Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026144.01.T01 | XP_003613746.1 | 91.932 | 471 | 25 | 3 | 1 | 464 | 1 | 465 | 0 | 864 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026144.01.T01 | Q9SWI1 | 37.081 | 418 | 157 | 21 | 55 | 439 | 76 | 420 | 4.66E-47 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026144.01.T01 | G7KDX6 | 91.932 | 471 | 25 | 3 | 1 | 464 | 1 | 465 | 0.0 | 864 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048505.01 | MsG0580026144.01 | 0.806902 | 6.563358e-50 | 3.605119e-47 |
| MsG0080048801.01 | MsG0580026144.01 | 0.816155 | 6.398119e-52 | 4.498788e-49 |
| MsG0080048845.01 | MsG0580026144.01 | 0.824445 | 8.041096e-54 | 7.123423e-51 |
| MsG0080048969.01 | MsG0580026144.01 | 0.804200 | 2.421145e-49 | 1.240713e-46 |
| MsG0080049130.01 | MsG0580026144.01 | 0.807286 | 5.444921e-50 | 3.020859e-47 |
| MsG0180000131.01 | MsG0580026144.01 | 0.806523 | 7.893066e-50 | 4.293395e-47 |
| MsG0180000646.01 | MsG0580026144.01 | 0.828950 | 6.761407e-55 | 6.821061e-52 |
| MsG0180000647.01 | MsG0580026144.01 | 0.824500 | 7.806054e-54 | 6.926509e-51 |
| MsG0180001170.01 | MsG0580026144.01 | 0.803194 | 3.915374e-49 | 1.955328e-46 |
| MsG0180001371.01 | MsG0580026144.01 | 0.813370 | 2.648727e-51 | 1.726619e-48 |
| MsG0180001685.01 | MsG0580026144.01 | 0.850682 | 1.450328e-60 | 2.863610e-57 |
| MsG0180002902.01 | MsG0580026144.01 | 0.825526 | 4.467931e-54 | 4.082516e-51 |
| MsG0180003146.01 | MsG0580026144.01 | 0.839798 | 1.277203e-57 | 1.783439e-54 |
| MsG0180003198.01 | MsG0580026144.01 | 0.811991 | 5.306192e-51 | 3.333199e-48 |
| MsG0180003451.01 | MsG0580026144.01 | 0.837159 | 6.125764e-57 | 7.889152e-54 |
| MsG0180003730.01 | MsG0580026144.01 | 0.839680 | 1.371042e-57 | 1.907373e-54 |
| MsG0180003906.01 | MsG0580026144.01 | 0.828638 | 8.044649e-55 | 8.042558e-52 |
| MsG0180004106.01 | MsG0580026144.01 | 0.832343 | 9.979503e-56 | 1.112183e-52 |
| MsG0180004542.01 | MsG0580026144.01 | 0.810055 | 1.394309e-50 | 8.320681e-48 |
| MsG0180004987.01 | MsG0580026144.01 | 0.825731 | 3.994951e-54 | 3.671936e-51 |
| MsG0180005039.01 | MsG0580026144.01 | 0.828932 | 6.828519e-55 | 6.885097e-52 |
| MsG0180005568.01 | MsG0580026144.01 | 0.845520 | 3.858356e-59 | 6.446943e-56 |
| MsG0180005803.01 | MsG0580026144.01 | 0.813317 | 2.721233e-51 | 1.771221e-48 |
| MsG0180005821.01 | MsG0580026144.01 | 0.822270 | 2.591051e-53 | 2.158386e-50 |
| MsG0180005969.01 | MsG0580026144.01 | 0.846360 | 2.281445e-59 | 3.916836e-56 |
| MsG0180006168.01 | MsG0580026144.01 | 0.803663 | 3.130703e-49 | 1.582322e-46 |
| MsG0280006349.01 | MsG0580026144.01 | 0.804811 | 1.805344e-49 | 9.399231e-47 |
| MsG0280010611.01 | MsG0580026144.01 | 0.837967 | 3.803310e-57 | 5.021723e-54 |
| MsG0280010675.01 | MsG0580026144.01 | 0.814603 | 1.416407e-51 | 9.546545e-49 |
| MsG0280010974.01 | MsG0580026144.01 | 0.835196 | 1.931053e-56 | 2.344410e-53 |
| MsG0280010975.01 | MsG0580026144.01 | 0.853397 | 2.454535e-61 | 5.296459e-58 |
| MsG0280011252.01 | MsG0580026144.01 | 0.812150 | 4.900461e-51 | 3.091766e-48 |
| MsG0280011270.01 | MsG0580026144.01 | 0.862678 | 4.274711e-64 | 1.262349e-60 |
| MsG0380012270.01 | MsG0580026144.01 | 0.833705 | 4.575093e-56 | 5.310599e-53 |
| MsG0380012821.01 | MsG0580026144.01 | 0.815784 | 7.739906e-52 | 5.387574e-49 |
| MsG0380013177.01 | MsG0580026144.01 | 0.803905 | 2.788912e-49 | 1.418489e-46 |
| MsG0380013499.01 | MsG0580026144.01 | 0.878796 | 2.102004e-69 | 1.112158e-65 |
| MsG0380013687.01 | MsG0580026144.01 | 0.806270 | 8.924116e-50 | 4.823296e-47 |
| MsG0380014386.01 | MsG0580026144.01 | 0.807615 | 4.635726e-50 | 2.593818e-47 |
| MsG0380014552.01 | MsG0580026144.01 | 0.816999 | 4.138739e-52 | 2.978248e-49 |
