AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039272.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039272.01.T01 MTR_7g069430 83.072 319 1 2 1 270 1 315 0.0 521
MsG0780039272.01.T01 MTR_1g012990 82.445 319 5 2 1 270 1 317 0.0 520
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039272.01.T01 AT3G15460 66.978 321 48 5 1 270 1 314 2.36e-145 410
MsG0780039272.01.T01 AT1G52930 65.000 320 60 3 1 270 1 318 2.60e-139 395

Find 82 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATATTTATATTCTTATT+AGG 0.199199 7:-61115095 MsG0780039272.01.T01:three_prime_UTR
TATATGTTCTATTGGAGATA+TGG 0.252408 7:-61115241 MsG0780039272.01.T01:three_prime_UTR
CGATTGTTGATGACCATATA+TGG 0.264455 7:-61116764 MsG0780039272.01.T01:CDS
GCTCTAGGCGTATTGTTTAC+AGG 0.279178 7:-61118832 MsG0780039272.01.T01:intron
AATTGCTTTATATGTTCTAT+TGG 0.283997 7:-61115249 MsG0780039272.01.T01:three_prime_UTR
AAAATATTCGGTGGCAGTTT+TGG 0.285272 7:-61115673 MsG0780039272.01.T01:CDS
ACCATTTCATGATGGATATA+AGG 0.298513 7:+61115320 None:intergenic
GTTGAAGGAGATGCTGTTAC+AGG 0.303915 7:-61117312 MsG0780039272.01.T01:intron
ATGGAGGAATTGAAGCTTAC+TGG 0.304877 7:-61117407 MsG0780039272.01.T01:CDS
GAGACCAGTGAGGACCCTTT+TGG 0.316595 7:-61118951 MsG0780039272.01.T01:CDS
GGTAATTTCGGAACCATATA+TGG 0.326418 7:+61116751 None:intergenic
ATGGTGCTTCACCTGTATTC+AGG 0.342543 7:-61118880 MsG0780039272.01.T01:CDS
TTGAATCCGATTAAAATATT+CGG 0.352118 7:-61115685 MsG0780039272.01.T01:CDS
TTCTCTTTGTTCCTGAATAC+AGG 0.355373 7:+61118869 None:intergenic
AAACACAAACCTGGTAATTT+CGG 0.365107 7:+61116739 None:intergenic
TTACGGAGCTGCGACGATTT+CGG 0.366530 7:+61120007 None:intergenic
CTTACTGGGAATCACCTAAA+AGG 0.369692 7:-61117392 MsG0780039272.01.T01:CDS
ATATGTTCTATTGGAGATAT+GGG 0.371110 7:-61115240 MsG0780039272.01.T01:three_prime_UTR
GAAATTGAGGCTAAGGATAA+TGG 0.372435 7:-61118899 MsG0780039272.01.T01:CDS
TTTCTCTTCCCCATGTGGTT+TGG 0.383368 7:+61119031 None:intergenic
AGGGTCCTCACTGGTCTCTC+TGG 0.383639 7:+61118956 None:intergenic
AATTTAACAGACGGGCCGTT+GGG 0.387269 7:+61117631 None:intergenic
AGCTGAGGCCGTGCCCAAAA+AGG 0.387341 7:-61118990 MsG0780039272.01.T01:CDS
ACCTTATATCCATCATGAAA+TGG 0.398687 7:-61115321 MsG0780039272.01.T01:three_prime_UTR
AGCTTTGCAGAAGAAGAAAA+AGG 0.403828 7:-61115496 MsG0780039272.01.T01:CDS
CAGGAACAAAGAGAAAGTTT+TGG 0.404050 7:-61118861 MsG0780039272.01.T01:CDS
GGCTGGAACGTTTGCAAAGA+AGG 0.416450 7:-61115475 MsG0780039272.01.T01:CDS
ATATATAGTGCAGGTTCGGC+AGG 0.417853 7:+61115122 None:intergenic
TTAGCCTTTCTGTGGTCCTT+CGG 0.446280 7:+61116816 None:intergenic
TCTTATCCTTCCATCCCAAA+AGG 0.448553 7:+61118936 None:intergenic
ATCATAGTATCATAGTTTGA+TGG 0.462877 7:+61115195 None:intergenic
AGGCAAAAGATCTTTATCTC+TGG 0.470351 7:-61117666 MsG0780039272.01.T01:CDS
CACATATCAGCAAACTCATC+AGG 0.477546 7:+61115402 None:intergenic
TGATAAAATGACATTGATTG+AGG 0.479641 7:-61115809 MsG0780039272.01.T01:intron
TGAGAATGAAATTGAGGCTA+AGG 0.482199 7:-61118906 MsG0780039272.01.T01:CDS
TTTGATGAAAATGTCAAAAG+AGG 0.486922 7:+61117362 None:intergenic
CTCATCAGGCTCAAGAGGAT+TGG 0.499362 7:+61115416 None:intergenic
CCACCTGCTTCATCTTCAAT+CGG 0.509210 7:-61120039 MsG0780039272.01.T01:five_prime_UTR
AAATTTAACAGACGGGCCGT+TGG 0.517299 7:+61117630 None:intergenic
TATATGGTTCCGAAATTACC+AGG 0.519157 7:-61116748 MsG0780039272.01.T01:intron
TGGAGGAATTGAAGCTTACT+GGG 0.524362 7:-61117406 MsG0780039272.01.T01:CDS
TGCATACTGGAAATTGTTGA+AGG 0.528673 7:-61117327 MsG0780039272.01.T01:CDS
CTTATCCTTCCATCCCAAAA+GGG 0.530204 7:+61118937 None:intergenic
TCATAGTATCATAGTTTGAT+GGG 0.532574 7:+61115196 None:intergenic
GAAGAGAAAGCGAAGTGAAA+AGG 0.534401 7:-61119017 MsG0780039272.01.T01:CDS
GTGGATTCTCATATAAAGTC+GGG 0.536289 7:+61115647 None:intergenic
TGATAATGAGAATGAAATTG+AGG 0.547214 7:-61118912 MsG0780039272.01.T01:CDS
GCTGCGACGATTTCGGTCGA+AGG 0.549108 7:+61120014 None:intergenic
CATCCCAAAAGGGTCCTCAC+TGG 0.551306 7:+61118947 None:intergenic
TTCGCTTTCTCTTCCCCATG+TGG 0.558777 7:+61119026 None:intergenic
ACTCTACGTGTCGCCAAACC+AGG 0.562370 7:-61115626 MsG0780039272.01.T01:intron
TAGTGCAGGTTCGGCAGGGT+AGG 0.565176 7:+61115127 None:intergenic
AAAAGATCTTTATCTCTGGA+TGG 0.569362 7:-61117662 MsG0780039272.01.T01:CDS
GCAAACTCATCAGGCTCAAG+AGG 0.570989 7:+61115411 None:intergenic
GGAAAGGCTTAGCCTTTCTG+TGG 0.574310 7:+61116808 None:intergenic
TACTTGTTTAGGTTGGTCCA+CGG 0.580063 7:-61115714 MsG0780039272.01.T01:intron
ATTTAACAGACGGGCCGTTG+GGG 0.581078 7:+61117632 None:intergenic
AGTGGATTCTCATATAAAGT+CGG 0.583639 7:+61115646 None:intergenic
TGGTTTGGCGACACGTAGAG+TGG 0.584267 7:+61115628 None:intergenic
GCGCCGATTGAAGATGAAGC+AGG 0.588018 7:+61120036 None:intergenic
AATCCGATTAAAATATTCGG+TGG 0.588458 7:-61115682 MsG0780039272.01.T01:CDS
AGATTTGTAGCCAAACCACA+TGG 0.588735 7:-61119041 MsG0780039272.01.T01:exon
AAGGAGGAAAATGCATGAGA+TGG 0.589573 7:-61115439 MsG0780039272.01.T01:CDS
CTGATGAGTTTGCTGATATG+TGG 0.601778 7:-61115401 MsG0780039272.01.T01:CDS
AACACCGAAGGACCACAGAA+AGG 0.602217 7:-61116820 MsG0780039272.01.T01:CDS
AGAAGGTCAAAGCAAAGACA+AGG 0.616949 7:-61115458 MsG0780039272.01.T01:CDS
TGGATGGCAAAATGCCCCAA+CGG 0.618112 7:-61117646 MsG0780039272.01.T01:CDS
AATTTGTCTGACTCATTGTG+AGG 0.622655 7:+61115847 None:intergenic
CCGATTGAAGATGAAGCAGG+TGG 0.624071 7:+61120039 None:intergenic
ATCGGATTCAAGCAAAACCG+TGG 0.627328 7:+61115697 None:intergenic
