AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039256.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039256.01.T01 MTR_7g068910 76.984 504 57 4 3 502 1 449 0.0 784
MsG0780039256.01.T01 MTR_7g068910 77.137 503 48 4 3 502 1 439 0.0 780
MsG0780039256.01.T01 MTR_4g016920 58.017 474 132 4 32 502 26 435 0.0 549
MsG0780039256.01.T01 MTR_7g068900 69.067 375 88 2 129 502 17 364 0.0 536
MsG0780039256.01.T01 MTR_4g016920 64.770 369 103 1 134 502 1 342 6.29e-175 499
MsG0780039256.01.T01 MTR_5g068740 48.024 506 181 8 7 502 1 434 2.03e-155 453
MsG0780039256.01.T01 MTR_1g088610 50.418 478 156 7 34 502 28 433 1.48e-154 455
MsG0780039256.01.T01 MTR_1g088610 40.566 106 54 2 401 502 458 558 1.98e-12 70.1
MsG0780039256.01.T01 MTR_4g016920 66.026 312 79 1 134 445 1 285 1.77e-148 427
MsG0780039256.01.T01 MTR_1g088630 46.711 456 141 7 53 502 18 377 5.84e-133 394
MsG0780039256.01.T01 MTR_1g088630 46.429 420 117 8 35 441 29 353 1.74e-120 358
MsG0780039256.01.T01 MTR_4g083000 37.302 504 235 9 15 502 10 448 3.49e-113 344
MsG0780039256.01.T01 MTR_3g026400 39.376 513 227 11 11 503 7 455 7.24e-112 341
MsG0780039256.01.T01 MTR_1g088630 52.108 332 79 6 35 357 29 289 2.04e-109 328
MsG0780039256.01.T01 MTR_2g098790 39.300 514 230 10 5 502 12 459 3.62e-109 334
MsG0780039256.01.T01 MTR_5g044000 36.711 523 231 8 16 502 8 466 6.50e-109 334
MsG0780039256.01.T01 MTR_2g098540 38.760 516 236 9 3 502 1 452 3.32e-108 332
MsG0780039256.01.T01 MTR_3g026620 39.062 512 227 11 12 502 8 455 3.93e-107 329
MsG0780039256.01.T01 MTR_2g098520 39.220 487 216 9 32 502 33 455 7.36e-106 326
MsG0780039256.01.T01 MTR_3g026280 38.866 494 225 9 21 502 10 438 1.74e-105 324
MsG0780039256.01.T01 MTR_4g066590 38.105 496 227 8 23 502 23 454 8.11e-104 321
MsG0780039256.01.T01 MTR_6g078450 40.501 479 205 9 32 494 35 449 1.48e-103 318
MsG0780039256.01.T01 MTR_6g078330 38.372 516 236 11 5 502 7 458 4.33e-103 319
MsG0780039256.01.T01 MTR_3g026400 41.784 426 172 9 11 424 7 368 5.60e-103 314
MsG0780039256.01.T01 MTR_3g026400 37.832 489 230 9 24 503 1 424 6.58e-103 317
MsG0780039256.01.T01 MTR_6g078380 40.870 460 199 8 32 481 35 431 7.49e-103 318
MsG0780039256.01.T01 MTR_6g078450 40.501 479 205 9 32 494 35 449 1.15e-102 318
MsG0780039256.01.T01 MTR_4g066580 38.193 487 221 8 32 502 38 460 1.17e-102 318
MsG0780039256.01.T01 MTR_4g066580 39.648 454 200 7 32 475 38 427 2.94e-102 314
MsG0780039256.01.T01 MTR_4g023000 38.809 487 220 10 20 494 11 431 9.41e-102 315
MsG0780039256.01.T01 MTR_4g083000 41.623 382 182 5 134 502 1 354 1.93e-101 311
MsG0780039256.01.T01 MTR_4g067040 43.333 390 153 6 28 412 29 355 4.94e-101 309
MsG0780039256.01.T01 MTR_4g066240 37.372 487 223 10 33 502 36 457 8.98e-101 313
MsG0780039256.01.T01 MTR_4g067040 43.333 390 153 6 28 412 29 355 1.03e-100 309
MsG0780039256.01.T01 MTR_3g028720 37.988 487 220 10 1 475 10 426 1.20e-100 310
MsG0780039256.01.T01 MTR_4g081530 36.895 496 234 9 22 502 13 444 2.87e-100 311
MsG0780039256.01.T01 MTR_3g028720 36.914 512 235 11 1 494 10 451 3.64e-100 309
MsG0780039256.01.T01 MTR_4g066240 37.578 479 217 10 33 494 36 449 5.85e-100 311
MsG0780039256.01.T01 MTR_4g066240 39.024 451 199 9 33 472 36 421 8.22e-100 307
MsG0780039256.01.T01 MTR_2g079550 35.597 486 233 9 32 502 29 449 1.09e-99 310
MsG0780039256.01.T01 MTR_3g028720 36.914 512 235 11 1 494 10 451 2.80e-99 309
MsG0780039256.01.T01 MTR_4g066210 36.454 502 207 10 33 502 43 464 2.99e-99 309
MsG0780039256.01.T01 MTR_2g079580 35.597 486 233 9 32 502 31 451 5.41e-99 308
MsG0780039256.01.T01 MTR_4g066630 37.578 479 219 9 32 494 38 452 1.00e-98 306
MsG0780039256.01.T01 MTR_2g098540 43.299 388 179 5 128 502 49 408 1.30e-98 305
MsG0780039256.01.T01 MTR_4g066630 38.803 451 202 8 32 472 38 424 2.11e-98 304
MsG0780039256.01.T01 MTR_6g078330 41.205 415 174 8 5 412 7 358 2.44e-98 302
MsG0780039256.01.T01 MTR_4g066630 37.578 479 219 9 32 494 38 452 9.05e-98 305
MsG0780039256.01.T01 MTR_3g028720 39.857 419 176 8 1 412 10 359 8.59e-97 299
MsG0780039256.01.T01 MTR_2g079580 36.667 450 211 8 32 472 31 415 5.31e-96 297
MsG0780039256.01.T01 MTR_4g066630 40.394 406 173 7 32 432 38 379 2.49e-95 294
MsG0780039256.01.T01 MTR_5g071520 38.911 496 214 10 32 502 38 469 2.98e-95 299
MsG0780039256.01.T01 MTR_4g066340 41.237 388 187 5 128 502 25 384 6.16e-95 295
MsG0780039256.01.T01 MTR_2g022710 34.490 490 240 8 32 505 34 458 1.53e-93 293
MsG0780039256.01.T01 MTR_2g022710 34.490 490 240 8 32 505 34 458 1.92e-93 293
MsG0780039256.01.T01 MTR_4g066640 36.605 489 224 11 32 502 38 458 4.06e-93 293
MsG0780039256.01.T01 MTR_0110s0030 36.270 488 221 9 32 501 42 457 4.57e-93 293
MsG0780039256.01.T01 MTR_2g022710 34.702 487 237 9 32 502 34 455 9.92e-92 290
MsG0780039256.01.T01 MTR_3g033810 35.258 485 225 9 32 502 20 429 2.45e-91 288
MsG0780039256.01.T01 MTR_4g066640 40.665 391 160 7 32 416 38 362 1.66e-90 282
MsG0780039256.01.T01 MTR_0110s0040 36.066 488 222 9 32 501 42 457 1.91e-90 286
MsG0780039256.01.T01 MTR_0110s0040 40.000 410 173 8 32 434 42 385 5.34e-90 281
MsG0780039256.01.T01 MTR_6g078330 41.361 382 183 5 134 502 1 354 2.72e-89 280
MsG0780039256.01.T01 MTR_3g033790 34.959 492 226 11 27 502 13 426 1.70e-88 280
MsG0780039256.01.T01 MTR_4g131810 33.195 482 242 8 38 502 33 451 7.26e-88 280
MsG0780039256.01.T01 MTR_2g022760 35.282 479 230 9 40 502 43 457 5.74e-87 277
MsG0780039256.01.T01 MTR_2g022710 34.590 451 220 8 32 472 34 419 4.68e-86 271
MsG0780039256.01.T01 MTR_2g022710 37.435 382 198 5 134 502 1 354 1.15e-84 268