| MsG0380014560.01 | MsG0580026144.01 | 0.802402 | 5.706059e-49 | 2.792668e-46 |
| MsG0380014794.01 | MsG0580026144.01 | 0.833778 | 4.385568e-56 | 5.102427e-53 |
| MsG0380014909.01 | MsG0580026144.01 | 0.802409 | 5.687267e-49 | 2.783954e-46 |
| MsG0480018983.01 | MsG0580026144.01 | 0.800720 | 1.262367e-48 | 5.920009e-46 |
| MsG0480019693.01 | MsG0580026144.01 | 0.808582 | 2.886104e-50 | 1.656367e-47 |
| MsG0480020229.01 | MsG0580026144.01 | 0.841710 | 4.028992e-58 | 5.969861e-55 |
| MsG0480021060.01 | MsG0580026144.01 | 0.825070 | 5.726024e-54 | 5.165065e-51 |
| MsG0480021367.01 | MsG0580026144.01 | 0.825278 | 5.113647e-54 | 4.640022e-51 |
| MsG0480021420.01 | MsG0580026144.01 | 0.807686 | 4.476605e-50 | 2.509522e-47 |
| MsG0480021892.01 | MsG0580026144.01 | 0.800809 | 1.210610e-48 | 5.690063e-46 |
| MsG0480021893.01 | MsG0580026144.01 | 0.830431 | 2.948886e-55 | 3.106179e-52 |
| MsG0480021894.01 | MsG0580026144.01 | 0.818572 | 1.827257e-52 | 1.372811e-49 |
| MsG0480022138.01 | MsG0580026144.01 | 0.841364 | 4.969973e-58 | 7.286036e-55 |
| MsG0480022150.01 | MsG0580026144.01 | 0.821966 | 3.048101e-53 | 2.517009e-50 |
| MsG0480022537.01 | MsG0580026144.01 | 0.801827 | 7.493115e-49 | 3.613856e-46 |
| MsG0480022804.01 | MsG0580026144.01 | 0.817170 | 3.789566e-52 | 2.739536e-49 |
| MsG0480023166.01 | MsG0580026144.01 | 0.809489 | 1.844938e-50 | 1.084680e-47 |
| MsG0480023371.01 | MsG0580026144.01 | 0.802276 | 6.056897e-49 | 2.954810e-46 |
| MsG0480023505.01 | MsG0580026144.01 | 0.807790 | 4.256335e-50 | 2.392526e-47 |
| MsG0480023578.01 | MsG0580026144.01 | 0.800489 | 1.407288e-48 | 6.561119e-46 |
| MsG0480023656.01 | MsG0580026144.01 | 0.830918 | 2.239674e-55 | 2.393425e-52 |
| MsG0480023845.01 | MsG0580026144.01 | 0.809601 | 1.745264e-50 | 1.029215e-47 |
| MsG0480023890.01 | MsG0580026144.01 | 0.825522 | 4.477250e-54 | 4.090588e-51 |
| MsG0480023896.01 | MsG0580026144.01 | 0.822282 | 2.575233e-53 | 2.145967e-50 |
| MsG0480023989.01 | MsG0580026144.01 | 0.801357 | 9.354149e-49 | 4.458153e-46 |
| MsG0480023998.01 | MsG0580026144.01 | 0.806408 | 8.344833e-50 | 4.525809e-47 |
| MsG0580024192.01 | MsG0580026144.01 | 0.810439 | 1.151903e-50 | 6.943546e-48 |
| MsG0580024665.01 | MsG0580026144.01 | 0.809296 | 2.029567e-50 | 1.187141e-47 |
| MsG0580024717.01 | MsG0580026144.01 | 0.805013 | 1.638246e-49 | 8.573026e-47 |
| MsG0580024759.01 | MsG0580026144.01 | 0.851803 | 6.995116e-61 | 1.432414e-57 |
| MsG0580025377.01 | MsG0580026144.01 | 0.819678 | 1.023809e-52 | 7.931253e-50 |
| MsG0580025505.01 | MsG0580026144.01 | 0.830998 | 2.141272e-55 | 2.293550e-52 |
| MsG0580025589.01 | MsG0580026144.01 | 0.808447 | 3.084038e-50 | 1.763842e-47 |
| MsG0580025845.01 | MsG0580026144.01 | 0.810196 | 1.299712e-50 | 7.784525e-48 |
| MsG0380015501.01 | MsG0580026144.01 | 0.827712 | 1.344492e-54 | 1.308355e-51 |
| MsG0380015545.01 | MsG0580026144.01 | 0.855723 | 5.210149e-62 | 1.214320e-58 |
| MsG0380015645.01 | MsG0580026144.01 | 0.806390 | 8.418615e-50 | 4.563742e-47 |
| MsG0380015693.01 | MsG0580026144.01 | 0.830712 | 2.516133e-55 | 2.672479e-52 |
| MsG0380015817.01 | MsG0580026144.01 | 0.813207 | 2.877128e-51 | 1.866994e-48 |
| MsG0380015896.01 | MsG0580026144.01 | 0.819809 | 9.558835e-53 | 7.432667e-50 |
| MsG0380015897.01 | MsG0580026144.01 | 0.851464 | 8.723474e-61 | 1.767095e-57 |
| MsG0380015898.01 | MsG0580026144.01 | 0.850257 | 1.909209e-60 | 3.717726e-57 |
| MsG0380015921.01 | MsG0580026144.01 | 0.873805 | 1.106348e-67 | 4.864822e-64 |
| MsG0380016074.01 | MsG0580026144.01 | 0.823892 | 1.084412e-53 | 9.458116e-51 |
| MsG0380016459.01 | MsG0580026144.01 | 0.812716 | 3.686341e-51 | 2.361051e-48 |
