Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025421.01.T01 | XP_003612737.2 | 98.27 | 289 | 5 | 0 | 17 | 305 | 1 | 289 | 0 | 572 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025421.01.T01 | Q9LUJ5 | 64.43 | 298 | 95 | 5 | 15 | 306 | 1 | 293 | 1.43E-124 | 360 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025421.01.T01 | G7KAW7 | 98.270 | 289 | 5 | 0 | 17 | 305 | 1 | 289 | 0.0 | 572 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048135.01 | MsG0580025421.01 | 0.823271 | 1.515160e-53 | 1.298432e-50 |
MsG0080048197.01 | MsG0580025421.01 | 0.812385 | 4.354371e-51 | 2.764678e-48 |
MsG0080048428.01 | MsG0580025421.01 | 0.803116 | 4.063558e-49 | 2.025164e-46 |
MsG0080048843.01 | MsG0580025421.01 | 0.823287 | 1.502386e-53 | 1.288067e-50 |
MsG0080048968.01 | MsG0580025421.01 | 0.880112 | 7.177154e-70 | 3.994455e-66 |
MsG0180000055.01 | MsG0580025421.01 | 0.817248 | 3.639186e-52 | 2.636430e-49 |
MsG0180000139.01 | MsG0580025421.01 | 0.801094 | 1.058883e-48 | 5.013517e-46 |
MsG0180000235.01 | MsG0580025421.01 | 0.805444 | 1.330925e-49 | 7.042406e-47 |
MsG0180000339.01 | MsG0580025421.01 | 0.833533 | 5.048937e-56 | 5.831049e-53 |
MsG0180000614.01 | MsG0580025421.01 | 0.821437 | 4.040163e-53 | 3.286795e-50 |
MsG0180000669.01 | MsG0580025421.01 | 0.805204 | 1.494697e-49 | 7.860330e-47 |
MsG0180000799.01 | MsG0580025421.01 | 0.864829 | 9.174158e-65 | 2.920281e-61 |
MsG0180000882.01 | MsG0580025421.01 | 0.849977 | 2.285822e-60 | 4.410412e-57 |
MsG0180001043.01 | MsG0580025421.01 | 0.866228 | 3.324133e-65 | 1.111993e-61 |
MsG0180001141.01 | MsG0580025421.01 | 0.863140 | 3.078006e-64 | 9.235126e-61 |
MsG0180001213.01 | MsG0580025421.01 | 0.876545 | 1.282065e-68 | 6.240078e-65 |
MsG0180001355.01 | MsG0580025421.01 | 0.821322 | 4.295087e-53 | 3.482968e-50 |
MsG0180001522.01 | MsG0580025421.01 | 0.800201 | 1.610539e-48 | 7.453896e-46 |
MsG0180002023.01 | MsG0580025421.01 | 0.888733 | 4.543671e-73 | 3.561773e-69 |
MsG0180002283.01 | MsG0580025421.01 | 0.854080 | 1.561600e-61 | 3.447395e-58 |
MsG0180002458.01 | MsG0580025421.01 | 0.874071 | 8.993596e-68 | 3.992800e-64 |
MsG0180002489.01 | MsG0580025421.01 | 0.833976 | 3.913352e-56 | 4.580665e-53 |
MsG0180002491.01 | MsG0580025421.01 | 0.827460 | 1.545960e-54 | 1.493502e-51 |
MsG0180002750.01 | MsG0580025421.01 | -0.805093 | 1.576226e-49 | 8.265554e-47 |
MsG0180003073.01 | MsG0580025421.01 | 0.882140 | 1.337364e-70 | 8.052085e-67 |
MsG0180003097.01 | MsG0580025421.01 | 0.877614 | 5.454506e-69 | 2.759924e-65 |
MsG0180003113.01 | MsG0580025421.01 | 0.824300 | 8.699982e-54 | 7.675012e-51 |
MsG0180003117.01 | MsG0580025421.01 | 0.833812 | 4.301976e-56 | 5.010384e-53 |
MsG0180003302.01 | MsG0580025421.01 | 0.810675 | 1.024418e-50 | 6.214399e-48 |
MsG0180003627.01 | MsG0580025421.01 | 0.826696 | 2.354864e-54 | 2.224663e-51 |
MsG0180003793.01 | MsG0580025421.01 | 0.839977 | 1.147451e-57 | 1.611443e-54 |
MsG0180003854.01 | MsG0580025421.01 | 0.868052 | 8.692687e-66 | 3.101235e-62 |
MsG0180004016.01 | MsG0580025421.01 | 0.835247 | 1.875418e-56 | 2.280486e-53 |
MsG0180004129.01 | MsG0580025421.01 | 0.843542 | 1.314194e-58 | 2.062943e-55 |
MsG0180004130.01 | MsG0580025421.01 | 0.878072 | 3.773528e-69 | 1.942813e-65 |
MsG0180004151.01 | MsG0580025421.01 | 0.813903 | 2.021886e-51 | 1.337141e-48 |
MsG0180004152.01 | MsG0580025421.01 | 0.806350 | 8.583114e-50 | 4.648206e-47 |
MsG0180004162.01 | MsG0580025421.01 | 0.824411 | 8.190466e-54 | 7.248654e-51 |
MsG0180004481.01 | MsG0580025421.01 | 0.801372 | 9.290051e-49 | 4.429228e-46 |
MsG0180004509.01 | MsG0580025421.01 | 0.819377 | 1.199229e-52 | 9.211939e-50 |
MsG0180004548.01 | MsG0580025421.01 | 0.800725 | 1.259355e-48 | 5.906734e-46 |
MsG0180004767.01 | MsG0580025421.01 | 0.823880 | 1.091370e-53 | 9.515831e-51 |
MsG0180004780.01 | MsG0580025421.01 | 0.859480 | 4.018265e-63 | 1.062767e-59 |
MsG0180004886.01 | MsG0580025421.01 | -0.824306 | 8.670378e-54 | 7.650256e-51 |
MsG0180004915.01 | MsG0580025421.01 | 0.871697 | 5.607232e-67 | 2.283261e-63 |
MsG0180004991.01 | MsG0580025421.01 | 0.809546 | 1.794166e-50 | 1.056436e-47 |
MsG0180005125.01 | MsG0580025421.01 | 0.830055 | 3.643259e-55 | 3.795960e-52 |
MsG0180005382.01 | MsG0580025421.01 | 0.849885 | 2.426470e-60 | 4.667705e-57 |
MsG0180005436.01 | MsG0580025421.01 | 0.857360 | 1.720800e-62 | 4.236228e-59 |
MsG0180005851.01 | MsG0580025421.01 | 0.880160 | 6.900525e-70 | 3.846984e-66 |
MsG0180005944.01 | MsG0580025421.01 | 0.803392 | 3.563583e-49 | 1.788645e-46 |
MsG0180005957.01 | MsG0580025421.01 | 0.888981 | 3.643614e-73 | 2.885568e-69 |
MsG0180006013.01 | MsG0580025421.01 | 0.852837 | 3.551087e-61 | 7.519028e-58 |
MsG0180006016.01 | MsG0580025421.01 | 0.831537 | 1.578118e-55 | 1.717709e-52 |
MsG0180006143.01 | MsG0580025421.01 | 0.890185 | 1.237921e-73 | 1.030014e-69 |
MsG0280006327.01 | MsG0580025421.01 | 0.821174 | 4.644865e-53 | 3.751337e-50 |
MsG0280006406.01 | MsG0580025421.01 | 0.923614 | 2.105054e-89 | 8.509684e-85 |
MsG0280006411.01 | MsG0580025421.01 | 0.829511 | 4.942783e-55 | 5.069359e-52 |
MsG0280006422.01 | MsG0580025421.01 | 0.825238 | 5.225811e-54 | 4.736386e-51 |
MsG0280006424.01 | MsG0580025421.01 | 0.804753 | 1.857079e-49 | 9.653861e-47 |
MsG0280010801.01 | MsG0580025421.01 | 0.815417 | 9.346651e-52 | 6.440138e-49 |
MsG0280011120.01 | MsG0580025421.01 | -0.828385 | 9.257606e-55 | 9.188037e-52 |