MsG0780039256.01.T01 MTR_2g022760 38.743 382 193 5 134 502 1 354 2.84e-84 267
MsG0780039256.01.T01 MTR_4g066330 35.174 489 211 10 32 503 40 439 4.97e-83 266
MsG0780039256.01.T01 MTR_4g131800 33.607 488 229 9 38 502 521 936 6.61e-81 272
MsG0780039256.01.T01 MTR_2g022710 34.018 438 214 8 32 459 34 406 2.97e-80 256
MsG0780039256.01.T01 MTR_4g066280 32.871 505 231 10 17 503 25 439 4.21e-80 258
MsG0780039256.01.T01 MTR_2g022710 35.181 415 200 7 32 442 34 383 5.65e-80 256
MsG0780039256.01.T01 MTR_6g078330 40.000 370 179 6 146 502 15 354 1.28e-78 252
MsG0780039256.01.T01 MTR_7g033860 32.432 481 238 11 35 501 50 457 4.52e-76 248
MsG0780039256.01.T01 MTR_0108s0030 32.278 474 224 10 38 501 8 394 1.38e-74 243
MsG0780039256.01.T01 MTR_2g043200 32.681 511 234 10 12 502 44 464 7.73e-69 229
MsG0780039256.01.T01 MTR_7g051650 32.158 482 234 11 34 501 76 478 1.30e-68 229
MsG0780039256.01.T01 MTR_4g015460 30.814 516 243 11 11 502 20 445 1.08e-67 226
MsG0780039256.01.T01 MTR_7g051650 32.083 480 233 12 34 501 76 474 6.61e-67 225
MsG0780039256.01.T01 MTR_4g015420 30.980 510 236 11 19 502 51 470 1.02e-66 224
MsG0780039256.01.T01 MTR_7g051610 32.708 480 233 11 34 501 76 477 5.48e-66 223
MsG0780039256.01.T01 MTR_7g051510 32.640 481 232 12 34 501 76 477 4.38e-65 220
MsG0780039256.01.T01 MTR_7g056747 35.356 379 198 7 127 501 8 343 3.28e-63 211
MsG0780039256.01.T01 MTR_0110s0020 40.068 292 105 7 32 319 42 267 3.45e-61 203
MsG0780039256.01.T01 MTR_8g038650 73.016 126 24 1 305 420 35 160 1.59e-56 186
MsG0780039256.01.T01 MTR_8g038650 77.500 40 6 1 40 76 5 44 1.10e-12 66.6
MsG0780039256.01.T01 MTR_7g028885 80.000 65 9 1 302 362 26 90 8.98e-28 106
MsG0780039256.01.T01 MTR_5g049830 84.444 45 5 1 361 405 14 56 1.65e-16 73.9
MsG0780039256.01.T01 MTR_5g049640 84.444 45 5 1 361 405 14 56 1.65e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039256.01.T01 AT1G02850 49.163 478 171 6 29 502 22 431 8.58e-159 461
MsG0780039256.01.T01 AT1G02850 47.106 501 170 7 29 502 22 454 1.35e-154 451
MsG0780039256.01.T01 AT1G02850 47.000 500 170 7 29 501 22 453 8.39e-154 449
MsG0780039256.01.T01 AT1G02850 47.346 471 153 7 29 472 22 424 2.13e-147 429
MsG0780039256.01.T01 AT1G02850 46.653 478 156 7 29 502 22 404 2.23e-144 423
MsG0780039256.01.T01 AT4G27830 44.689 499 196 9 14 502 2 430 7.01e-138 408
MsG0780039256.01.T01 AT4G22100 44.040 495 200 9 16 502 3 428 9.41e-134 397
MsG0780039256.01.T01 AT4G27820 44.792 480 183 8 32 502 22 428 1.59e-129 386
MsG0780039256.01.T01 AT1G60090 42.262 504 202 12 12 502 1 428 1.77e-126 379
MsG0780039256.01.T01 AT1G45191 41.026 507 211 11 12 502 1 435 9.88e-126 377
MsG0780039256.01.T01 AT1G45191 40.828 507 206 12 12 502 1 429 9.97e-125 374
MsG0780039256.01.T01 AT1G45191 41.211 512 220 11 12 502 1 452 3.26e-124 374
MsG0780039256.01.T01 AT1G60090 41.586 517 194 14 12 502 1 435 3.50e-124 373
MsG0780039256.01.T01 AT1G45191 41.016 512 209 12 12 502 1 440 3.83e-124 373
MsG0780039256.01.T01 AT4G27830 49.465 374 152 4 134 502 1 342 8.31e-124 369
MsG0780039256.01.T01 AT3G62750 42.105 494 195 10 20 503 34 446 2.20e-123 369
MsG0780039256.01.T01 AT3G62750 41.988 493 195 10 20 502 8 419 2.37e-122 368
MsG0780039256.01.T01 AT3G62750 41.988 493 195 10 20 502 34 445 4.49e-122 368
MsG0780039256.01.T01 AT4G27820 49.194 372 157 3 134 502 1 343 1.36e-117 353
MsG0780039256.01.T01 AT4G27820 49.194 372 157 3 134 502 1 343 1.36e-117 353
MsG0780039256.01.T01 AT3G62740 39.506 486 218 7 21 501 9 423 5.43e-116 349
MsG0780039256.01.T01 AT1G45191 42.022 445 172 10 12 442 1 373 4.40e-115 346
MsG0780039256.01.T01 AT3G62740 39.506 486 218 7 21 501 9 423 4.81e-115 349
MsG0780039256.01.T01 AT1G45191 42.661 436 164 10 12 433 1 364 6.14e-115 346
MsG0780039256.01.T01 AT1G26560 38.066 486 220 9 33 502 32 452 1.05e-112 343
MsG0780039256.01.T01 AT1G60270 44.917 423 145 10 21 428 6 355 4.39e-112 337
MsG0780039256.01.T01 AT3G62750 42.755 421 152 8 20 430 8 349 7.00e-111 334
MsG0780039256.01.T01 AT3G62750 42.755 421 152 8 20 430 8 349 7.00e-111 334
MsG0780039256.01.T01 AT3G62750 42.689 424 154 8 20 433 34 378 1.51e-110 335
MsG0780039256.01.T01 AT3G62750 46.524 374 155 6 134 502 1 334 2.55e-107 326
MsG0780039256.01.T01 AT3G62750 46.524 374 155 6 134 502 1 334 2.55e-107 326
MsG0780039256.01.T01 AT2G44480 39.535 473 207 11 32 489 34 442 2.47e-105 325
MsG0780039256.01.T01 AT2G44480 39.535 473 207 11 32 489 65 473 8.55e-105 324
MsG0780039256.01.T01 AT1G60270 50.842 297 115 4 134 428 1 268 5.48e-100 303
MsG0780039256.01.T01 AT3G18080 36.747 498 219 10 32 504 38 464 1.03e-96 302
MsG0780039256.01.T01 AT2G44480 42.391 368 172 7 134 489 1 340 6.18e-94 292
MsG0780039256.01.T01 AT5G54570 35.438 491 235 10 29 502 26 451 9.46e-94 293
MsG0780039256.01.T01 AT3G18070 37.630 481 203 10 32 494 29 430 1.10e-93 294
MsG0780039256.01.T01 AT3G18070 37.838 481 208 11 32 494 29 436 3.23e-93 293
MsG0780039256.01.T01 AT5G26000 35.818 483 233 8 33 502 38 456 4.05e-93 291
MsG0780039256.01.T01 AT2G44480 41.710 386 152 9 32 409 65 385 5.06e-93 289
MsG0780039256.01.T01 AT5G54570 35.438 491 235 10 29 502 26 451 1.10e-92 292
MsG0780039256.01.T01 AT5G26000 35.818 483 233 8 33 502 38 456 5.34e-92 291
MsG0780039256.01.T01 AT2G25630 36.546 498 231 11 12 501 9 429 5.42e-92 289
MsG0780039256.01.T01 AT5G44640 36.000 500 242 10 15 501 13 447 7.63e-92 290
MsG0780039256.01.T01 AT1G61810 35.477 482 230 10 38 502 38 455 3.53e-90 286