AAGTGAAAAGGCTGAAGCTG+AGG 0.628246 7:-61119005 MsG0780039272.01.T01:CDS
CTTTCCAGTGCACACAATGG+AGG 0.635931 7:-61117423 MsG0780039272.01.T01:intron
CTGCTTTCCAGTGCACACAA+TGG 0.638507 7:-61117426 MsG0780039272.01.T01:intron
AGGTCAAAGCAAAGACAAGG+AGG 0.640567 7:-61115455 MsG0780039272.01.T01:CDS
CGATTGAAGATGAAGCAGGT+GGG 0.646865 7:+61120040 None:intergenic
ATTTGTAGCCAAACCACATG+GGG 0.647471 7:-61119039 MsG0780039272.01.T01:exon
TATATAGTGCAGGTTCGGCA+GGG 0.647478 7:+61115123 None:intergenic
GATTTGTAGCCAAACCACAT+GGG 0.655313 7:-61119040 MsG0780039272.01.T01:exon
TGGCAGTCCGTTCTCTATAG+CGG 0.664448 7:-61115287 MsG0780039272.01.T01:three_prime_UTR
CCAGATATTTGAAACACCGA+AGG 0.677611 7:-61116832 MsG0780039272.01.T01:intron
TTGCTCCAGAGAGACCAGTG+AGG 0.749614 7:-61118961 MsG0780039272.01.T01:CDS
GAGTCAGACAAATTACCCCG+TGG 0.753852 7:-61115838 MsG0780039272.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAAAAAAAAATTT+AGG - Chr7:61118602-61118621 MsG0780039272.01.T01:intron 0.0%
!! AAAAAGTAACATAAATATTT+GGG - Chr7:61118568-61118587 MsG0780039272.01.T01:intron 10.0%
!! AAAATTAAATTAATGTCAAA+TGG - Chr7:61114842-61114861 MsG0780039272.01.T01:intron 10.0%
!! AAATTAACAATTTAAGAAAA+AGG - Chr7:61119887-61119906 MsG0780039272.01.T01:intron 10.0%
!! AATTAACAATTTAAGAAAAA+GGG - Chr7:61119888-61119907 MsG0780039272.01.T01:intron 10.0%
!!! TAAATATCAACATTTTTTTA+GGG + Chr7:61115459-61115478 None:intergenic 10.0%
!!! TTTTTAATGTTTCTTATATT+TGG + Chr7:61119608-61119627 None:intergenic 10.0%
!! ATTATTTAAATTTATCTACG+GGG + Chr7:61114998-61115017 None:intergenic 15.0%
!! ATTGATCATAAACTTATTAT+AGG - Chr7:61115144-61115163 MsG0780039272.01.T01:three_prime_UTR 15.0%
!! CATTATTTAAATTTATCTAC+GGG + Chr7:61114999-61115018 None:intergenic 15.0%
!! GAAAAAGTAACATAAATATT+TGG - Chr7:61118567-61118586 MsG0780039272.01.T01:intron 15.0%
!! GCATTATTTAAATTTATCTA+CGG + Chr7:61115000-61115019 None:intergenic 15.0%
!! GCTATATTTATATTCTTATT+AGG - Chr7:61118391-61118410 MsG0780039272.01.T01:intron 15.0%
!! TTATGTATAAGCTATTTATA+GGG - Chr7:61114005-61114024 MsG0780039272.01.T01:intron 15.0%
!! TTGCAAAAGATTTAAATAAT+TGG - Chr7:61116774-61116793 MsG0780039272.01.T01:CDS 15.0%
!!! AAATTTATTTTGTAGCTAAA+TGG - Chr7:61113918-61113937 MsG0780039272.01.T01:intron 15.0%
!!! AACTAAAATTTTCATCAATT+TGG + Chr7:61119086-61119105 None:intergenic 15.0%
!!! ATTTATGTTACTTTTTCAAA+AGG + Chr7:61118564-61118583 None:intergenic 15.0%
!!! CTAAATATCAACATTTTTTT+AGG + Chr7:61115460-61115479 None:intergenic 15.0%
!!! CTACACTTTAAAATTTAAAA+TGG + Chr7:61115590-61115609 None:intergenic 15.0%
!!! TAAACATTTTTTATGACATA+AGG - Chr7:61115318-61115337 MsG0780039272.01.T01:three_prime_UTR 15.0%
!!! TCATAATATCATATTTCTAT+TGG + Chr7:61117124-61117143 None:intergenic 15.0%
!!! TTCTTAAATTATTGTTTTTC+TGG - Chr7:61118327-61118346 MsG0780039272.01.T01:intron 15.0%
!!! TTTAAAGGTTCAAATTTTAA+AGG + Chr7:61118791-61118810 None:intergenic 15.0%
!!! TTTATGTTACTTTTTCAAAA+GGG + Chr7:61118563-61118582 None:intergenic 15.0%
!!! TTTGCTTATTTTATAATGTA+TGG - Chr7:61117443-61117462 MsG0780039272.01.T01:intron 15.0%
!! AAATACATAGAAAACCAATT+TGG + Chr7:61115640-61115659 None:intergenic 20.0%
!! AAGTCTATAAATGTTATGTT+TGG - Chr7:61116414-61116433 MsG0780039272.01.T01:intron 20.0%
!! AATACATAGAAAACCAATTT+GGG + Chr7:61115639-61115658 None:intergenic 20.0%
!! AATACTATATAATCATAGCA+AGG + Chr7:61115944-61115963 None:intergenic 20.0%
!! AATGTTATATTGAATCAAAG+TGG - Chr7:61113877-61113896 MsG0780039272.01.T01:intron 20.0%
!! AATTGATAGAAAACGAAAAA+CGG + Chr7:61113544-61113563 None:intergenic 20.0%
!! AATTGCTTTATATGTTCTAT+TGG - Chr7:61118237-61118256 MsG0780039272.01.T01:intron 20.0%
!! ACAATTTCTTATTCAATGTA+TGG - Chr7:61119219-61119238 MsG0780039272.01.T01:intron 20.0%
!! CCTATATATAAAATAACACT+TGG - Chr7:61118627-61118646 MsG0780039272.01.T01:intron 20.0%
!! CTAACTAAAAATTTAACAGA+CGG + Chr7:61115867-61115886 None:intergenic 20.0%
!! CTATGATTATATAGTATTCT+AGG - Chr7:61115946-61115965 MsG0780039272.01.T01:intron 20.0%
!! GATTAATGAAAAAAATAAGC+TGG + Chr7:61118497-61118516 None:intergenic 20.0%
!! GTTATGTATAAGCTATTTAT+AGG - Chr7:61114004-61114023 MsG0780039272.01.T01:intron 20.0%
!! TAAAAGAGAAACTAGTAAAA+TGG + Chr7:61116034-61116053 None:intergenic 20.0%
!! TAACTAAAAATTTAACAGAC+GGG + Chr7:61115866-61115885 None:intergenic 20.0%
!! TACTGAAAATAACTACATAT+TGG - Chr7:61117931-61117950 MsG0780039272.01.T01:intron 20.0%
!! TCTATTGTCATATATCTATA+TGG - Chr7:61116356-61116375 MsG0780039272.01.T01:intron 20.0%
!! TGATAATTTAAACAAGATAG+AGG - Chr7:61117472-61117491 MsG0780039272.01.T01:intron 20.0%
!! TTGAATCCGATTAAAATATT+CGG - Chr7:61117801-61117820 MsG0780039272.01.T01:intron 20.0%
!! TTTATAAAGTCCCAAAATTT+AGG + Chr7:61119052-61119071 None:intergenic 20.0%
!!! AAGAAATAAGTAGCATTTTA+TGG + Chr7:61118963-61118982 None:intergenic 20.0%
!!! AATTTTAATTGTGTAGAATG+CGG - Chr7:61116454-61116473 MsG0780039272.01.T01:intron 20.0%
!!! ACTTTTGATCTGTTAATTAA+TGG - Chr7:61119793-61119812 MsG0780039272.01.T01:intron 20.0%
!!! AGTAAATGATTGTTTTACTA+TGG - Chr7:61117203-61117222 MsG0780039272.01.T01:intron 20.0%
!!! ATAAACACTAGCTTAATTTA+GGG - Chr7:61113611-61113630 MsG0780039272.01.T01:intron 20.0%
!!! CAGTTTACTTATTTTAAATC+TGG - Chr7:61115663-61115682 MsG0780039272.01.T01:CDS 20.0%
!!! CCAAGTGTTATTTTATATAT+AGG + Chr7:61118630-61118649 None:intergenic 20.0%
!!! GTTTAAACTTTAAAATCTGT+TGG - Chr7:61116831-61116850 MsG0780039272.01.T01:CDS 20.0%
