AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040417.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040417.01.T01 MTR_7g490330 79.518 332 61 2 1 332 1 325 0.0 539
MsG0780040417.01.T01 MTR_7g090300 71.351 370 67 2 1 332 1 369 0.0 522
MsG0780040417.01.T01 MTR_7g490350 70.541 370 70 2 1 332 1 369 0.0 520
MsG0780040417.01.T01 MTR_5g091980 77.711 332 65 2 1 332 1 323 0.0 516
MsG0780040417.01.T01 MTR_2g087780 49.716 352 126 5 29 332 47 395 4.58e-109 323
MsG0780040417.01.T01 MTR_4g050190 48.521 338 125 5 41 332 57 391 2.34e-103 309
MsG0780040417.01.T01 MTR_7g090310 42.400 375 161 7 12 331 11 385 5.86e-99 298
MsG0780040417.01.T01 MTR_2g099030 48.457 324 119 4 51 327 79 401 8.54e-99 298
MsG0780040417.01.T01 MTR_7g090320 46.224 331 127 5 52 331 56 386 1.25e-98 297
MsG0780040417.01.T01 MTR_4g112670 42.193 301 153 3 50 330 35 334 1.32e-77 241
MsG0780040417.01.T01 MTR_4g112630 39.412 340 179 6 3 331 2 325 5.68e-74 231
MsG0780040417.01.T01 MTR_4g112650 39.244 344 173 6 3 326 2 329 4.09e-73 229
MsG0780040417.01.T01 MTR_2g058450 42.475 299 152 4 53 332 39 336 1.63e-70 223
MsG0780040417.01.T01 MTR_4g112620 37.370 289 140 3 54 331 42 300 1.16e-55 183
MsG0780040417.01.T01 MTR_2g058410 39.130 230 125 2 115 329 1 230 9.78e-45 153
MsG0780040417.01.T01 MTR_0003s0530 39.560 182 94 1 159 324 2 183 9.64e-39 136
MsG0780040417.01.T01 MTR_8g074270 37.555 229 122 5 54 282 78 285 2.61e-38 140
MsG0780040417.01.T01 MTR_8g074210 36.638 232 126 5 51 282 75 285 1.20e-37 138
MsG0780040417.01.T01 MTR_8g074170 37.662 231 119 8 54 282 78 285 7.61e-37 136
MsG0780040417.01.T01 MTR_2g042370 28.889 315 165 8 55 332 65 357 7.89e-27 108
MsG0780040417.01.T01 MTR_2g042420 26.757 370 210 9 1 332 3 349 2.14e-26 107
MsG0780040417.01.T01 MTR_1g075865 41.509 106 61 1 163 268 7 111 2.18e-24 96.7
MsG0780040417.01.T01 MTR_2g042430 27.653 311 165 8 55 328 77 364 1.14e-23 100
MsG0780040417.01.T01 MTR_4g112840 47.778 90 47 0 192 281 63 152 8.97e-23 93.6
MsG0780040417.01.T01 MTR_8g074320 40.152 132 74 3 109 237 92 221 1.49e-19 86.3
MsG0780040417.01.T01 MTR_2g058430 42.268 97 54 1 106 200 52 148 1.81e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040417.01.T01 AT3G57030 55.376 372 121 3 6 332 3 374 6.59e-145 414
MsG0780040417.01.T01 AT1G08470 49.112 338 122 5 41 332 56 389 1.43e-104 312
MsG0780040417.01.T01 AT5G22020 47.801 341 130 4 37 332 58 395 8.89e-104 310
MsG0780040417.01.T01 AT5G22020 47.801 341 130 4 37 332 58 395 8.89e-104 310
MsG0780040417.01.T01 AT5G22020 47.801 341 130 4 37 332 58 395 8.89e-104 310
MsG0780040417.01.T01 AT2G41290 46.429 336 131 6 45 332 42 376 8.06e-93 281
MsG0780040417.01.T01 AT3G57020 42.857 357 158 6 14 329 15 366 8.54e-91 276
MsG0780040417.01.T01 AT3G57010 42.120 368 168 5 3 329 4 367 1.14e-89 273
MsG0780040417.01.T01 AT3G59530 45.122 328 121 5 49 329 79 394 4.96e-89 273
MsG0780040417.01.T01 AT3G59530 45.122 328 121 5 49 329 79 394 4.96e-89 273
MsG0780040417.01.T01 AT3G59530 45.122 328 121 5 49 329 79 394 4.96e-89 273
MsG0780040417.01.T01 AT2G41300 46.129 310 124 3 60 329 84 390 1.73e-86 266
MsG0780040417.01.T01 AT3G57020 41.457 357 149 6 14 329 15 352 8.43e-84 258
MsG0780040417.01.T01 AT1G74020 42.662 293 151 6 54 332 38 327 1.12e-69 221
MsG0780040417.01.T01 AT1G74010 42.568 296 152 7 51 332 34 325 6.79e-68 216
MsG0780040417.01.T01 AT1G74000 40.476 294 158 6 53 332 39 329 2.84e-64 206
MsG0780040417.01.T01 AT3G51440 34.413 247 142 7 41 286 56 283 7.07e-31 120
MsG0780040417.01.T01 AT3G51430 32.271 251 150 6 37 286 52 283 4.85e-29 115
MsG0780040417.01.T01 AT3G51430 31.325 249 151 6 37 284 52 281 1.67e-28 114
MsG0780040417.01.T01 AT3G51450 32.189 233 138 6 55 286 70 283 3.82e-28 112
MsG0780040417.01.T01 AT3G51420 31.405 242 146 6 41 281 56 278 1.19e-27 111

Find 84 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCACTGATGTTCTTCA+TGG 0.198711 7:+77240866 None:intergenic
GAAATTCAAATGGGCAGTTT+TGG 0.232638 7:-77240968 MsG0780040417.01.T01:CDS
TATATTGGTGTTTATAGTTT+AGG 0.238782 7:-77240798 MsG0780040417.01.T01:CDS
CTCAATGTAGTGGGACCTAC+TGG 0.241265 7:-77241962 MsG0780040417.01.T01:CDS
AATATTCTTGTACTTCTTAG+TGG 0.314755 7:-77241218 MsG0780040417.01.T01:CDS
AGGGAAAATATTAGAAATCT+TGG 0.328667 7:-77240907 MsG0780040417.01.T01:CDS
TTGCTTAAAGCAACACCATT+AGG 0.331103 7:+77241119 None:intergenic
GTATTGACTTTGCCAGCTTT+TGG 0.331769 7:+77241029 None:intergenic
TTGCTGTCTCGAGTTCTAAT+AGG 0.335629 7:-77245817 MsG0780040417.01.T01:intron
GTGGGAGGCCACTAGGACTA+AGG 0.337333 7:-77242033 MsG0780040417.01.T01:CDS
ACTGCAGAATTCTTCGGCTT+TGG 0.342556 7:-77241061 MsG0780040417.01.T01:CDS
TATTAGAAATCTTGGGAGAT+TGG 0.345041 7:-77240899 MsG0780040417.01.T01:CDS
AAACTATAAACACCAATATA+AGG 0.351153 7:+77240801 None:intergenic
CTTCTTAGTGGAGACGCAAC+TGG 0.372850 7:-77241206 MsG0780040417.01.T01:CDS