MsG0780039256.01.T01 AT1G61810 35.477 482 230 10 38 502 38 455 3.90e-90 285
MsG0780039256.01.T01 AT5G42260 36.100 482 230 10 33 501 31 447 4.72e-90 285
MsG0780039256.01.T01 AT2G44450 35.611 483 238 9 29 501 27 446 1.78e-89 283
MsG0780039256.01.T01 AT3G18070 39.750 400 171 7 32 428 29 361 1.09e-88 277
MsG0780039256.01.T01 AT3G60140 36.522 460 211 11 29 474 22 414 5.10e-88 278
MsG0780039256.01.T01 AT1G61820 33.721 516 258 11 7 502 1 452 5.55e-88 280
MsG0780039256.01.T01 AT1G61810 36.607 448 209 9 38 474 38 421 6.48e-88 276
MsG0780039256.01.T01 AT3G60140 35.317 504 232 13 29 505 22 458 2.33e-87 280
MsG0780039256.01.T01 AT5G25980 35.537 484 232 10 33 502 50 467 2.58e-87 276
MsG0780039256.01.T01 AT5G25980 35.537 484 232 10 33 502 50 467 2.58e-87 276
MsG0780039256.01.T01 AT3G60130 35.208 480 237 9 33 501 30 446 4.83e-87 277
MsG0780039256.01.T01 AT1G51470 36.484 455 211 9 29 476 41 424 6.54e-87 277
MsG0780039256.01.T01 AT5G25980 35.318 487 229 10 33 502 50 467 2.30e-86 276
MsG0780039256.01.T01 AT1G47600 36.123 454 213 9 29 476 41 423 7.23e-86 274
MsG0780039256.01.T01 AT1G47600 36.044 455 213 9 29 476 41 424 9.70e-86 274
MsG0780039256.01.T01 AT5G54570 38.903 383 191 6 134 502 1 354 3.69e-85 270
MsG0780039256.01.T01 AT2G44470 33.333 492 245 12 28 501 24 450 3.38e-84 268
MsG0780039256.01.T01 AT5G24550 34.350 492 239 10 29 501 28 454 2.33e-83 268
MsG0780039256.01.T01 AT2G44470 33.400 503 245 13 28 505 24 461 1.08e-82 268
MsG0780039256.01.T01 AT1G61810 38.642 383 193 7 134 502 1 355 3.22e-82 262
MsG0780039256.01.T01 AT5G36890 34.356 489 222 12 34 502 17 426 7.53e-82 263
MsG0780039256.01.T01 AT5G36890 34.356 489 222 12 34 502 17 426 7.81e-82 263
MsG0780039256.01.T01 AT2G44470 36.317 391 179 8 28 412 24 350 5.76e-81 258
MsG0780039256.01.T01 AT3G60120 32.790 491 242 11 32 502 13 435 5.68e-80 259
MsG0780039256.01.T01 AT2G32860 33.135 504 244 13 22 502 84 517 8.16e-80 261
MsG0780039256.01.T01 AT5G24540 35.223 494 232 11 29 501 28 454 2.32e-79 255
MsG0780039256.01.T01 AT4G21760 30.882 476 253 8 38 502 59 469 4.27e-79 257
MsG0780039256.01.T01 AT5G24540 35.223 494 232 11 29 501 28 454 3.07e-78 255
MsG0780039256.01.T01 AT3G09260 33.131 495 245 12 26 501 28 455 8.89e-78 253
MsG0780039256.01.T01 AT2G32860 33.069 505 242 14 22 502 84 516 3.07e-77 254
MsG0780039256.01.T01 AT4G21760 31.277 470 249 9 38 502 59 459 1.43e-76 250
MsG0780039256.01.T01 AT1G66280 32.874 508 242 15 12 494 15 448 4.26e-76 249
MsG0780039256.01.T01 AT3G60130 36.554 383 195 6 128 501 40 383 1.43e-75 245
MsG0780039256.01.T01 AT3G60130 36.649 382 207 5 128 501 40 394 2.22e-75 245
MsG0780039256.01.T01 AT2G44460 34.949 495 232 13 28 501 24 449 5.94e-75 248
MsG0780039256.01.T01 AT5G28510 33.535 495 234 13 33 501 39 464 1.62e-74 245
MsG0780039256.01.T01 AT3G03640 32.031 512 254 15 4 491 5 446 5.15e-74 244
MsG0780039256.01.T01 AT1G66270 34.199 462 221 12 26 473 29 421 5.43e-74 243
MsG0780039256.01.T01 AT2G44490 31.388 497 252 12 27 501 8 437 2.44e-73 243
MsG0780039256.01.T01 AT1G75940 32.860 493 240 15 33 501 37 462 4.82e-72 238
MsG0780039256.01.T01 AT3G21370 32.000 500 233 15 26 494 26 449 5.04e-71 236
MsG0780039256.01.T01 AT1G66270 33.766 462 221 13 26 473 29 419 1.38e-70 234
MsG0780039256.01.T01 AT5G16580 45.238 294 147 7 215 502 4 289 3.15e-70 226
MsG0780039256.01.T01 AT5G48375 39.316 351 156 6 128 472 89 388 3.97e-70 231
MsG0780039256.01.T01 AT1G52400 32.479 468 220 14 37 483 43 435 5.99e-66 220
MsG0780039256.01.T01 AT1G61810 37.273 330 139 7 33 358 33 298 7.53e-66 216
MsG0780039256.01.T01 AT1G52400 32.479 468 220 14 37 483 43 435 3.39e-65 220
MsG0780039256.01.T01 AT1G52400 32.479 468 220 14 37 483 43 435 3.39e-65 220
MsG0780039256.01.T01 AT1G61820 35.503 338 177 5 178 502 4 313 1.35e-62 209
MsG0780039256.01.T01 AT1G51490 34.430 395 179 10 41 430 28 347 5.35e-61 206
MsG0780039256.01.T01 AT3G18070 39.560 273 143 5 237 494 94 359 1.69e-54 189
MsG0780039256.01.T01 AT2G44450 33.230 322 183 4 185 501 1 295 2.17e-53 184
MsG0780039256.01.T01 AT3G18070 40.081 247 130 4 237 472 94 333 5.95e-52 180
MsG0780039256.01.T01 AT2G44480 39.241 237 133 5 263 489 1 236 7.57e-50 173
MsG0780039256.01.T01 AT3G18070 38.735 253 133 5 257 494 2 247 4.36e-48 169
MsG0780039256.01.T01 AT2G44460 36.119 335 166 7 183 501 1 303 1.09e-46 168
MsG0780039256.01.T01 AT3G18070 39.207 227 120 4 257 472 2 221 1.66e-45 159

Find 114 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTGCAACATGGATTTAT+TGG 0.194213 7:-60827837 MsG0780039256.01.T01:CDS
TATTACTTGAAGAATGATTA+TGG 0.208029 7:-60827023 MsG0780039256.01.T01:CDS
TAACACCTCTTGAAAATTCT+TGG 0.213777 7:+60827046 None:intergenic
GGGTTTAATCTTCTTACTTT+TGG 0.226899 7:-60827816 MsG0780039256.01.T01:CDS
CCAATTTACATACATGAAAA+TGG 0.227583 7:-60826993 MsG0780039256.01.T01:intron
TTCTTCAACTGAGCCATATT+TGG 0.244204 7:-60828042 MsG0780039256.01.T01:CDS
GCAATGTTTGGCTATGATAT+TGG 0.252000 7:-60828122 MsG0780039256.01.T01:CDS
CTTAAAGCATGGGAAAGTTT+TGG 0.255545 7:+60828535 None:intergenic
TACTCCATGTTCAGGCTTGC+AGG 0.263410 7:+60827358 None:intergenic
AAGAGCTCAATTGACTTCTT+AGG 0.264244 7:-60827418 MsG0780039256.01.T01:CDS
TTGTAATATTGTAGTCCTTT+AGG 0.270990 7:+60828758 None:intergenic
TGAAAATTCTTGGTTGTAAT+CGG 0.280116 7:+60827056 None:intergenic
GGATAATCACCAAATGTTAA+TGG 0.283735 7:+60827508 None:intergenic
ATATGATGAGCTGCCAAATA+TGG 0.293208 7:+60828029 None:intergenic
GTCAATATTTATGCAATGTT+TGG 0.295176 7:-60828134 MsG0780039256.01.T01:CDS
GTGTTAACCCTCCGGTTCTA+AGG 0.312620 7:-60828499 MsG0780039256.01.T01:CDS