MsG0280011141.01 | MsG0580025421.01 | 0.849872 | 2.446008e-60 | 4.703281e-57 |
MsG0280011387.01 | MsG0580025421.01 | 0.864616 | 1.070073e-64 | 3.381199e-61 |
MsG0380011614.01 | MsG0580025421.01 | 0.816315 | 5.891225e-52 | 4.160641e-49 |
MsG0380011659.01 | MsG0580025421.01 | 0.834388 | 3.084318e-56 | 3.654828e-53 |
MsG0380011704.01 | MsG0580025421.01 | 0.825643 | 4.191433e-54 | 3.842826e-51 |
MsG0380012073.01 | MsG0580025421.01 | 0.815787 | 7.730233e-52 | 5.381149e-49 |
MsG0380012108.01 | MsG0580025421.01 | 0.862112 | 6.380363e-64 | 1.847203e-60 |
MsG0380012250.01 | MsG0580025421.01 | 0.818781 | 1.638223e-52 | 1.237973e-49 |
MsG0380012310.01 | MsG0580025421.01 | 0.863272 | 2.801675e-64 | 8.445132e-61 |
MsG0380012566.01 | MsG0580025421.01 | 0.898897 | 3.379937e-77 | 4.078117e-73 |
MsG0380012661.01 | MsG0580025421.01 | -0.809668 | 1.688421e-50 | 9.974524e-48 |
MsG0380013178.01 | MsG0580025421.01 | 0.824658 | 7.164671e-54 | 6.387312e-51 |
MsG0380014276.01 | MsG0580025421.01 | 0.927892 | 6.228455e-92 | 3.186780e-87 |
MsG0380014330.01 | MsG0580025421.01 | 0.821936 | 3.097969e-53 | 2.556018e-50 |
MsG0380014577.01 | MsG0580025421.01 | 0.921456 | 3.496187e-88 | 1.252598e-83 |
MsG0380014647.01 | MsG0580025421.01 | 0.815144 | 1.074499e-51 | 7.348280e-49 |
MsG0380014680.01 | MsG0580025421.01 | 0.817951 | 2.525967e-52 | 1.865544e-49 |
MsG0380014770.01 | MsG0580025421.01 | 0.801196 | 1.009211e-48 | 4.790264e-46 |
MsG0380014885.01 | MsG0580025421.01 | 0.853177 | 2.838848e-61 | 6.080156e-58 |
MsG0380014908.01 | MsG0580025421.01 | 0.838082 | 3.552623e-57 | 4.706596e-54 |
MsG0480018461.01 | MsG0580025421.01 | 0.821902 | 3.154652e-53 | 2.600405e-50 |
MsG0480018477.01 | MsG0580025421.01 | 0.840776 | 7.090374e-58 | 1.020662e-54 |
MsG0480018906.01 | MsG0580025421.01 | 0.821006 | 5.079119e-53 | 4.083253e-50 |
MsG0480018970.01 | MsG0580025421.01 | 0.812043 | 5.169427e-51 | 3.251686e-48 |
MsG0480019373.01 | MsG0580025421.01 | 0.875558 | 2.802385e-68 | 1.314396e-64 |
MsG0480019486.01 | MsG0580025421.01 | 0.840664 | 7.589369e-58 | 1.088618e-54 |
MsG0480020372.01 | MsG0580025421.01 | 0.811206 | 7.863314e-51 | 4.837678e-48 |
MsG0480020445.01 | MsG0580025421.01 | 0.830136 | 3.480402e-55 | 3.635068e-52 |
MsG0480020843.01 | MsG0580025421.01 | 0.832951 | 7.049232e-56 | 8.000664e-53 |
MsG0480020959.01 | MsG0580025421.01 | 0.819532 | 1.105312e-52 | 8.528431e-50 |
MsG0480021006.01 | MsG0580025421.01 | 0.842772 | 2.107662e-58 | 3.229030e-55 |
MsG0480021034.01 | MsG0580025421.01 | 0.846982 | 1.541926e-59 | 2.700858e-56 |
MsG0480021164.01 | MsG0580025421.01 | 0.877880 | 4.407319e-69 | 2.253167e-65 |
MsG0480021448.01 | MsG0580025421.01 | 0.818412 | 1.986716e-52 | 1.486207e-49 |
MsG0480021731.01 | MsG0580025421.01 | 0.807886 | 4.059613e-50 | 2.287604e-47 |
MsG0480021832.01 | MsG0580025421.01 | 0.805984 | 1.025245e-49 | 5.500909e-47 |
MsG0480021883.01 | MsG0580025421.01 | 0.802931 | 4.437696e-49 | 2.201256e-46 |
MsG0480021904.01 | MsG0580025421.01 | 0.945492 | 2.760584e-104 | 4.242135e-99 |
MsG0480021945.01 | MsG0580025421.01 | 0.836985 | 6.785656e-57 | 8.693615e-54 |
MsG0480021994.01 | MsG0580025421.01 | 0.893033 | 9.154284e-75 | 8.578940e-71 |
MsG0480022035.01 | MsG0580025421.01 | 0.816942 | 4.263700e-52 | 3.063432e-49 |
MsG0480022052.01 | MsG0580025421.01 | -0.804852 | 1.770838e-49 | 9.229076e-47 |
MsG0480022164.01 | MsG0580025421.01 | 0.813661 | 2.285638e-51 | 1.501705e-48 |
MsG0480022222.01 | MsG0580025421.01 | 0.814473 | 1.513242e-51 | 1.016394e-48 |
MsG0480022252.01 | MsG0580025421.01 | 0.828144 | 1.058715e-54 | 1.043358e-51 |
MsG0480022493.01 | MsG0580025421.01 | 0.838753 | 2.384356e-57 | 3.224354e-54 |
MsG0480022678.01 | MsG0580025421.01 | 0.804106 | 2.532961e-49 | 1.294921e-46 |
MsG0480022768.01 | MsG0580025421.01 | 0.800897 | 1.161792e-48 | 5.473225e-46 |
MsG0480022791.01 | MsG0580025421.01 | 0.888847 | 4.104481e-73 | 3.232702e-69 |
MsG0480022965.01 | MsG0580025421.01 | 0.810325 | 1.219482e-50 | 7.328824e-48 |
MsG0480023088.01 | MsG0580025421.01 | 0.821982 | 3.021925e-53 | 2.496564e-50 |
MsG0480023149.01 | MsG0580025421.01 | 0.844525 | 7.165204e-59 | 1.159960e-55 |
MsG0480023159.01 | MsG0580025421.01 | 0.807617 | 4.630851e-50 | 2.591282e-47 |
MsG0480023174.01 | MsG0580025421.01 | 0.855098 | 7.924037e-62 | 1.808688e-58 |
MsG0480023258.01 | MsG0580025421.01 | 0.847054 | 1.474257e-59 | 2.588310e-56 |
MsG0480023282.01 | MsG0580025421.01 | 0.886038 | 4.842006e-72 | 3.402198e-68 |
MsG0480023361.01 | MsG0580025421.01 | 0.812142 | 4.919727e-51 | 3.103228e-48 |
MsG0480023378.01 | MsG0580025421.01 | 0.824305 | 8.673334e-54 | 7.652725e-51 |
MsG0480023412.01 | MsG0580025421.01 | 0.820582 | 6.355589e-53 | 5.048631e-50 |
MsG0480023415.01 | MsG0580025421.01 | 0.883861 | 3.135424e-71 | 2.022226e-67 |
MsG0480023500.01 | MsG0580025421.01 | 0.805289 | 1.434663e-49 | 7.561021e-47 |
MsG0480023517.01 | MsG0580025421.01 | 0.836245 | 1.047535e-56 | 1.312714e-53 |
MsG0480023707.01 | MsG0580025421.01 | 0.803523 | 3.347640e-49 | 1.686028e-46 |
MsG0480023744.01 | MsG0580025421.01 | 0.822045 | 2.921682e-53 | 2.418083e-50 |
MsG0480023814.01 | MsG0580025421.01 | 0.804077 | 2.568534e-49 | 1.312162e-46 |
MsG0480023968.01 | MsG0580025421.01 | 0.829431 | 5.167168e-55 | 5.287421e-52 |
MsG0580024165.01 | MsG0580025421.01 | 0.845038 | 5.209177e-59 | 8.571088e-56 |