ACTCTCCGGTCCGACGGCTT+TGG 0.383656 7:+77245934 None:intergenic
AAGAGAGAAATGGAAAACTT+TGG 0.411409 7:-77240842 MsG0780040417.01.T01:CDS
ATTCTTCGGCTTTGGCTTCG+TGG 0.418524 7:-77241053 MsG0780040417.01.T01:CDS
TCAATGTAGTGGGACCTACT+GGG 0.421424 7:-77241961 MsG0780040417.01.T01:CDS
CTTTCACTTCACCAATGACT+TGG 0.432489 7:-77241897 MsG0780040417.01.T01:CDS
CTTATATTGTCGGGAAAACC+TGG 0.434775 7:+77240993 None:intergenic
TGAATTTCTCCTTATATTGT+CGG 0.438415 7:+77240983 None:intergenic
CCTCGAACTGCAGAATTCTT+CGG 0.438961 7:-77241067 MsG0780040417.01.T01:CDS
CCAGAGTTGGAGCATATTTG+TGG 0.445690 7:-77242052 MsG0780040417.01.T01:CDS
GAATTTCTCCTTATATTGTC+GGG 0.456126 7:+77240984 None:intergenic
GGTGTTGCTTTAAGCAAAGA+TGG 0.456261 7:-77241113 MsG0780040417.01.T01:CDS
GAAGTGAATGTCTTGTTAAG+AGG 0.462386 7:-77241152 MsG0780040417.01.T01:CDS
TTCACTGATATCCAAGTCAT+TGG 0.463204 7:+77241886 None:intergenic
TGGCTTCGTGGACCAAAAGC+TGG 0.463403 7:-77241041 MsG0780040417.01.T01:CDS
AGTGAAGTGGAAGAGAGAAA+TGG 0.469053 7:-77240852 MsG0780040417.01.T01:CDS
GGGAAAATATTAGAAATCTT+GGG 0.469300 7:-77240906 MsG0780040417.01.T01:CDS
TATATTGCTGATGCTTACCT+TGG 0.473507 7:-77241986 MsG0780040417.01.T01:CDS
CCATCTGCCACGCCGGTGTA+CGG 0.474956 7:+77245884 None:intergenic
CATATTTGTGGGAGGCCACT+AGG 0.476270 7:-77242040 MsG0780040417.01.T01:CDS
GCATGAGAAGAGTGCTAGAA+AGG 0.478094 7:+77246051 None:intergenic
AATATAAGGAGAAATTCAAA+TGG 0.478511 7:-77240978 MsG0780040417.01.T01:CDS
CCACAAATATGCTCCAACTC+TGG 0.480733 7:+77242052 None:intergenic
CCGAAGAATTCTGCAGTTCG+AGG 0.480808 7:+77241067 None:intergenic
TTTGATCCAGCAATGTGAAC+AGG 0.486477 7:+77245992 None:intergenic
GCTATAAAGCTGAGTGGTGA+AGG 0.488363 7:-77240927 MsG0780040417.01.T01:CDS
CAAGTCATTGGTGAAGTGAA+AGG 0.495058 7:+77241898 None:intergenic
TGCTCCAACTCTGGTGCGAA+CGG 0.496769 7:+77242061 None:intergenic
TCAGTGGAAATGCCTTATAT+TGG 0.502261 7:-77240813 MsG0780040417.01.T01:CDS
AAAACTTTGGATTGCATCAG+TGG 0.505405 7:-77240829 MsG0780040417.01.T01:CDS
CCGTACACCGGCGTGGCAGA+TGG 0.508218 7:-77245884 MsG0780040417.01.T01:CDS
CAATGTAGTGGGACCTACTG+GGG 0.524671 7:-77241960 MsG0780040417.01.T01:CDS
GCGTCCGTTCGCACCAGAGT+TGG 0.525040 7:-77242065 MsG0780040417.01.T01:CDS
AAGTCATTGGTGAAGTGAAA+GGG 0.530724 7:+77241899 None:intergenic
CAGAGTTGGAGCATATTTGT+GGG 0.532278 7:-77242051 MsG0780040417.01.T01:CDS
AGCCACTCAACTAGCAATAG+AGG 0.532824 7:-77241933 MsG0780040417.01.T01:CDS
TGTTCACATTGCTGGATCAA+AGG 0.537126 7:-77245990 MsG0780040417.01.T01:CDS
TACCTTGGCCTCAATGTAGT+GGG 0.537777 7:-77241971 MsG0780040417.01.T01:CDS
GTCCGACGGCTTTGGTGACG+TGG 0.539978 7:+77245942 None:intergenic
AGCCTCTATTGCTAGTTGAG+TGG 0.552647 7:+77241931 None:intergenic
TTCTTAGTGGAGACGCAACT+GGG 0.559170 7:-77241205 MsG0780040417.01.T01:CDS
TTATCAAACCTTAGTCCTAG+TGG 0.561618 7:+77242025 None:intergenic
CAATGTGAACAGGTGAAAAG+AGG 0.562529 7:+77246002 None:intergenic
CGTCACCAAAGCCGTCGGAC+CGG 0.562729 7:-77245939 MsG0780040417.01.T01:CDS
GTCCCACTACATTGAGGCCA+AGG 0.562852 7:+77241969 None:intergenic
CATGGTGAGGGTCCGTACAC+CGG 0.564118 7:-77245896 MsG0780040417.01.T01:CDS
CATGAAGAACATCAGTGAAG+TGG 0.569248 7:-77240865 MsG0780040417.01.T01:CDS
GAAATCTTGGGAGATTGGCA+AGG 0.571629 7:-77240894 MsG0780040417.01.T01:CDS
TTATCGAAAACAAGACTCTC+CGG 0.573402 7:+77245920 None:intergenic
AAGTGGGAGGAGAAGGAACG+TGG 0.575697 7:-77245851 MsG0780040417.01.T01:CDS
ATATAAGGAGAAATTCAAAT+GGG 0.580818 7:-77240977 MsG0780040417.01.T01:CDS
CAAGCACAGTCTATCAGAGA+AGG 0.594605 7:-77241835 MsG0780040417.01.T01:intron
GGGAGGAGAAGGAACGTGGT+TGG 0.595477 7:-77245847 MsG0780040417.01.T01:CDS
TTACCTTGGCCTCAATGTAG+TGG 0.599466 7:-77241972 MsG0780040417.01.T01:CDS
AATGTAGTGGGACCTACTGG+GGG 0.601063 7:-77241959 MsG0780040417.01.T01:CDS
AAATCTTGGGAGATTGGCAA+GGG 0.602246 7:-77240893 MsG0780040417.01.T01:CDS
AATCCGACCATCTGCCACGC+CGG 0.611385 7:+77245877 None:intergenic
CTAGAAAGGTTACTACATAG+AGG 0.615943 7:+77246065 None:intergenic
AACAAGACTCTCCGGTCCGA+CGG 0.620082 7:+77245928 None:intergenic
CAGTAGGTCCCACTACATTG+AGG 0.626504 7:+77241963 None:intergenic
CTATAAAGCTGAGTGGTGAA+GGG 0.627218 7:-77240926 MsG0780040417.01.T01:CDS
CGTGGAGTATCTGAGCAGCA+TGG 0.630959 7:+77245960 None:intergenic
ACACCGGCGTGGCAGATGGT+CGG 0.631629 7:-77245880 MsG0780040417.01.T01:CDS
CAACTAGCAATAGAGGCTGA+AGG 0.636112 7:-77241926 MsG0780040417.01.T01:CDS
TATCATAAACATGAACTCGA+AGG 0.650730 7:-77246092 None:intergenic
CTCCACGTCACCAAAGCCGT+CGG 0.656986 7:-77245944 MsG0780040417.01.T01:CDS
AGTTGGAGCATATTTGTGGG+AGG 0.657804 7:-77242048 MsG0780040417.01.T01:CDS
TTGGATATCAGTGAAGATGA+AGG 0.668380 7:-77241878 MsG0780040417.01.T01:CDS
TGAGGGTCCGTACACCGGCG+TGG 0.683753 7:-77245891 MsG0780040417.01.T01:CDS
GGAGTATCTGAGCAGCATGG+AGG 0.725901 7:+77245963 None:intergenic