TTCCCTTCTGACTTTGTGTT+TGG 0.340012 7:-60829849 MsG0780039256.01.T01:CDS
GTAATTCATCCTTGAATGAT+TGG 0.342135 7:-60826852 MsG0780039256.01.T01:CDS
GTTTGCAACATGGATTTATT+GGG 0.350165 7:-60827836 MsG0780039256.01.T01:CDS
CACATGTTACATTACATCAT+TGG 0.353709 7:-60828622 MsG0780039256.01.T01:CDS
GATGTGTGCTTCAAAGAATT+TGG 0.360232 7:-60828191 MsG0780039256.01.T01:CDS
GGACCATAGCTAATGAAATA+AGG 0.360367 7:-60826798 MsG0780039256.01.T01:CDS
TTGTAGTCCTTTAGGATTGA+TGG 0.365010 7:+60828766 None:intergenic
ACCTTTGCCCATGGTGGAAA+TGG 0.365475 7:-60829449 MsG0780039256.01.T01:intron
CATAAGCACAATCATGAGTA+TGG 0.373354 7:-60829973 None:intergenic
GTTCTAAATCCATTAACATT+TGG 0.377842 7:-60827517 MsG0780039256.01.T01:CDS
CCTTGAGCAGTTAGCTAGAA+AGG 0.388723 7:+60828070 None:intergenic
TTCTAAGGGGAAAGGGGCTC+TGG 0.391720 7:-60828484 MsG0780039256.01.T01:intron
CATCCTTGAATGATTGGTCT+AGG 0.400119 7:-60826846 MsG0780039256.01.T01:CDS
CCATGATATTGAAAATCTAT+AGG 0.404374 7:+60829068 None:intergenic
ATGGCAGGAAACCAAGCATA+TGG 0.425229 7:-60829475 MsG0780039256.01.T01:CDS
AGCCCCTTTCCCCTTAGAAC+CGG 0.431256 7:+60828488 None:intergenic
TCATGGTCGCGACTTATTCC+AGG 0.437870 7:-60829051 MsG0780039256.01.T01:intron
ACATGTTACATTACATCATT+GGG 0.438409 7:-60828621 MsG0780039256.01.T01:CDS
TAGAGATTACATGCAAGATA+TGG 0.448008 7:-60827335 MsG0780039256.01.T01:CDS
CACCCTAGACCAATCATTCA+AGG 0.449983 7:+60826843 None:intergenic
ATTTGCTTAGTGCGATGTTT+AGG 0.450806 7:+60829150 None:intergenic
AATCTCTATACTCCATGTTC+AGG 0.455318 7:+60827350 None:intergenic
ACCACCCCATCATGAAGTCT+TGG 0.455704 7:+60827742 None:intergenic
GTACCTTATTTCATTAGCTA+TGG 0.466073 7:+60826795 None:intergenic
ATTGTACAGGAAGAAATATA+AGG 0.468830 7:-60827979 MsG0780039256.01.T01:intron
CCACCCCATCATGAAGTCTT+GGG 0.477044 7:+60827743 None:intergenic
CCTCCGGTTCTAAGGGGAAA+GGG 0.479590 7:-60828491 MsG0780039256.01.T01:CDS
CCTTTCTAGCTAACTGCTCA+AGG 0.483493 7:-60828070 MsG0780039256.01.T01:CDS
ACTTCCTTCCTTCACAGTAA+AGG 0.485769 7:-60827455 MsG0780039256.01.T01:CDS
TGTAGTCCTTTAGGATTGAT+GGG 0.486907 7:+60828767 None:intergenic
TTGGCGATCGAGTTAAGTAC+TGG 0.498355 7:-60828172 MsG0780039256.01.T01:CDS
AAGATATAATTGCTACTCAA+AGG 0.505473 7:-60827767 MsG0780039256.01.T01:CDS
GACAATACCATTTCCACCAT+GGG 0.514101 7:+60829442 None:intergenic
TGTTAACCCTCCGGTTCTAA+GGG 0.516412 7:-60828498 MsG0780039256.01.T01:CDS
CCCTTTCCCCTTAGAACCGG+AGG 0.521299 7:+60828491 None:intergenic
AGTACTTGCATAAATACATT+GGG 0.526639 7:-60826819 MsG0780039256.01.T01:CDS
ATCCTTGAATGATTGGTCTA+GGG 0.527356 7:-60826845 MsG0780039256.01.T01:CDS
CAATCCTGCAAGCCTGAACA+TGG 0.535531 7:-60827362 MsG0780039256.01.T01:CDS
ACTGTGAAGGAAGGAAGTCT+TGG 0.536319 7:+60827460 None:intergenic
TTGTTCAAACTATAAGCACT+AGG 0.539164 7:+60829879 None:intergenic
TGAGTTCGACATCTTCCTGC+AGG 0.542545 7:+60829112 None:intergenic
CCCTCCGGTTCTAAGGGGAA+AGG 0.542730 7:-60828492 MsG0780039256.01.T01:CDS
ATTTGATTCCTTTACTGTGA+AGG 0.542853 7:+60827447 None:intergenic
GATGTAATGTAACATGTGCT+TGG 0.543711 7:+60828627 None:intergenic
TTGAGGATGAATATGAAGGA+TGG 0.549482 7:-60828583 MsG0780039256.01.T01:CDS
AAAGGACCCATCAATCCTAA+AGG 0.554693 7:-60828773 MsG0780039256.01.T01:CDS
GCAAAGGTATCCCATATGCT+TGG 0.555595 7:+60829464 None:intergenic
GTGCAGCAAATCAAGATGGC+AGG 0.557938 7:-60829490 MsG0780039256.01.T01:intron
AAAGTGCAGGGTTTGCAACA+TGG 0.558527 7:-60827846 MsG0780039256.01.T01:intron
TGTCGAACTCATGGCCAACA+TGG 0.559248 7:-60829100 MsG0780039256.01.T01:CDS
TGGCAGGAAACCAAGCATAT+GGG 0.560662 7:-60829474 MsG0780039256.01.T01:CDS
CGATGGATATCACAAATACA+AGG 0.562182 7:-60829270 MsG0780039256.01.T01:intron
AGGGCCCAAGACTTCATGAT+GGG 0.562999 7:-60827747 MsG0780039256.01.T01:CDS
AGATATAATTGCTACTCAAA+GGG 0.563841 7:-60827766 MsG0780039256.01.T01:CDS
CTTTCTAGCTAACTGCTCAA+GGG 0.564017 7:-60828069 MsG0780039256.01.T01:CDS
TATTCATCCTCAAGTGATTG+TGG 0.564080 7:+60828593 None:intergenic
GCAGGAAGATGTCGAACTCA+TGG 0.566945 7:-60829109 MsG0780039256.01.T01:CDS
AAGTACTTGCATAAATACAT+TGG 0.567174 7:-60826820 MsG0780039256.01.T01:CDS
GAGCAGTTAGCTAGAAAGGA+AGG 0.568345 7:+60828074 None:intergenic
GACGGAGATATTGCATGCGA+TGG 0.570077 7:-60829287 MsG0780039256.01.T01:CDS
GTACTGGACCACGGTGAATG+AGG 0.570570 7:-60828156 MsG0780039256.01.T01:CDS
GATTCCTTTACTGTGAAGGA+AGG 0.570998 7:+60827451 None:intergenic
CTCCGGTTCTAAGGGGAAAG+GGG 0.571653 7:-60828490 MsG0780039256.01.T01:CDS
ACCATTTCCACCATGGGCAA+AGG 0.574344 7:+60829448 None:intergenic
TCACTTGAGGATGAATATGA+AGG 0.576463 7:-60828587 MsG0780039256.01.T01:CDS
TGAGGATGAATATGAAGGAT+GGG 0.578320 7:-60828582 MsG0780039256.01.T01:CDS
ACACCAAACACAAAGTCAGA+AGG 0.580548 7:+60829846 None:intergenic
ATGTATTTACCAGATGGTAA+AGG 0.581242 7:-60828791 MsG0780039256.01.T01:intron
CATCTTCCTGCAGGAAATCG+AGG 0.587827 7:+60829121 None:intergenic
GCGAATATGTACAAGGGTGA+CGG 0.593362 7:-60829305 MsG0780039256.01.T01:CDS
GGACAATACCATTTCCACCA+TGG 0.595529 7:+60829441 None:intergenic
TGTTCAAACTATAAGCACTA+GGG 0.596146 7:+60829880 None:intergenic
CTTCTGCTGCAAGATTGTAC+AGG 0.599723 7:-60827992 MsG0780039256.01.T01:CDS
CACCAAACACAAAGTCAGAA+GGG 0.600461 7:+60829847 None:intergenic
AAGGGCCCAAGACTTCATGA+TGG 0.602550 7:-60827748 MsG0780039256.01.T01:CDS
TTTCTAGCTAACTGCTCAAG+GGG 0.603830 7:-60828068 MsG0780039256.01.T01:CDS
GTCGAACTCATGGCCAACAT+GGG 0.608501 7:-60829099 MsG0780039256.01.T01:CDS
ACAAGACCTCGATTTCCTGC+AGG 0.608922 7:-60829127 MsG0780039256.01.T01:CDS
CCCAAGACTTCATGATGGGG+TGG 0.613603 7:-60827743 MsG0780039256.01.T01:intron