| MsG0380016762.01 | MsG0580026144.01 | 0.819633 | 1.048116e-52 | 8.109537e-50 |
| MsG0380017056.01 | MsG0580026144.01 | 0.817346 | 3.458586e-52 | 2.512376e-49 |
| MsG0380017336.01 | MsG0580026144.01 | 0.819780 | 9.701479e-53 | 7.537600e-50 |
| MsG0380017423.01 | MsG0580026144.01 | 0.809741 | 1.629114e-50 | 9.642704e-48 |
| MsG0380017542.01 | MsG0580026144.01 | 0.845195 | 4.724601e-59 | 7.812177e-56 |
| MsG0480018089.01 | MsG0580026144.01 | 0.801988 | 6.944624e-49 | 3.362913e-46 |
| MsG0480018232.01 | MsG0580026144.01 | 0.801283 | 9.685419e-49 | 4.607489e-46 |
| MsG0480018323.01 | MsG0580026144.01 | 0.809610 | 1.737614e-50 | 1.024969e-47 |
| MsG0480018324.01 | MsG0580026144.01 | 0.840885 | 6.639733e-58 | 9.590355e-55 |
| MsG0580026144.01 | MsG0580026156.01 | 0.807465 | 4.987329e-50 | 2.779942e-47 |
| MsG0580026144.01 | MsG0580027331.01 | 0.807742 | 4.355584e-50 | 2.445357e-47 |
| MsG0580026144.01 | MsG0580027410.01 | 0.866204 | 3.381769e-65 | 1.130317e-61 |
| MsG0580026144.01 | MsG0580028101.01 | 0.804246 | 2.368414e-49 | 1.215084e-46 |
| MsG0580026144.01 | MsG0580028310.01 | 0.800901 | 1.159491e-48 | 5.463019e-46 |
| MsG0580026144.01 | MsG0580028353.01 | 0.805397 | 1.361463e-49 | 7.195224e-47 |
| MsG0580026144.01 | MsG0580028552.01 | 0.803278 | 3.762210e-49 | 1.882814e-46 |
| MsG0580026144.01 | MsG0580028719.01 | 0.833690 | 4.613030e-56 | 5.352423e-53 |
| MsG0580026144.01 | MsG0580028925.01 | 0.814048 | 1.878985e-51 | 1.247492e-48 |
| MsG0580026144.01 | MsG0580029394.01 | 0.812449 | 4.215135e-51 | 2.681072e-48 |
| MsG0580026144.01 | MsG0580029396.01 | 0.813680 | 2.264589e-51 | 1.488615e-48 |
| MsG0580026144.01 | MsG0580029399.01 | 0.827477 | 1.531397e-54 | 1.480127e-51 |
| MsG0580026144.01 | MsG0580029414.01 | 0.835648 | 1.484789e-56 | 1.827062e-53 |
| MsG0580026144.01 | MsG0680030680.01 | 0.835442 | 1.673932e-56 | 2.047229e-53 |
| MsG0580026144.01 | MsG0680030767.01 | 0.818693 | 1.715475e-52 | 1.293127e-49 |
| MsG0580026144.01 | MsG0680032000.01 | 0.809513 | 1.823594e-50 | 1.072802e-47 |
| MsG0580026144.01 | MsG0680032002.01 | 0.803868 | 2.838856e-49 | 1.442528e-46 |
| MsG0580026144.01 | MsG0680032520.01 | 0.820133 | 8.056528e-53 | 6.321742e-50 |
| MsG0580026144.01 | MsG0680032559.01 | 0.815495 | 8.979765e-52 | 6.201030e-49 |
| MsG0580026144.01 | MsG0680032954.01 | 0.810466 | 1.136564e-50 | 6.856229e-48 |
| MsG0580026144.01 | MsG0680033049.01 | 0.804916 | 1.716638e-49 | 8.961716e-47 |
| MsG0580026144.01 | MsG0680035308.01 | 0.802206 | 6.262797e-49 | 3.049608e-46 |
| MsG0580026144.01 | MsG0680035322.01 | 0.807340 | 5.302537e-50 | 2.945944e-47 |
| MsG0580026144.01 | MsG0780036509.01 | 0.803237 | 3.836257e-49 | 1.917855e-46 |
| MsG0580026144.01 | MsG0780037984.01 | 0.800966 | 1.124492e-48 | 5.306840e-46 |
| MsG0580026144.01 | MsG0780038115.01 | 0.832137 | 1.122310e-55 | 1.243217e-52 |
| MsG0580026144.01 | MsG0780038334.01 | 0.840025 | 1.114722e-57 | 1.567850e-54 |
| MsG0580026144.01 | MsG0780038337.01 | 0.809386 | 1.941278e-50 | 1.138250e-47 |
| MsG0580026144.01 | MsG0780039186.01 | 0.834984 | 2.184089e-56 | 2.634808e-53 |
| MsG0580026144.01 | MsG0780039233.01 | 0.828471 | 8.826691e-55 | 8.781873e-52 |
| MsG0580026144.01 | MsG0780039339.01 | 0.828439 | 8.983936e-55 | 8.930412e-52 |
| MsG0580026144.01 | MsG0780039508.01 | 0.801441 | 8.990010e-49 | 4.293660e-46 |
| MsG0580026144.01 | MsG0780039975.01 | 0.835245 | 1.877086e-56 | 2.282364e-53 |
| MsG0580026144.01 | MsG0780040080.01 | 0.832070 | 1.165775e-55 | 1.288939e-52 |
| MsG0580026144.01 | MsG0780040278.01 | 0.813052 | 3.111154e-51 | 2.010431e-48 |
| MsG0580026144.01 | MsG0780040319.01 | 0.803070 | 4.154640e-49 | 2.068037e-46 |
| MsG0580026144.01 | MsG0780040343.01 | 0.802561 | 5.291807e-49 | 2.600244e-46 |
