 | 0.821382 | 4.159686e-53 | 3.378783e-50 |
MsG0180001704.01 | MsG0880043298.01 | 0.849860 | 2.465375e-60 | 4.738616e-57 |
MsG0180001722.01 | MsG0880043298.01 | 0.818335 | 2.068063e-52 | 1.543681e-49 |
MsG0180002024.01 | MsG0880043298.01 | 0.812524 | 4.059932e-51 | 2.587346e-48 |
MsG0180002700.01 | MsG0880043298.01 | 0.835130 | 2.007554e-56 | 2.432144e-53 |
MsG0180004017.01 | MsG0880043298.01 | 0.812801 | 3.531409e-51 | 2.266711e-48 |
MsG0180004025.01 | MsG0880043298.01 | 0.838645 | 2.542352e-57 | 3.427030e-54 |
MsG0180004112.01 | MsG0880043298.01 | 0.807024 | 6.186200e-50 | 3.408725e-47 |
MsG0180004246.01 | MsG0880043298.01 | 0.803114 | 4.068301e-49 | 2.027389e-46 |
MsG0180004516.01 | MsG0880043298.01 | 0.806490 | 8.021312e-50 | 4.359540e-47 |
MsG0180004988.01 | MsG0880043298.01 | 0.811995 | 5.297445e-51 | 3.327991e-48 |
MsG0180005639.01 | MsG0880043298.01 | 0.823295 | 1.496236e-53 | 1.283087e-50 |
MsG0180005729.01 | MsG0880043298.01 | 0.822901 | 1.848600e-53 | 1.567791e-50 |
MsG0180005731.01 | MsG0880043298.01 | 0.830259 | 3.248429e-55 | 3.404880e-52 |
MsG0180006054.01 | MsG0880043298.01 | 0.830557 | 2.745960e-55 | 2.903040e-52 |
MsG0280006370.01 | MsG0880043298.01 | 0.820350 | 7.183768e-53 | 5.670427e-50 |
MsG0780040213.01 | MsG0880043298.01 | 0.857790 | 1.284108e-62 | 3.206498e-59 |
MsG0780040235.01 | MsG0880043298.01 | 0.847873 | 8.780982e-60 | 1.582500e-56 |
MsG0780040278.01 | MsG0880043298.01 | 0.806931 | 6.472844e-50 | 3.558081e-47 |
MsG0780040763.01 | MsG0880043298.01 | 0.829848 | 4.090752e-55 | 4.237929e-52 |
MsG0780041191.01 | MsG0880043298.01 | 0.803515 | 3.360264e-49 | 1.692009e-46 |
MsG0780041262.01 | MsG0880043298.01 | 0.804395 | 2.205503e-49 | 1.135864e-46 |
MsG0780041468.01 | MsG0880043298.01 | 0.843942 | 1.027422e-58 | 1.633259e-55 |
MsG0780041747.01 | MsG0880043298.01 | 0.820109 | 8.159592e-53 | 6.398795e-50 |
MsG0880041852.01 | MsG0880043298.01 | 0.836935 | 6.989953e-57 | 8.941722e-54 |
MsG0880041861.01 | MsG0880043298.01 | 0.830630 | 2.636270e-55 | 2.793108e-52 |
MsG0880041864.01 | MsG0880043298.01 | 0.866296 | 3.163580e-65 | 1.060916e-61 |
MsG0880042022.01 | MsG0880043298.01 | 0.810003 | 1.430547e-50 | 8.525778e-48 |
MsG0880042026.01 | MsG0880043298.01 | 0.800129 | 1.665901e-48 | 7.696240e-46 |
MsG0880042044.01 | MsG0880043298.01 | 0.830103 | 3.546499e-55 | 3.700322e-52 |
MsG0880042086.01 | MsG0880043298.01 | 0.833673 | 4.658909e-56 | 5.402954e-53 |
MsG0880042435.01 | MsG0880043298.01 | -0.812693 | 3.729119e-51 | 2.387046e-48 |