TCAGCAGCTATAAAGCTGAG+TGG 0.731970 7:-77240933 MsG0780040417.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAGAAAAAGAAAA+AGG - Chr7:77244465-77244484 MsG0780040417.01.T01:intron 10.0%
!! AAAAAAAAGAAAAAGAAAAA+GGG - Chr7:77244466-77244485 MsG0780040417.01.T01:intron 10.0%
!! AAAAACTAAAATATTATATC+TGG + Chr7:77241510-77241529 None:intergenic 10.0%
!! AAATTTACACATATTTAATA+CGG + Chr7:77244184-77244203 None:intergenic 10.0%
!! ATATGTATAGATATATTTAA+GGG + Chr7:77241450-77241469 None:intergenic 10.0%
!! CATGTATAAATTAAAAAAAT+AGG - Chr7:77244271-77244290 MsG0780040417.01.T01:intron 10.0%
!! TAATATATAAGTAGAAATAT+AGG - Chr7:77244362-77244381 MsG0780040417.01.T01:intron 10.0%
!! TTAAATATATCTATACATAT+GGG - Chr7:77241450-77241469 MsG0780040417.01.T01:intron 10.0%
!!! ATTTAATATATATTTTGTTG+TGG + Chr7:77243222-77243241 None:intergenic 10.0%
!!! ATTTTAACTTATATATTTAC+GGG + Chr7:77244244-77244263 None:intergenic 10.0%
!!! TTCAACATATATATTTTTAA+GGG - Chr7:77245206-77245225 MsG0780040417.01.T01:intron 10.0%
!!! TTTCTTTATTACTATTTTTT+TGG - Chr7:77241125-77241144 MsG0780040417.01.T01:CDS 10.0%
!! AAAAAAAGAAAAAGAAAAAG+GGG - Chr7:77244467-77244486 MsG0780040417.01.T01:intron 15.0%
!! AAAGTAGAATATATTGAATT+GGG - Chr7:77243400-77243419 MsG0780040417.01.T01:intron 15.0%
!! AATAAAATTATACAATGAAC+CGG - Chr7:77244427-77244446 MsG0780040417.01.T01:intron 15.0%
!! CACTAAATAATTACAATTAT+TGG - Chr7:77241833-77241852 MsG0780040417.01.T01:intron 15.0%
!! CATATGTATAGATATATTTA+AGG + Chr7:77241451-77241470 None:intergenic 15.0%
!! CTTAAATATATCTATACATA+TGG - Chr7:77241449-77241468 MsG0780040417.01.T01:intron 15.0%
!! TAAAGTAGAATATATTGAAT+TGG - Chr7:77243399-77243418 MsG0780040417.01.T01:intron 15.0%
!! TTGCAATTTAAAAATTTGAT+GGG + Chr7:77242650-77242669 None:intergenic 15.0%
!! TTTGCAATTTAAAAATTTGA+TGG + Chr7:77242651-77242670 None:intergenic 15.0%
!!! AATTGCTATTTTTTTTTATG+AGG - Chr7:77244669-77244688 MsG0780040417.01.T01:intron 15.0%
!!! AGTTTGCAAATTTTTTAAAT+GGG + Chr7:77242594-77242613 None:intergenic 15.0%
!!! CTTCAACATATATATTTTTA+AGG - Chr7:77245205-77245224 MsG0780040417.01.T01:intron 15.0%
!!! CTTTTCTAAATATTTTTGTT+CGG + Chr7:77242831-77242850 None:intergenic 15.0%
!!! GAAATTTTCTAAATTTAACA+TGG + Chr7:77242502-77242521 None:intergenic 15.0%
!! AAAAAAGAAAAAGAAAAAGG+GGG - Chr7:77244468-77244487 MsG0780040417.01.T01:intron 20.0%
!! AAACTATAAACACCAATATA+AGG + Chr7:77246081-77246100 None:intergenic 20.0%
!! AAATATAAGTATGAGTTAGA+TGG + Chr7:77244737-77244756 None:intergenic 20.0%
!! AATAGAGTTAATTGTAGAAA+AGG + Chr7:77245094-77245113 None:intergenic 20.0%
!! AATATAAGGAGAAATTCAAA+TGG - Chr7:77245901-77245920 MsG0780040417.01.T01:CDS 20.0%
!! ACAAATGATTCAGTTATTAA+GGG - Chr7:77243527-77243546 MsG0780040417.01.T01:intron 20.0%
!! ATATAAGGAGAAATTCAAAT+GGG - Chr7:77245902-77245921 MsG0780040417.01.T01:CDS 20.0%
!! CAAATTAATCATTCAAACAA+TGG + Chr7:77242439-77242458 None:intergenic 20.0%
!! CGAAATTTGAAAATTATAGA+AGG + Chr7:77242561-77242580 None:intergenic 20.0%
!! CTAAAAATTTGTATTTCACA+AGG + Chr7:77245354-77245373 None:intergenic 20.0%
!! CTTAAATTAGTCAATCTAAA+CGG - Chr7:77243686-77243705 MsG0780040417.01.T01:intron 20.0%
!! GAAAATTTCAAGAAATTTGA+GGG + Chr7:77242708-77242727 None:intergenic 20.0%
!! GAAGTAAAGAGTAAAAATAA+AGG + Chr7:77242322-77242341 None:intergenic 20.0%
!! GTACTACTAACAATATATAT+TGG - Chr7:77245288-77245307 MsG0780040417.01.T01:intron 20.0%
!! GTAGAAGTAAAAACTAAAAA+CGG - Chr7:77241328-77241347 MsG0780040417.01.T01:intron 20.0%
!! TACAAAATCCTTCTAATTTA+AGG + Chr7:77245380-77245399 None:intergenic 20.0%
!! TACAAATGATTCAGTTATTA+AGG - Chr7:77243526-77243545 MsG0780040417.01.T01:intron 20.0%
!! TGAAAATTTCAAGAAATTTG+AGG + Chr7:77242709-77242728 None:intergenic 20.0%
!! TGAATAATTAAATGATTGCT+TGG + Chr7:77242043-77242062 None:intergenic 20.0%
!! TGACTAAATATTTGTGAATA+AGG + Chr7:77241914-77241933 None:intergenic 20.0%
!! TGCAATTTAAAAATTTGATG+GGG + Chr7:77242649-77242668 None:intergenic 20.0%
!! TTAAATTAGTCAATCTAAAC+GGG - Chr7:77243687-77243706 MsG0780040417.01.T01:intron 20.0%
!!! AAAGGAATGTAATTTTTTGA+GGG - Chr7:77242392-77242411 MsG0780040417.01.T01:intron 20.0%
!!! ATATTTTTAAGGGTATGATT+GGG - Chr7:77245216-77245235 MsG0780040417.01.T01:intron 20.0%
!!! ATTTTTTGAGGGAATTAAAA+TGG - Chr7:77242403-77242422 MsG0780040417.01.T01:intron 20.0%
!!! CAGTTTGCAAATTTTTTAAA+TGG + Chr7:77242595-77242614 None:intergenic 20.0%
!!! CGCTTTTGATAAATTTATAA+GGG + Chr7:77242619-77242638 None:intergenic 20.0%
!!! TAAAGGAATGTAATTTTTTG+AGG - Chr7:77242391-77242410 MsG0780040417.01.T01:intron 20.0%
!!! TATATTGGTGTTTATAGTTT+AGG - Chr7:77246081-77246100 MsG0780040417.01.T01:CDS 20.0%
!!! TATATTTTTAAGGGTATGAT+TGG - Chr7:77245215-77245234 MsG0780040417.01.T01:intron 20.0%