MsG0580024353.01 | MsG0580025421.01 | 0.800020 | 1.753268e-48 | 8.077359e-46 |
MsG0580024374.01 | MsG0580025421.01 | 0.818725 | 1.687162e-52 | 1.272940e-49 |
MsG0580024390.01 | MsG0580025421.01 | 0.905042 | 6.513690e-80 | 1.034792e-75 |
MsG0580024458.01 | MsG0580025421.01 | -0.841125 | 5.744786e-58 | 8.358598e-55 |
MsG0580024510.01 | MsG0580025421.01 | 0.844354 | 7.964696e-59 | 1.282405e-55 |
MsG0580024512.01 | MsG0580025421.01 | 0.866352 | 3.035706e-65 | 1.020081e-61 |
MsG0580024536.01 | MsG0580025421.01 | 0.824688 | 7.048134e-54 | 6.288920e-51 |
MsG0580024874.01 | MsG0580025421.01 | 0.817783 | 2.756735e-52 | 2.026738e-49 |
MsG0580024946.01 | MsG0580025421.01 | 0.810348 | 1.205466e-50 | 7.248993e-48 |
MsG0580024974.01 | MsG0580025421.01 | 0.812847 | 3.450840e-51 | 2.217701e-48 |
MsG0580025089.01 | MsG0580025421.01 | 0.820577 | 6.372105e-53 | 5.061189e-50 |
MsG0580025134.01 | MsG0580025421.01 | 0.862363 | 5.344196e-64 | 1.560992e-60 |
MsG0580025296.01 | MsG0580025421.01 | 0.827235 | 1.750178e-54 | 1.679676e-51 |
MsG0580025328.01 | MsG0580025421.01 | 0.808600 | 2.860642e-50 | 1.642527e-47 |
MsG0580025400.01 | MsG0580025421.01 | 0.917359 | 5.844223e-86 | 1.681009e-81 |
MsG0580025412.01 | MsG0580025421.01 | 0.807765 | 4.307142e-50 | 2.419510e-47 |
MsG0580025421.01 | MsG0580025448.01 | 0.814277 | 1.672543e-51 | 1.117372e-48 |
MsG0580025421.01 | MsG0580025621.01 | 0.800916 | 1.151305e-48 | 5.426450e-46 |
MsG0580025421.01 | MsG0580025651.01 | 0.830218 | 3.323004e-55 | 3.479024e-52 |
MsG0580025421.01 | MsG0580027034.01 | 0.824425 | 8.126461e-54 | 7.195109e-51 |
MsG0580025421.01 | MsG0580027043.01 | 0.849968 | 2.299776e-60 | 4.436139e-57 |
MsG0580025421.01 | MsG0580027319.01 | -0.842029 | 3.318262e-58 | 4.966625e-55 |
MsG0580025421.01 | MsG0580027441.01 | 0.840528 | 8.235032e-58 | 1.176342e-54 |
MsG0580025421.01 | MsG0580028072.01 | 0.838432 | 2.885234e-57 | 3.863913e-54 |
MsG0580025421.01 | MsG0580028606.01 | 0.843976 | 1.005855e-58 | 1.600569e-55 |
MsG0580025421.01 | MsG0580029283.01 | 0.899046 | 2.919002e-77 | 3.546390e-73 |
MsG0580025421.01 | MsG0580029300.01 | 0.845673 | 3.506636e-59 | 5.888780e-56 |
MsG0580025421.01 | MsG0580029594.01 | 0.806560 | 7.753846e-50 | 4.221764e-47 |
MsG0580025421.01 | MsG0580029629.01 | 0.804251 | 2.363109e-49 | 1.212511e-46 |
MsG0580025421.01 | MsG0580029783.01 | 0.879397 | 1.288669e-69 | 6.975991e-66 |
MsG0580025421.01 | MsG0580029952.01 | 0.881888 | 1.649664e-70 | 9.835533e-67 |
MsG0580025421.01 | MsG0580030003.01 | 0.802192 | 6.303448e-49 | 3.068360e-46 |
MsG0580025421.01 | MsG0580030160.01 | 0.810661 | 1.031385e-50 | 6.254375e-48 |
MsG0580025421.01 | MsG0580030204.01 | 0.812592 | 3.924127e-51 | 2.505183e-48 |
MsG0580025421.01 | MsG0580030235.01 | 0.810702 | 1.010580e-50 | 6.134932e-48 |
MsG0580025421.01 | MsG0680030285.01 | 0.839617 | 1.423498e-57 | 1.976603e-54 |
MsG0580025421.01 | MsG0680030351.01 | 0.868329 | 7.079787e-66 | 2.550735e-62 |
MsG0580025421.01 | MsG0680030414.01 | 0.889390 | 2.529270e-73 | 2.036511e-69 |
MsG0580025421.01 | MsG0680031051.01 | 0.822412 | 2.402151e-53 | 2.009223e-50 |
MsG0580025421.01 | MsG0680031243.01 | 0.867460 | 1.346056e-65 | 4.703601e-62 |
MsG0580025421.01 | MsG0680031538.01 | 0.808203 | 3.475822e-50 | 1.975253e-47 |
MsG0580025421.01 | MsG0680031651.01 | 0.823368 | 1.438147e-53 | 1.235727e-50 |
MsG0580025421.01 | MsG0680031820.01 | 0.832252 | 1.050808e-55 | 1.167947e-52 |
MsG0580025421.01 | MsG0680031822.01 | 0.872986 | 2.084941e-67 | 8.899469e-64 |
MsG0580025421.01 | MsG0680032430.01 | 0.914836 | 1.200421e-84 | 3.044504e-80 |
MsG0580025421.01 | MsG0680033391.01 | 0.816756 | 4.692300e-52 | 3.354019e-49 |
MsG0580025421.01 | MsG0680033619.01 | 0.802096 | 6.596982e-49 | 3.203509e-46 |
MsG0580025421.01 | MsG0680034061.01 | 0.852895 | 3.418842e-61 | 7.252295e-58 |
MsG0580025421.01 | MsG0680034219.01 | 0.821319 | 4.301056e-53 | 3.487522e-50 |
MsG0580025421.01 | MsG0680034395.01 | 0.831963 | 1.239198e-55 | 1.365880e-52 |
MsG0580025421.01 | MsG0680035278.01 | 0.841099 | 5.833001e-58 | 8.480037e-55 |
MsG0580025421.01 | MsG0680035306.01 | 0.802865 | 4.579259e-49 | 2.267727e-46 |
MsG0580025421.01 | MsG0680035582.01 | 0.845906 | 3.032498e-59 | 5.131054e-56 |
MsG0580025421.01 | MsG0680035704.01 | 0.828179 | 1.037802e-54 | 1.023833e-51 |
MsG0580025421.01 | MsG0680035848.01 | 0.803476 | 3.422943e-49 | 1.721806e-46 |
MsG0580025421.01 | MsG0680035854.01 | 0.918444 | 1.546263e-86 | 4.706691e-82 |
MsG0580025421.01 | MsG0780036139.01 | 0.813996 | 1.928670e-51 | 1.278681e-48 |
MsG0580025421.01 | MsG0780036240.01 | 0.884730 | 1.493390e-71 | 9.965621e-68 |
MsG0580025421.01 | MsG0780036247.01 | -0.812857 | 3.432258e-51 | 2.206384e-48 |
MsG0580025421.01 | MsG0780036609.01 | 0.801306 | 9.581384e-49 | 4.560576e-46 |
MsG0580025421.01 | MsG0780036705.01 | 0.821689 | 3.532976e-53 | 2.894656e-50 |
MsG0580025421.01 | MsG0780036813.01 | 0.870865 | 1.056584e-66 | 4.174530e-63 |
MsG0580025421.01 | MsG0780037503.01 | 0.805971 | 1.031517e-49 | 5.532680e-47 |
MsG0580025421.01 | MsG0780038400.01 | 0.836594 | 8.537809e-57 | 1.080958e-53 |
MsG0580025421.01 | MsG0780038443.01 | 0.803659 | 3.137342e-49 | 1.585504e-46 |
MsG0580025421.01 | MsG0780038495.01 | 0.803125 | 4.046072e-49 | 2.016924e-46 |
MsG0580025421.01 | MsG0780038565.01 | 0.817414 | 3.338327e-52 | 2.429678e-49 |