| MsG0580026144.01 | MsG0780040417.01 | 0.841697 | 4.060971e-58 | 6.014767e-55 |
| MsG0580026144.01 | MsG0780040484.01 | 0.808165 | 3.540875e-50 | 2.010202e-47 |
| MsG0580026144.01 | MsG0780041004.01 | 0.803573 | 3.268388e-49 | 1.648267e-46 |
| MsG0580026144.01 | MsG0780041092.01 | 0.802134 | 6.480297e-49 | 3.149848e-46 |
| MsG0580026144.01 | MsG0780041256.01 | 0.804956 | 1.684379e-49 | 8.802032e-47 |
| MsG0580026144.01 | MsG0780041262.01 | 0.828856 | 7.123260e-55 | 7.166083e-52 |
| MsG0580026144.01 | MsG0780041640.01 | 0.804645 | 1.955423e-49 | 1.013626e-46 |
| MsG0580026144.01 | MsG0780041778.01 | 0.800088 | 1.698353e-48 | 7.837992e-46 |
| MsG0580026144.01 | MsG0880042006.01 | 0.811862 | 5.661775e-51 | 3.544138e-48 |
| MsG0580026144.01 | MsG0880042021.01 | 0.810940 | 8.979242e-51 | 5.486027e-48 |
| MsG0580026144.01 | MsG0880042343.01 | 0.842009 | 3.359421e-58 | 5.025004e-55 |
| MsG0580026144.01 | MsG0880042555.01 | 0.818399 | 2.000558e-52 | 1.495993e-49 |
| MsG0580026144.01 | MsG0880042690.01 | 0.800820 | 1.204653e-48 | 5.663691e-46 |
| MsG0580026144.01 | MsG0880043009.01 | 0.809433 | 1.896517e-50 | 1.113372e-47 |
| MsG0580026144.01 | MsG0880043249.01 | 0.805675 | 1.190615e-49 | 6.337503e-47 |
| MsG0580026144.01 | MsG0880043250.01 | 0.807904 | 4.024108e-50 | 2.268595e-47 |
| MsG0580026144.01 | MsG0880043913.01 | 0.810786 | 9.695852e-51 | 5.899174e-48 |
| MsG0580026144.01 | MsG0880044043.01 | 0.813342 | 2.686994e-51 | 1.750154e-48 |
| MsG0580026144.01 | MsG0880044538.01 | 0.843254 | 1.569250e-58 | 2.440988e-55 |
| MsG0580026144.01 | MsG0880044558.01 | 0.852582 | 4.199840e-61 | 8.815508e-58 |
| MsG0580026144.01 | MsG0880044884.01 | 0.834406 | 3.053366e-56 | 3.620195e-53 |
| MsG0580026144.01 | MsG0880045150.01 | 0.817781 | 2.760315e-52 | 2.029219e-49 |
| MsG0580026144.01 | MsG0880045261.01 | 0.828467 | 8.845454e-55 | 8.799729e-52 |
| MsG0580026144.01 | MsG0880045283.01 | 0.829316 | 5.510740e-55 | 5.621129e-52 |
| MsG0580026144.01 | MsG0880045668.01 | 0.842045 | 3.287025e-58 | 4.922233e-55 |
| MsG0580026144.01 | MsG0880046024.01 | 0.837878 | 4.008386e-57 | 5.278063e-54 |
| MsG0580026144.01 | MsG0880046025.01 | 0.856307 | 3.514685e-62 | 8.351438e-59 |
| MsG0580026144.01 | MsG0880046288.01 | 0.820001 | 8.639205e-53 | 6.753533e-50 |
| MsG0580026144.01 | MsG0880046406.01 | 0.817255 | 3.625537e-52 | 2.627013e-49 |
| MsG0580026144.01 | MsG0880046456.01 | 0.813705 | 2.236189e-51 | 1.470955e-48 |
| MsG0580026144.01 | MsG0880047156.01 | 0.816098 | 6.589512e-52 | 4.626173e-49 |
| MsG0580026144.01 | MsG0880047157.01 | 0.811353 | 7.303340e-51 | 4.510465e-48 |
| MsG0580026144.01 | MsG0880047160.01 | 0.825139 | 5.516472e-54 | 4.985933e-51 |
| MsG0580026144.01 | MsG0880047161.01 | 0.819905 | 9.086290e-53 | 7.084061e-50 |
| MsG0580026144.01 | MsG0880047234.01 | 0.800132 | 1.663243e-48 | 7.684705e-46 |
| MsG0580026144.01 | MsG0880047605.01 | 0.816020 | 6.858017e-52 | 4.804412e-49 |
| MsG0580026144.01 | MsG0880047670.01 | 0.809153 | 2.177561e-50 | 1.268872e-47 |
| MsG0580026144.01 | MsG0880047770.01 | 0.812389 | 4.346254e-51 | 2.759844e-48 |
| MsG0280006587.01 | MsG0580026144.01 | 0.806765 | 7.017201e-50 | 3.840711e-47 |
| MsG0280006848.01 | MsG0580026144.01 | 0.813990 | 1.934749e-51 | 1.282485e-48 |
| MsG0280007047.01 | MsG0580026144.01 | 0.800639 | 1.311494e-48 | 6.137897e-46 |
| MsG0280007075.01 | MsG0580026144.01 | 0.802218 | 6.226043e-49 | 3.032743e-46 |
| MsG0280007517.01 | MsG0580026144.01 | 0.828858 | 7.114496e-55 | 7.157637e-52 |
| MsG0280007518.01 | MsG0580026144.01 | 0.819346 | 1.218694e-52 | 9.353177e-50 |
| MsG0280007522.01 | MsG0580026144.01 | 0.803990 | 2.677874e-49 | 1.364991e-46 |