!!! TCTTTTTATATGGCATATTA+TGG + Chr7:77245593-77245612 None:intergenic 20.0%
!!! TTATTTTTACTCTTTACTTC+AGG - Chr7:77242322-77242341 MsG0780040417.01.T01:intron 20.0%
!!! TTTAGTTCATTTTCAACAAA+TGG + Chr7:77243968-77243987 None:intergenic 20.0%
!!! TTTAGTTTCCTTAAATTAGA+AGG - Chr7:77245369-77245388 MsG0780040417.01.T01:intron 20.0%
! AAAAAAATCTAAGTCAAGTG+AGG - Chr7:77242226-77242245 MsG0780040417.01.T01:intron 25.0%
! AAAAAATCTAAGTCAAGTGA+GGG - Chr7:77242227-77242246 MsG0780040417.01.T01:intron 25.0%
! AAAAAGAAAAAGAAAAAGGG+GGG - Chr7:77244469-77244488 MsG0780040417.01.T01:intron 25.0%
! AAGAAAAGTAAATCTCTCAA+AGG - Chr7:77245407-77245426 MsG0780040417.01.T01:intron 25.0%
! AATATTCTTGTACTTCTTAG+TGG - Chr7:77245661-77245680 MsG0780040417.01.T01:intron 25.0%
! AGGGAAAATATTAGAAATCT+TGG - Chr7:77245972-77245991 MsG0780040417.01.T01:CDS 25.0%
! ATTTCCTTGTGTATATATAG+AGG - Chr7:77241767-77241786 MsG0780040417.01.T01:intron 25.0%
! CAAACACAATCTAAAAGTTA+GGG - Chr7:77242921-77242940 MsG0780040417.01.T01:intron 25.0%
! CATATAAAAAGAATGAGTGA+TGG - Chr7:77245601-77245620 MsG0780040417.01.T01:intron 25.0%
! CTAAGGTTTGATAAGAAAAA+TGG - Chr7:77244863-77244882 MsG0780040417.01.T01:intron 25.0%
! CTTAAAACATACAGAAAGTT+AGG + Chr7:77244557-77244576 None:intergenic 25.0%
! GAAGAAGTAAATGAAAAGAA+TGG + Chr7:77245437-77245456 None:intergenic 25.0%
! GGGAAAATATTAGAAATCTT+GGG - Chr7:77245973-77245992 MsG0780040417.01.T01:CDS 25.0%
! GTATTGAAAAGTAGTGAAAT+GGG - Chr7:77243477-77243496 MsG0780040417.01.T01:intron 25.0%
! GTGAATATTGTCACAAATAT+TGG - Chr7:77241731-77241750 MsG0780040417.01.T01:intron 25.0%
! TACATCATATTGTTCTATGT+GGG - Chr7:77241565-77241584 MsG0780040417.01.T01:intron 25.0%
! TACCTAAAAAAAGAGATATG+AGG - Chr7:77243083-77243102 MsG0780040417.01.T01:intron 25.0%
! TAGGTAATAGTAATACCATT+TGG - Chr7:77241081-77241100 MsG0780040417.01.T01:CDS 25.0%
! TGAATTTCTCCTTATATTGT+CGG + Chr7:77245899-77245918 None:intergenic 25.0%
! TGATGGAATGATTTATATGT+TGG - Chr7:77245618-77245637 MsG0780040417.01.T01:intron 25.0%
! TGTATTGAAAAGTAGTGAAA+TGG - Chr7:77243476-77243495 MsG0780040417.01.T01:intron 25.0%
! TTAACTTATATATTTACGGG+AGG + Chr7:77244241-77244260 None:intergenic 25.0%
! TTATGAGGATATATACAACA+AGG - Chr7:77244684-77244703 MsG0780040417.01.T01:intron 25.0%
! TTGGATTTGAAGATTTATCT+CGG - Chr7:77245307-77245326 MsG0780040417.01.T01:intron 25.0%
! TTTACGAAATATGCATGAAA+AGG - Chr7:77245161-77245180 MsG0780040417.01.T01:intron 25.0%
!! CATCACTCATTCTTTTTATA+TGG + Chr7:77245603-77245622 None:intergenic 25.0%
!! GCGCTTTTGATAAATTTATA+AGG + Chr7:77242620-77242639 None:intergenic 25.0%
!! TAAGTAAGTCTTTTAAGCAT+GGG - Chr7:77241372-77241391 MsG0780040417.01.T01:intron 25.0%
!! TTGAAACCATTTGAAACTAA+AGG + Chr7:77243772-77243791 None:intergenic 25.0%
!! TTTGTTGTAAATACTTGCAA+TGG + Chr7:77243659-77243678 None:intergenic 25.0%
!! TTTTCTTAATCTGTGTGAAA+TGG + Chr7:77243300-77243319 None:intergenic 25.0%
!!! ATGTTTTACAAGCTGTTTTT+AGG + Chr7:77243611-77243630 None:intergenic 25.0%
!!! TAGATGCTAGAATGTTTTAA+AGG - Chr7:77242374-77242393 MsG0780040417.01.T01:intron 25.0%
!!! TTTTAGGTTATTTTCACAAG+CGG + Chr7:77243595-77243614 None:intergenic 25.0%
!!! TTTTTTTTCTTCCATGTACT+AGG + Chr7:77242211-77242230 None:intergenic 25.0%
AAAAAAAGAGATATGAGGCA+TGG - Chr7:77243088-77243107 MsG0780040417.01.T01:intron 30.0%
AAAAGAAAAAGAAAAAGGGG+GGG - Chr7:77244470-77244489 MsG0780040417.01.T01:intron 30.0%
AAACTAAAAACGGTATGACT+TGG - Chr7:77241338-77241357 MsG0780040417.01.T01:intron 30.0%
AAGAACATCTCTCTCTATAT+AGG - Chr7:77244011-77244030 MsG0780040417.01.T01:intron 30.0%
AAGAGAGAAATGGAAAACTT+TGG - Chr7:77246037-77246056 MsG0780040417.01.T01:CDS 30.0%
AAGTTGTTTATCCAAACATC+GGG + Chr7:77243142-77243161 None:intergenic 30.0%
AGAGTTAATTGTAGAAAAGG+AGG + Chr7:77245091-77245110 None:intergenic 30.0%
ATATATCTATACATATGGGC+AGG - Chr7:77241454-77241473 MsG0780040417.01.T01:intron 30.0%
ATCTGGACTCAAAATATTAG+TGG - Chr7:77243832-77243851 MsG0780040417.01.T01:intron 30.0%
ATGATTCAGTTATTAAGGGA+CGG - Chr7:77243531-77243550 MsG0780040417.01.T01:intron 30.0%
ATTTGCAAAAGTAGTCGAAA+AGG - Chr7:77242776-77242795 MsG0780040417.01.T01:intron 30.0%
CAAGTTGTTTATCCAAACAT+CGG + Chr7:77243143-77243162 None:intergenic 30.0%
CATGCATATTTGATATGTTG+GGG - Chr7:77241236-77241255 MsG0780040417.01.T01:intron 30.0%
CCAAACACAATCTAAAAGTT+AGG - Chr7:77242920-77242939 MsG0780040417.01.T01:intron 30.0%
GAATTTCTCCTTATATTGTC+GGG + Chr7:77245898-77245917 None:intergenic 30.0%
GCATGCATATTTGATATGTT+GGG - Chr7:77241235-77241254 MsG0780040417.01.T01:intron 30.0%
GTAAACATACCGAAATTACT+AGG - Chr7:77242974-77242993 MsG0780040417.01.T01:intron 30.0%
GTAACCTCTATATATACACA+AGG + Chr7:77241774-77241793 None:intergenic 30.0%
GTACATCATATTGTTCTATG+TGG - Chr7:77241564-77241583 MsG0780040417.01.T01:intron 30.0%