MsG0880043107.01 | MsG0880043298.01 | 0.811988 | 5.315654e-51 | 3.338795e-48 |
MsG0880043298.01 | MsG0880043622.01 | 0.806767 | 7.008913e-50 | 3.836441e-47 |
MsG0880043298.01 | MsG0880044209.01 | 0.809419 | 1.909745e-50 | 1.120758e-47 |
MsG0880043298.01 | MsG0880044487.01 | 0.800414 | 1.457505e-48 | 6.782602e-46 |
MsG0880043298.01 | MsG0880044696.01 | -0.818156 | 2.270091e-52 | 1.686072e-49 |
MsG0880043298.01 | MsG0880044901.01 | -0.809601 | 1.745865e-50 | 1.029559e-47 |
MsG0880043298.01 | MsG0880045402.01 | 0.825698 | 4.067153e-54 | 3.734821e-51 |
MsG0880043298.01 | MsG0880045722.01 | 0.836717 | 7.943376e-57 | 1.009460e-53 |
MsG0880043298.01 | MsG0880045992.01 | 0.837256 | 5.786449e-57 | 7.473653e-54 |
MsG0880043298.01 | MsG0880046200.01 | 0.840808 | 6.954693e-58 | 1.002137e-54 |
MsG0880043298.01 | MsG0880046207.01 | 0.838789 | 2.333323e-57 | 3.158905e-54 |
MsG0880043298.01 | MsG0880046268.01 | 0.800544 | 1.371381e-48 | 6.402672e-46 |
MsG0880043298.01 | MsG0880046334.01 | -0.816192 | 6.278194e-52 | 4.418860e-49 |
MsG0880043298.01 | MsG0880046434.01 | -0.817136 | 3.856378e-52 | 2.785320e-49 |
MsG0880043298.01 | MsG0880046699.01 | 0.881681 | 1.961368e-70 | 1.159986e-66 |
MsG0880043298.01 | MsG0880047394.01 | 0.808273 | 3.358407e-50 | 1.912074e-47 |
MsG0880043298.01 | MsG0880047481.01 | -0.825641 | 4.194978e-54 | 3.845894e-51 |
MsG0880043298.01 | MsG0880047582.01 | -0.800292 | 1.543358e-48 | 7.159967e-46 |
MsG0880043298.01 | MsG0880047657.01 | 0.823949 | 1.051595e-53 | 9.186687e-51 |
MsG0880043298.01 | MsG0880047758.01 | 0.807135 | 5.860896e-50 | 3.238703e-47 |
MsG0280011110.01 | MsG0880043298.01 | -0.810712 | 1.005949e-50 | 6.108398e-48 |
MsG0280011255.01 | MsG0880043298.01 | 0.831840 | 1.328545e-55 | 1.459177e-52 |
MsG0280011272.01 | MsG0880043298.01 | -0.802238 | 6.168635e-49 | 3.006343e-46 |
MsG0280011404.01 | MsG0880043298.01 | 0.861469 | 1.003866e-63 | 2.843601e-60 |
MsG0280011424.01 | MsG0880043298.01 | 0.835963 | 1.235298e-56 | 1.534527e-53 |
MsG0380012005.01 | MsG0880043298.01 | 0.824868 | 6.391373e-54 | 5.732208e-51 |
MsG0380012567.01 | MsG0880043298.01 | 0.853295 | 2.626994e-61 | 5.648713e-58 |
MsG0380013295.01 | MsG0880043298.01 | -0.801534 | 8.606009e-49 | 4.119910e-46 |
MsG0380014287.01 | MsG0880043298.01 | 0.835468 | 1.649005e-56 | 2.018261e-53 |
MsG0680030907.01 | MsG0880043298.01 | 0.853531 | 2.247432e-61 | 4.871229e-58 |
MsG0680031996.01 | MsG0880043298.01 | 0.801849 | 7.414742e-49 | 3.578108e-46 |