!!! TAAGTTTTGACTTTTATCTT+CGG - Chr7:61120059-61120078 MsG0780039272.01.T01:five_prime_UTR 20.0%
!!! TATAAACACTAGCTTAATTT+AGG - Chr7:61113610-61113629 MsG0780039272.01.T01:intron 20.0%
!!! TATAATTATGCCAATTGTTT+TGG - Chr7:61116908-61116927 MsG0780039272.01.T01:intron 20.0%
!!! TGATATAGTATATAAGGTTT+TGG + Chr7:61117176-61117195 None:intergenic 20.0%
!!! TTGTTTATTTTGGTTATGTT+TGG - Chr7:61114744-61114763 MsG0780039272.01.T01:intron 20.0%
!!! TTTTGCTATTTCTCATTATT+TGG + Chr7:61119928-61119947 None:intergenic 20.0%
! AAAAATATATAGTGCAGGTT+CGG + Chr7:61118371-61118390 None:intergenic 25.0%
! AACAATTTAAGAAAAAGGGT+AGG - Chr7:61119892-61119911 MsG0780039272.01.T01:intron 25.0%
! ACAAACAGATAGAATATTAC+CGG + Chr7:61115892-61115911 None:intergenic 25.0%
! ACATCAGTTAAATGAATCTT+AGG + Chr7:61117744-61117763 None:intergenic 25.0%
! AGTTAAGTTATTATGCTGTA+AGG - Chr7:61114777-61114796 MsG0780039272.01.T01:intron 25.0%
! ATAGCAAAAATATATAGTGC+AGG + Chr7:61118376-61118395 None:intergenic 25.0%
! ATATGTTCTATTGGAGATAT+GGG - Chr7:61118246-61118265 MsG0780039272.01.T01:intron 25.0%
! ATCATAGTATCATAGTTTGA+TGG + Chr7:61118294-61118313 None:intergenic 25.0%
! ATTCCAATTTATAACTCCAT+AGG - Chr7:61119682-61119701 MsG0780039272.01.T01:intron 25.0%
! CTAATGCAATATGTTATTGT+TGG - Chr7:61115482-61115501 MsG0780039272.01.T01:CDS 25.0%
! CTTAACTGAAGAAATCAAAT+GGG - Chr7:61113844-61113863 MsG0780039272.01.T01:intron 25.0%
! CTTATGAATATGTCTTAATC+TGG - Chr7:61114118-61114137 MsG0780039272.01.T01:intron 25.0%
! CTTCGTTGATATAGTATATA+AGG + Chr7:61117182-61117201 None:intergenic 25.0%
! GAAAATTGACTGTTTGTTTA+TGG - Chr7:61115399-61115418 MsG0780039272.01.T01:CDS 25.0%
! GGATACAGCAAAATATATTT+GGG + Chr7:61114694-61114713 None:intergenic 25.0%
! GTTAAGTTATTATGCTGTAA+GGG - Chr7:61114778-61114797 MsG0780039272.01.T01:intron 25.0%
! TAAAATAAGTCAATCGAAAC+AGG - Chr7:61114192-61114211 MsG0780039272.01.T01:intron 25.0%
! TATAATCATAGCAAGGAAAT+TGG + Chr7:61115937-61115956 None:intergenic 25.0%
! TATATGTTCTATTGGAGATA+TGG - Chr7:61118245-61118264 MsG0780039272.01.T01:intron 25.0%
! TATGCCATTCAAAACTAAAT+TGG - Chr7:61119964-61119983 MsG0780039272.01.T01:intron 25.0%
! TCATAGTATCATAGTTTGAT+GGG + Chr7:61118293-61118312 None:intergenic 25.0%
! TCTAGTCTATTTGTAACATT+TGG - Chr7:61115749-61115768 MsG0780039272.01.T01:intron 25.0%
! TCTTAACTGAAGAAATCAAA+TGG - Chr7:61113843-61113862 MsG0780039272.01.T01:intron 25.0%
! TGTTCAAATGACATTAGATT+TGG + Chr7:61119202-61119221 None:intergenic 25.0%
! TTATCAATACATTACACAGA+AGG + Chr7:61119402-61119421 None:intergenic 25.0%
! TTCCAATTTATAACTCCATA+GGG - Chr7:61119683-61119702 MsG0780039272.01.T01:intron 25.0%
! TTGAGTTATGTATTTGAAGA+GGG - Chr7:61116527-61116546 MsG0780039272.01.T01:intron 25.0%
! TTGTTAAACAAGCTACTAAA+TGG + Chr7:61118663-61118682 None:intergenic 25.0%
! TTTGATGAAAATGTCAAAAG+AGG + Chr7:61116127-61116146 None:intergenic 25.0%
!! AAAAGCAGTATCCTAAATTT+TGG - Chr7:61119038-61119057 MsG0780039272.01.T01:exon 25.0%
!! AAAGCAGTATCCTAAATTTT+GGG - Chr7:61119039-61119058 MsG0780039272.01.T01:exon 25.0%
!! AATATGAGAAAAGCACAAAA+AGG + Chr7:61118888-61118907 None:intergenic 25.0%
!! AATCTGTTTCCTTTTTGTTA+TGG - Chr7:61115523-61115542 MsG0780039272.01.T01:intron 25.0%
!! AGTGTACATTGAGAATATTT+TGG + Chr7:61117892-61117911 None:intergenic 25.0%
!! ATATGAGAAAAGCACAAAAA+GGG + Chr7:61118887-61118906 None:intergenic 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG + Chr7:61118549-61118568 None:intergenic 25.0%
!! TGATAAAATGACATTGATTG+AGG - Chr7:61117677-61117696 MsG0780039272.01.T01:intron 25.0%
!! TGATAATGAGAATGAAATTG+AGG - Chr7:61114574-61114593 MsG0780039272.01.T01:intron 25.0%
!! TGTGTAATGTATTGATAACA+AGG - Chr7:61119404-61119423 MsG0780039272.01.T01:intron 25.0%
!! TTCAAAAGGGTCTTATAATT+AGG + Chr7:61118550-61118569 None:intergenic 25.0%
!! TTCACAATTTTCTGTAGTTT+TGG - Chr7:61116495-61116514 MsG0780039272.01.T01:intron 25.0%
!! TTTTTGTGCTTTTCTCATAT+TGG - Chr7:61118887-61118906 MsG0780039272.01.T01:CDS 25.0%
!!! AAAATTTTAGTTGCCATTCA+GGG - Chr7:61119094-61119113 MsG0780039272.01.T01:intron 25.0%
!!! AATTTTGGGACTTTATAAAG+AGG - Chr7:61119053-61119072 MsG0780039272.01.T01:intron 25.0%
!!! ACTTCTTTGACTTTTATTGT+GGG - Chr7:61115100-61115119 MsG0780039272.01.T01:three_prime_UTR 25.0%
!!! AGTTTTGGATTCAAAAGTTA+AGG - Chr7:61116225-61116244 MsG0780039272.01.T01:intron 25.0%
!!! ATAGAGGTATTATTTTATGC+TGG - Chr7:61117488-61117507 MsG0780039272.01.T01:intron 25.0%
!!! ATTGTTTTACTATGGTTACA+TGG - Chr7:61117211-61117230 MsG0780039272.01.T01:intron 25.0%
!!! ATTTTAATTGTGTAGAATGC+GGG - Chr7:61116455-61116474 MsG0780039272.01.T01:intron 25.0%
!!! ATTTTGAAAAAGATGCATAC+TGG - Chr7:61116146-61116165 MsG0780039272.01.T01:intron 25.0%
!!! ATTTTGGGACTTTATAAAGA+GGG - Chr7:61119054-61119073 MsG0780039272.01.T01:intron 25.0%
!!! CAAAAGTCTTTGAAAGATTT+TGG - Chr7:61119543-61119562 MsG0780039272.01.T01:intron 25.0%
!!! CAATCAATGTCATTTTATCA+AGG + Chr7:61117677-61117696 None:intergenic 25.0%
!!! GAGTTTGGATTTGTTTATTT+TGG - Chr7:61114734-61114753 MsG0780039272.01.T01:intron 25.0%
!!! GCTTATTTTATAATGTATGG+AGG - Chr7:61117446-61117465 MsG0780039272.01.T01:intron 25.0%
!!! GGTCTAAAGTTTTAATTTTC+AGG - Chr7:61114213-61114232 MsG0780039272.01.T01:intron 25.0%
!!! GTTAAATTTTTAGTTAGTGC+CGG - Chr7:61115870-61115889 MsG0780039272.01.T01:intron 25.0%
!!! GTTAATTTGCATTATTGAGT+TGG + Chr7:61119875-61119894 None:intergenic 25.0%