GTGTATATATAGAGGTTACA+AGG - Chr7:77241775-77241794 MsG0780040417.01.T01:intron 30.0%
TAATTGTAGAAAAGGAGGTA+AGG + Chr7:77245086-77245105 None:intergenic 30.0%
TATATCTATACATATGGGCA+GGG - Chr7:77241455-77241474 MsG0780040417.01.T01:intron 30.0%
TATTAGAAATCTTGGGAGAT+TGG - Chr7:77245980-77245999 MsG0780040417.01.T01:CDS 30.0%
TCTGGACTCAAAATATTAGT+GGG - Chr7:77243833-77243852 MsG0780040417.01.T01:intron 30.0%
TGAAAACTCAAACACAAAAG+TGG + Chr7:77243039-77243058 None:intergenic 30.0%
TGCATGCATATTTGATATGT+TGG - Chr7:77241234-77241253 MsG0780040417.01.T01:intron 30.0%
TTGTAAAAAAATACTGTCCC+AGG + Chr7:77243511-77243530 None:intergenic 30.0%
TTGTGTTTGGATTATGTGAT+TGG + Chr7:77242910-77242929 None:intergenic 30.0%
TTTGCAAAAGTAGTCGAAAA+GGG - Chr7:77242777-77242796 MsG0780040417.01.T01:intron 30.0%
! AAATTCAAATGGGCAGTTTT+GGG - Chr7:77245912-77245931 MsG0780040417.01.T01:CDS 30.0%
! AAGTAAGTCTTTTAAGCATG+GGG - Chr7:77241373-77241392 MsG0780040417.01.T01:intron 30.0%
! CCTAACTTTTAGATTGTGTT+TGG + Chr7:77242923-77242942 None:intergenic 30.0%
! CTAAGTAAGTCTTTTAAGCA+TGG - Chr7:77241371-77241390 MsG0780040417.01.T01:intron 30.0%
!!! AGTCTTGTTTTCGATAAACA+TGG - Chr7:77240965-77240984 MsG0780040417.01.T01:CDS 30.0%
!!! TGCCTCATATCTCTTTTTTT+AGG + Chr7:77243088-77243107 None:intergenic 30.0%
AAAACTTTGGATTGCATCAG+TGG - Chr7:77246050-77246069 MsG0780040417.01.T01:CDS 35.0%
AAACTCAAACACAAAAGTGG+AGG + Chr7:77243036-77243055 None:intergenic 35.0%
AAGCATGGGGTCTTAAAAAT+CGG - Chr7:77241386-77241405 MsG0780040417.01.T01:intron 35.0%
AAGTCATTGGTGAAGTGAAA+GGG + Chr7:77244983-77245002 None:intergenic 35.0%
ACATACCGAAATTACTAGGT+TGG - Chr7:77242978-77242997 MsG0780040417.01.T01:intron 35.0%
AGGAACATTGCGATATACAA+GGG - Chr7:77241666-77241685 MsG0780040417.01.T01:intron 35.0%
AGGTGAATAAGTGAGGAATT+CGG + Chr7:77241706-77241725 None:intergenic 35.0%
ATAAAGACTTACCCGATGTT+TGG - Chr7:77243128-77243147 MsG0780040417.01.T01:intron 35.0%
CAACACTAAATACGAAGAAG+TGG + Chr7:77241288-77241307 None:intergenic 35.0%
CATTTCTTGCTAGTGTCTTT+CGG + Chr7:77242111-77242130 None:intergenic 35.0%
CCTTATTCTACAAGGCAAAA+GGG - Chr7:77243711-77243730 MsG0780040417.01.T01:intron 35.0%
CTAGAAAGGTTACTACATAG+AGG + Chr7:77240817-77240836 None:intergenic 35.0%
CTGGACTCAAAATATTAGTG+GGG - Chr7:77243834-77243853 MsG0780040417.01.T01:intron 35.0%
CTTTGATATGTCCTAGTACA+TGG - Chr7:77242197-77242216 MsG0780040417.01.T01:intron 35.0%
TAAAATATCTCGTCCGCAAT+TGG - Chr7:77241642-77241661 MsG0780040417.01.T01:intron 35.0%
TAGAGTCTGTTCAAGAGTTT+AGG + Chr7:77245491-77245510 None:intergenic 35.0%
TAGGAACATTGCGATATACA+AGG - Chr7:77241665-77241684 MsG0780040417.01.T01:intron 35.0%
TATATTGCTGATGCTTACCT+TGG - Chr7:77244893-77244912 MsG0780040417.01.T01:intron 35.0%
TCAGTGGAAATGCCTTATAT+TGG - Chr7:77246066-77246085 MsG0780040417.01.T01:CDS 35.0%
TCCTCACTTATTCACCTTAA+GGG - Chr7:77241709-77241728 MsG0780040417.01.T01:intron 35.0%
TGAAACGTGAAAACACCAAA+TGG + Chr7:77241099-77241118 None:intergenic 35.0%
TGTGACAATATTCACCCTTA+AGG + Chr7:77241726-77241745 None:intergenic 35.0%
TTATCAAACCTTAGTCCTAG+TGG + Chr7:77244857-77244876 None:intergenic 35.0%
TTATCGAAAACAAGACTCTC+CGG + Chr7:77240962-77240981 None:intergenic 35.0%
TTCACTGATATCCAAGTCAT+TGG + Chr7:77244996-77245015 None:intergenic 35.0%
TTCCTCACTTATTCACCTTA+AGG - Chr7:77241708-77241727 MsG0780040417.01.T01:intron 35.0%
TTGCTTAAAGCAACACCATT+AGG + Chr7:77245763-77245782 None:intergenic 35.0%
TTGGATATCAGTGAAGATGA+AGG - Chr7:77245001-77245020 MsG0780040417.01.T01:intron 35.0%
TTTGTGAATGCAACCAAACA+TGG - Chr7:77243797-77243816 MsG0780040417.01.T01:intron 35.0%
! AATACTTTTGCTGATCTTCC+AGG - Chr7:77245868-77245887 MsG0780040417.01.T01:CDS 35.0%
! CCTTTTGCCTTGTAGAATAA+GGG + Chr7:77243713-77243732 None:intergenic 35.0%
! GAAATTCAAATGGGCAGTTT+TGG - Chr7:77245911-77245930 MsG0780040417.01.T01:CDS 35.0%
! GAAGTGAATGTCTTGTTAAG+AGG - Chr7:77245727-77245746 MsG0780040417.01.T01:intron 35.0%
! GTTTTCGATAAACATGGTGA+GGG - Chr7:77240971-77240990 MsG0780040417.01.T01:CDS 35.0%
! TCTCTGCCTTTAGTTTCAAA+TGG - Chr7:77243763-77243782 MsG0780040417.01.T01:intron 35.0%
! TGTTTTCGATAAACATGGTG+AGG - Chr7:77240970-77240989 MsG0780040417.01.T01:CDS 35.0%
!! GTGTTTGAGTTTTCAATGAC+TGG - Chr7:77243044-77243063 MsG0780040417.01.T01:intron 35.0%
!! TCTACTGACTCAGTTAAACT+GGG + Chr7:77243277-77243296 None:intergenic 35.0%
AAATCTTGGGAGATTGGCAA+GGG - Chr7:77245986-77246005 MsG0780040417.01.T01:CDS 40.0%
AAGAAGTGGTCGTTGAATTG+AGG + Chr7:77241274-77241293 None:intergenic 40.0%
ACATTGCGATATACAAGGGT+CGG - Chr7:77241670-77241689 MsG0780040417.01.T01:intron 40.0%
ACCCTTAAGGTGAATAAGTG+AGG + Chr7:77241713-77241732 None:intergenic 40.0%
AGTCTGTTCAAGAGTTTAGG+AGG + Chr7:77245488-77245507 None:intergenic 40.0%