MsG0680033862.01 | MsG0880043298.01 | 0.800576 | 1.351045e-48 | 6.312886e-46 |
MsG0680034909.01 | MsG0880043298.01 | -0.823322 | 1.474690e-53 | 1.265529e-50 |
MsG0680035579.01 | MsG0880043298.01 | -0.817499 | 3.194966e-52 | 2.330677e-49 |
MsG0480018525.01 | MsG0880043298.01 | -0.800030 | 1.744815e-48 | 8.040563e-46 |
MsG0480018910.01 | MsG0880043298.01 | 0.811112 | 8.238743e-51 | 5.056213e-48 |
MsG0480019083.01 | MsG0880043298.01 | 0.814060 | 1.866729e-51 | 1.239807e-48 |
MsG0480019313.01 | MsG0880043298.01 | 0.821025 | 5.026460e-53 | 4.043084e-50 |
MsG0480019384.01 | MsG0880043298.01 | 0.868116 | 8.289398e-66 | 2.964325e-62 |
MsG0480020025.01 | MsG0880043298.01 | 0.815830 | 7.561222e-52 | 5.269206e-49 |
MsG0480020322.01 | MsG0880043298.01 | 0.843996 | 9.937370e-59 | 1.582234e-55 |
MsG0480020323.01 | MsG0880043298.01 | 0.829418 | 5.204635e-55 | 5.323877e-52 |
MsG0480021201.01 | MsG0880043298.01 | 0.838294 | 3.131959e-57 | 4.176073e-54 |
MsG0480021248.01 | MsG0880043298.01 | 0.826932 | 2.067309e-54 | 1.966620e-51 |
MsG0480021561.01 | MsG0880043298.01 | 0.834567 | 2.781805e-56 | 3.314221e-53 |
MsG0480021869.01 | MsG0880043298.01 | 0.805326 | 1.408956e-49 | 7.432748e-47 |
MsG0480022488.01 | MsG0880043298.01 | 0.817587 | 3.052091e-52 | 2.231750e-49 |
MsG0480022802.01 | MsG0880043298.01 | 0.848978 | 4.340892e-60 | 8.107747e-57 |
MsG0480023189.01 | MsG0880043298.01 | 0.809132 | 2.200520e-50 | 1.281525e-47 |
MsG0480023190.01 | MsG0880043298.01 | 0.821664 | 3.580088e-53 | 2.931161e-50 |
MsG0480023723.01 | MsG0880043298.01 | 0.843581 | 1.283023e-58 | 2.016625e-55 |
MsG0480023846.01 | MsG0880043298.01 | -0.808072 | 3.706898e-50 | 2.099140e-47 |
MsG0480023877.01 | MsG0880043298.01 | 0.829293 | 5.583194e-55 | 5.691122e-52 |
MsG0580024628.01 | MsG0880043298.01 | 0.800773 | 1.231267e-48 | 5.781908e-46 |
MsG0580024843.01 | MsG0880043298.01 | 0.822026 | 2.952775e-53 | 2.442419e-50 |
MsG0580025055.01 | MsG0880043298.01 | 0.811373 | 7.233604e-51 | 4.469930e-48 |
MsG0580025059.01 | MsG0880043298.01 | 0.803981 | 2.689214e-49 | 1.370457e-46 |
MsG0580025132.01 | MsG0880043298.01 | 0.813912 | 2.012823e-51 | 1.331423e-48 |
MsG0580025226.01 | MsG0880043298.01 | 0.840192 | 1.008202e-57 | 1.425269e-54 |
MsG0580025467.01 | MsG0880043298.01 | 0.816227 | 6.164418e-52 | 4.342961e-49 |
MsG0580025564.01 | MsG0880043298.01 | 0.815394 | 9.455735e-52 | 6.511367e-49 |
MsG0580025612.01 | MsG0880043298.01 | 0.807789 | 4.257304e-50 | 2.393027e-47 |
MsG0580025827.01 | MsG0880043298.01 | 0.885718 | 6.387274e-72 | 4.432128e-68 |