GTTTGGCTATGATATTGGAA+TGG 0.622668 7:-60828117 MsG0780039256.01.T01:CDS
TGGGATACCTTTGCCCATGG+TGG 0.626698 7:-60829455 MsG0780039256.01.T01:CDS
CCTTTCCCCTTAGAACCGGA+GGG 0.628198 7:+60828492 None:intergenic
TTACATGCAAGATATGGCAG+TGG 0.628249 7:-60827329 MsG0780039256.01.T01:CDS
TTGGAATGGCACCGCCTCAG+AGG 0.629344 7:-60828103 MsG0780039256.01.T01:CDS
ATATGGGATACCTTTGCCCA+TGG 0.631693 7:-60829458 MsG0780039256.01.T01:CDS
ATAAATGAACTGATAAGCCA+CGG 0.631869 7:-60828728 MsG0780039256.01.T01:intron
GAAGGTGCAGCAAATCAAGA+TGG 0.633360 7:-60829494 MsG0780039256.01.T01:intron
AAATGATACATCAATAGATG+AGG 0.637241 7:-60827176 MsG0780039256.01.T01:intron
GGATCTACCACAATCACTTG+AGG 0.639081 7:-60828600 MsG0780039256.01.T01:CDS
TCTTCACTAGTATTTGTCAG+TGG 0.645429 7:+60827786 None:intergenic
GAAGGAGAACACCTCTGAGG+CGG 0.652236 7:+60828092 None:intergenic
AAATTCTTTGAAGCACACAT+CGG 0.653442 7:+60828193 None:intergenic
ATAGGCATCTAAGCCCATGT+TGG 0.654884 7:+60829086 None:intergenic
GGGCCCAAGACTTCATGATG+GGG 0.691282 7:-60827746 MsG0780039256.01.T01:CDS
GTTAACCCTCCGGTTCTAAG+GGG 0.695697 7:-60828497 MsG0780039256.01.T01:CDS
AAGGAAGGAGAACACCTCTG+AGG 0.721271 7:+60828089 None:intergenic
TCGAGTTAAGTACTGGACCA+CGG 0.736198 7:-60828165 MsG0780039256.01.T01:CDS
AATATTGACCTCATTCACCG+TGG 0.768238 7:+60828148 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAGTATATGTTAGTT+TGG + Chr7:60827314-60827333 None:intergenic 15.0%
!! AAATACACAAAATTAAGAAA+TGG - Chr7:60828454-60828473 MsG0780039256.01.T01:intron 15.0%
!! ATATATGTTTGTTTACAATA+AGG + Chr7:60827115-60827134 None:intergenic 15.0%
!! TAATTTGATTAATATGTTCA+TGG - Chr7:60828850-60828869 MsG0780039256.01.T01:intron 15.0%
!! TTCATTCTTAATTAAAATAC+AGG - Chr7:60827346-60827365 MsG0780039256.01.T01:CDS 15.0%
!!! TATGACAATTTTCTAATATA+TGG - Chr7:60829761-60829780 MsG0780039256.01.T01:intron 15.0%
!!! TTGTCATTTATTTATGTATT+TGG - Chr7:60829619-60829638 MsG0780039256.01.T01:intron 15.0%
!! AAAAAAATAGACTTAAAGCA+TGG + Chr7:60828210-60828229 None:intergenic 20.0%
!! AAAAAATAGACTTAAAGCAT+GGG + Chr7:60828209-60828228 None:intergenic 20.0%
!! AAATTAGATTGTAAGTAAAG+TGG + Chr7:60828799-60828818 None:intergenic 20.0%
!! ATACATAAATAAATGACAAG+AGG + Chr7:60829618-60829637 None:intergenic 20.0%
!! ATTTCTAAACTTTGCATTAT+GGG - Chr7:60829058-60829077 MsG0780039256.01.T01:CDS 20.0%
!! GATATAATGAAAAAGAATGT+TGG - Chr7:60829247-60829266 MsG0780039256.01.T01:intron 20.0%
!! TATTACTTGAAGAATGATTA+TGG - Chr7:60829708-60829727 MsG0780039256.01.T01:intron 20.0%
!! TATTTCAATCTATGACAATA+TGG + Chr7:60828428-60828447 None:intergenic 20.0%
!! TCTAATATATTTCATCTTCT+AGG - Chr7:60828078-60828097 MsG0780039256.01.T01:CDS 20.0%
!! TGCATCTTATACATATAAAT+TGG - Chr7:60827538-60827557 MsG0780039256.01.T01:intron 20.0%
!!! ACATTCTTTTTCATTATATC+AGG + Chr7:60829247-60829266 None:intergenic 20.0%
!!! ATGCTTTAAGTCTATTTTTT+TGG - Chr7:60828209-60828228 MsG0780039256.01.T01:CDS 20.0%
!!! TGCTTTAAGTCTATTTTTTT+GGG - Chr7:60828210-60828229 MsG0780039256.01.T01:CDS 20.0%
!!! TTAAGAAATGGTTTTTATTG+TGG - Chr7:60828466-60828485 MsG0780039256.01.T01:intron 20.0%
! AAAAAAAGAGAGAACAAACT+TGG + Chr7:60826926-60826945 None:intergenic 25.0%
! AAATGATACATCAATAGATG+AGG - Chr7:60829555-60829574 MsG0780039256.01.T01:intron 25.0%
! AAGATATAATTGCTACTCAA+AGG - Chr7:60828964-60828983 MsG0780039256.01.T01:intron 25.0%
! AAGTACTTGCATAAATACAT+TGG - Chr7:60829911-60829930 MsG0780039256.01.T01:CDS 25.0%
! AATATTGTGAAGATGTTGAA+AGG + Chr7:60829805-60829824 None:intergenic 25.0%
! ACATGTTACATTACATCATT+GGG - Chr7:60828110-60828129 MsG0780039256.01.T01:CDS 25.0%
! AGAATCTAAGTTTGATTCTT+AGG + Chr7:60828325-60828344 None:intergenic 25.0%
! AGATATAATTGCTACTCAAA+GGG - Chr7:60828965-60828984 MsG0780039256.01.T01:intron 25.0%
! AGTACTTGCATAAATACATT+GGG - Chr7:60829912-60829931 MsG0780039256.01.T01:CDS 25.0%
! ATAACAAAAGAATGTATGTG+TGG - Chr7:60827509-60827528 MsG0780039256.01.T01:CDS 25.0%
! ATAGGACTAACTCTTAAAAT+AGG - Chr7:60829086-60829105 MsG0780039256.01.T01:CDS 25.0%
! ATTGTACAGGAAGAAATATA+AGG - Chr7:60828752-60828771 MsG0780039256.01.T01:CDS 25.0%
! CATTATACTTATGACTGTAA+TGG - Chr7:60827202-60827221 MsG0780039256.01.T01:intron 25.0%
! CATTTCTAAACTTTGCATTA+TGG - Chr7:60829057-60829076 MsG0780039256.01.T01:CDS 25.0%
! CCAATTTACATACATGAAAA+TGG - Chr7:60829738-60829757 MsG0780039256.01.T01:intron 25.0%
! CCATGATATTGAAAATCTAT+AGG + Chr7:60827666-60827685 None:intergenic 25.0%
! GTACAATGTGTTATATCATT+TGG + Chr7:60827003-60827022 None:intergenic 25.0%
! GTCAATATTTATGCAATGTT+TGG - Chr7:60828597-60828616 MsG0780039256.01.T01:CDS 25.0%
! TGAAAATTCTTGGTTGTAAT+CGG + Chr7:60829678-60829697 None:intergenic 25.0%
! TTGTAATATTGTAGTCCTTT+AGG + Chr7:60827976-60827995 None:intergenic 25.0%
!! CCATTTTCATGTATGTAAAT+TGG + Chr7:60829741-60829760 None:intergenic 25.0%
!! CCTATAGATTTTCAATATCA+TGG - Chr7:60827663-60827682 MsG0780039256.01.T01:intron 25.0%
!! GTTCTAAATCCATTAACATT+TGG - Chr7:60829214-60829233 MsG0780039256.01.T01:intron 25.0%
!! TTTTCAGACTATAATAAGTC+TGG - Chr7:60827060-60827079 MsG0780039256.01.T01:CDS 25.0%
ACTTATGACTGTAATGGTAT+TGG - Chr7:60827208-60827227 MsG0780039256.01.T01:intron 30.0%
ACTTGAAGTAACCAAGAAAT+TGG + Chr7:60828391-60828410 None:intergenic 30.0%
ATAAATGAACTGATAAGCCA+CGG - Chr7:60828003-60828022 MsG0780039256.01.T01:CDS 30.0%
ATCTAAGTTTGATTCTTAGG+TGG + Chr7:60828322-60828341 None:intergenic 30.0%
ATCTATATATGTATCCTTGC+AGG - Chr7:60828496-60828515 MsG0780039256.01.T01:CDS 30.0%