| MsG0280007600.01 | MsG0580026144.01 | 0.801843 | 7.434879e-49 | 3.587339e-46 |
| MsG0280007628.01 | MsG0580026144.01 | 0.815400 | 9.427200e-52 | 6.492749e-49 |
| MsG0280007754.01 | MsG0580026144.01 | 0.826931 | 2.069392e-54 | 1.968497e-51 |
| MsG0280007755.01 | MsG0580026144.01 | 0.831690 | 1.446983e-55 | 1.582074e-52 |
| MsG0280008233.01 | MsG0580026144.01 | 0.820950 | 5.231740e-53 | 4.199280e-50 |
| MsG0280008588.01 | MsG0580026144.01 | 0.801426 | 9.055042e-49 | 4.323022e-46 |
| MsG0280008709.01 | MsG0580026144.01 | 0.803327 | 3.675846e-49 | 1.841856e-46 |
| MsG0280008939.01 | MsG0580026144.01 | 0.851175 | 1.052834e-60 | 2.112921e-57 |
| MsG0280008966.01 | MsG0580026144.01 | 0.836639 | 8.316517e-57 | 1.054282e-53 |
| MsG0280009171.01 | MsG0580026144.01 | 0.800927 | 1.145209e-48 | 5.399190e-46 |
| MsG0280009953.01 | MsG0580026144.01 | 0.801412 | 9.116735e-49 | 4.350895e-46 |
| MsG0280009960.01 | MsG0580026144.01 | 0.823541 | 1.310616e-53 | 1.131710e-50 |
| MsG0280010198.01 | MsG0580026144.01 | 0.809486 | 1.848210e-50 | 1.086477e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026144.01.T01 | MTR_5g040340 | 91.932 | 471 | 25 | 3 | 1 | 464 | 1 | 465 | 0.0 | 864 |
| MsG0580026144.01.T01 | MTR_8g055860 | 47.036 | 506 | 167 | 24 | 17 | 464 | 29 | 491 | 5.13e-103 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026144.01.T01 | AT2G02950 | 37.081 | 418 | 157 | 21 | 55 | 439 | 76 | 420 | 4.75e-48 | 171 |
| MsG0580026144.01.T01 | AT1G14280 | 34.353 | 425 | 167 | 23 | 52 | 435 | 63 | 416 | 5.28e-45 | 163 |
Find 70 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCATCTCTTTATTGATTT+TGG | 0.002063 | 5:+31329724 | None:intergenic |
| AAAGAAGAAGATGGAGAAAT+TGG | 0.158218 | 5:-31330700 | MsG0580026144.01.T01:CDS |
| GAATTAAACGATGTTCTTAT+TGG | 0.158853 | 5:+31329761 | None:intergenic |
| GCCTCAGATGACAAGGTTTA+AGG | 0.196735 | 5:-31329591 | MsG0580026144.01.T01:CDS |
| TTCCTTTCTATTGCTGATAA+AGG | 0.219072 | 5:+31330744 | None:intergenic |
| TGCACTTTCTATTCTCTTGT+TGG | 0.253513 | 5:+31330584 | None:intergenic |
| TTGCATCTTTCATCTAATAT+TGG | 0.258454 | 5:+31330145 | None:intergenic |
| ACATCTAAGGTAGCAATTCT+TGG | 0.295124 | 5:+31330631 | None:intergenic |
| TCCTTTCTATTGCTGATAAA+GGG | 0.308318 | 5:+31330745 | None:intergenic |
| CTTGAGTTTATTGACATCTA+AGG | 0.320092 | 5:+31330618 | None:intergenic |
| CAGAAAGCTGTTGGTGTTGC+TGG | 0.351018 | 5:-31329665 | MsG0580026144.01.T01:CDS |
| AGGTTTAAGGTGGAAAGTTT+TGG | 0.354957 | 5:-31329578 | MsG0580026144.01.T01:CDS |
| AGGAAAACATTGGAAGTGTT+TGG | 0.359214 | 5:-31330172 | MsG0580026144.01.T01:CDS |
| AGAAAGTGCAAAGTTCAATA+TGG | 0.368278 | 5:-31330571 | MsG0580026144.01.T01:CDS |
| TCAACATCACATGTTGCTTC+TGG | 0.368292 | 5:-31329914 | MsG0580026144.01.T01:CDS |
| CATTCAATGCTTGCTTCACT+TGG | 0.371898 | 5:+31329866 | None:intergenic |
| AGAAATGAACAACATGGTTA+TGG | 0.378020 | 5:-31329551 | MsG0580026144.01.T01:CDS |
| GTTATGGAAAACCTCCTCTT+AGG | 0.383306 | 5:-31329535 | MsG0580026144.01.T01:CDS |
| AAGAGTCTTCTTGCTACTCT+TGG | 0.400812 | 5:-31330439 | MsG0580026144.01.T01:CDS |
| AGTCAATAAGCTTTGATATG+AGG | 0.407049 | 5:-31330123 | MsG0580026144.01.T01:CDS |
| TTCAACAAAAGTGCAGTTCA+TGG | 0.420124 | 5:-31330352 | MsG0580026144.01.T01:CDS |
| TGAGGCTTAAAATACCATCT+TGG | 0.433293 | 5:-31330105 | MsG0580026144.01.T01:CDS |
| GAGGCTTAAAATACCATCTT+GGG | 0.434991 | 5:-31330104 | MsG0580026144.01.T01:CDS |
| CTTGATTCTGAGCCAACACT+TGG | 0.447581 | 5:+31330544 | None:intergenic |
| CGGCGTCATGGAAAATTGTT+GGG | 0.449202 | 5:-31329698 | MsG0580026144.01.T01:CDS |
| CTTCTTCTTTCTTTACTCCA+AGG | 0.457657 | 5:+31330713 | None:intergenic |
| GCGGCGTCATGGAAAATTGT+TGG | 0.460904 | 5:-31329699 | MsG0580026144.01.T01:CDS |