MsG0580025421.01 | MsG0780038645.01 | 0.860878 | 1.519082e-63 | 4.215555e-60 |
MsG0580025421.01 | MsG0780039258.01 | 0.833558 | 4.976353e-56 | 5.751667e-53 |
MsG0580025421.01 | MsG0780039289.01 | 0.808715 | 2.702769e-50 | 1.556492e-47 |
MsG0580025421.01 | MsG0780039340.01 | 0.853859 | 1.808354e-61 | 3.962727e-58 |
MsG0580025421.01 | MsG0780039570.01 | 0.817964 | 2.509471e-52 | 1.853987e-49 |
MsG0580025421.01 | MsG0780039841.01 | 0.804498 | 2.099175e-49 | 1.083958e-46 |
MsG0580025421.01 | MsG0780039943.01 | 0.835254 | 1.867881e-56 | 2.271748e-53 |
MsG0580025421.01 | MsG0780040125.01 | 0.808297 | 3.319403e-50 | 1.890972e-47 |
MsG0580025421.01 | MsG0780040338.01 | 0.883607 | 3.888768e-71 | 2.483015e-67 |
MsG0580025421.01 | MsG0780040445.01 | 0.878496 | 2.679767e-69 | 1.402340e-65 |
MsG0580025421.01 | MsG0780040718.01 | 0.804712 | 1.893413e-49 | 9.832075e-47 |
MsG0580025421.01 | MsG0780040856.01 | 0.827291 | 1.696310e-54 | 1.630716e-51 |
MsG0580025421.01 | MsG0780040861.01 | 0.892498 | 1.501786e-74 | 1.377101e-70 |
MsG0580025421.01 | MsG0780041137.01 | 0.805483 | 1.306071e-49 | 6.917848e-47 |
MsG0580025421.01 | MsG0780041161.01 | 0.806246 | 9.030023e-50 | 4.877502e-47 |
MsG0580025421.01 | MsG0780041165.01 | 0.813247 | 2.818993e-51 | 1.831257e-48 |
MsG0580025421.01 | MsG0780041223.01 | 0.812516 | 4.076293e-51 | 2.597198e-48 |
MsG0580025421.01 | MsG0780041294.01 | 0.894656 | 2.007619e-75 | 2.014724e-71 |
MsG0580025421.01 | MsG0780041295.01 | 0.877994 | 4.018692e-69 | 2.063270e-65 |
MsG0580025421.01 | MsG0780041345.01 | 0.889806 | 1.741323e-73 | 1.426267e-69 |
MsG0580025421.01 | MsG0780041402.01 | 0.806978 | 6.324670e-50 | 3.480895e-47 |
MsG0580025421.01 | MsG0780041462.01 | 0.836182 | 1.086953e-56 | 1.359516e-53 |
MsG0580025421.01 | MsG0780041555.01 | 0.849848 | 2.484283e-60 | 4.773028e-57 |
MsG0580025421.01 | MsG0780041559.01 | 0.834599 | 2.730047e-56 | 3.255536e-53 |
MsG0580025421.01 | MsG0880042232.01 | 0.809806 | 1.577483e-50 | 9.352843e-48 |
MsG0580025421.01 | MsG0880042294.01 | 0.867280 | 1.537636e-65 | 5.337905e-62 |
MsG0580025421.01 | MsG0880042314.01 | 0.875040 | 4.213016e-68 | 1.939439e-64 |
MsG0580025421.01 | MsG0880042404.01 | 0.872536 | 2.949247e-67 | 1.238819e-63 |
MsG0580025421.01 | MsG0880042519.01 | 0.809847 | 1.545340e-50 | 9.172200e-48 |
MsG0580025421.01 | MsG0880042604.01 | 0.829837 | 4.115731e-55 | 4.262508e-52 |
MsG0580025421.01 | MsG0880042663.01 | 0.818640 | 1.764147e-52 | 1.327834e-49 |
MsG0580025421.01 | MsG0880042915.01 | 0.813814 | 2.115624e-51 | 1.395767e-48 |
MsG0580025421.01 | MsG0880043002.01 | 0.816216 | 6.201317e-52 | 4.367668e-49 |
MsG0580025421.01 | MsG0880043082.01 | 0.846644 | 1.907878e-59 | 3.306088e-56 |
MsG0580025421.01 | MsG0880043163.01 | 0.833122 | 6.392780e-56 | 7.293688e-53 |
MsG0580025421.01 | MsG0880043592.01 | 0.827380 | 1.615663e-54 | 1.557354e-51 |
MsG0580025421.01 | MsG0880043835.01 | 0.800852 | 1.186477e-48 | 5.583111e-46 |
MsG0580025421.01 | MsG0880045106.01 | 0.813319 | 2.717971e-51 | 1.769219e-48 |
MsG0580025421.01 | MsG0880045133.01 | 0.806789 | 6.936448e-50 | 3.798844e-47 |
MsG0580025421.01 | MsG0880045535.01 | 0.806757 | 7.044003e-50 | 3.854574e-47 |
MsG0580025421.01 | MsG0880045619.01 | 0.805520 | 1.282846e-49 | 6.801059e-47 |
MsG0580025421.01 | MsG0880045631.01 | 0.858147 | 1.006005e-62 | 2.542538e-59 |
MsG0580025421.01 | MsG0880045653.01 | 0.807113 | 5.923418e-50 | 3.271362e-47 |
MsG0580025421.01 | MsG0880046058.01 | 0.847298 | 1.263788e-59 | 2.235934e-56 |
MsG0580025421.01 | MsG0880046177.01 | 0.869675 | 2.591347e-66 | 9.807318e-63 |
MsG0580025421.01 | MsG0880046253.01 | 0.806790 | 6.932673e-50 | 3.796944e-47 |
MsG0580025421.01 | MsG0880046285.01 | 0.899125 | 2.701471e-77 | 3.293937e-73 |
MsG0580025421.01 | MsG0880046321.01 | 0.940367 | 2.635726e-100 | 2.873379e-95 |
MsG0580025421.01 | MsG0880046328.01 | 0.931212 | 5.270883e-94 | 3.278400e-89 |
MsG0580025421.01 | MsG0880046575.01 | 0.894336 | 2.713476e-75 | 2.686398e-71 |
MsG0580025421.01 | MsG0880046631.01 | 0.814524 | 1.474930e-51 | 9.919964e-49 |
MsG0580025421.01 | MsG0880046647.01 | 0.874354 | 7.210783e-68 | 3.235745e-64 |
MsG0580025421.01 | MsG0880046933.01 | 0.881582 | 2.128802e-70 | 1.254273e-66 |
MsG0580025421.01 | MsG0880046973.01 | 0.823313 | 1.481818e-53 | 1.271356e-50 |
MsG0580025421.01 | MsG0880047016.01 | 0.823378 | 1.430657e-53 | 1.229626e-50 |
MsG0580025421.01 | MsG0880047019.01 | 0.842193 | 3.002105e-58 | 4.516335e-55 |
MsG0580025421.01 | MsG0880047038.01 | 0.884656 | 1.591091e-71 | 1.058807e-67 |
MsG0580025421.01 | MsG0880047116.01 | 0.913848 | 3.818960e-84 | 9.213691e-80 |
MsG0580025421.01 | MsG0880047120.01 | 0.825886 | 3.669943e-54 | 3.388279e-51 |
MsG0580025421.01 | MsG0880047143.01 | 0.816151 | 6.410513e-52 | 4.507032e-49 |
MsG0580025421.01 | MsG0880047192.01 | 0.800999 | 1.107142e-48 | 5.229506e-46 |
MsG0580025421.01 | MsG0880047286.01 | 0.857591 | 1.470901e-62 | 3.649358e-59 |
MsG0580025421.01 | MsG0880047427.01 | 0.877105 | 8.203235e-69 | 4.075465e-65 |
MsG0580025421.01 | MsG0880047428.01 | 0.884230 | 2.289695e-71 | 1.498919e-67 |
MsG0580025421.01 | MsG0880047448.01 | 0.875533 | 2.858973e-68 | 1.339588e-64 |
MsG0580025421.01 | MsG0880047607.01 | 0.886725 | 2.662684e-72 | 1.924111e-68 |
MsG0580025421.01 | MsG0880047608.01 | 0.825833 | 3.778436e-54 | 3.483019e-51 |
MsG0380015027.01 | MsG0580025421.01 | 0.835795 | 1.362623e-56 | 1.684178e-53 |