ATGTATTTACCAGATGGTAA+AGG - Chr7:60827940-60827959 MsG0780039256.01.T01:intron 30.0%
ATTTGATTCCTTTACTGTGA+AGG + Chr7:60829287-60829306 None:intergenic 30.0%
CACATGTTACATTACATCAT+TGG - Chr7:60828109-60828128 MsG0780039256.01.T01:CDS 30.0%
CTAAAAAGTCCCTACAAATA+AGG - Chr7:60829141-60829160 MsG0780039256.01.T01:CDS 30.0%
GGATAATCACCAAATGTTAA+TGG + Chr7:60829226-60829245 None:intergenic 30.0%
GTAAATACATAGGGATAAGA+TGG + Chr7:60827930-60827949 None:intergenic 30.0%
GTAATTCATCCTTGAATGAT+TGG - Chr7:60829879-60829898 MsG0780039256.01.T01:CDS 30.0%
GTTAGCAAAAAAATCGTGTA+TGG - Chr7:60828171-60828190 MsG0780039256.01.T01:CDS 30.0%
GTTTGCAACATGGATTTATT+GGG - Chr7:60828895-60828914 MsG0780039256.01.T01:intron 30.0%
TAACACCTCTTGAAAATTCT+TGG + Chr7:60829688-60829707 None:intergenic 30.0%
TACCATCTGGTAAATACATA+GGG + Chr7:60827939-60827958 None:intergenic 30.0%
TAGAGATTACATGCAAGATA+TGG - Chr7:60829396-60829415 MsG0780039256.01.T01:intron 30.0%
TGTTCAAACTATAAGCACTA+GGG + Chr7:60826854-60826873 None:intergenic 30.0%
TTACCATCTGGTAAATACAT+AGG + Chr7:60827940-60827959 None:intergenic 30.0%
TTGTTCAAACTATAAGCACT+AGG + Chr7:60826855-60826874 None:intergenic 30.0%
TTTGCATTATGGGATTTCAT+AGG - Chr7:60829068-60829087 MsG0780039256.01.T01:CDS 30.0%
! ACCATTTAAGACCAATTTCT+TGG - Chr7:60828377-60828396 MsG0780039256.01.T01:intron 30.0%
! ATTTTCAGCGAATATGTACA+AGG - Chr7:60827419-60827438 MsG0780039256.01.T01:CDS 30.0%
! GGGTTTAATCTTCTTACTTT+TGG - Chr7:60828915-60828934 MsG0780039256.01.T01:intron 30.0%
! GTACCTTATTTCATTAGCTA+TGG + Chr7:60829939-60829958 None:intergenic 30.0%
! TAATGGTATTGGAAGTTTGA+AGG - Chr7:60827219-60827238 MsG0780039256.01.T01:intron 30.0%
! TCAAAGGAACCTTATTTGTA+GGG + Chr7:60829153-60829172 None:intergenic 30.0%
! TCTGACATTTTCTAATTGCA+CGG - Chr7:60829452-60829471 MsG0780039256.01.T01:CDS 30.0%
! TTTTCAGCGAATATGTACAA+GGG - Chr7:60827420-60827439 MsG0780039256.01.T01:CDS 30.0%
!! AAATTCTTTGAAGCACACAT+CGG + Chr7:60828541-60828560 None:intergenic 30.0%
!! AACAATCTTTCTAAAGTGCA+GGG - Chr7:60828873-60828892 MsG0780039256.01.T01:intron 30.0%
!! ACCAAGAAATTGGTCTTAAA+TGG + Chr7:60828381-60828400 None:intergenic 30.0%
!! TACAACCAAGAATTTTCAAG+AGG - Chr7:60829680-60829699 MsG0780039256.01.T01:intron 30.0%
!! TCACATCATTTGTTATTGCA+GGG - Chr7:60829192-60829211 MsG0780039256.01.T01:intron 30.0%
AAACCAACCAGATGATCAAT+TGG + Chr7:60829650-60829669 None:intergenic 35.0%
AATATAGTCTTCACAAACCG+TGG + Chr7:60828023-60828042 None:intergenic 35.0%
AATCTCTATACTCCATGTTC+AGG + Chr7:60829384-60829403 None:intergenic 35.0%
ATATGATGAGCTGCCAAATA+TGG + Chr7:60828705-60828724 None:intergenic 35.0%
ATCCCTATGTATTTACCAGA+TGG - Chr7:60827934-60827953 MsG0780039256.01.T01:intron 35.0%
ATTTGCTTAGTGCGATGTTT+AGG + Chr7:60827584-60827603 None:intergenic 35.0%
CGATGGATATCACAAATACA+AGG - Chr7:60827461-60827480 MsG0780039256.01.T01:CDS 35.0%
GAAGATGTTGAAAGGATACA+TGG + Chr7:60829797-60829816 None:intergenic 35.0%
GATGTAATGTAACATGTGCT+TGG + Chr7:60828107-60828126 None:intergenic 35.0%
GATGTGAAATATTTCCTGCA+AGG + Chr7:60828513-60828532 None:intergenic 35.0%
GATGTGTGCTTCAAAGAATT+TGG - Chr7:60828540-60828559 MsG0780039256.01.T01:CDS 35.0%
GCAATGTTTGGCTATGATAT+TGG - Chr7:60828609-60828628 MsG0780039256.01.T01:CDS 35.0%
GGACCATAGCTAATGAAATA+AGG - Chr7:60829933-60829952 MsG0780039256.01.T01:CDS 35.0%
GGTTTAACCAATTGATCATC+TGG - Chr7:60829640-60829659 MsG0780039256.01.T01:intron 35.0%
GGTTTGCAACATGGATTTAT+TGG - Chr7:60828894-60828913 MsG0780039256.01.T01:intron 35.0%
GTATCATTTCAGATCTTACC+TGG + Chr7:60827701-60827720 None:intergenic 35.0%
GTTTGGCTATGATATTGGAA+TGG - Chr7:60828614-60828633 MsG0780039256.01.T01:CDS 35.0%
TAACCAATTGATCATCTGGT+TGG - Chr7:60829644-60829663 MsG0780039256.01.T01:intron 35.0%
TAGATGAGGTAACATAGTGA+AGG - Chr7:60829569-60829588 MsG0780039256.01.T01:intron 35.0%
TATTCATCCTCAAGTGATTG+TGG + Chr7:60828141-60828160 None:intergenic 35.0%
TCACTTGAGGATGAATATGA+AGG - Chr7:60828144-60828163 MsG0780039256.01.T01:CDS 35.0%
TCTTCACTAGTATTTGTCAG+TGG + Chr7:60828948-60828967 None:intergenic 35.0%
TGAGGATGAATATGAAGGAT+GGG - Chr7:60828149-60828168 MsG0780039256.01.T01:CDS 35.0%
TGTATTCGACTCACTTGATT+TGG - Chr7:60827827-60827846 MsG0780039256.01.T01:CDS 35.0%
TTCTTAGGTGGAACAATTCT+TGG + Chr7:60828310-60828329 None:intergenic 35.0%
TTCTTCAACTGAGCCATATT+TGG - Chr7:60828689-60828708 MsG0780039256.01.T01:intron 35.0%
TTGAGGATGAATATGAAGGA+TGG - Chr7:60828148-60828167 MsG0780039256.01.T01:CDS 35.0%
TTGTCATAGCTTAAGCTCAA+AGG + Chr7:60829169-60829188 None:intergenic 35.0%
! AAGAGCTCAATTGACTTCTT+AGG - Chr7:60829313-60829332 MsG0780039256.01.T01:CDS 35.0%
! CATTTTACATCTGTCTTCGA+GGG - Chr7:60827725-60827744 MsG0780039256.01.T01:intron 35.0%
! CTCAAAGGAACCTTATTTGT+AGG + Chr7:60829154-60829173 None:intergenic 35.0%
! CTTAAAGCATGGGAAAGTTT+TGG + Chr7:60828199-60828218 None:intergenic 35.0%
!! ATCCTTGAATGATTGGTCTA+GGG - Chr7:60829886-60829905 MsG0780039256.01.T01:CDS 35.0%
!! CTCACATCATTTGTTATTGC+AGG - Chr7:60829191-60829210 MsG0780039256.01.T01:intron 35.0%
!! CTTGATTTGGTTTAAGTGCA+TGG - Chr7:60827840-60827859 MsG0780039256.01.T01:CDS 35.0%
!! GAACAATCTTTCTAAAGTGC+AGG - Chr7:60828872-60828891 MsG0780039256.01.T01:intron 35.0%
!! TGTAGTCCTTTAGGATTGAT+GGG + Chr7:60827967-60827986 None:intergenic 35.0%
!! TTGTAGTCCTTTAGGATTGA+TGG + Chr7:60827968-60827987 None:intergenic 35.0%
AAAGGACCCATCAATCCTAA+AGG - Chr7:60827958-60827977 MsG0780039256.01.T01:intron 40.0%