!!! TACTTCTTTGACTTTTATTG+TGG - Chr7:61115099-61115118 MsG0780039272.01.T01:three_prime_UTR 25.0%
!!! TCTATCTGTTTGTTATCTTA+AGG - Chr7:61115899-61115918 MsG0780039272.01.T01:intron 25.0%
AAAAGATCTTTATCTCTGGA+TGG - Chr7:61115824-61115843 MsG0780039272.01.T01:CDS 30.0%
AAACACAAACCTGGTAATTT+CGG + Chr7:61116750-61116769 None:intergenic 30.0%
AAATAAGCTGGTCATGTTTA+AGG + Chr7:61118485-61118504 None:intergenic 30.0%
AAATGACATTAGATTTGGCT+CGG + Chr7:61119197-61119216 None:intergenic 30.0%
AACCCTATGGAGTTATAAAT+TGG + Chr7:61119688-61119707 None:intergenic 30.0%
AACTACAGAAAATTGTGAAC+AGG + Chr7:61116494-61116513 None:intergenic 30.0%
AACTCAAACTCGAGATTAAA+TGG + Chr7:61115707-61115726 None:intergenic 30.0%
AATAAGCTGGTCATGTTTAA+GGG + Chr7:61118484-61118503 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG + Chr7:61113973-61113992 None:intergenic 30.0%
AATCCGATTAAAATATTCGG+TGG - Chr7:61117804-61117823 MsG0780039272.01.T01:intron 30.0%
ACAAGCTACTAAATGGAAAA+AGG + Chr7:61118656-61118675 None:intergenic 30.0%
ACCTTATATCCATCATGAAA+TGG - Chr7:61118165-61118184 MsG0780039272.01.T01:intron 30.0%
AGTTGAAGCTACAAGTAAAT+TGG + Chr7:61113572-61113591 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG + Chr7:61113972-61113991 None:intergenic 30.0%
ATACAACTTTCGATCATACT+AGG + Chr7:61116311-61116330 None:intergenic 30.0%
ATACTTAAGCCTGTTTGTAA+AGG + Chr7:61117061-61117080 None:intergenic 30.0%
ATTGAATCAAAGTGGCAAAT+GGG - Chr7:61113885-61113904 MsG0780039272.01.T01:intron 30.0%
ATTTATAACTCCATAGGGTT+TGG - Chr7:61119688-61119707 MsG0780039272.01.T01:intron 30.0%
CAAAAAGAAGAATGAAGAAC+TGG + Chr7:61115981-61116000 None:intergenic 30.0%
CAAAAATCACCATTTCATGA+TGG + Chr7:61118177-61118196 None:intergenic 30.0%
CGGATACAGCAAAATATATT+TGG + Chr7:61114695-61114714 None:intergenic 30.0%
CTGAAATTCACATACAAAGA+AGG + Chr7:61115793-61115812 None:intergenic 30.0%
CTTGAGTTATGTATTTGAAG+AGG - Chr7:61116526-61116545 MsG0780039272.01.T01:intron 30.0%
GAGAACAAAATTACTGAACT+CGG + Chr7:61113759-61113778 None:intergenic 30.0%
GTTGAATCGAAAGAAACTAA+GGG - Chr7:61115227-61115246 MsG0780039272.01.T01:three_prime_UTR 30.0%
GTTGTATCCATAAACTATCT+TGG - Chr7:61114883-61114902 MsG0780039272.01.T01:intron 30.0%
TAGTCTAGGAGAAAAGAAAA+TGG - Chr7:61117302-61117321 MsG0780039272.01.T01:intron 30.0%
TATTGAATCAAAGTGGCAAA+TGG - Chr7:61113884-61113903 MsG0780039272.01.T01:intron 30.0%
TCACTCTAAGTCAAAAACTA+TGG + Chr7:61116938-61116957 None:intergenic 30.0%
TCATTGCAAAAAGGATAACA+AGG - Chr7:61115205-61115224 MsG0780039272.01.T01:three_prime_UTR 30.0%
TCGATAATACCATCTTAGTT+TGG - Chr7:61116253-61116272 MsG0780039272.01.T01:intron 30.0%
TGAGTTATGTATTTGAAGAG+GGG - Chr7:61116528-61116547 MsG0780039272.01.T01:intron 30.0%
TTATAGACTTCTCAAGTCAA+CGG + Chr7:61116404-61116423 None:intergenic 30.0%
TTGCGTAATCCATAACAAAA+AGG + Chr7:61115535-61115554 None:intergenic 30.0%
! AGAAAATGGATTCTTCACAT+AGG - Chr7:61117316-61117335 MsG0780039272.01.T01:CDS 30.0%
! AGTGGATTCTCATATAAAGT+CGG + Chr7:61117843-61117862 None:intergenic 30.0%
! ATAATACCATCTTAGTTTGG+TGG - Chr7:61116256-61116275 MsG0780039272.01.T01:intron 30.0%
! CATCATGAAATGGTGATTTT+TGG - Chr7:61118175-61118194 MsG0780039272.01.T01:intron 30.0%
! CTTTTCACTAAAAGCAAGAA+TGG - Chr7:61118135-61118154 MsG0780039272.01.T01:intron 30.0%
! TTACTCACTTTGCATTTTAG+AGG + Chr7:61119716-61119735 None:intergenic 30.0%
! TTGTTATCCTTTTTGCAATG+AGG + Chr7:61115206-61115225 None:intergenic 30.0%
!! AAGTCTTTGAAAGATTTTGG+AGG - Chr7:61119546-61119565 MsG0780039272.01.T01:intron 30.0%
!! ACCATTTCATGATGGATATA+AGG + Chr7:61118169-61118188 None:intergenic 30.0%
!! AGTCTTTGAAAGATTTTGGA+GGG - Chr7:61119547-61119566 MsG0780039272.01.T01:intron 30.0%
!! CAAATTAAAGCATTAGCCTT+AGG - Chr7:61117033-61117052 MsG0780039272.01.T01:intron 30.0%
!! GGATTTTAGCAAGAAATTCA+AGG - Chr7:61113632-61113651 MsG0780039272.01.T01:intron 30.0%
!! TAAGAGTATTCTGGAATGTA+AGG - Chr7:61119249-61119268 MsG0780039272.01.T01:intron 30.0%
!! TGACTTTTATTGTGGGTTAT+TGG - Chr7:61115107-61115126 MsG0780039272.01.T01:three_prime_UTR 30.0%
!! TTCTTGCTTTTAGTGAAAAG+AGG + Chr7:61118135-61118154 None:intergenic 30.0%
!! TTTTTAGCCTAAGATTGACT+TGG - Chr7:61118452-61118471 MsG0780039272.01.T01:intron 30.0%
!!! ACTGATTTTTTGTAAACCAC+TGG - Chr7:61117244-61117263 MsG0780039272.01.T01:intron 30.0%
!!! ACTTGCATTTTTTTCAGATG+TGG - Chr7:61117514-61117533 MsG0780039272.01.T01:intron 30.0%
!!! AGAATATTTTGGTTGTTACC+TGG + Chr7:61117881-61117900 None:intergenic 30.0%
!!! GAAAATTTTAGTTGCCATTC+AGG - Chr7:61119093-61119112 MsG0780039272.01.T01:intron 30.0%
!!! TTCGTCGTGTTTATTTTTTG+AGG - Chr7:61115286-61115305 MsG0780039272.01.T01:three_prime_UTR 30.0%
AAACACTTGTGAGACTGTTA+GGG + Chr7:61114972-61114991 None:intergenic 35.0%
AAATCACCACCAAACTAAGA+TGG + Chr7:61116265-61116284 None:intergenic 35.0%
AAATGCAAAGTGAGTAAGTC+AGG - Chr7:61119719-61119738 MsG0780039272.01.T01:intron 35.0%
AACAGCTTATTTGCAGCTTA+CGG - Chr7:61113982-61114001 MsG0780039272.01.T01:intron 35.0%
AAGCACAAAAAGGGAACAAA+TGG + Chr7:61118878-61118897 None:intergenic 35.0%
AAGCACAAATTTATCCCCAA+AGG + Chr7:61119134-61119153 None:intergenic 35.0%
AAGCTTCTAATGAAGCTTCT+AGG + Chr7:61113699-61113718 None:intergenic 35.0%
AATGCAAAGTGAGTAAGTCA+GGG - Chr7:61119720-61119739 MsG0780039272.01.T01:intron 35.0%
AATTTATCCCCAAAGGAGTA+AGG + Chr7:61119127-61119146 None:intergenic 35.0%