MsG0380015164.01 | MsG0580025421.01 | 0.833921 | 4.038874e-56 | 4.719790e-53 |
MsG0380015779.01 | MsG0580025421.01 | 0.843985 | 1.000396e-58 | 1.592330e-55 |
MsG0380015793.01 | MsG0580025421.01 | -0.805218 | 1.484297e-49 | 7.808408e-47 |
MsG0380015818.01 | MsG0580025421.01 | 0.850118 | 2.087987e-60 | 4.047122e-57 |
MsG0380015831.01 | MsG0580025421.01 | 0.809702 | 1.660243e-50 | 9.816675e-48 |
MsG0380016906.01 | MsG0580025421.01 | 0.812140 | 4.924397e-51 | 3.105995e-48 |
MsG0380016971.01 | MsG0580025421.01 | 0.821791 | 3.346602e-53 | 2.749902e-50 |
MsG0380016974.01 | MsG0580025421.01 | 0.818913 | 1.528934e-52 | 1.159686e-49 |
MsG0380017003.01 | MsG0580025421.01 | 0.824348 | 8.474589e-54 | 7.486724e-51 |
MsG0380017044.01 | MsG0580025421.01 | 0.833237 | 5.986218e-56 | 6.852406e-53 |
MsG0380017146.01 | MsG0580025421.01 | 0.848705 | 5.168240e-60 | 9.567735e-57 |
MsG0380017226.01 | MsG0580025421.01 | 0.818152 | 2.274925e-52 | 1.689485e-49 |
MsG0380017286.01 | MsG0580025421.01 | 0.805407 | 1.354758e-49 | 7.161801e-47 |
MsG0380017429.01 | MsG0580025421.01 | 0.821111 | 4.802690e-53 | 3.872021e-50 |
MsG0380017604.01 | MsG0580025421.01 | 0.804154 | 2.475542e-49 | 1.267127e-46 |
MsG0380017631.01 | MsG0580025421.01 | 0.816311 | 5.902700e-52 | 4.168369e-49 |
MsG0380017680.01 | MsG0580025421.01 | 0.820675 | 6.051908e-53 | 4.819794e-50 |
MsG0380017788.01 | MsG0580025421.01 | 0.840700 | 7.423951e-58 | 1.066141e-54 |
MsG0380017864.01 | MsG0580025421.01 | 0.866044 | 3.801910e-65 | 1.263711e-61 |
MsG0380017866.01 | MsG0580025421.01 | 0.827054 | 1.933499e-54 | 1.845722e-51 |
MsG0380018001.01 | MsG0580025421.01 | 0.803561 | 3.286800e-49 | 1.657042e-46 |
MsG0380018009.01 | MsG0580025421.01 | 0.828269 | 9.876404e-55 | 9.767940e-52 |
MsG0480018163.01 | MsG0580025421.01 | 0.823542 | 1.309683e-53 | 1.130947e-50 |
MsG0480018252.01 | MsG0580025421.01 | 0.803027 | 4.239336e-49 | 2.107987e-46 |
MsG0480018289.01 | MsG0580025421.01 | 0.835964 | 1.234778e-56 | 1.533923e-53 |
MsG0280006595.01 | MsG0580025421.01 | 0.831979 | 1.227712e-55 | 1.353914e-52 |
MsG0280006708.01 | MsG0580025421.01 | 0.808154 | 3.560143e-50 | 2.020535e-47 |
MsG0280007161.01 | MsG0580025421.01 | 0.826324 | 2.888354e-54 | 2.699947e-51 |
MsG0280007222.01 | MsG0580025421.01 | 0.889684 | 1.942202e-73 | 1.582960e-69 |
MsG0280007585.01 | MsG0580025421.01 | 0.806691 | 7.274218e-50 | 3.973779e-47 |
MsG0280007609.01 | MsG0580025421.01 | 0.828886 | 7.004065e-55 | 7.052506e-52 |
MsG0280007636.01 | MsG0580025421.01 | 0.810428 | 1.158493e-50 | 6.981165e-48 |
MsG0280007690.01 | MsG0580025421.01 | 0.866253 | 3.263129e-65 | 1.092699e-61 |
MsG0280008037.01 | MsG0580025421.01 | 0.851993 | 6.177610e-61 | 1.272431e-57 |
MsG0280008118.01 | MsG0580025421.01 | 0.810520 | 1.106583e-50 | 6.684814e-48 |
MsG0280008239.01 | MsG0580025421.01 | 0.839947 | 1.167832e-57 | 1.638450e-54 |
MsG0280008283.01 | MsG0580025421.01 | 0.806150 | 9.457840e-50 | 5.096020e-47 |
MsG0280008286.01 | MsG0580025421.01 | 0.833927 | 4.025707e-56 | 4.705171e-53 |
MsG0280008502.01 | MsG0580025421.01 | 0.801183 | 1.015217e-48 | 4.817279e-46 |
MsG0280008556.01 | MsG0580025421.01 | 0.802294 | 6.005939e-49 | 2.931342e-46 |
MsG0280008613.01 | MsG0580025421.01 | 0.851401 | 9.089518e-61 | 1.837695e-57 |
MsG0280008696.01 | MsG0580025421.01 | 0.810461 | 1.139786e-50 | 6.874418e-48 |
MsG0280008907.01 | MsG0580025421.01 | 0.804676 | 1.926947e-49 | 9.996512e-47 |
MsG0280008971.01 | MsG0580025421.01 | 0.801870 | 7.340571e-49 | 3.544326e-46 |
MsG0280009141.01 | MsG0580025421.01 | 0.827326 | 1.664058e-54 | 1.601425e-51 |
MsG0280009230.01 | MsG0580025421.01 | 0.918942 | 8.352781e-87 | 2.614267e-82 |
MsG0280009235.01 | MsG0580025421.01 | 0.821413 | 4.091880e-53 | 3.326644e-50 |
MsG0280009375.01 | MsG0580025421.01 | 0.851149 | 1.070808e-60 | 2.147129e-57 |
MsG0280009441.01 | MsG0580025421.01 | 0.803070 | 4.154053e-49 | 2.067774e-46 |
MsG0280009716.01 | MsG0580025421.01 | 0.951928 | 7.221187e-110 | 1.709913e-104 |
MsG0280010013.01 | MsG0580025421.01 | 0.809453 | 1.878453e-50 | 1.103298e-47 |
MsG0280010205.01 | MsG0580025421.01 | 0.808727 | 2.686866e-50 | 1.547845e-47 |
MsG0280010275.01 | MsG0580025421.01 | -0.857784 | 1.288938e-62 | 3.218037e-59 |
MsG0280010276.01 | MsG0580025421.01 | -0.864244 | 1.397923e-64 | 4.359489e-61 |
MsG0280010416.01 | MsG0580025421.01 | 0.811674 | 6.220814e-51 | 3.874459e-48 |
MsG0280010423.01 | MsG0580025421.01 | -0.825749 | 3.955397e-54 | 3.637532e-51 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0880042050.01 | MsG0580025421.01 | PPI |
MsG0280009716.01 | MsG0580025421.01 | PPI |
MsG0580025421.01 | MsG0180003409.01 | PPI |
MsG0580025421.01 | MsG0480020134.01 | PPI |
MsG0580025421.01 | MsG0180005851.01 | PPI |
MsG0580025421.01 | MsG0180005851.01 | PPI |
MsG0580029283.01 | MsG0580025421.01 | PPI |
MsG0780039272.01 | MsG0580025421.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025421.01.T01 | MTR_5g028350 | 98.270 | 289 | 5 | 0 | 17 | 305 | 1 | 289 | 0.0 | 572 |
MsG0580025421.01.T01 | MTR_8g075400 | 76.897 | 290 | 36 | 4 | 17 | 305 | 14 | 273 | 4.14e-138 | 392 |
MsG0580025421.01.T01 | MTR_8g075400 | 87.946 | 224 | 25 | 1 | 17 | 240 | 1 | 222 | 1.90e-128 | 367 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025421.01.T01 | AT3G22660 | 64.430 | 298 | 95 | 5 | 15 | 306 | 1 | 293 | 1.46e-125 | 360 |