AATATTGACCTCATTCACCG+TGG + Chr7:60828586-60828605 None:intergenic 40.0%
ACACCAAACACAAAGTCAGA+AGG + Chr7:60826888-60826907 None:intergenic 40.0%
ACTTCCTTCCTTCACAGTAA+AGG - Chr7:60829276-60829295 MsG0780039256.01.T01:CDS 40.0%
ATTGCACGGCCAATTCTTTA+CGG - Chr7:60829466-60829485 MsG0780039256.01.T01:CDS 40.0%
CACCAAACACAAAGTCAGAA+GGG + Chr7:60826887-60826906 None:intergenic 40.0%
CCTCGAAGACAGATGTAAAA+TGG + Chr7:60827727-60827746 None:intergenic 40.0%
GACAATACCATTTCCACCAT+GGG + Chr7:60827292-60827311 None:intergenic 40.0%
GATTCCTTTACTGTGAAGGA+AGG + Chr7:60829283-60829302 None:intergenic 40.0%
GTTAGAGCTCCGTAAAGAAT+TGG + Chr7:60829478-60829497 None:intergenic 40.0%
TCTTCGAGGGAATTTGAACT+CGG - Chr7:60827738-60827757 MsG0780039256.01.T01:intron 40.0%
TTACATGCAAGATATGGCAG+TGG - Chr7:60829402-60829421 MsG0780039256.01.T01:intron 40.0%
TTCCCTTCTGACTTTGTGTT+TGG - Chr7:60826882-60826901 MsG0780039256.01.T01:intron 40.0%
! CCATTTTACATCTGTCTTCG+AGG - Chr7:60827724-60827743 MsG0780039256.01.T01:intron 40.0%
!! ACGGAGCTCTAACATTTTGA+AGG - Chr7:60829485-60829504 MsG0780039256.01.T01:CDS 40.0%
!! AGTCTTCGAGTTCATTTTGC+AGG - Chr7:60829842-60829861 MsG0780039256.01.T01:CDS 40.0%
!! CATCCTTGAATGATTGGTCT+AGG - Chr7:60829885-60829904 MsG0780039256.01.T01:CDS 40.0%
!! CTTTCTAGCTAACTGCTCAA+GGG - Chr7:60828662-60828681 MsG0780039256.01.T01:intron 40.0%
!! TTTCTAGCTAACTGCTCAAG+GGG - Chr7:60828663-60828682 MsG0780039256.01.T01:intron 40.0%
!!! TTTTTTGGGTGTTAACCCTC+CGG - Chr7:60828224-60828243 MsG0780039256.01.T01:intron 40.0%
AAAGTGCAGGGTTTGCAACA+TGG - Chr7:60828885-60828904 MsG0780039256.01.T01:intron 45.0%
ACTGTGAAGGAAGGAAGTCT+TGG + Chr7:60829274-60829293 None:intergenic 45.0%
ATAGGCATCTAAGCCCATGT+TGG + Chr7:60827648-60827667 None:intergenic 45.0%
ATATGGGATACCTTTGCCCA+TGG - Chr7:60827273-60827292 MsG0780039256.01.T01:intron 45.0%
ATGGCAGGAAACCAAGCATA+TGG - Chr7:60827256-60827275 MsG0780039256.01.T01:intron 45.0%
ATGGTTAATGAGCTCCACCA+CGG + Chr7:60828362-60828381 None:intergenic 45.0%
CACCCTAGACCAATCATTCA+AGG + Chr7:60829891-60829910 None:intergenic 45.0%
CCTTGAGCAGTTAGCTAGAA+AGG + Chr7:60828664-60828683 None:intergenic 45.0%
CTTCTGCTGCAAGATTGTAC+AGG - Chr7:60828739-60828758 MsG0780039256.01.T01:CDS 45.0%
GAGCAGTTAGCTAGAAAGGA+AGG + Chr7:60828660-60828679 None:intergenic 45.0%
GCGAATATGTACAAGGGTGA+CGG - Chr7:60827426-60827445 MsG0780039256.01.T01:CDS 45.0%
GGACAATACCATTTCCACCA+TGG + Chr7:60827293-60827312 None:intergenic 45.0%
GGATCTACCACAATCACTTG+AGG - Chr7:60828131-60828150 MsG0780039256.01.T01:CDS 45.0%
TGGCAGGAAACCAAGCATAT+GGG - Chr7:60827257-60827276 MsG0780039256.01.T01:intron 45.0%
TTGGCGATCGAGTTAAGTAC+TGG - Chr7:60828559-60828578 MsG0780039256.01.T01:CDS 45.0%
! GAAGGTGCAGCAAATCAAGA+TGG - Chr7:60827237-60827256 MsG0780039256.01.T01:intron 45.0%
! GGCTCTGGTAATTTGGAGTT+CGG - Chr7:60828262-60828281 MsG0780039256.01.T01:intron 45.0%
! TGTTAACCCTCCGGTTCTAA+GGG - Chr7:60828233-60828252 MsG0780039256.01.T01:intron 45.0%
! TTGATGGGTCCTTTACCATC+TGG + Chr7:60827952-60827971 None:intergenic 45.0%
!! CCTTTCTAGCTAACTGCTCA+AGG - Chr7:60828661-60828680 MsG0780039256.01.T01:intron 45.0%
!! GCAAAGGTATCCCATATGCT+TGG + Chr7:60827270-60827289 None:intergenic 45.0%
!! TCGAGTTAAGTACTGGACCA+CGG - Chr7:60828566-60828585 MsG0780039256.01.T01:CDS 45.0%
AAGGAAGGAGAACACCTCTG+AGG + Chr7:60828645-60828664 None:intergenic 50.0%
AAGGGCCCAAGACTTCATGA+TGG - Chr7:60828983-60829002 MsG0780039256.01.T01:intron 50.0%
ACAAGACCTCGATTTCCTGC+AGG - Chr7:60827604-60827623 MsG0780039256.01.T01:intron 50.0%
ACCACCCCATCATGAAGTCT+TGG + Chr7:60828992-60829011 None:intergenic 50.0%
ACCATTTCCACCATGGGCAA+AGG + Chr7:60827286-60827305 None:intergenic 50.0%
AGGGCCCAAGACTTCATGAT+GGG - Chr7:60828984-60829003 MsG0780039256.01.T01:intron 50.0%
CAATCCTGCAAGCCTGAACA+TGG - Chr7:60829369-60829388 MsG0780039256.01.T01:intron 50.0%
CATCTTCCTGCAGGAAATCG+AGG + Chr7:60827613-60827632 None:intergenic 50.0%
CCACCCCATCATGAAGTCTT+GGG + Chr7:60828991-60829010 None:intergenic 50.0%
GACGGAGATATTGCATGCGA+TGG - Chr7:60827444-60827463 MsG0780039256.01.T01:CDS 50.0%
GCAGGAAGATGTCGAACTCA+TGG - Chr7:60827622-60827641 MsG0780039256.01.T01:intron 50.0%
GTCGAACTCATGGCCAACAT+GGG - Chr7:60827632-60827651 MsG0780039256.01.T01:intron 50.0%
GTGCAGCAAATCAAGATGGC+AGG - Chr7:60827241-60827260 MsG0780039256.01.T01:intron 50.0%
GTGTTAACCCTCCGGTTCTA+AGG - Chr7:60828232-60828251 MsG0780039256.01.T01:intron 50.0%
TACTCCATGTTCAGGCTTGC+AGG + Chr7:60829376-60829395 None:intergenic 50.0%
TCATGGTCGCGACTTATTCC+AGG - Chr7:60827680-60827699 MsG0780039256.01.T01:intron 50.0%
TCTCCTGAACAATTCGTCCG+TGG - Chr7:60828342-60828361 MsG0780039256.01.T01:intron 50.0%
TGAGTTCGACATCTTCCTGC+AGG + Chr7:60827622-60827641 None:intergenic 50.0%
TGTCGAACTCATGGCCAACA+TGG - Chr7:60827631-60827650 MsG0780039256.01.T01:intron 50.0%
! ACCTTTGCCCATGGTGGAAA+TGG - Chr7:60827282-60827301 MsG0780039256.01.T01:intron 50.0%
! GGAAAGGGGCTCTGGTAATT+TGG - Chr7:60828255-60828274 MsG0780039256.01.T01:intron 50.0%
!! GTTAACCCTCCGGTTCTAAG+GGG - Chr7:60828234-60828253 MsG0780039256.01.T01:intron 50.0%
AGCCCCTTTCCCCTTAGAAC+CGG + Chr7:60828246-60828265 None:intergenic 55.0%
CCACCACGGACGAATTGTTC+AGG + Chr7:60828348-60828367 None:intergenic 55.0%
CCTGAACAATTCGTCCGTGG+TGG - Chr7:60828345-60828364 MsG0780039256.01.T01:intron 55.0%
CCTTTCCCCTTAGAACCGGA+GGG + Chr7:60828242-60828261 None:intergenic 55.0%
GGGCCCAAGACTTCATGATG+GGG - Chr7:60828985-60829004 MsG0780039256.01.T01:intron 55.0%