| AAGGTTCAGTAGTAACTATA+AGG | 0.462753 | 5:-31329787 | MsG0580026144.01.T01:CDS |
| TTTGAGATTGAAAGCTTGAC+TGG | 0.473135 | 5:-31329968 | MsG0580026144.01.T01:CDS |
| GAAGACTCTTTCTATGAACT+TGG | 0.474532 | 5:+31330452 | None:intergenic |
| TTCGAAGCAGCTTCCCAAGA+TGG | 0.484347 | 5:+31330091 | None:intergenic |
| CTTGAACAACAAGGAAGTAA+AGG | 0.492569 | 5:-31330791 | MsG0580026144.01.T01:CDS |
| TTCCGCTGCAGCACGAGTCT+CGG | 0.494266 | 5:+31330258 | None:intergenic |
| GTTTCAGATCATGAAGATCA+AGG | 0.495758 | 5:-31329806 | MsG0580026144.01.T01:CDS |
| CCCCTTTATCAGCAATAGAA+AGG | 0.507913 | 5:-31330746 | MsG0580026144.01.T01:CDS |
| CAAGTGAAGCAAGCATTGAA+TGG | 0.508457 | 5:-31329865 | MsG0580026144.01.T01:CDS |
| GGGTGGATTGAATCAGCAAA+AGG | 0.523505 | 5:+31330766 | None:intergenic |
| TTCTATTGCTGATAAAGGGG+TGG | 0.524721 | 5:+31330749 | None:intergenic |
| ACATCGTTTAATTCATCGAA+TGG | 0.528036 | 5:-31329752 | MsG0580026144.01.T01:CDS |
| TTCTTTACTCCAAGGTGAAG+AGG | 0.529025 | 5:+31330721 | None:intergenic |
| CCTTTCTATTGCTGATAAAG+GGG | 0.530407 | 5:+31330746 | None:intergenic |
| GGAGTAAAGAAAGAAGAAGA+TGG | 0.538350 | 5:-31330709 | MsG0580026144.01.T01:CDS |
| ACCTTAAACCTTGTCATCTG+AGG | 0.538940 | 5:+31329590 | None:intergenic |
| GAGATGCCGAGGCGGCGTCA+TGG | 0.540133 | 5:-31329710 | MsG0580026144.01.T01:CDS |
| AACCGAGACTCGTGCTGCAG+CGG | 0.552008 | 5:-31330260 | MsG0580026144.01.T01:CDS |
| AGATAATCCAAGGAAAACAT+TGG | 0.565125 | 5:-31330182 | MsG0580026144.01.T01:CDS |
| GGTGAATTTGATCTCCTAAG+AGG | 0.568136 | 5:+31329521 | None:intergenic |
| GTTATTCTGAGAGGTGAAAG+TGG | 0.569101 | 5:+31330849 | None:intergenic |
| CAGTTTGTAAAAGTGCACTT+TGG | 0.569109 | 5:+31330512 | None:intergenic |
| TTCAACAAGTAGATAATCCA+AGG | 0.572162 | 5:-31330192 | MsG0580026144.01.T01:CDS |
| TGTAATAGTCAGAAAGCTGT+TGG | 0.572244 | 5:-31329674 | MsG0580026144.01.T01:CDS |
| GTTATTGTTGTTATTCTGAG+AGG | 0.577463 | 5:+31330840 | None:intergenic |
| CAATATGGAACTCCAAGTGT+TGG | 0.581850 | 5:-31330556 | MsG0580026144.01.T01:CDS |
| AGAAAGGAACCTCTTCACCT+TGG | 0.586793 | 5:-31330730 | MsG0580026144.01.T01:CDS |
| GAATTTGATCTCCTAAGAGG+AGG | 0.592977 | 5:+31329524 | None:intergenic |
| CTCTTCATACTTGAACAACA+AGG | 0.600465 | 5:-31330800 | MsG0580026144.01.T01:CDS |
| AAATGTTGCCTCAGATGACA+AGG | 0.605171 | 5:-31329598 | MsG0580026144.01.T01:CDS |
| TCAATAAAGAGATGCCGAGG+CGG | 0.619222 | 5:-31329718 | MsG0580026144.01.T01:CDS |
| TCAGATGACAAGGTTTAAGG+TGG | 0.630245 | 5:-31329588 | MsG0580026144.01.T01:CDS |
| GGTGCAAGAAATGAACAACA+TGG | 0.655080 | 5:-31329557 | MsG0580026144.01.T01:CDS |
| AAATCAATAAAGAGATGCCG+AGG | 0.660495 | 5:-31329721 | MsG0580026144.01.T01:CDS |
| AACAACAATAACCTCCGTGG+TGG | 0.687252 | 5:-31330829 | MsG0580026144.01.T01:CDS |
| GTTGATGTAAGTGATCATGC+AGG | 0.688347 | 5:-31330385 | MsG0580026144.01.T01:CDS |
| AGGAGATCAAATTCACCACA+TGG | 0.692006 | 5:-31329515 | MsG0580026144.01.T01:CDS |
| AGCAAGCATTGAATGGAGTG+TGG | 0.726329 | 5:-31329858 | MsG0580026144.01.T01:CDS |
| ATGAAGAGAAAGAACCACCA+CGG | 0.734637 | 5:+31330815 | None:intergenic |
| TACAAAAGTTGTGCACCATG+TGG | 0.736641 | 5:+31329500 | None:intergenic |
| AATAACAACAATAACCTCCG+TGG | 0.749739 | 5:-31330832 | MsG0580026144.01.T01:CDS |
| AGTGGTTGCTGAGATAACCA+TGG | 0.758373 | 5:+31330867 | None:intergenic |
| AAGAGAAAGAACCACCACGG+AGG | 0.793634 | 5:+31330818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAATTAAACGATGTTCTTAT+TGG | + | Chr5:31330600-31330619 | None:intergenic | 25.0% |
| ! | TGTTCTTGATAAAAATGAGT+TGG | + | Chr5:31330424-31330443 | None:intergenic | 25.0% |
| ! | TTGCATCTTTCATCTAATAT+TGG | + | Chr5:31330216-31330235 | None:intergenic | 25.0% |
| AAAGAAGAAGATGGAGAAAT+TGG | - | Chr5:31329658-31329677 | MsG0580026144.01.T01:CDS | 30.0% | |