Find 82 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGCCTCCAAAACCAAATT+TGG | 0.189093 | 5:+18339088 | None:intergenic |
GCTGAAACAACTAATGATTT+TGG | 0.204488 | 5:-18339041 | MsG0580025421.01.T01:CDS |
GATACTAAGAATGCCAAATT+TGG | 0.209577 | 5:-18339101 | MsG0580025421.01.T01:CDS |
GTTAAGTTGATAAACTTTAT+TGG | 0.245084 | 5:-18338884 | MsG0580025421.01.T01:three_prime_UTR |
CAACTTAACATGATCTAAAT+AGG | 0.260023 | 5:+18338898 | None:intergenic |
AAGAATGCCAAATTTGGTTT+TGG | 0.274042 | 5:-18339095 | MsG0580025421.01.T01:CDS |
GTTTAACAAAGCATCAAAAT+TGG | 0.274732 | 5:+18338835 | None:intergenic |
ACCTAGCTTACAACCTTTAG+TGG | 0.292037 | 5:+18340224 | None:intergenic |
TCAAAGCTCAAAGACTTATC+TGG | 0.326167 | 5:+18339242 | None:intergenic |
AGAAAGGGCCAAGCAGAAAA+AGG | 0.351345 | 5:-18339336 | MsG0580025421.01.T01:CDS |
TCAGTTTCATCGTCAATCAT+TGG | 0.361449 | 5:+18339815 | None:intergenic |
TCTGCTTCTTCGATCCCTTC+CGG | 0.371874 | 5:+18339069 | None:intergenic |
TGCTTCCAATCCACATTCTC+AGG | 0.372391 | 5:+18339665 | None:intergenic |
TGACGATGAAACTGAAGATT+TGG | 0.372516 | 5:-18339807 | MsG0580025421.01.T01:CDS |
GATTGAAATGGAGGTGCCTT+TGG | 0.375124 | 5:-18339849 | MsG0580025421.01.T01:CDS |
TTCAGTAAGGGTTCTGCTGC+TGG | 0.381325 | 5:-18339014 | MsG0580025421.01.T01:CDS |
TTACCTCCTGACCGATCTCC+TGG | 0.396701 | 5:+18339170 | None:intergenic |
AGACAATCTCTTTGCTTCCC+TGG | 0.401049 | 5:+18339385 | None:intergenic |
AGATAAGTCTTTGAGCTTTG+AGG | 0.404345 | 5:-18339240 | MsG0580025421.01.T01:CDS |
CTGAAGAGAGAAGAAAGGCC+AGG | 0.422247 | 5:-18339403 | MsG0580025421.01.T01:CDS |
CTCTCCATTGATATTGATCA+AGG | 0.434506 | 5:-18339638 | MsG0580025421.01.T01:CDS |
GGTATTTGTATAGATTGAAA+TGG | 0.441908 | 5:-18339861 | MsG0580025421.01.T01:intron |
AGTCACAGAAATTGAAAGAA+AGG | 0.458750 | 5:-18339352 | MsG0580025421.01.T01:CDS |
AATGCGGCTATGGCACAATC+TGG | 0.459141 | 5:-18338952 | MsG0580025421.01.T01:three_prime_UTR |
ATGGAGGTGCCTTTGGTTAA+CGG | 0.462087 | 5:-18339842 | MsG0580025421.01.T01:CDS |
GAAAAGGGAGATTCCACTAA+AGG | 0.464425 | 5:-18340237 | MsG0580025421.01.T01:CDS |
CTTGTCATGGAATGCGGCTA+TGG | 0.473984 | 5:-18338962 | MsG0580025421.01.T01:three_prime_UTR |
TAGTCAGCAGGTCTCAAGAA+AGG | 0.478435 | 5:+18339509 | None:intergenic |
CTTTGAGAAGCTTGAGTCGA+TGG | 0.481104 | 5:-18339537 | MsG0580025421.01.T01:CDS |
TTGCCCTTGATCAATATCAA+TGG | 0.482007 | 5:+18339634 | None:intergenic |
TGCTGACTATTACGCAGAAA+TGG | 0.488469 | 5:-18339495 | MsG0580025421.01.T01:CDS |
CCGATCTCCTGGAGATACTC+CGG | 0.494759 | 5:+18339181 | None:intergenic |
AGGAGATCGGTCAGGAGGTA+AGG | 0.497659 | 5:-18339168 | MsG0580025421.01.T01:CDS |
AGTCTTTGAGCTTTGAGGAT+GGG | 0.501140 | 5:-18339235 | MsG0580025421.01.T01:CDS |
AGTCAGCAGGTCTCAAGAAA+GGG | 0.501463 | 5:+18339510 | None:intergenic |
GGGAGATAGCCACATGGAAA+AGG | 0.502899 | 5:-18339468 | MsG0580025421.01.T01:CDS |
CATAAGCTGGCCTGAGAATG+TGG | 0.503617 | 5:-18339675 | MsG0580025421.01.T01:CDS |
TCTTCTGAATCTGATTCAAA+CGG | 0.503965 | 5:+18339770 | None:intergenic |
GTCACAGAAATTGAAAGAAA+GGG | 0.504083 | 5:-18339351 | MsG0580025421.01.T01:CDS |
GCAAAGCAAGCTATGGGAAA+GGG | 0.507585 | 5:-18339146 | MsG0580025421.01.T01:CDS |
ATTAGATGAGAAGCGGAAGA+TGG | 0.510158 | 5:-18339432 | MsG0580025421.01.T01:CDS |
GGCATTGGAGGGAACTAGAC+AGG | 0.514311 | 5:-18339561 | MsG0580025421.01.T01:CDS |
AGGTAAGGCAAAGCAAGCTA+TGG | 0.517763 | 5:-18339153 | MsG0580025421.01.T01:CDS |
TTTGAGAAGCTTGAGTCGAT+GGG | 0.525398 | 5:-18339536 | MsG0580025421.01.T01:CDS |
GGAGGCTGAAGAGAGAAGAA+AGG | 0.530598 | 5:-18339408 | MsG0580025421.01.T01:CDS |
CAAAGACTTATCTGGAGCAT+CGG | 0.536868 | 5:+18339250 | None:intergenic |
AGATGAGAAGCGGAAGATGG+AGG | 0.539024 | 5:-18339429 | MsG0580025421.01.T01:CDS |
GATGCTATATTAGATAAACT+TGG | 0.546950 | 5:-18339701 | MsG0580025421.01.T01:CDS |
TGAAACTGAAGATTTGGATG+AGG | 0.549051 | 5:-18339801 | MsG0580025421.01.T01:CDS |
AGCAAAGAGATTGTCTAAAG+AGG | 0.557828 | 5:-18339378 | MsG0580025421.01.T01:CDS |
AAGAGGCCCGGAGTATCTCC+AGG | 0.558097 | 5:-18339188 | MsG0580025421.01.T01:CDS |
GTATCTCCAGGAGATCGGTC+AGG | 0.562327 | 5:-18339176 | MsG0580025421.01.T01:CDS |
CGATCTCCTGGAGATACTCC+GGG | 0.563080 | 5:+18339182 | None:intergenic |
ATTTCTGCGTAATAGTCAGC+AGG | 0.568461 | 5:+18339497 | None:intergenic |
TGTCTCTACTAACACAGGCT+TGG | 0.570044 | 5:+18338757 | None:intergenic |
ATAAACTTGGAGACATAAGC+TGG | 0.571619 | 5:-18339688 | MsG0580025421.01.T01:CDS |
CCGGAGTATCTCCAGGAGAT+CGG | 0.576336 | 5:-18339181 | MsG0580025421.01.T01:CDS |
AAGTCTTTGAGCTTTGAGGA+TGG | 0.577328 | 5:-18339236 | MsG0580025421.01.T01:CDS |
AGTAGATGTGAACGATGACT+TGG | 0.577868 | 5:-18339609 | MsG0580025421.01.T01:CDS |
TGAAGAGAGAAGAAAGGCCA+GGG | 0.579670 | 5:-18339402 | MsG0580025421.01.T01:CDS |
CAACAGAGTGGGTTTGCTGA+TGG | 0.580952 | 5:-18339275 | MsG0580025421.01.T01:CDS |
CATCGACTCAAGCTTCTCAA+AGG | 0.582387 | 5:+18339538 | None:intergenic |
GGCAAAGCAAGCTATGGGAA+AGG | 0.584114 | 5:-18339147 | MsG0580025421.01.T01:CDS |
GGTAAGGCAAAGCAAGCTAT+GGG | 0.598074 | 5:-18339152 | MsG0580025421.01.T01:CDS |
GGAAGCAGAGACAACAGAGT+GGG | 0.599709 | 5:-18339286 | MsG0580025421.01.T01:CDS |
ACATTGAATCTGTTAAGAAG+TGG | 0.600860 | 5:-18339310 | MsG0580025421.01.T01:CDS |
TGAGAAGCGGAAGATGGAGG+AGG | 0.603783 | 5:-18339426 | MsG0580025421.01.T01:CDS |
TTGAATCTGTTAAGAAGTGG+AGG | 0.608378 | 5:-18339307 | MsG0580025421.01.T01:CDS |