AGTGAAGTGGAAGAGAGAAA+TGG - Chr7:77246027-77246046 MsG0780040417.01.T01:CDS 40.0%
ATTCAGTTATTAAGGGACGG+AGG - Chr7:77243534-77243553 MsG0780040417.01.T01:intron 40.0%
CAAGTCATTGGTGAAGTGAA+AGG + Chr7:77244984-77245003 None:intergenic 40.0%
CAATGTGAACAGGTGAAAAG+AGG + Chr7:77240880-77240899 None:intergenic 40.0%
CACTTCACTGATGTTCTTCA+TGG + Chr7:77246016-77246035 None:intergenic 40.0%
CAGAGTTGGAGCATATTTGT+GGG - Chr7:77244828-77244847 MsG0780040417.01.T01:intron 40.0%
CATGAAGAACATCAGTGAAG+TGG - Chr7:77246014-77246033 MsG0780040417.01.T01:CDS 40.0%
CATGCAGTTTAACACTTTCG+AGG + Chr7:77241220-77241239 None:intergenic 40.0%
CCACACTGCTGAAAATTTCT+GGG + Chr7:77241486-77241505 None:intergenic 40.0%
CCCTTATTCTACAAGGCAAA+AGG - Chr7:77243710-77243729 MsG0780040417.01.T01:intron 40.0%
CTAGGACATATCAAAGCATG+AGG + Chr7:77242193-77242212 None:intergenic 40.0%
CTATAAAGCTGAGTGGTGAA+GGG - Chr7:77245953-77245972 MsG0780040417.01.T01:CDS 40.0%
CTTATATTGTCGGGAAAACC+TGG + Chr7:77245889-77245908 None:intergenic 40.0%
CTTTCACTTCACCAATGACT+TGG - Chr7:77244982-77245001 MsG0780040417.01.T01:intron 40.0%
GACATATCAAAGCATGAGGA+AGG + Chr7:77242189-77242208 None:intergenic 40.0%
GACGTCCAACCTAGTAATTT+CGG + Chr7:77242986-77243005 None:intergenic 40.0%
GGTGAATAAGTGAGGAATTC+GGG + Chr7:77241705-77241724 None:intergenic 40.0%
GTCTGTTCAAGAGTTTAGGA+GGG + Chr7:77245487-77245506 None:intergenic 40.0%
GTGAATAAGTGAGGAATTCG+GGG + Chr7:77241704-77241723 None:intergenic 40.0%
TAATCAACGACCCATATGCA+GGG + Chr7:77242286-77242305 None:intergenic 40.0%
TCTGTTCAAGAGTTTAGGAG+GGG + Chr7:77245486-77245505 None:intergenic 40.0%
TGAAATGGGTCAAGATTCCT+GGG - Chr7:77243491-77243510 MsG0780040417.01.T01:intron 40.0%
TGCATGATACACGTGCATAT+GGG - Chr7:77244059-77244078 MsG0780040417.01.T01:intron 40.0%
TGTTCACATTGCTGGATCAA+AGG - Chr7:77240889-77240908 MsG0780040417.01.T01:CDS 40.0%
TTAATCAACGACCCATATGC+AGG + Chr7:77242287-77242306 None:intergenic 40.0%
TTCGGTATGTTTACCAGTGT+GGG + Chr7:77242968-77242987 None:intergenic 40.0%
TTGCATGATACACGTGCATA+TGG - Chr7:77244058-77244077 MsG0780040417.01.T01:intron 40.0%
TTTCGGTATGTTTACCAGTG+TGG + Chr7:77242969-77242988 None:intergenic 40.0%
TTTGATCCAGCAATGTGAAC+AGG + Chr7:77240890-77240909 None:intergenic 40.0%
! AAGGGTATGATTGGGAGATA+AGG - Chr7:77245224-77245243 MsG0780040417.01.T01:intron 40.0%
! ACAGGTGAAAAGAGGTTTTG+TGG + Chr7:77240872-77240891 None:intergenic 40.0%
! CAGGTTTTCCCGACAATATA+AGG - Chr7:77245887-77245906 MsG0780040417.01.T01:CDS 40.0%
! CCAGAAATTTTCAGCAGTGT+GGG - Chr7:77241484-77241503 MsG0780040417.01.T01:intron 40.0%
! CCCTTTTGCCTTGTAGAATA+AGG + Chr7:77243714-77243733 None:intergenic 40.0%
! TTGCTGTCTCGAGTTCTAAT+AGG - Chr7:77241062-77241081 MsG0780040417.01.T01:CDS 40.0%
! TTTTCACCTGTTCACATTGC+TGG - Chr7:77240881-77240900 MsG0780040417.01.T01:CDS 40.0%
!! AACGGTATGACTTGGTTTGT+AGG - Chr7:77241346-77241365 MsG0780040417.01.T01:intron 40.0%
!! AGAGGACTTGCTTTTCCTAA+TGG - Chr7:77245745-77245764 MsG0780040417.01.T01:intron 40.0%
!! CAGGTGAAAAGAGGTTTTGT+GGG + Chr7:77240871-77240890 None:intergenic 40.0%
!! GGTGTTGCTTTAAGCAAAGA+TGG - Chr7:77245766-77245785 MsG0780040417.01.T01:intron 40.0%
!! GTCTACTGACTCAGTTAAAC+TGG + Chr7:77243278-77243297 None:intergenic 40.0%
!!! AGATGGTCGGATTTTGAAGT+GGG - Chr7:77241012-77241031 MsG0780040417.01.T01:CDS 40.0%
!!! GTATTGACTTTGCCAGCTTT+TGG + Chr7:77245853-77245872 None:intergenic 40.0%
!!! TGTTGGTCACTTTTGTTTGC+AGG - Chr7:77245635-77245654 MsG0780040417.01.T01:intron 40.0%
AAACGGGCCCTTATTCTACA+AGG - Chr7:77243703-77243722 MsG0780040417.01.T01:intron 45.0%
AAAGTTAGGTCTCCATGCAG+GGG + Chr7:77244543-77244562 None:intergenic 45.0%
ACAAAAGTGGAGGAGCTGTA+GGG + Chr7:77243026-77243045 None:intergenic 45.0%
ACTGCAGAATTCTTCGGCTT+TGG - Chr7:77245818-77245837 MsG0780040417.01.T01:CDS 45.0%
AGAAAGTTAGGTCTCCATGC+AGG + Chr7:77244545-77244564 None:intergenic 45.0%
AGCCACTCAACTAGCAATAG+AGG - Chr7:77244946-77244965 MsG0780040417.01.T01:intron 45.0%
AGCCTCTATTGCTAGTTGAG+TGG + Chr7:77244951-77244970 None:intergenic 45.0%
AGTTGGAGCATATTTGTGGG+AGG - Chr7:77244831-77244850 MsG0780040417.01.T01:intron 45.0%
ATATCTCGTCCGCAATTGGT+AGG - Chr7:77241646-77241665 MsG0780040417.01.T01:intron 45.0%
ATGATACACGTGCATATGGG+CGG - Chr7:77244062-77244081 MsG0780040417.01.T01:intron 45.0%
ATGCAACCAAACATGGAGAC+AGG - Chr7:77243804-77243823 MsG0780040417.01.T01:intron 45.0%
ATTGCGATATACAAGGGTCG+GGG - Chr7:77241672-77241691 MsG0780040417.01.T01:intron 45.0%
CAACTAGCAATAGAGGCTGA+AGG - Chr7:77244953-77244972 MsG0780040417.01.T01:intron 45.0%
CAAGCACAGTCTATCAGAGA+AGG - Chr7:77245044-77245063 MsG0780040417.01.T01:intron 45.0%
CATTGCGATATACAAGGGTC+GGG - Chr7:77241671-77241690 MsG0780040417.01.T01:intron 45.0%
CCACAAATATGCTCCAACTC+TGG + Chr7:77244830-77244849 None:intergenic 45.0%