AATTTGTCTGACTCATTGTG+AGG + Chr7:61117642-61117661 None:intergenic 35.0%
ACATAGAAAACCAATTTGGG+AGG + Chr7:61115636-61115655 None:intergenic 35.0%
ACTTGCTCGAGATTAATAAC+TGG + Chr7:61115730-61115749 None:intergenic 35.0%
AGAAAACAAAAACGTGGTCA+TGG + Chr7:61116702-61116721 None:intergenic 35.0%
AGAAACTAGTAAAATGGCCT+CGG + Chr7:61116028-61116047 None:intergenic 35.0%
AGCAATGTTAGCAAAGAAAG+AGG + Chr7:61116985-61117004 None:intergenic 35.0%
AGCTTTGCAGAAGAAGAAAA+AGG - Chr7:61117990-61118009 MsG0780039272.01.T01:intron 35.0%
AGGCAAAAGATCTTTATCTC+TGG - Chr7:61115820-61115839 MsG0780039272.01.T01:CDS 35.0%
ATAGAAAACCAATTTGGGAG+GGG + Chr7:61115634-61115653 None:intergenic 35.0%
ATTAAATCATCTTCCCCATG+TGG + Chr7:61114411-61114430 None:intergenic 35.0%
ATTGATTGAGGTCTGCAAAT+TGG - Chr7:61117689-61117708 MsG0780039272.01.T01:intron 35.0%
ATTGTCTACACTTCTAGTCT+AGG - Chr7:61117288-61117307 MsG0780039272.01.T01:intron 35.0%
ATTTGTGCTTTCATCAGTCA+TGG - Chr7:61119144-61119163 MsG0780039272.01.T01:intron 35.0%
CAAGTAGTATTTAGCAGACA+AGG - Chr7:61118423-61118442 MsG0780039272.01.T01:intron 35.0%
CAATCGAGAAAACAAAAACG+TGG + Chr7:61116708-61116727 None:intergenic 35.0%
CATAGAAAACCAATTTGGGA+GGG + Chr7:61115635-61115654 None:intergenic 35.0%
CCAAGTTCAACATCAAATGT+CGG + Chr7:61115172-61115191 None:intergenic 35.0%
CCGTGAATGAAATTACTACA+CGG + Chr7:61113669-61113688 None:intergenic 35.0%
CCGTGTAGTAATTTCATTCA+CGG - Chr7:61113666-61113685 MsG0780039272.01.T01:intron 35.0%
CTATGGCTAACCAAAACAAT+TGG + Chr7:61116921-61116940 None:intergenic 35.0%
GAAATTGAGGCTAAGGATAA+TGG - Chr7:61114587-61114606 MsG0780039272.01.T01:intron 35.0%
GGTAATTTCGGAACCATATA+TGG + Chr7:61116738-61116757 None:intergenic 35.0%
GGTTGAATCGAAAGAAACTA+AGG - Chr7:61115226-61115245 MsG0780039272.01.T01:three_prime_UTR 35.0%
GTGGATTCTCATATAAAGTC+GGG + Chr7:61117842-61117861 None:intergenic 35.0%
TAAACACTTGTGAGACTGTT+AGG + Chr7:61114973-61114992 None:intergenic 35.0%
TACATGATAATAGCATCCAG+TGG + Chr7:61117263-61117282 None:intergenic 35.0%
TATATGGTTCCGAAATTACC+AGG - Chr7:61116738-61116757 MsG0780039272.01.T01:intron 35.0%
TCAAAAGTCACACACATGAT+CGG + Chr7:61114262-61114281 None:intergenic 35.0%
TGAGAAAACAAGACATATGC+TGG + Chr7:61119468-61119487 None:intergenic 35.0%
TGAGAATGAAATTGAGGCTA+AGG - Chr7:61114580-61114599 MsG0780039272.01.T01:intron 35.0%
TGCATACTGGAAATTGTTGA+AGG - Chr7:61116159-61116178 MsG0780039272.01.T01:intron 35.0%
TGCTAAAAACAAATAAGCGC+TGG - Chr7:61116876-61116895 MsG0780039272.01.T01:intron 35.0%
TTCTCTTTGTTCCTGAATAC+AGG + Chr7:61114620-61114639 None:intergenic 35.0%
TTCTTTGCTAACATTGCTGA+TGG - Chr7:61116987-61117006 MsG0780039272.01.T01:intron 35.0%
TTGTATGTGAATTTCAGTGC+AGG - Chr7:61115796-61115815 MsG0780039272.01.T01:intron 35.0%
TTTGCATAAGTTCTCCAAGA+TGG + Chr7:61114084-61114103 None:intergenic 35.0%
! AACATTGCTGATGGATAAAC+TGG - Chr7:61116996-61117015 MsG0780039272.01.T01:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG + Chr7:61118545-61118564 None:intergenic 35.0%
! AATGACATTAGATTTGGCTC+GGG + Chr7:61119196-61119215 None:intergenic 35.0%
! ACAATGCCTAGTTCTCATAT+TGG - Chr7:61118833-61118852 MsG0780039272.01.T01:CDS 35.0%
! ACATTGCTGATGGATAAACT+GGG - Chr7:61116997-61117016 MsG0780039272.01.T01:intron 35.0%
! ATAAGTTATCTGAGACTGCT+TGG + Chr7:61114158-61114177 None:intergenic 35.0%
! CAGGAACAAAGAGAAAGTTT+TGG - Chr7:61114625-61114644 MsG0780039272.01.T01:intron 35.0%
! TAAGTTATCTGAGACTGCTT+GGG + Chr7:61114157-61114176 None:intergenic 35.0%
! TACTCTTCTATGCACAGTTT+TGG - Chr7:61116210-61116229 MsG0780039272.01.T01:intron 35.0%
! TCATTTTATCAAGGCTTCCA+CGG + Chr7:61117668-61117687 None:intergenic 35.0%
! TGGACAAGAAAAAGCACAAA+AGG + Chr7:61118943-61118962 None:intergenic 35.0%
! TTGTGCTTTTCTCATATTGG+TGG - Chr7:61118890-61118909 MsG0780039272.01.T01:CDS 35.0%
! TTTTAATGCAAGACCCTGTT+TGG - Chr7:61113956-61113975 MsG0780039272.01.T01:intron 35.0%
! TTTTCAAAAGACGAATCTGC+AGG + Chr7:61119022-61119041 None:intergenic 35.0%
! TTTTCTTCTTCTGCAAAGCT+CGG + Chr7:61117990-61118009 None:intergenic 35.0%
!! AAAATATTCGGTGGCAGTTT+TGG - Chr7:61117813-61117832 MsG0780039272.01.T01:intron 35.0%
!! ATCTTAGTTTGGTGGTGATT+TGG - Chr7:61116264-61116283 MsG0780039272.01.T01:intron 35.0%
!! CGATTGTTGATGACCATATA+TGG - Chr7:61116722-61116741 MsG0780039272.01.T01:intron 35.0%
!! GGTGATGATTAAGAGTATTC+TGG - Chr7:61119240-61119259 MsG0780039272.01.T01:intron 35.0%
!! TCTTAGTTTGGTGGTGATTT+GGG - Chr7:61116265-61116284 MsG0780039272.01.T01:intron 35.0%
!!! AAGTTTTGGTTACTTGCTCT+AGG - Chr7:61114639-61114658 MsG0780039272.01.T01:intron 35.0%
!!! ATGAAATGGTGATTTTTGGC+TGG - Chr7:61118179-61118198 MsG0780039272.01.T01:intron 35.0%
!!! ATTTTGGTTGTTACCTGGTT+TGG + Chr7:61117876-61117895 None:intergenic 35.0%
!!! CTGCCACCGAATATTTTAAT+CGG + Chr7:61117810-61117829 None:intergenic 35.0%
!!! GCTGCCAATTTAGTTTTGAA+TGG + Chr7:61119971-61119990 None:intergenic 35.0%
!!! GGGTTATTGGCTTTTGAATA+TGG - Chr7:61115120-61115139 MsG0780039272.01.T01:three_prime_UTR 35.0%
!!! GTTTGTGCTTGTTTTGAGTT+TGG - Chr7:61114719-61114738 MsG0780039272.01.T01:intron 35.0%
AAACTATCTTGGAGAGCTCA+TGG - Chr7:61114894-61114913 MsG0780039272.01.T01:intron 40.0%
AAGAACATTTCCAGTGCAGT+TGG - Chr7:61119337-61119356 MsG0780039272.01.T01:intron 40.0%
AAGACATCCTTACTCCTTTG+GGG - Chr7:61119117-61119136 MsG0780039272.01.T01:intron 40.0%
AAGGAGGAAAATGCATGAGA+TGG - Chr7:61118047-61118066 MsG0780039272.01.T01:intron 40.0%