CTATTACGCAGAAATGGTGA+AGG | 0.608653 | 5:-18339489 | MsG0580025421.01.T01:CDS |
GTCGGCTATTAGATGAGAAG+CGG | 0.609331 | 5:-18339439 | MsG0580025421.01.T01:CDS |
TATAATCTTGTCATGGAATG+CGG | 0.609594 | 5:-18338968 | MsG0580025421.01.T01:three_prime_UTR |
GCTGGCCTGAGAATGTGGAT+TGG | 0.611875 | 5:-18339670 | MsG0580025421.01.T01:CDS |
AGATAAATATAATCTTGTCA+TGG | 0.612710 | 5:-18338975 | MsG0580025421.01.T01:exon |
ATTTGTATAGATTGAAATGG+AGG | 0.615579 | 5:-18339858 | MsG0580025421.01.T01:intron |
ACATGGAAAAGGTGAAAAGT+CGG | 0.619320 | 5:-18339457 | MsG0580025421.01.T01:CDS |
TCTCCATTGATATTGATCAA+GGG | 0.625695 | 5:-18339637 | MsG0580025421.01.T01:CDS |
AGATATGTCTCTACTAACAC+AGG | 0.644101 | 5:+18338752 | None:intergenic |
AGGAAGCAGAGACAACAGAG+TGG | 0.651328 | 5:-18339287 | MsG0580025421.01.T01:CDS |
TCTCCAGGAGATCGGTCAGG+AGG | 0.664692 | 5:-18339173 | MsG0580025421.01.T01:CDS |
ATTGGATCACCGTTAACCAA+AGG | 0.669243 | 5:+18339833 | None:intergenic |
TATTACGCAGAAATGGTGAA+GGG | 0.681147 | 5:-18339488 | MsG0580025421.01.T01:CDS |
GGTGAAGGGAGATAGCCACA+TGG | 0.757517 | 5:-18339474 | MsG0580025421.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAACACAAATAATTAAA+GGG | + | Chr5:18338845-18338864 | None:intergenic | 10.0% |
!! | CAATTAACACAAATAATTAA+AGG | + | Chr5:18338846-18338865 | None:intergenic | 15.0% |
!!! | AAAAATAAATATCCATTTTC+CGG | + | Chr5:18338884-18338903 | None:intergenic | 15.0% |
!!! | AGAAAAATAATTGTTTTGTA+AGG | - | Chr5:18339031-18339050 | MsG0580025421.01.T01:CDS | 15.0% |
!!! | ATGATTTGTTTTACTTTATT+TGG | - | Chr5:18339078-18339097 | MsG0580025421.01.T01:CDS | 15.0% |
!! | AGATAAATATAATCTTGTCA+TGG | - | Chr5:18339985-18340004 | MsG0580025421.01.T01:intron | 20.0% |
!!! | AGAATTTTAATCAAATCTGT+AGG | - | Chr5:18340031-18340050 | MsG0580025421.01.T01:intron | 20.0% |
!!! | GTTAAGTTGATAAACTTTAT+TGG | - | Chr5:18340076-18340095 | MsG0580025421.01.T01:intron | 20.0% |
! | ATTGTAAACCTAATATGTTC+CGG | - | Chr5:18338862-18338881 | MsG0580025421.01.T01:three_prime_UTR | 25.0% |
! | ATTTGTATAGATTGAAATGG+AGG | - | Chr5:18339102-18339121 | MsG0580025421.01.T01:CDS | 25.0% |
! | CAACTTAACATGATCTAAAT+AGG | + | Chr5:18340065-18340084 | None:intergenic | 25.0% |
! | GATGCTATATTAGATAAACT+TGG | - | Chr5:18339259-18339278 | MsG0580025421.01.T01:CDS | 25.0% |
! | GGTATTTGTATAGATTGAAA+TGG | - | Chr5:18339099-18339118 | MsG0580025421.01.T01:CDS | 25.0% |
!! | GTTTAACAAAGCATCAAAAT+TGG | + | Chr5:18340128-18340147 | None:intergenic | 25.0% |
!! | TTAGTATCTCTTTTCTTTTG+CGG | + | Chr5:18339847-18339866 | None:intergenic | 25.0% |
ACATTGAATCTGTTAAGAAG+TGG | - | Chr5:18339650-18339669 | MsG0580025421.01.T01:CDS | 30.0% | |
AGTCACAGAAATTGAAAGAA+AGG | - | Chr5:18339608-18339627 | MsG0580025421.01.T01:CDS | 30.0% | |
GAGTCAAATAAACCACTATA+CGG | + | Chr5:18338918-18338937 | None:intergenic | 30.0% | |
GATACTAAGAATGCCAAATT+TGG | - | Chr5:18339859-18339878 | MsG0580025421.01.T01:intron | 30.0% | |
GTCACAGAAATTGAAAGAAA+GGG | - | Chr5:18339609-18339628 | MsG0580025421.01.T01:CDS | 30.0% | |
TATAATCTTGTCATGGAATG+CGG | - | Chr5:18339992-18340011 | MsG0580025421.01.T01:intron | 30.0% | |
TCTCCATTGATATTGATCAA+GGG | - | Chr5:18339323-18339342 | MsG0580025421.01.T01:CDS | 30.0% | |
TCTTCTGAATCTGATTCAAA+CGG | + | Chr5:18339193-18339212 | None:intergenic | 30.0% | |
! | GAAACAACTAATGATTTTGG+CGG | - | Chr5:18339922-18339941 | MsG0580025421.01.T01:intron | 30.0% |
! | GCTGAAACAACTAATGATTT+TGG | - | Chr5:18339919-18339938 | MsG0580025421.01.T01:intron | 30.0% |
!! | AAACAACTAATGATTTTGGC+GGG | - | Chr5:18339923-18339942 | MsG0580025421.01.T01:intron | 30.0% |
!! | AAGAATGCCAAATTTGGTTT+TGG | - | Chr5:18339865-18339884 | MsG0580025421.01.T01:intron | 30.0% |
!!! | TTATTCACTGCAGTTTTAGA+TGG | + | Chr5:18339235-18339254 | None:intergenic | 30.0% |
ACATGGAAAAGGTGAAAAGT+CGG | - | Chr5:18339503-18339522 | MsG0580025421.01.T01:CDS | 35.0% | |
ACCTAATATGTTCCGGAAAA+TGG | - | Chr5:18338869-18338888 | MsG0580025421.01.T01:three_prime_UTR | 35.0% | |
AGATAAGTCTTTGAGCTTTG+AGG | - | Chr5:18339720-18339739 | MsG0580025421.01.T01:CDS | 35.0% | |
AGATATGTCTCTACTAACAC+AGG | + | Chr5:18340211-18340230 | None:intergenic | 35.0% | |
AGCAAAGAGATTGTCTAAAG+AGG | - | Chr5:18339582-18339601 | MsG0580025421.01.T01:CDS | 35.0% | |
ATAAACTTGGAGACATAAGC+TGG | - | Chr5:18339272-18339291 | MsG0580025421.01.T01:CDS | 35.0% | |
CTCTCCATTGATATTGATCA+AGG | - | Chr5:18339322-18339341 | MsG0580025421.01.T01:CDS | 35.0% | |
GATACATCACACTGATAACA+TGG | - | Chr5:18338784-18338803 | MsG0580025421.01.T01:three_prime_UTR | 35.0% | |
GGGAAAAATGTGGTTGAAAA+GGG | - | Chr5:18338708-18338727 | MsG0580025421.01.T01:three_prime_UTR | 35.0% | |
TAAAATATTCCCAAGCCAGT+AGG | + | Chr5:18338990-18339009 | None:intergenic | 35.0% | |
TATTACGCAGAAATGGTGAA+GGG | - | Chr5:18339472-18339491 | MsG0580025421.01.T01:CDS | 35.0% | |
TCAAAGCTCAAAGACTTATC+TGG | + | Chr5:18339721-18339740 | None:intergenic | 35.0% | |
TCAGTTTCATCGTCAATCAT+TGG | + | Chr5:18339148-18339167 | None:intergenic | 35.0% | |
TCGAGAGATCAAAGAAAAAG+AGG | - | Chr5:18339755-18339774 | MsG0580025421.01.T01:CDS | 35.0% | |
TGAAACTGAAGATTTGGATG+AGG | - | Chr5:18339159-18339178 | MsG0580025421.01.T01:CDS | 35.0% | |
TGACGATGAAACTGAAGATT+TGG | - | Chr5:18339153-18339172 | MsG0580025421.01.T01:CDS | 35.0% | |
TGGGAAAAATGTGGTTGAAA+AGG | - | Chr5:18338707-18338726 | MsG0580025421.01.T01:three_prime_UTR | 35.0% | |