MsG0580025832.01 | MsG0880043298.01 | 0.844757 | 6.202101e-59 | 1.011440e-55 |
MsG0380015486.01 | MsG0880043298.01 | 0.830218 | 3.322892e-55 | 3.478912e-52 |
MsG0380015533.01 | MsG0880043298.01 | 0.809324 | 2.002112e-50 | 1.171946e-47 |
MsG0380015784.01 | MsG0880043298.01 | 0.821073 | 4.900105e-53 | 3.946665e-50 |
MsG0380015847.01 | MsG0880043298.01 | -0.804620 | 1.979844e-49 | 1.025583e-46 |
MsG0380016191.01 | MsG0880043298.01 | -0.820402 | 6.990520e-53 | 5.525998e-50 |
MsG0380016197.01 | MsG0880043298.01 | 0.805693 | 1.180393e-49 | 6.286249e-47 |
MsG0380016540.01 | MsG0880043298.01 | 0.818666 | 1.739696e-52 | 1.310411e-49 |
MsG0380017202.01 | MsG0880043298.01 | 0.831315 | 1.789281e-55 | 1.934596e-52 |
MsG0380017293.01 | MsG0880043298.01 | 0.828062 | 1.107543e-54 | 1.088895e-51 |
MsG0380017329.01 | MsG0880043298.01 | 0.812588 | 3.930741e-51 | 2.509170e-48 |
MsG0380017437.01 | MsG0880043298.01 | -0.830207 | 3.344137e-55 | 3.500049e-52 |
MsG0380017931.01 | MsG0880043298.01 | 0.835383 | 1.732398e-56 | 2.115084e-53 |
MsG0480018426.01 | MsG0880043298.01 | 0.815853 | 7.470451e-52 | 5.209176e-49 |
MsG0580026122.01 | MsG0880043298.01 | 0.813849 | 2.078349e-51 | 1.372432e-48 |
MsG0580026159.01 | MsG0880043298.01 | -0.815807 | 7.648780e-52 | 5.327214e-49 |
MsG0580026498.01 | MsG0880043298.01 | 0.826198 | 3.093975e-54 | 2.881927e-51 |
MsG0580027955.01 | MsG0880043298.01 | 0.822664 | 2.099419e-53 | 1.768574e-50 |
MsG0580028117.01 | MsG0880043298.01 | -0.804599 | 1.999105e-49 | 1.035033e-46 |
MsG0580028232.01 | MsG0880043298.01 | -0.807810 | 4.214463e-50 | 2.370206e-47 |
MsG0580028419.01 | MsG0880043298.01 | 0.828046 | 1.117689e-54 | 1.098356e-51 |
MsG0580028428.01 | MsG0880043298.01 | 0.866650 | 2.441875e-65 | 8.292807e-62 |
MsG0580029001.01 | MsG0880043298.01 | 0.803546 | 3.310126e-49 | 1.668137e-46 |
MsG0580029472.01 | MsG0880043298.01 | 0.800963 | 1.126073e-48 | 5.313947e-46 |
MsG0580030071.01 | MsG0880043298.01 | 0.859162 | 5.004399e-63 | 1.309135e-59 |
MsG0680030514.01 | MsG0880043298.01 | 0.819572 | 1.082366e-52 | 8.360741e-50 |
MsG0680030599.01 | MsG0880043298.01 | 0.872393 | 3.293213e-67 | 1.375786e-63 |
MsG0680030605.01 | MsG0880043298.01 | 0.807430 | 5.075208e-50 | 2.826217e-47 |
MsG0280006711.01 | MsG0880043298.01 | -0.806388 | 8.428661e-50 | 4.568882e-47 |
MsG0280007647.01 | MsG0880043298.01 | 0.865137 | 7.341107e-65 | 2.363082e-61 |
MsG0280007698.01 | MsG0880043298.01 | 0.802291 | 6.015893e-49 | 2.935937e-46 |