ACAAAAACGTGGTCATGGAA+AGG + Chr7:61116697-61116716 None:intergenic 40.0%
AGAAGGTCAAAGCAAAGACA+AGG - Chr7:61118028-61118047 MsG0780039272.01.T01:intron 40.0%
AGATTTGTAGCCAAACCACA+TGG - Chr7:61114393-61114412 MsG0780039272.01.T01:intron 40.0%
ATGCAAAGTGAGTAAGTCAG+GGG - Chr7:61119721-61119740 MsG0780039272.01.T01:intron 40.0%
ATGGAGGAATTGAAGCTTAC+TGG - Chr7:61116079-61116098 MsG0780039272.01.T01:intron 40.0%
ATGTGAATTTCAGTGCAGGA+AGG - Chr7:61115800-61115819 MsG0780039272.01.T01:intron 40.0%
ATTTGTAGCCAAACCACATG+GGG - Chr7:61114395-61114414 MsG0780039272.01.T01:intron 40.0%
CAAAAAGCCGCTATAGAGAA+CGG + Chr7:61118209-61118228 None:intergenic 40.0%
CAAAACAAGCACAAACTGTG+CGG + Chr7:61114715-61114734 None:intergenic 40.0%
CACATATCAGCAAACTCATC+AGG + Chr7:61118087-61118106 None:intergenic 40.0%
CACTGTCGATCAATCATAAC+TGG + Chr7:61114323-61114342 None:intergenic 40.0%
CAGAGAGAGAAAGAAGCTTA+CGG + Chr7:61113499-61113518 None:intergenic 40.0%
CCGACATTTGATGTTGAACT+TGG - Chr7:61115169-61115188 MsG0780039272.01.T01:three_prime_UTR 40.0%
CCTGTTTGTAAAGGAACCTA+AGG + Chr7:61117052-61117071 None:intergenic 40.0%
CCTTAGGTTCCTTTACAAAC+AGG - Chr7:61117049-61117068 MsG0780039272.01.T01:intron 40.0%
CTTACTGGGAATCACCTAAA+AGG - Chr7:61116094-61116113 MsG0780039272.01.T01:intron 40.0%
CTTATCCTTCCATCCCAAAA+GGG + Chr7:61114552-61114571 None:intergenic 40.0%
GAAGACATCCTTACTCCTTT+GGG - Chr7:61119116-61119135 MsG0780039272.01.T01:intron 40.0%
GAAGAGAAAGCGAAGTGAAA+AGG - Chr7:61114469-61114488 MsG0780039272.01.T01:intron 40.0%
GACTGTTTGTTTATGGTGTG+AGG - Chr7:61115406-61115425 MsG0780039272.01.T01:CDS 40.0%
GAGATGCTGTTACAGGTATT+TGG - Chr7:61116181-61116200 MsG0780039272.01.T01:intron 40.0%
GAGCTCTCCAAGATAGTTTA+TGG + Chr7:61114893-61114912 None:intergenic 40.0%
GATTTGTAGCCAAACCACAT+GGG - Chr7:61114394-61114413 MsG0780039272.01.T01:intron 40.0%
GCATAAGCCAAGTCAATCTT+AGG + Chr7:61118462-61118481 None:intergenic 40.0%
GGATGAAAAAGGAGTTACAC+TGG - Chr7:61119303-61119322 MsG0780039272.01.T01:intron 40.0%
GGGGGGAAGGAAATATTTAA+AGG + Chr7:61118806-61118825 None:intergenic 40.0%
TATGTATTTGAAGAGGGGTG+TGG - Chr7:61116533-61116552 MsG0780039272.01.T01:intron 40.0%
TCTTATCCTTCCATCCCAAA+AGG + Chr7:61114553-61114572 None:intergenic 40.0%
TGCAAATGCAAACACAAACC+TGG + Chr7:61116759-61116778 None:intergenic 40.0%
TGCAAGCTACTTGTTTAGGT+TGG - Chr7:61117765-61117784 MsG0780039272.01.T01:intron 40.0%
TGGAGGAATTGAAGCTTACT+GGG - Chr7:61116080-61116099 MsG0780039272.01.T01:intron 40.0%
TGTGTGCAAGCTACTTGTTT+AGG - Chr7:61117761-61117780 MsG0780039272.01.T01:intron 40.0%
TTAACAAAGTGTGCGTTCCT+AGG - Chr7:61118676-61118695 MsG0780039272.01.T01:intron 40.0%
TTCACTTCACAAGCTCTTCT+TGG - Chr7:61119429-61119448 MsG0780039272.01.T01:intron 40.0%
TTGCAGAAGAAGAAAAAGGC+TGG - Chr7:61117994-61118013 MsG0780039272.01.T01:intron 40.0%
TTGCCACCAATATGAGAACT+AGG + Chr7:61118842-61118861 None:intergenic 40.0%
TTTAGAGGATCCAAACCCTA+TGG + Chr7:61119701-61119720 None:intergenic 40.0%
! AACTAGGCATTGTAGAGTGA+GGG + Chr7:61118826-61118845 None:intergenic 40.0%
! AAGTTATCTGAGACTGCTTG+GGG + Chr7:61114156-61114175 None:intergenic 40.0%
! ATGCCTAGTTCTCATATTGG+TGG - Chr7:61118836-61118855 MsG0780039272.01.T01:CDS 40.0%
! ATTTTATCAAGGCTTCCACG+GGG + Chr7:61117666-61117685 None:intergenic 40.0%
! CATTTTATCAAGGCTTCCAC+GGG + Chr7:61117667-61117686 None:intergenic 40.0%
! CCAGATATTTGAAACACCGA+AGG - Chr7:61116654-61116673 MsG0780039272.01.T01:intron 40.0%
! GTTGCTCACTTTAGAAGAGT+CGG - Chr7:61119847-61119866 MsG0780039272.01.T01:intron 40.0%
! TGCTTTTAGTGAAAAGAGGC+AGG + Chr7:61118131-61118150 None:intergenic 40.0%
!! CCTTCGGTGTTTCAAATATC+TGG + Chr7:61116657-61116676 None:intergenic 40.0%
!! CTGAGTAAGCTCTAAAGATG+TGG - Chr7:61119489-61119508 MsG0780039272.01.T01:intron 40.0%
!! CTGATGAGTTTGCTGATATG+TGG - Chr7:61118085-61118104 MsG0780039272.01.T01:intron 40.0%
!! CTTAGTTTGGTGGTGATTTG+GGG - Chr7:61116266-61116285 MsG0780039272.01.T01:intron 40.0%
!! GTTATGTTTGGCTCTTGTCA+TGG - Chr7:61116426-61116445 MsG0780039272.01.T01:intron 40.0%
!! TACTTGTTTAGGTTGGTCCA+CGG - Chr7:61117772-61117791 MsG0780039272.01.T01:intron 40.0%
!! TTAGTTTGGTGGTGATTTGG+GGG - Chr7:61116267-61116286 MsG0780039272.01.T01:intron 40.0%
!!! GCTGTTTTAACAAGCCATCT+TGG - Chr7:61114067-61114086 MsG0780039272.01.T01:intron 40.0%
AAATTTAACAGACGGGCCGT+TGG + Chr7:61115859-61115878 None:intergenic 45.0%
AACATTTCCAGTGCAGTTGG+TGG - Chr7:61119340-61119359 MsG0780039272.01.T01:intron 45.0%
AAGTGAAAAGGCTGAAGCTG+AGG - Chr7:61114481-61114500 MsG0780039272.01.T01:intron 45.0%
AATTCCTCCATTGTGTGCAC+TGG + Chr7:61116070-61116089 None:intergenic 45.0%
AATTTAACAGACGGGCCGTT+GGG + Chr7:61115858-61115877 None:intergenic 45.0%
ACCAAACATACCCTTAGCCT+AGG + Chr7:61118696-61118715 None:intergenic 45.0%
ACGCTACCACATGTGATTGA+CGG - Chr7:61117361-61117380 MsG0780039272.01.T01:CDS 45.0%
AGCAACATAAGCATGCACGA+GGG + Chr7:61113800-61113819 None:intergenic 45.0%
AGGTCAAAGCAAAGACAAGG+AGG - Chr7:61118031-61118050 MsG0780039272.01.T01:intron 45.0%
ATATATAGTGCAGGTTCGGC+AGG + Chr7:61118367-61118386 None:intergenic 45.0%
ATCATCTTCCCCATGTGGTT+TGG + Chr7:61114406-61114425 None:intergenic 45.0%
ATCGGATTCAAGCAAAACCG+TGG + Chr7:61117792-61117811 None:intergenic 45.0%
ATGGTGCTTCACCTGTATTC+AGG - Chr7:61114606-61114625 MsG0780039272.01.T01:intron 45.0%
CAATTTGGGAGGGGAAACAA+AGG + Chr7:61115625-61115644 None:intergenic 45.0%