GTACTGGACCACGGTGAATG+AGG - Chr7:60828575-60828594 MsG0780039256.01.T01:CDS 55.0%
TGGGATACCTTTGCCCATGG+TGG - Chr7:60827276-60827295 MsG0780039256.01.T01:intron 55.0%
! CCCAAGACTTCATGATGGGG+TGG - Chr7:60828988-60829007 MsG0780039256.01.T01:intron 55.0%
! GAAGGAGAACACCTCTGAGG+CGG + Chr7:60828642-60828661 None:intergenic 55.0%
! TTCTAAGGGGAAAGGGGCTC+TGG - Chr7:60828247-60828266 MsG0780039256.01.T01:intron 55.0%
!! CCTCCGGTTCTAAGGGGAAA+GGG - Chr7:60828240-60828259 MsG0780039256.01.T01:intron 55.0%
!! CTCCGGTTCTAAGGGGAAAG+GGG - Chr7:60828241-60828260 MsG0780039256.01.T01:intron 55.0%
CCCTTTCCCCTTAGAACCGG+AGG + Chr7:60828243-60828262 None:intergenic 60.0%
TTGGAATGGCACCGCCTCAG+AGG - Chr7:60828628-60828647 MsG0780039256.01.T01:CDS 60.0%
!! CCCTCCGGTTCTAAGGGGAA+AGG - Chr7:60828239-60828258 MsG0780039256.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 60826771 60829982 60826771 ID=MsG0780039256.01;Name=MsG0780039256.01
Chr7 mRNA 60826771 60829982 60826771 ID=MsG0780039256.01.T01;Parent=MsG0780039256.01;Name=MsG0780039256.01.T01;_AED=0.40;_eAED=0.46;_QI=0|0.63|0.5|1|0.90|0.83|12|0|510
Chr7 exon 60829823 60829982 60829823 ID=MsG0780039256.01.T01:exon:7437;Parent=MsG0780039256.01.T01
Chr7 exon 60829450 60829506 60829450 ID=MsG0780039256.01.T01:exon:7436;Parent=MsG0780039256.01.T01
Chr7 exon 60829271 60829385 60829271 ID=MsG0780039256.01.T01:exon:7435;Parent=MsG0780039256.01.T01
Chr7 exon 60829052 60829179 60829052 ID=MsG0780039256.01.T01:exon:7434;Parent=MsG0780039256.01.T01
Chr7 exon 60828729 60828800 60828729 ID=MsG0780039256.01.T01:exon:7433;Parent=MsG0780039256.01.T01
Chr7 exon 60828485 60828653 60828485 ID=MsG0780039256.01.T01:exon:7432;Parent=MsG0780039256.01.T01
Chr7 exon 60827980 60828235 60827980 ID=MsG0780039256.01.T01:exon:7431;Parent=MsG0780039256.01.T01
Chr7 exon 60827744 60827859 60827744 ID=MsG0780039256.01.T01:exon:7430;Parent=MsG0780039256.01.T01
Chr7 exon 60827320 60827540 60827320 ID=MsG0780039256.01.T01:exon:7429;Parent=MsG0780039256.01.T01
Chr7 exon 60827177 60827208 60827177 ID=MsG0780039256.01.T01:exon:7428;Parent=MsG0780039256.01.T01
Chr7 exon 60826994 60827081 60826994 ID=MsG0780039256.01.T01:exon:7427;Parent=MsG0780039256.01.T01
Chr7 exon 60826771 60826889 60826771 ID=MsG0780039256.01.T01:exon:7426;Parent=MsG0780039256.01.T01
Chr7 CDS 60829823 60829982 60829823 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60829450 60829506 60829450 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60829271 60829385 60829271 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60829052 60829179 60829052 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60828729 60828800 60828729 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60828485 60828653 60828485 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60827980 60828235 60827980 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60827744 60827859 60827744 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60827320 60827540 60827320 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60827177 60827208 60827177 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60826994 60827081 60826994 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Chr7 CDS 60826771 60826889 60826771 ID=MsG0780039256.01.T01:cds;Parent=MsG0780039256.01.T01
Gene Sequence

>MsG0780039256.01.T01

ATGAGTATGGCTTTGATCTTGAAGAATTATTCTTTGACAGAATTATTAACTGCTGCTGCAGTGTTAGTAGTAATCATTTTCCCTAGTGCTTATAGTTTGAACAAAGATGACTTCCCTTCTGACTTTGTGTTTGGTGTATCAACTTCAGCTTACCAAGTTTCAAATCAAGATGGCAGGAAACCAAGCATATGGGATACCTTTGCCCATGGTGGAAATGGTTTTCTTTATTCTGCTGTTGTGTTGAAACAAAAGTTTATAGTTAAAGTATATTTTCAGCGAATATGTACAAGGGTGACGGAGATATTGCATGCGATGGATATCACAAATACAAGTTCATCACCTAAACATCGCACTAAGCAAATACAAGACCTCGATTTCCTGCAGGAAGATGTCGAACTCATGGCCAACATGGGCTTAGATGCCTATAGATTTTCAATATCATGGTCGCGACTTATTCCAGATGGTAAAGGACCCATCAATCCTAAAGGACTACAATATTACAACAATCTCATAAATGAACTGATAAGCCACGGAATCCAAGCACATGTTACATTACATCATTGGGATCTACCACAATCACTTGAGGATGAATATGAAGGATGGGTTAGCAAAAAAATCGTGTATGGTTCCAAAACTTTCCCATGCTTTAAGTCTATTTTTTTGGGTGTTAACCCTCCGGTTCTAAGGGGAAAGGGGCTCTGGAAATATTTCACATCATATGCCGATGTGTGCTTCAAAGAATTTGGCGATCGAGTTAAGTACTGGACCACGGTGAATGAGGTCAATATTTATGCAATGTTTGGCTATGATATTGGAATGGCACCGCCTCAGAGGTGTTCTCCTTCCTTTCTAGCTAACTGCTCAAGGGGAAATTCTTCAACTGAGCCATATTTGGCAGCTCATCATATGTTGTTAGCACATGCTTCTGCTGCAAGATTGTACAGGAAGAAATATAAGGGTTTGCAACATGGATTTATTGGGTTTAATCTTCTTACTTTTGGTTTTGTTCCACTGACAAATACTAGTGAAGATATAATTGCTACTCAAAGGGCCCAAGACTTCATGATGGGGTGGGTTCTAAATCCATTAACATTTGGTGATTATCCTGATATAATGAAAAAGAATGTTGGACCAAGACTTCCTTCCTTCACAGTAAAGGAATCAAATCTGATCAAGAGCTCAATTGACTTCTTAGGAATAAACTTTTACAACTTAATATATGTTCAGAACAATCCTGCAAGCCTGAACATGGAGTATAGAGATTACATGCAAGATATGGCAGTGGAAATTACAATCATGATAGAAAATGATACATCAATAGATGAGTTTCCGATTACAACCAAGAATTTTCAAGAGGTGTTATATTACTTGAAGAATGATTATGGAAATTTTCCAATTTACATACATGAAAATGGCTACAGAACACTTCGTAATTCATCCTTGAATGATTGGTCTAGGGTGAAGTACTTGCATAAATACATTGGGACCATAGCTAATGAAATAAGGTACTTCTACTTTGATTTTCAAATATAA

Protein sequence

>MsG0780039256.01.T01

MSMALILKNYSLTELLTAAAVLVVIIFPSAYSLNKDDFPSDFVFGVSTSAYQVSNQDGRKPSIWDTFAHGGNGFLYSAVVLKQKFIVKVYFQRICTRVTEILHAMDITNTSSSPKHRTKQIQDLDFLQEDVELMANMGLDAYRFSISWSRLIPDGKGPINPKGLQYYNNLINELISHGIQAHVTLHHWDLPQSLEDEYEGWVSKKIVYGSKTFPCFKSIFLGVNPPVLRGKGLWKYFTSYADVCFKEFGDRVKYWTTVNEVNIYAMFGYDIGMAPPQRCSPSFLANCSRGNSSTEPYLAAHHMLLAHASAARLYRKKYKGLQHGFIGFNLLTFGFVPLTNTSEDIIATQRAQDFMMGWVLNPLTFGDYPDIMKKNVGPRLPSFTVKESNLIKSSIDFLGINFYNLIYVQNNPASLNMEYRDYMQDMAVEITIMIENDTSIDEFPITTKNFQEVLYYLKNDYGNFPIYIHENGYRTLRNSSLNDWSRVKYLHKYIGTIANEIRYFYFDFQI*