MsG0280008165.01 | MsG0880043298.01 | 0.829629 | 4.626428e-55 | 4.761532e-52 |
MsG0280008171.01 | MsG0880043298.01 | 0.820151 | 7.979121e-53 | 6.263989e-50 |
MsG0280008343.01 | MsG0880043298.01 | 0.824420 | 8.149486e-54 | 7.214264e-51 |
MsG0280008660.01 | MsG0880043298.01 | -0.806089 | 9.741616e-50 | 5.240736e-47 |
MsG0280008928.01 | MsG0880043298.01 | 0.830216 | 3.327601e-55 | 3.483612e-52 |
MsG0280008929.01 | MsG0880043298.01 | 0.807360 | 5.250460e-50 | 2.918469e-47 |
MsG0280009699.01 | MsG0880043298.01 | 0.800978 | 1.118461e-48 | 5.279992e-46 |
MsG0680035707.01 | MsG0880043298.01 | 0.811003 | 8.701727e-51 | 5.325568e-48 |
MsG0780035960.01 | MsG0880043298.01 | 0.820421 | 6.920398e-53 | 5.473438e-50 |
MsG0780036116.01 | MsG0880043298.01 | 0.804858 | 1.764974e-49 | 9.200120e-47 |
MsG0780036509.01 | MsG0880043298.01 | 0.827691 | 1.360021e-54 | 1.322594e-51 |
MsG0780036620.01 | MsG0880043298.01 | 0.800210 | 1.603846e-48 | 7.424793e-46 |
MsG0780036792.01 | MsG0880043298.01 | 0.819659 | 1.034130e-52 | 8.007230e-50 |
MsG0780036803.01 | MsG0880043298.01 | 0.822108 | 2.825616e-53 | 2.342794e-50 |
MsG0780037351.01 | MsG0880043298.01 | 0.801628 | 8.233076e-49 | 3.950547e-46 |
MsG0780037363.01 | MsG0880043298.01 | 0.802716 | 4.916846e-49 | 2.425695e-46 |
MsG0780037442.01 | MsG0880043298.01 | 0.830377 | 3.039896e-55 | 3.197158e-52 |
MsG0780038056.01 | MsG0880043298.01 | 0.815788 | 7.724177e-52 | 5.377154e-49 |
MsG0780039161.01 | MsG0880043298.01 | 0.815711 | 8.037728e-52 | 5.583413e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043298.01.T01 | MTR_8g432680 | 94.444 | 72 | 4 | 0 | 1 | 72 | 567 | 638 | 9.59e-43 | 145 |
MsG0880043298.01.T01 | MTR_7g076170 | 77.778 | 72 | 16 | 0 | 1 | 72 | 562 | 633 | 2.49e-32 | 117 |
MsG0880043298.01.T01 | MTR_0019s0120 | 59.722 | 72 | 29 | 0 | 1 | 72 | 563 | 634 | 1.53e-26 | 100 |
MsG0880043298.01.T01 | MTR_1g101370 | 63.077 | 65 | 24 | 0 | 1 | 65 | 554 | 618 | 6.55e-25 | 96.3 |
MsG0880043298.01.T01 | MTR_5g040360 | 65.152 | 66 | 23 | 0 | 1 | 66 | 536 | 601 | 2.18e-24 | 94.7 |
MsG0880043298.01.T01 | MTR_8g100075 | 57.971 | 69 | 29 | 0 | 4 | 72 | 560 | 628 | 1.40e-22 | 89.4 |
MsG0880043298.01.T01 | MTR_8g055840 | 63.492 | 63 | 23 | 0 | 2 | 64 | 538 | 600 | 5.48e-22 | 87.8 |
MsG0880043298.01.T01 | MTR_3g040370 | 63.077 | 65 | 24 | 0 | 2 | 66 | 535 | 599 | 6.09e-22 | 87.8 |
MsG0880043298.01.T01 | MTR_4g098890 | 60.656 | 61 | 24 | 0 | 1 | 61 | 540 | 600 | 4.64e-21 | 85.1 |