CCACCTGCTTCATCTTCAAT+CGG - Chr7:61113447-61113466 MsG0780039272.01.T01:intron 45.0%
CGATTGAAGATGAAGCAGGT+GGG + Chr7:61113449-61113468 None:intergenic 45.0%
CTAGAGACGAAGAGAGTAAG+AGG + Chr7:61120031-61120050 None:intergenic 45.0%
CTCAACAAGCTCATTCAAGG+TGG + Chr7:61115255-61115274 None:intergenic 45.0%
CTTATAATTAGGGACGGAGG+TGG + Chr7:61118539-61118558 None:intergenic 45.0%
GAATACAAGCCGAGTCTTAC+TGG - Chr7:61119271-61119290 MsG0780039272.01.T01:intron 45.0%
GAGCTCAACAAGCTCATTCA+AGG + Chr7:61115258-61115277 None:intergenic 45.0%
GCTTCTGCCTCATTGCAAAA+AGG - Chr7:61115196-61115215 MsG0780039272.01.T01:three_prime_UTR 45.0%
GGAAGACATCCTTACTCCTT+TGG - Chr7:61119115-61119134 MsG0780039272.01.T01:intron 45.0%
GTAAACTCGTGTGTGTTCAG+AGG + Chr7:61119586-61119605 None:intergenic 45.0%
GTAAGGATGTCTTCCCTGAA+TGG + Chr7:61119110-61119129 None:intergenic 45.0%
GTAGATCCGTCAATCACATG+TGG + Chr7:61117370-61117389 None:intergenic 45.0%
GTTGAAGGAGATGCTGTTAC+AGG - Chr7:61116174-61116193 MsG0780039272.01.T01:intron 45.0%
TATATAGTGCAGGTTCGGCA+GGG + Chr7:61118366-61118385 None:intergenic 45.0%
TTTCTCTTCCCCATGTGGTT+TGG + Chr7:61114458-61114477 None:intergenic 45.0%
! AAAGAGGACGAGAGCCTTTT+AGG + Chr7:61116111-61116130 None:intergenic 45.0%
! AATCACATGTGGTAGCGTCA+TGG + Chr7:61117359-61117378 None:intergenic 45.0%
! ACTAGGCATTGTAGAGTGAG+GGG + Chr7:61118825-61118844 None:intergenic 45.0%
! AGTTATCTGAGACTGCTTGG+GGG + Chr7:61114155-61114174 None:intergenic 45.0%
! CTGCACACAAAGAGCTTGTT+TGG + Chr7:61115026-61115045 None:intergenic 45.0%
! CTTTGTTTCCCCTCCCAAAT+TGG - Chr7:61115623-61115642 MsG0780039272.01.T01:intron 45.0%
! GAACTAGGCATTGTAGAGTG+AGG + Chr7:61118827-61118846 None:intergenic 45.0%
! GCTCTAGGCGTATTGTTTAC+AGG - Chr7:61114654-61114673 MsG0780039272.01.T01:intron 45.0%
! GGAGCAACATCCTCCTTTTT+GGG + Chr7:61114512-61114531 None:intergenic 45.0%
! GGTCTTATAATTAGGGACGG+AGG + Chr7:61118542-61118561 None:intergenic 45.0%
! TCCTAGGCTAAGGGTATGTT+TGG - Chr7:61118692-61118711 MsG0780039272.01.T01:intron 45.0%
! TGGAGCAACATCCTCCTTTT+TGG + Chr7:61114513-61114532 None:intergenic 45.0%
! TTAGCCTTTCTGTGGTCCTT+CGG + Chr7:61116673-61116692 None:intergenic 45.0%
!! AACATCCTCCTTTTTGGGCA+CGG + Chr7:61114507-61114526 None:intergenic 45.0%
!! ACAAATAAGCGCTGGCATCT+TGG - Chr7:61116884-61116903 MsG0780039272.01.T01:intron 45.0%
!! ACTCCTTTTTCATCCACCAC+CGG + Chr7:61119298-61119317 None:intergenic 45.0%
!! AGAAGGAGTATCCGCTCATT+GGG + Chr7:61119385-61119404 None:intergenic 45.0%
!! ATATTCGGTGGCAGTTTTGG+AGG - Chr7:61117816-61117835 MsG0780039272.01.T01:intron 45.0%
!! GAAAGATTTTGGAGGGTCTG+TGG - Chr7:61119554-61119573 MsG0780039272.01.T01:intron 45.0%
!!! CTTTTAGTCTTACCTCCCAG+GGG - Chr7:61118984-61119003 MsG0780039272.01.T01:CDS 45.0%
!!! GCTTTTAGTCTTACCTCCCA+GGG - Chr7:61118983-61119002 MsG0780039272.01.T01:CDS 45.0%
!!! TGCTTTTAGTCTTACCTCCC+AGG - Chr7:61118982-61119001 MsG0780039272.01.T01:CDS 45.0%
AACACCGAAGGACCACAGAA+AGG - Chr7:61116666-61116685 MsG0780039272.01.T01:intron 50.0%
AAGTGTGCGTTCCTAGGCTA+AGG - Chr7:61118682-61118701 MsG0780039272.01.T01:intron 50.0%
AGGCAAAGCAAATGTCCCCT+GGG + Chr7:61119002-61119021 None:intergenic 50.0%
AGTGTGCGTTCCTAGGCTAA+GGG - Chr7:61118683-61118702 MsG0780039272.01.T01:intron 50.0%
ATTTAACAGACGGGCCGTTG+GGG + Chr7:61115857-61115876 None:intergenic 50.0%
CCGATTGAAGATGAAGCAGG+TGG + Chr7:61113450-61113469 None:intergenic 50.0%
CTCATCAGGCTCAAGAGGAT+TGG + Chr7:61118073-61118092 None:intergenic 50.0%
CTGCTTTCCAGTGCACACAA+TGG - Chr7:61116060-61116079 MsG0780039272.01.T01:intron 50.0%
CTTTCCAGTGCACACAATGG+AGG - Chr7:61116063-61116082 MsG0780039272.01.T01:intron 50.0%
GAGCAACATAAGCATGCACG+AGG + Chr7:61113801-61113820 None:intergenic 50.0%
GAGTCAGACAAATTACCCCG+TGG - Chr7:61117648-61117667 MsG0780039272.01.T01:CDS 50.0%
GCAAACTCATCAGGCTCAAG+AGG + Chr7:61118078-61118097 None:intergenic 50.0%
GGCTGGAACGTTTGCAAAGA+AGG - Chr7:61118011-61118030 MsG0780039272.01.T01:intron 50.0%
TACAACACCACCAACTGCAC+TGG + Chr7:61119350-61119369 None:intergenic 50.0%
TGGATGGCAAAATGCCCCAA+CGG - Chr7:61115840-61115859 MsG0780039272.01.T01:CDS 50.0%
TGGCAGTCCGTTCTCTATAG+CGG - Chr7:61118199-61118218 MsG0780039272.01.T01:intron 50.0%
TGTGCACTGGAAAGCAGTGA+CGG + Chr7:61116057-61116076 None:intergenic 50.0%
TTACGGAGCTGCGACGATTT+CGG + Chr7:61113482-61113501 None:intergenic 50.0%
TTCGCTTTCTCTTCCCCATG+TGG + Chr7:61114463-61114482 None:intergenic 50.0%
! AGACCAGTGAGGACCCTTTT+GGG - Chr7:61114536-61114555 MsG0780039272.01.T01:intron 50.0%
! CTAGGCATTGTAGAGTGAGG+GGG + Chr7:61118824-61118843 None:intergenic 50.0%
! GGAAAGGCTTAGCCTTTCTG+TGG + Chr7:61116681-61116700 None:intergenic 50.0%
! TAGGCATTGTAGAGTGAGGG+GGG + Chr7:61118823-61118842 None:intergenic 50.0%
!! CAGAAGGAGTATCCGCTCAT+TGG + Chr7:61119386-61119405 None:intergenic 50.0%
!! GAAGGAGTATCCGCTCATTG+GGG + Chr7:61119384-61119403 None:intergenic 50.0%
!!! GCGCGCGTGCATTTTTTTCT+TGG - Chr7:61116567-61116586 MsG0780039272.01.T01:intron 50.0%
ACCACCGGACCAGTAAGACT+CGG + Chr7:61119283-61119302 None:intergenic 55.0%
ACTCTACGTGTCGCCAAACC+AGG - Chr7:61117860-61117879 MsG0780039272.01.T01:intron 55.0%
AGTATCCGCTCATTGGGGAG+AGG + Chr7:61119379-61119398 None:intergenic 55.0%
ATGGCCTCGGAGAGAAAGAG+AGG + Chr7:61116015-61116034 None:intergenic 55.0%
CAAAGCAAATGTCCCCTGGG+AGG + Chr7:61118999-61119018 None:intergenic 55.0%