| AAGGTTCAGTAGTAACTATA+AGG | - | Chr5:31330571-31330590 | MsG0580026144.01.T01:CDS | 30.0% | |
| ACATCGTTTAATTCATCGAA+TGG | - | Chr5:31330606-31330625 | MsG0580026144.01.T01:CDS | 30.0% | |
| AGAAATGAACAACATGGTTA+TGG | - | Chr5:31330807-31330826 | MsG0580026144.01.T01:CDS | 30.0% | |
| AGATAATCCAAGGAAAACAT+TGG | - | Chr5:31330176-31330195 | MsG0580026144.01.T01:CDS | 30.0% | |
| CTTGAGTTTATTGACATCTA+AGG | + | Chr5:31329743-31329762 | None:intergenic | 30.0% | |
| GATGCTGAAAAATACTTCAA+TGG | - | Chr5:31329688-31329707 | MsG0580026144.01.T01:CDS | 30.0% | |
| TCCTTTCTATTGCTGATAAA+GGG | + | Chr5:31329616-31329635 | None:intergenic | 30.0% | |
| TTCAACAAGTAGATAATCCA+AGG | - | Chr5:31330166-31330185 | MsG0580026144.01.T01:CDS | 30.0% | |
| TTCCTTTCTATTGCTGATAA+AGG | + | Chr5:31329617-31329636 | None:intergenic | 30.0% | |
| ! | AGAAAGTGCAAAGTTCAATA+TGG | - | Chr5:31329787-31329806 | MsG0580026144.01.T01:CDS | 30.0% |
| ! | AGTCAATAAGCTTTGATATG+AGG | - | Chr5:31330235-31330254 | MsG0580026144.01.T01:CDS | 30.0% |
| ! | ATGTTTGAAGAGTTTTTCTG+AGG | + | Chr5:31330040-31330059 | None:intergenic | 30.0% |
| ! | GATAATGATGATGATGATGT+TGG | - | Chr5:31330345-31330364 | MsG0580026144.01.T01:CDS | 30.0% |
| ! | GTTATTGTTGTTATTCTGAG+AGG | + | Chr5:31329521-31329540 | None:intergenic | 30.0% |
| !! | TCACTTGGTGCATAAAAATT+TGG | + | Chr5:31330480-31330499 | None:intergenic | 30.0% |
| !!! | GGCATCTCTTTATTGATTTT+GGG | + | Chr5:31330636-31330655 | None:intergenic | 30.0% |
| AAATCAATAAAGAGATGCCG+AGG | - | Chr5:31330637-31330656 | MsG0580026144.01.T01:CDS | 35.0% | |
| AATAACAACAATAACCTCCG+TGG | - | Chr5:31329526-31329545 | MsG0580026144.01.T01:CDS | 35.0% | |
| CCTTTCTATTGCTGATAAAG+GGG | + | Chr5:31329615-31329634 | None:intergenic | 35.0% | |
| CTCTTCATACTTGAACAACA+AGG | - | Chr5:31329558-31329577 | MsG0580026144.01.T01:CDS | 35.0% | |
| CTTCTTCTTTCTTTACTCCA+AGG | + | Chr5:31329648-31329667 | None:intergenic | 35.0% | |
| CTTGAACAACAAGGAAGTAA+AGG | - | Chr5:31329567-31329586 | MsG0580026144.01.T01:CDS | 35.0% | |
| GAAGACTCTTTCTATGAACT+TGG | + | Chr5:31329909-31329928 | None:intergenic | 35.0% | |
| GAGGCTTAAAATACCATCTT+GGG | - | Chr5:31330254-31330273 | MsG0580026144.01.T01:CDS | 35.0% | |
| GGAGTAAAGAAAGAAGAAGA+TGG | - | Chr5:31329649-31329668 | MsG0580026144.01.T01:CDS | 35.0% | |
| GTTTCAGATCATGAAGATCA+AGG | - | Chr5:31330552-31330571 | MsG0580026144.01.T01:CDS | 35.0% | |
| TGAGGCTTAAAATACCATCT+TGG | - | Chr5:31330253-31330272 | MsG0580026144.01.T01:CDS | 35.0% | |
| TGCACTTTCTATTCTCTTGT+TGG | + | Chr5:31329777-31329796 | None:intergenic | 35.0% | |
| TGTAATAGTCAGAAAGCTGT+TGG | - | Chr5:31330684-31330703 | MsG0580026144.01.T01:CDS | 35.0% | |
| ! | AACACTTCCAATGTTTTCCT+TGG | + | Chr5:31330186-31330205 | None:intergenic | 35.0% |
| ! | ACATCTAAGGTAGCAATTCT+TGG | + | Chr5:31329730-31329749 | None:intergenic | 35.0% |
| ! | CAGTTTGTAAAAGTGCACTT+TGG | + | Chr5:31329849-31329868 | None:intergenic | 35.0% |
| ! | TTCAACAAAAGTGCAGTTCA+TGG | - | Chr5:31330006-31330025 | MsG0580026144.01.T01:CDS | 35.0% |
| ! | TTTGAGATTGAAAGCTTGAC+TGG | - | Chr5:31330390-31330409 | MsG0580026144.01.T01:CDS | 35.0% |
| !! | AGGAAAACATTGGAAGTGTT+TGG | - | Chr5:31330186-31330205 | MsG0580026144.01.T01:CDS | 35.0% |
| !! | AGGTTTAAGGTGGAAAGTTT+TGG | - | Chr5:31330780-31330799 | MsG0580026144.01.T01:CDS | 35.0% |
| !!! | CGGCATCTCTTTATTGATTT+TGG | + | Chr5:31330637-31330656 | None:intergenic | 35.0% |
| AAATGTTGCCTCAGATGACA+AGG | - | Chr5:31330760-31330779 | MsG0580026144.01.T01:CDS | 40.0% | |
| AAGAGTCTTCTTGCTACTCT+TGG | - | Chr5:31329919-31329938 | MsG0580026144.01.T01:CDS | 40.0% | |
| ACCTTAAACCTTGTCATCTG+AGG | + | Chr5:31330771-31330790 | None:intergenic | 40.0% | |