MsG0880043298.01.T01 | MTR_8g432620 | 44.444 | 63 | 35 | 0 | 3 | 65 | 539 | 601 | 5.94e-14 | 65.1 |
MsG0880043298.01.T01 | MTR_5g080720 | 45.902 | 61 | 33 | 0 | 1 | 61 | 577 | 637 | 1.29e-12 | 61.2 |
MsG0880043298.01.T01 | MTR_3g068990 | 41.935 | 62 | 36 | 0 | 1 | 62 | 605 | 666 | 2.77e-12 | 60.1 |
MsG0880043298.01.T01 | MTR_7g076150 | 45.161 | 62 | 34 | 0 | 3 | 64 | 383 | 444 | 9.20e-12 | 58.5 |
MsG0880043298.01.T01 | MTR_1g029730 | 46.032 | 63 | 34 | 0 | 1 | 63 | 596 | 658 | 6.06e-11 | 56.2 |
MsG0880043298.01.T01 | MTR_7g076150 | 45.161 | 62 | 34 | 0 | 3 | 64 | 526 | 587 | 6.79e-11 | 56.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043298.01.T01 | AT4G00750 | 69.444 | 72 | 22 | 0 | 1 | 72 | 559 | 630 | 8.43e-30 | 110 |
MsG0880043298.01.T01 | AT2G45750 | 61.972 | 71 | 27 | 0 | 2 | 72 | 553 | 623 | 2.99e-25 | 97.1 |
MsG0880043298.01.T01 | AT1G33170 | 62.121 | 66 | 25 | 0 | 4 | 69 | 574 | 639 | 3.60e-24 | 94.0 |
MsG0880043298.01.T01 | AT4G10440 | 61.765 | 68 | 26 | 0 | 4 | 71 | 556 | 623 | 1.48e-23 | 92.4 |
MsG0880043298.01.T01 | AT1G26850 | 59.155 | 71 | 29 | 0 | 2 | 72 | 546 | 616 | 6.80e-23 | 90.5 |
MsG0880043298.01.T01 | AT1G26850 | 59.155 | 71 | 29 | 0 | 2 | 72 | 546 | 616 | 6.80e-23 | 90.5 |
MsG0880043298.01.T01 | AT4G18030 | 63.636 | 66 | 24 | 0 | 1 | 66 | 540 | 605 | 1.54e-22 | 89.4 |
MsG0880043298.01.T01 | AT2G39750 | 46.774 | 62 | 33 | 0 | 1 | 62 | 629 | 690 | 6.19e-14 | 65.1 |
MsG0880043298.01.T01 | AT4G00740 | 43.077 | 65 | 37 | 0 | 3 | 67 | 532 | 596 | 8.50e-14 | 64.7 |
MsG0880043298.01.T01 | AT4G00740 | 43.077 | 65 | 37 | 0 | 3 | 67 | 532 | 596 | 8.50e-14 | 64.7 |
MsG0880043298.01.T01 | AT5G06050 | 39.683 | 63 | 38 | 0 | 1 | 63 | 601 | 663 | 3.25e-13 | 62.8 |
MsG0880043298.01.T01 | AT1G77260 | 40.323 | 62 | 37 | 0 | 1 | 62 | 593 | 654 | 6.64e-12 | 59.3 |
MsG0880043298.01.T01 | AT2G43200 | 46.429 | 56 | 30 | 0 | 3 | 58 | 550 | 605 | 1.39e-11 | 58.2 |
MsG0880043298.01.T01 | AT2G43200 | 46.429 | 56 | 30 | 0 | 3 | 58 | 550 | 605 | 1.39e-11 | 58.2 |
MsG0880043298.01.T01 | AT1G31850 | 45.312 | 64 | 34 | 1 | 1 | 64 | 534 | 596 | 5.05e-11 | 56.6 |
MsG0880043298.01.T01 | AT1G31850 | 45.312 | 64 | 34 | 1 | 1 | 64 | 534 | 596 | 5.05e-11 | 56.6 |
MsG0880043298.01.T01 | AT1G31850 | 45.312 | 64 | 34 | 1 | 1 | 64 | 534 | 596 | 5.05e-11 | 56.6 |
MsG0880043298.01.T01 | AT1G31850 | 45.312 | 64 | 34 | 1 | 1 | 64 | 534 | 596 | 5.05e-11 | 56.6 |
Find 9 sgRNAs with CRISPR-Local
Find 14 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCAAAATTACACCACCTTT+TGG | 0.268044 | 8:+22181173 | None:intergenic |