CCAGAGTTGGAGCATATTTG+TGG - Chr7:77244827-77244846 MsG0780040417.01.T01:intron 45.0%
CCCACACTGCTGAAAATTTC+TGG + Chr7:77241487-77241506 None:intergenic 45.0%
CCTCGAACTGCAGAATTCTT+CGG - Chr7:77245812-77245831 MsG0780040417.01.T01:intron 45.0%
CGCAATGTTCCTACCAATTG+CGG + Chr7:77241658-77241677 None:intergenic 45.0%
CTGACTCAGTTAAACTGGGA+CGG + Chr7:77243273-77243292 None:intergenic 45.0%
GAAAGTTAGGTCTCCATGCA+GGG + Chr7:77244544-77244563 None:intergenic 45.0%
GAAATCTTGGGAGATTGGCA+AGG - Chr7:77245985-77246004 MsG0780040417.01.T01:CDS 45.0%
GCTATAAAGCTGAGTGGTGA+AGG - Chr7:77245952-77245971 MsG0780040417.01.T01:CDS 45.0%
GTGAAATGGGTCAAGATTCC+TGG - Chr7:77243490-77243509 MsG0780040417.01.T01:intron 45.0%
TACCTTGGCCTCAATGTAGT+GGG - Chr7:77244908-77244927 MsG0780040417.01.T01:intron 45.0%
TCAGCAGCTATAAAGCTGAG+TGG - Chr7:77245946-77245965 MsG0780040417.01.T01:CDS 45.0%
TCTATACATATGGGCAGGGA+CGG - Chr7:77241459-77241478 MsG0780040417.01.T01:intron 45.0%
TGCAACCAAACATGGAGACA+GGG - Chr7:77243805-77243824 MsG0780040417.01.T01:intron 45.0%
TTACCTTGGCCTCAATGTAG+TGG - Chr7:77244907-77244926 MsG0780040417.01.T01:intron 45.0%
TTCTTAGTGGAGACGCAACT+GGG - Chr7:77245674-77245693 MsG0780040417.01.T01:intron 45.0%
! CCCAGAAATTTTCAGCAGTG+TGG - Chr7:77241483-77241502 MsG0780040417.01.T01:intron 45.0%
! TCAATGTAGTGGGACCTACT+GGG - Chr7:77244918-77244937 MsG0780040417.01.T01:intron 45.0%
!! CAGATGGTCGGATTTTGAAG+TGG - Chr7:77241011-77241030 MsG0780040417.01.T01:CDS 45.0%
!! GAGGTTTTGTGGGTTGAATG+AGG + Chr7:77240861-77240880 None:intergenic 45.0%
!! GCATGAGAAGAGTGCTAGAA+AGG + Chr7:77240831-77240850 None:intergenic 45.0%
!!! GATTTTGAAGTGGGAGGAGA+AGG - Chr7:77241021-77241040 MsG0780040417.01.T01:CDS 45.0%
!! AAATATATAAGTTAAAATAT+AGG - Chr7:77244246-77244265 MsG0780040417.01.T01:intron 5.0%
!! GTATAAATTAAAAAAAAAAT+CGG - Chr7:77244214-77244233 MsG0780040417.01.T01:intron 5.0%
!! TTTATCTAATAAATATAATA+AGG - Chr7:77241874-77241893 MsG0780040417.01.T01:CDS 5.0%
!!! TATTTTAACTTATATATTTA+CGG + Chr7:77244245-77244264 None:intergenic 5.0%
!!! TTTTTTAAATTTTTTTTTAC+CGG + Chr7:77244449-77244468 None:intergenic 5.0%
ACTCAGTTAAACTGGGACGG+AGG + Chr7:77243270-77243289 None:intergenic 50.0%
AGAGTTTAGGAGGGGAGAGA+AGG + Chr7:77245478-77245497 None:intergenic 50.0%
AGTTTAGGAGGGGAGAGAAG+GGG + Chr7:77245476-77245495 None:intergenic 50.0%
CAAAAGTGGAGGAGCTGTAG+GGG + Chr7:77243025-77243044 None:intergenic 50.0%
CACAAAAGTGGAGGAGCTGT+AGG + Chr7:77243027-77243046 None:intergenic 50.0%
CAGTAGGTCCCACTACATTG+AGG + Chr7:77244919-77244938 None:intergenic 50.0%
CATATTTGTGGGAGGCCACT+AGG - Chr7:77244839-77244858 MsG0780040417.01.T01:intron 50.0%
CCGAAGAATTCTGCAGTTCG+AGG + Chr7:77245815-77245834 None:intergenic 50.0%
CTCAGTTAAACTGGGACGGA+GGG + Chr7:77243269-77243288 None:intergenic 50.0%
CTTCTTAGTGGAGACGCAAC+TGG - Chr7:77245673-77245692 MsG0780040417.01.T01:intron 50.0%
GAGTTTAGGAGGGGAGAGAA+GGG + Chr7:77245477-77245496 None:intergenic 50.0%
GCAACCAAACATGGAGACAG+GGG - Chr7:77243806-77243825 MsG0780040417.01.T01:intron 50.0%
TCTAAGTCAAGTGAGGGCCT+AGG - Chr7:77242233-77242252 MsG0780040417.01.T01:intron 50.0%
TGATACACGTGCATATGGGC+GGG - Chr7:77244063-77244082 MsG0780040417.01.T01:intron 50.0%
! AATGTAGTGGGACCTACTGG+GGG - Chr7:77244920-77244939 MsG0780040417.01.T01:intron 50.0%
! ATTCTTCGGCTTTGGCTTCG+TGG - Chr7:77245826-77245845 MsG0780040417.01.T01:CDS 50.0%
! CAATGTAGTGGGACCTACTG+GGG - Chr7:77244919-77244938 MsG0780040417.01.T01:intron 50.0%
! CCAGTGTGGGCTAAAACTTG+TGG + Chr7:77242955-77242974 None:intergenic 50.0%
! CTCAATGTAGTGGGACCTAC+TGG - Chr7:77244917-77244936 MsG0780040417.01.T01:intron 50.0%
!! CCACAAGTTTTAGCCCACAC+TGG - Chr7:77242952-77242971 MsG0780040417.01.T01:intron 50.0%
!!! TGGTCGGATTTTGAAGTGGG+AGG - Chr7:77241015-77241034 MsG0780040417.01.T01:CDS 50.0%
AAAAAGGGGGGGACCTATGC+TGG - Chr7:77244481-77244500 MsG0780040417.01.T01:intron 55.0%
AACAAGACTCTCCGGTCCGA+CGG + Chr7:77240954-77240973 None:intergenic 55.0%
AAGTGGGAGGAGAAGGAACG+TGG - Chr7:77241028-77241047 MsG0780040417.01.T01:CDS 55.0%
ACCAAACATGGAGACAGGGG+CGG - Chr7:77243809-77243828 MsG0780040417.01.T01:intron 55.0%
CAACGACCCATATGCAGGGA+CGG + Chr7:77242282-77242301 None:intergenic 55.0%
GACCTCTTCAAGGCACAGTG+TGG + Chr7:77244518-77244537 None:intergenic 55.0%
GTCCCACTACATTGAGGCCA+AGG + Chr7:77244913-77244932 None:intergenic 55.0%
TGAGTGGCTAAACCCCCAGT+AGG + Chr7:77244935-77244954 None:intergenic 55.0%
TGCCACACTGTGCCTTGAAG+AGG - Chr7:77244513-77244532 MsG0780040417.01.T01:intron 55.0%
TGCTCCAACTCTGGTGCGAA+CGG + Chr7:77244821-77244840 None:intergenic 55.0%
TGGCTTCGTGGACCAAAAGC+TGG - Chr7:77245838-77245857 MsG0780040417.01.T01:CDS 55.0%
! ACCCACGTTGGTGAGTGTGT+GGG + Chr7:77242259-77242278 None:intergenic 55.0%