CAAGCCGAGTCTTACTGGTC+CGG - Chr7:61119276-61119295 MsG0780039272.01.T01:intron 55.0%
CAGGCAAAGCAAATGTCCCC+TGG + Chr7:61119003-61119022 None:intergenic 55.0%
CATCCCAAAAGGGTCCTCAC+TGG + Chr7:61114542-61114561 None:intergenic 55.0%
CATTGTAGAGTGAGGGGGGA+AGG + Chr7:61118819-61118838 None:intergenic 55.0%
GTATCCGCTCATTGGGGAGA+GGG + Chr7:61119378-61119397 None:intergenic 55.0%
TATCCGCTCATTGGGGAGAG+GGG + Chr7:61119377-61119396 None:intergenic 55.0%
TTGCTCCAGAGAGACCAGTG+AGG - Chr7:61114525-61114544 MsG0780039272.01.T01:intron 55.0%
! GAGACCAGTGAGGACCCTTT+TGG - Chr7:61114535-61114554 MsG0780039272.01.T01:intron 55.0%
! TGGTTTGGCGACACGTAGAG+TGG + Chr7:61117861-61117880 None:intergenic 55.0%
!! CAGTGAGGACCCTTTTGGGA+TGG - Chr7:61114540-61114559 MsG0780039272.01.T01:intron 55.0%
!! GCGCCGATTGAAGATGAAGC+AGG + Chr7:61113453-61113472 None:intergenic 55.0%
!! GGTCCGGTGGTGGATGAAAA+AGG - Chr7:61119292-61119311 MsG0780039272.01.T01:intron 55.0%
!!! GAGGACCCTTTTGGGATGGA+AGG - Chr7:61114544-61114563 MsG0780039272.01.T01:intron 55.0%
ACCGCCTCTCTTTCTCTCCG+AGG - Chr7:61116008-61116027 MsG0780039272.01.T01:intron 60.0%
AGCTGAGGCCGTGCCCAAAA+AGG - Chr7:61114496-61114515 MsG0780039272.01.T01:intron 60.0%
GAGTCTTACTGGTCCGGTGG+TGG - Chr7:61119282-61119301 MsG0780039272.01.T01:intron 60.0%
GCCTCGGAGAGAAAGAGAGG+CGG + Chr7:61116012-61116031 None:intergenic 60.0%
GCTGCGACGATTTCGGTCGA+AGG + Chr7:61113475-61113494 None:intergenic 60.0%
TAGTGCAGGTTCGGCAGGGT+AGG + Chr7:61118362-61118381 None:intergenic 60.0%
TGAGGCCGTGCCCAAAAAGG+AGG - Chr7:61114499-61114518 MsG0780039272.01.T01:intron 60.0%
! AGGGTCCTCACTGGTCTCTC+TGG + Chr7:61114533-61114552 None:intergenic 60.0%
CCACCCCTCTCCCCAATGAG+CGG - Chr7:61119371-61119390 MsG0780039272.01.T01:intron 65.0%
GCCGAGTCTTACTGGTCCGG+TGG - Chr7:61119279-61119298 MsG0780039272.01.T01:intron 65.0%
CCGCTCATTGGGGAGAGGGG+TGG + Chr7:61119374-61119393 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 61113430 61120078 61113430 ID=MsG0780039272.01;Name=MsG0780039272.01
Chr7 mRNA 61113430 61120078 61113430 ID=MsG0780039272.01.T01;Parent=MsG0780039272.01;Name=MsG0780039272.01.T01;_AED=0.38;_eAED=0.38;_QI=85|0.87|0.88|1|0.75|0.55|9|333|270
Chr7 exon 61113430 61113453 61113430 ID=MsG0780039272.01.T01:exon:16315;Parent=MsG0780039272.01.T01
Chr7 exon 61115083 61115523 61115083 ID=MsG0780039272.01.T01:exon:16314;Parent=MsG0780039272.01.T01
Chr7 exon 61115627 61115725 61115627 ID=MsG0780039272.01.T01:exon:16313;Parent=MsG0780039272.01.T01
Chr7 exon 61115810 61115878 61115810 ID=MsG0780039272.01.T01:exon:16312;Parent=MsG0780039272.01.T01
Chr7 exon 61116749 61116850 61116749 ID=MsG0780039272.01.T01:exon:16311;Parent=MsG0780039272.01.T01
Chr7 exon 61117313 61117437 61117313 ID=MsG0780039272.01.T01:exon:16310;Parent=MsG0780039272.01.T01
Chr7 exon 61117617 61117690 61117617 ID=MsG0780039272.01.T01:exon:16309;Parent=MsG0780039272.01.T01
Chr7 exon 61118833 61119061 61118833 ID=MsG0780039272.01.T01:exon:16308;Parent=MsG0780039272.01.T01
Chr7 exon 61120011 61120078 61120011 ID=MsG0780039272.01.T01:exon:16307;Parent=MsG0780039272.01.T01
Chr7 five_prime_UTR 61120011 61120078 61120011 ID=MsG0780039272.01.T01:five_prime_utr;Parent=MsG0780039272.01.T01
Chr7 five_prime_UTR 61119045 61119061 61119045 ID=MsG0780039272.01.T01:five_prime_utr;Parent=MsG0780039272.01.T01
Chr7 CDS 61118833 61119044 61118833 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61117617 61117690 61117617 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61117313 61117437 61117313 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61116749 61116850 61116749 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61115810 61115878 61115810 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61115627 61115725 61115627 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 CDS 61115392 61115523 61115392 ID=MsG0780039272.01.T01:cds;Parent=MsG0780039272.01.T01
Chr7 three_prime_UTR 61115083 61115391 61115083 ID=MsG0780039272.01.T01:three_prime_utr;Parent=MsG0780039272.01.T01
Chr7 three_prime_UTR 61113430 61113453 61113430 ID=MsG0780039272.01.T01:three_prime_utr;Parent=MsG0780039272.01.T01
Gene Sequence

>MsG0780039272.01.T01

ATGGGGAAGAGAAAGCGAAGTGAAAAGGCTGAAGCTGAGGCCGTGCCCAAAAAGGAGGATGTTGCTCCAGAGAGACCAGTGAGGACCCTTTTGGGATGGAAGGATAAGAATGATAATGAGAATGAAATTGAGGCTAAGGATAATGGTGCTTCACCTGTATTCAGGAACAAAGAGAAAGTTTTGGTTACTTGCTCTAGGCGTATTGTTTACAGGAAGGCAAAAGATCTTTATCTCTGGATGGCAAAATGCCCCAACGGCCCGTCTGTTAAATTTTTAGTTAGTGCCGTGCACACAATGGAGGAATTGAAGCTTACTGGGAATCACCTAAAAGGCTCTCGTCCTCTTTTGACATTTTCATCAAATTTTGAAAAAGATGCATACTGGAAATTGTTGAAGGAGATGCTGTTACAGATATTTGAAACACCGAAGGACCACAGAAAGGCTAAGCCTTTCCATGACCACGTTTTTGTTTTCTCGATTGTTGATGACCATATATGGTTCCGAAATTACCAGATCTCTGTTCCTCACAATGAGTCAGACAAATTACCCCGTGGAAGCCTTGATAAAATGACATTGATTGAGGTTGGTCCACGGTTTTGCTTGAATCCGATTAAAATATTCGGTGGCAGTTTTGGAGGCCCGACTTTATATGAGAATCCACTCTACGTGTCGCCAAACCAGATCCGAGCTTTGCAGAAGAAGAAAAAGGCTGGAACGTTTGCAAAGAAGGTCAAAGCAAAGACAAGGAGGAAAATGCATGAGATGGCCAATCCTCTTGAGCCTGATGAGTTTGCTGATATGTGGAAAGATTAA
Protein sequence

>MsG0780039272.01.T01

MGKRKRSEKAEAEAVPKKEDVAPERPVRTLLGWKDKNDNENEIEAKDNGASPVFRNKEKVLVTCSRRIVYRKAKDLYLWMAKCPNGPSVKFLVSAVHTMEELKLTGNHLKGSRPLLTFSSNFEKDAYWKLLKEMLLQIFETPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVPHNESDKLPRGSLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALQKKKKAGTFAKKVKAKTRRKMHEMANPLEPDEFADMWKD*