TTTGATAAGGTCCTTCTTCA+TGG | 0.322080 | 8:+22181078 | None:intergenic |
TTGTAGCAGTCAAGCAATAC+TGG | 0.370223 | 8:-22181043 | MsG0880043298.01.T01:CDS |
ACATTCTTCTAGAGATGGAC+CGG | 0.518254 | 8:-22181205 | MsG0880043298.01.T01:CDS |
GGAAAACATTCTTCTAGAGA+TGG | 0.550144 | 8:-22181210 | MsG0880043298.01.T01:CDS |
AGAATTAGAGACCATGAAGA+AGG | 0.559942 | 8:-22181089 | MsG0880043298.01.T01:CDS |
GCATTGCAGATGAAATGCAG+TGG | 0.646503 | 8:-22181118 | MsG0880043298.01.T01:CDS |
CATTGCAGATGAAATGCAGT+GGG | 0.662717 | 8:-22181117 | MsG0880043298.01.T01:CDS |
CAATGTAGATGTGTTGACGA+AGG | 0.740038 | 8:-22181147 | MsG0880043298.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTATCTTTTCACTTTGATA+AGG | + | Chr8:22181166-22181185 | None:intergenic | 25.0% |
AGAATTAGAGACCATGAAGA+AGG | - | Chr8:22181139-22181158 | MsG0880043298.01.T01:CDS | 35.0% | |
TTTGATAAGGTCCTTCTTCA+TGG | + | Chr8:22181153-22181172 | None:intergenic | 35.0% | |
! | GGAAAACATTCTTCTAGAGA+TGG | - | Chr8:22181018-22181037 | MsG0880043298.01.T01:CDS | 35.0% |
CATTGCAGATGAAATGCAGT+GGG | - | Chr8:22181111-22181130 | MsG0880043298.01.T01:CDS | 40.0% | |
TTGTAGCAGTCAAGCAATAC+TGG | - | Chr8:22181185-22181204 | MsG0880043298.01.T01:CDS | 40.0% | |
! | ACATTCTTCTAGAGATGGAC+CGG | - | Chr8:22181023-22181042 | MsG0880043298.01.T01:CDS | 40.0% |
! | CAATGTAGATGTGTTGACGA+AGG | - | Chr8:22181081-22181100 | MsG0880043298.01.T01:CDS | 40.0% |
! | CGCAAAATTACACCACCTTT+TGG | + | Chr8:22181058-22181077 | None:intergenic | 40.0% |
GCATTGCAGATGAAATGCAG+TGG | - | Chr8:22181110-22181129 | MsG0880043298.01.T01:CDS | 45.0% | |
! | TAGAGATGGACCGGATTTTG+CGG | - | Chr8:22181032-22181051 | MsG0880043298.01.T01:CDS | 45.0% |
! | CACCTTTTGGCCGCAAAATC+CGG | + | Chr8:22181045-22181064 | None:intergenic | 50.0% |
! | CGGATTTTGCGGCCAAAAGG+TGG | - | Chr8:22181043-22181062 | MsG0880043298.01.T01:CDS | 55.0% |
! | GACCGGATTTTGCGGCCAAA+AGG | - | Chr8:22181040-22181059 | MsG0880043298.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 22181016 | 22181234 | 22181016 | ID=MsG0880043298.01;Name=MsG0880043298.01 |
Chr8 | mRNA | 22181016 | 22181234 | 22181016 | ID=MsG0880043298.01.T01;Parent=MsG0880043298.01;Name=MsG0880043298.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|72 |
Chr8 | exon | 22181016 | 22181234 | 22181016 | ID=MsG0880043298.01.T01:exon:5893;Parent=MsG0880043298.01.T01 |
Chr8 | CDS | 22181016 | 22181234 | 22181016 | ID=MsG0880043298.01.T01:cds;Parent=MsG0880043298.01.T01 |
Gene Sequence |
Protein sequence |