! ACTGGGACGGAGGGAGTATA+TGG + Chr7:77243260-77243279 None:intergenic 55.0%
! CGTGGAGTATCTGAGCAGCA+TGG + Chr7:77240922-77240941 None:intergenic 55.0%
! GGAGTATCTGAGCAGCATGG+AGG + Chr7:77240919-77240938 None:intergenic 55.0%
AATCCGACCATCTGCCACGC+CGG + Chr7:77241005-77241024 None:intergenic 60.0%
CATGGTGAGGGTCCGTACAC+CGG - Chr7:77240983-77241002 MsG0780040417.01.T01:CDS 60.0%
CTCCACGTCACCAAAGCCGT+CGG - Chr7:77240935-77240954 MsG0780040417.01.T01:CDS 60.0%
GCCCACACACTCACCAACGT+GGG - Chr7:77242255-77242274 MsG0780040417.01.T01:intron 60.0%
GGCAAGTGCCACACCAGCAT+AGG + Chr7:77244497-77244516 None:intergenic 60.0%
GGGAGGAGAAGGAACGTGGT+TGG - Chr7:77241032-77241051 MsG0780040417.01.T01:CDS 60.0%
GTGGGAGGCCACTAGGACTA+AGG - Chr7:77244846-77244865 MsG0780040417.01.T01:intron 60.0%
GTGGGTCCGTCCCTGCATAT+GGG - Chr7:77242273-77242292 MsG0780040417.01.T01:intron 60.0%
GTTAGGTCTCCATGCAGGGG+CGG + Chr7:77244540-77244559 None:intergenic 60.0%
TCCGCCCCTGTCTCCATGTT+TGG + Chr7:77243813-77243832 None:intergenic 60.0%
! GACCCACGTTGGTGAGTGTG+TGG + Chr7:77242260-77242279 None:intergenic 60.0%
! GTTGGTGAGTGTGTGGGCCT+AGG + Chr7:77242253-77242272 None:intergenic 60.0%
ACACCGGCGTGGCAGATGGT+CGG - Chr7:77240999-77241018 MsG0780040417.01.T01:CDS 65.0%
ACTCTCCGGTCCGACGGCTT+TGG + Chr7:77240948-77240967 None:intergenic 65.0%
ATGCAGGGACGGACCCACGT+TGG + Chr7:77242271-77242290 None:intergenic 65.0%
CATGGAGACAGGGGCGGATC+TGG - Chr7:77243815-77243834 MsG0780040417.01.T01:intron 65.0%
CCATCTGCCACGCCGGTGTA+CGG + Chr7:77240998-77241017 None:intergenic 65.0%
CGTCACCAAAGCCGTCGGAC+CGG - Chr7:77240940-77240959 MsG0780040417.01.T01:CDS 65.0%
CGTGGGTCCGTCCCTGCATA+TGG - Chr7:77242272-77242291 MsG0780040417.01.T01:intron 65.0%
GCGTCCGTTCGCACCAGAGT+TGG - Chr7:77244814-77244833 MsG0780040417.01.T01:intron 65.0%
GGCCCACACACTCACCAACG+TGG - Chr7:77242254-77242273 MsG0780040417.01.T01:intron 65.0%
TGAAGAGGTCCGCCCCTGCA+TGG - Chr7:77244528-77244547 MsG0780040417.01.T01:intron 65.0%
TGCAGGGGCGGACCTCTTCA+AGG + Chr7:77244528-77244547 None:intergenic 65.0%
!! GTCCGACGGCTTTGGTGACG+TGG + Chr7:77240940-77240959 None:intergenic 65.0%
CCGTACACCGGCGTGGCAGA+TGG - Chr7:77240995-77241014 MsG0780040417.01.T01:CDS 70.0%
GGGGGGGACCTATGCTGGTG+TGG - Chr7:77244486-77244505 MsG0780040417.01.T01:intron 70.0%
TGAGGGTCCGTACACCGGCG+TGG - Chr7:77240988-77241007 MsG0780040417.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77240791 77246110 77240791 ID=MsG0780040417.01;Name=MsG0780040417.01
Chr7 mRNA 77240791 77246110 77240791 ID=MsG0780040417.01.T01;Parent=MsG0780040417.01;Name=MsG0780040417.01.T01;_AED=0.45;_eAED=0.45;_QI=6|0.5|0.66|1|1|1|3|0|334
Chr7 exon 77240791 77241244 77240791 ID=MsG0780040417.01.T01:exon:14853;Parent=MsG0780040417.01.T01
Chr7 exon 77241836 77242099 77241836 ID=MsG0780040417.01.T01:exon:14852;Parent=MsG0780040417.01.T01
Chr7 exon 77245818 77246110 77245818 ID=MsG0780040417.01.T01:exon:14851;Parent=MsG0780040417.01.T01
Chr7 five_prime_UTR 77246105 77246110 77246105 ID=MsG0780040417.01.T01:five_prime_utr;Parent=MsG0780040417.01.T01
Chr7 CDS 77245818 77246104 77245818 ID=MsG0780040417.01.T01:cds;Parent=MsG0780040417.01.T01
Chr7 CDS 77241836 77242099 77241836 ID=MsG0780040417.01.T01:cds;Parent=MsG0780040417.01.T01
Chr7 CDS 77240791 77241244 77240791 ID=MsG0780040417.01.T01:cds;Parent=MsG0780040417.01.T01
Gene Sequence

>MsG0780040417.01.T01

ATGAACTCGAAGGACATCCTCTATGTAGTAACCTTTCTAGCACTCTTCTCATGCATCTTCGCCTCATTCAACCCACAAAACCTCTTTTCACCTGTTCACATTGCTGGATCAAAGGACAGCCTCCATGCTGCTCAGATACTCCACGTCACCAAAGCCGTCGGACCGGAGAGTCTTGTTTTCGATAAACATGGTGAGGGTCCGTACACCGGCGTGGCAGATGGTCGGATTTTGAAGTGGGAGGAGAAGGAACGTGGTTGGACTGAATTTGCTGTCTCGAGTTCTAATAGGTCAGATTGTGTGCGTCCGTTCGCACCAGAGTTGGAGCATATTTGTGGGAGGCCACTAGGACTAAGGTTTGATAAGAAAAATGGAGATTTGTATATTGCTGATGCTTACCTTGGCCTCAATGTAGTGGGACCTACTGGGGGTTTAGCCACTCAACTAGCAATAGAGGCTGAAGGACATCCCTTTCACTTCACCAATGACTTGGATATCAGTGAAGATGAAGGTGTTATTTACTTCACTGATTCAAGCACAGTCTATCAGAGAAGGCAAAATATTCTTGTACTTCTTAGTGGAGACGCAACTGGGCGATTAATGAAATATCATAAGTCAACAAAAGAAGTGAATGTCTTGTTAAGAGGACTTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTAGTAGCTGAAACCTCGAACTGCAGAATTCTTCGGCTTTGGCTTCGTGGACCAAAAGCTGGCAAAGTCAATACTTTTGCTGATCTTCCAGGTTTTCCCGACAATATAAGGAGAAATTCAAATGGGCAGTTTTGGGTTGCTTTACATTCAGCAGCTATAAAGCTGAGTGGTGAAGGGAAAATATTAGAAATCTTGGGAGATTGGCAAGGGAAGACCATGAAGAACATCAGTGAAGTGGAAGAGAGAAATGGAAAACTTTGGATTGCATCAGTGGAAATGCCTTATATTGGTGTTTATAGTTTAGGATTATAA

Protein sequence

>MsG0780040417.01.T01

MNSKDILYVVTFLALFSCIFASFNPQNLFSPVHIAGSKDSLHAAQILHVTKAVGPESLVFDKHGEGPYTGVADGRILKWEEKERGWTEFAVSSSNRSDCVRPFAPELEHICGRPLGLRFDKKNGDLYIADAYLGLNVVGPTGGLATQLAIEAEGHPFHFTNDLDISEDEGVIYFTDSSTVYQRRQNILVLLSGDATGRLMKYHKSTKEVNVLLRGLAFPNGVALSKDGSFLLVAETSNCRILRLWLRGPKAGKVNTFADLPGFPDNIRRNSNGQFWVALHSAAIKLSGEGKILEILGDWQGKTMKNISEVEERNGKLWIASVEMPYIGVYSLGL*