| AGGAGATCAAATTCACCACA+TGG | - | Chr5:31330843-31330862 | MsG0580026144.01.T01:CDS | 40.0% | |
| ATGAAGAGAAAGAACCACCA+CGG | + | Chr5:31329546-31329565 | None:intergenic | 40.0% | |
| CAATATGGAACTCCAAGTGT+TGG | - | Chr5:31329802-31329821 | MsG0580026144.01.T01:CDS | 40.0% | |
| CATTCAATGCTTGCTTCACT+TGG | + | Chr5:31330495-31330514 | None:intergenic | 40.0% | |
| CCCCTTTATCAGCAATAGAA+AGG | - | Chr5:31329612-31329631 | MsG0580026144.01.T01:CDS | 40.0% | |
| GAATTTGATCTCCTAAGAGG+AGG | + | Chr5:31330837-31330856 | None:intergenic | 40.0% | |
| GGTGAATTTGATCTCCTAAG+AGG | + | Chr5:31330840-31330859 | None:intergenic | 40.0% | |
| GGTGCAAGAAATGAACAACA+TGG | - | Chr5:31330801-31330820 | MsG0580026144.01.T01:CDS | 40.0% | |
| GTTATGGAAAACCTCCTCTT+AGG | - | Chr5:31330823-31330842 | MsG0580026144.01.T01:CDS | 40.0% | |
| GTTGATGTAAGTGATCATGC+AGG | - | Chr5:31329973-31329992 | MsG0580026144.01.T01:CDS | 40.0% | |
| TACAAAAGTTGTGCACCATG+TGG | + | Chr5:31330861-31330880 | None:intergenic | 40.0% | |
| TCAGATGACAAGGTTTAAGG+TGG | - | Chr5:31330770-31330789 | MsG0580026144.01.T01:CDS | 40.0% | |
| TTCTATTGCTGATAAAGGGG+TGG | + | Chr5:31329612-31329631 | None:intergenic | 40.0% | |
| TTCTTTACTCCAAGGTGAAG+AGG | + | Chr5:31329640-31329659 | None:intergenic | 40.0% | |
| ! | GTTATTCTGAGAGGTGAAAG+TGG | + | Chr5:31329512-31329531 | None:intergenic | 40.0% |
| ! | TCAACATCACATGTTGCTTC+TGG | - | Chr5:31330444-31330463 | MsG0580026144.01.T01:CDS | 40.0% |
| !! | CAAGTGAAGCAAGCATTGAA+TGG | - | Chr5:31330493-31330512 | MsG0580026144.01.T01:CDS | 40.0% |
| !! | GTCATCTGAGGCAACATTTT+TGG | + | Chr5:31330759-31330778 | None:intergenic | 40.0% |
| AACAACAATAACCTCCGTGG+TGG | - | Chr5:31329529-31329548 | MsG0580026144.01.T01:CDS | 45.0% | |
| AGAAAGGAACCTCTTCACCT+TGG | - | Chr5:31329628-31329647 | MsG0580026144.01.T01:CDS | 45.0% | |
| CGGCGTCATGGAAAATTGTT+GGG | - | Chr5:31330660-31330679 | MsG0580026144.01.T01:CDS | 45.0% | |
| CTTGATTCTGAGCCAACACT+TGG | + | Chr5:31329817-31329836 | None:intergenic | 45.0% | |
| GCCTCAGATGACAAGGTTTA+AGG | - | Chr5:31330767-31330786 | MsG0580026144.01.T01:CDS | 45.0% | |
| TCAATAAAGAGATGCCGAGG+CGG | - | Chr5:31330640-31330659 | MsG0580026144.01.T01:CDS | 45.0% | |
| !! | AGCAAGCATTGAATGGAGTG+TGG | - | Chr5:31330500-31330519 | MsG0580026144.01.T01:CDS | 45.0% |
| !! | GGGTGGATTGAATCAGCAAA+AGG | + | Chr5:31329595-31329614 | None:intergenic | 45.0% |
| AAGAGAAAGAACCACCACGG+AGG | + | Chr5:31329543-31329562 | None:intergenic | 50.0% | |
| GCGGCGTCATGGAAAATTGT+TGG | - | Chr5:31330659-31330678 | MsG0580026144.01.T01:CDS | 50.0% | |
| TTCGAAGCAGCTTCCCAAGA+TGG | + | Chr5:31330270-31330289 | None:intergenic | 50.0% | |
| ! | AATTTTCCATGACGCCGCCT+CGG | + | Chr5:31330657-31330676 | None:intergenic | 50.0% |
| !! | CAGAAAGCTGTTGGTGTTGC+TGG | - | Chr5:31330693-31330712 | MsG0580026144.01.T01:CDS | 50.0% |
| AACCGAGACTCGTGCTGCAG+CGG | - | Chr5:31330098-31330117 | MsG0580026144.01.T01:CDS | 60.0% | |
| TTCCGCTGCAGCACGAGTCT+CGG | + | Chr5:31330103-31330122 | None:intergenic | 60.0% | |
| GAGATGCCGAGGCGGCGTCA+TGG | - | Chr5:31330648-31330667 | MsG0580026144.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 31329493 | 31330887 | 31329493 | ID=MsG0580026144.01;Name=MsG0580026144.01 |
| Chr5 | mRNA | 31329493 | 31330887 | 31329493 | ID=MsG0580026144.01.T01;Parent=MsG0580026144.01;Name=MsG0580026144.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|464 |
| Chr5 | exon | 31329493 | 31330887 | 31329493 | ID=MsG0580026144.01.T01:exon:13075;Parent=MsG0580026144.01.T01 |
| Chr5 | CDS | 31329493 | 31330887 | 31329493 | ID=MsG0580026144.01.T01:cds;Parent=MsG0580026144.01.T01 |
| Gene Sequence |
| Protein sequence |