TTGAATCTGTTAAGAAGTGG+AGG | - | Chr5:18339653-18339672 | MsG0580025421.01.T01:CDS | 35.0% | |
TTGCCCTTGATCAATATCAA+TGG | + | Chr5:18339329-18339348 | None:intergenic | 35.0% | |
! | AATGTCATCCTTTTTCTGCT+TGG | + | Chr5:18339635-18339654 | None:intergenic | 35.0% |
! | TCCATTTTCCGGAACATATT+AGG | + | Chr5:18338873-18338892 | None:intergenic | 35.0% |
!!! | AATGCCAAATTTGGTTTTGG+AGG | - | Chr5:18339868-18339887 | MsG0580025421.01.T01:intron | 35.0% |
ACCTAGCTTACAACCTTTAG+TGG | + | Chr5:18338739-18338758 | None:intergenic | 40.0% | |
AGATCAAAGAAAAAGAGGCC+CGG | - | Chr5:18339760-18339779 | MsG0580025421.01.T01:CDS | 40.0% | |
AGTAGATGTGAACGATGACT+TGG | - | Chr5:18339351-18339370 | MsG0580025421.01.T01:CDS | 40.0% | |
ATTAGATGAGAAGCGGAAGA+TGG | - | Chr5:18339528-18339547 | MsG0580025421.01.T01:CDS | 40.0% | |
ATTGGATCACCGTTAACCAA+AGG | + | Chr5:18339130-18339149 | None:intergenic | 40.0% | |
ATTTCTGCGTAATAGTCAGC+AGG | + | Chr5:18339466-18339485 | None:intergenic | 40.0% | |
CTATTACGCAGAAATGGTGA+AGG | - | Chr5:18339471-18339490 | MsG0580025421.01.T01:CDS | 40.0% | |
GAAAAGGGAGATTCCACTAA+AGG | - | Chr5:18338723-18338742 | MsG0580025421.01.T01:three_prime_UTR | 40.0% | |
TATCAGTGTGATGTATCCAC+CGG | + | Chr5:18338781-18338800 | None:intergenic | 40.0% | |
TCCACTAAAGGTTGTAAGCT+AGG | - | Chr5:18338735-18338754 | MsG0580025421.01.T01:three_prime_UTR | 40.0% | |
TTTGAGAAGCTTGAGTCGAT+GGG | - | Chr5:18339424-18339443 | MsG0580025421.01.T01:CDS | 40.0% | |
! | AGGTTGTAAGCTAGGTTTTC+CGG | - | Chr5:18338743-18338762 | MsG0580025421.01.T01:three_prime_UTR | 40.0% |
! | CAAAGACTTATCTGGAGCAT+CGG | + | Chr5:18339713-18339732 | None:intergenic | 40.0% |
! | GACTTTTCACCTTTTCCATG+TGG | + | Chr5:18339504-18339523 | None:intergenic | 40.0% |
! | TGCTGACTATTACGCAGAAA+TGG | - | Chr5:18339465-18339484 | MsG0580025421.01.T01:CDS | 40.0% |
!! | AAGTCTTTGAGCTTTGAGGA+TGG | - | Chr5:18339724-18339743 | MsG0580025421.01.T01:CDS | 40.0% |
!! | AGTCTTTGAGCTTTGAGGAT+GGG | - | Chr5:18339725-18339744 | MsG0580025421.01.T01:CDS | 40.0% |
AATATTCCCAAGCCAGTAGG+TGG | + | Chr5:18338987-18339006 | None:intergenic | 45.0% | |
AGAAAGGGCCAAGCAGAAAA+AGG | - | Chr5:18339624-18339643 | MsG0580025421.01.T01:CDS | 45.0% | |
AGACAATCTCTTTGCTTCCC+TGG | + | Chr5:18339578-18339597 | None:intergenic | 45.0% | |
AGGTAAGGCAAAGCAAGCTA+TGG | - | Chr5:18339807-18339826 | MsG0580025421.01.T01:CDS | 45.0% | |
AGTCAGCAGGTCTCAAGAAA+GGG | + | Chr5:18339453-18339472 | None:intergenic | 45.0% | |
GCAAAGCAAGCTATGGGAAA+GGG | - | Chr5:18339814-18339833 | MsG0580025421.01.T01:CDS | 45.0% | |
GGTAAGGCAAAGCAAGCTAT+GGG | - | Chr5:18339808-18339827 | MsG0580025421.01.T01:CDS | 45.0% | |
GTCGGCTATTAGATGAGAAG+CGG | - | Chr5:18339521-18339540 | MsG0580025421.01.T01:CDS | 45.0% | |
TAGTCAGCAGGTCTCAAGAA+AGG | + | Chr5:18339454-18339473 | None:intergenic | 45.0% | |
TGAAGAGAGAAGAAAGGCCA+GGG | - | Chr5:18339558-18339577 | MsG0580025421.01.T01:CDS | 45.0% | |
TGCTTCCAATCCACATTCTC+AGG | + | Chr5:18339298-18339317 | None:intergenic | 45.0% | |
TGTCTCTACTAACACAGGCT+TGG | + | Chr5:18340206-18340225 | None:intergenic | 45.0% | |
TGTGCTCTGTATCCGTATAG+TGG | - | Chr5:18338903-18338922 | MsG0580025421.01.T01:three_prime_UTR | 45.0% | |
! | ATCGTTTTACACGCAGGCAT+TGG | - | Chr5:18339384-18339403 | MsG0580025421.01.T01:CDS | 45.0% |
! | CTTTGAGAAGCTTGAGTCGA+TGG | - | Chr5:18339423-18339442 | MsG0580025421.01.T01:CDS | 45.0% |
! | TGAGCTATCGTTTTACACGC+AGG | - | Chr5:18339378-18339397 | MsG0580025421.01.T01:CDS | 45.0% |
!! | ATGGAGGTGCCTTTGGTTAA+CGG | - | Chr5:18339118-18339137 | MsG0580025421.01.T01:CDS | 45.0% |
!! | CATCGACTCAAGCTTCTCAA+AGG | + | Chr5:18339425-18339444 | None:intergenic | 45.0% |
!! | GATTGAAATGGAGGTGCCTT+TGG | - | Chr5:18339111-18339130 | MsG0580025421.01.T01:CDS | 45.0% |
!! | TATTCTCCACCTACTGGCTT+GGG | - | Chr5:18338978-18338997 | MsG0580025421.01.T01:exon | 45.0% |
!!! | CCAAATTTGGTTTTGGAGGC+CGG | - | Chr5:18339872-18339891 | MsG0580025421.01.T01:intron | 45.0% |
!!! | GATTTTGGCGGGTTCAGTAA+GGG | - | Chr5:18339934-18339953 | MsG0580025421.01.T01:intron | 45.0% |
!!! | TGATTTTGGCGGGTTCAGTA+AGG | - | Chr5:18339933-18339952 | MsG0580025421.01.T01:intron | 45.0% |
!!! | TTTTACACGCAGGCATTGGA+GGG | - | Chr5:18339388-18339407 | MsG0580025421.01.T01:CDS | 45.0% |
AATGCGGCTATGGCACAATC+TGG | - | Chr5:18340008-18340027 | MsG0580025421.01.T01:intron | 50.0% | |
AGATGAGAAGCGGAAGATGG+AGG | - | Chr5:18339531-18339550 | MsG0580025421.01.T01:CDS | 50.0% | |
AGGAAGCAGAGACAACAGAG+TGG | - | Chr5:18339673-18339692 | MsG0580025421.01.T01:CDS | 50.0% | |
CAAGCCAGTAGGTGGAGAAT+AGG | + | Chr5:18338979-18338998 | None:intergenic | 50.0% | |
CCGGCCTCCAAAACCAAATT+TGG | + | Chr5:18339875-18339894 | None:intergenic | 50.0% | |
CTGAAGAGAGAAGAAAGGCC+AGG | - | Chr5:18339557-18339576 | MsG0580025421.01.T01:CDS | 50.0% | |
CTTGTCATGGAATGCGGCTA+TGG | - | Chr5:18339998-18340017 | MsG0580025421.01.T01:intron | 50.0% | |
GATGCCTATTCTCCACCTAC+TGG | - | Chr5:18338972-18338991 | MsG0580025421.01.T01:three_prime_UTR | 50.0% | |
GGAAGCAGAGACAACAGAGT+GGG | - | Chr5:18339674-18339693 | MsG0580025421.01.T01:CDS | 50.0% | |
GGAGGCTGAAGAGAGAAGAA+AGG | - | Chr5:18339552-18339571 | MsG0580025421.01.T01:CDS | 50.0% | |
GGCAAAGCAAGCTATGGGAA+AGG | - | Chr5:18339813-18339832 | MsG0580025421.01.T01:CDS | 50.0% | |
GGGAGATAGCCACATGGAAA+AGG | - | Chr5:18339492-18339511 | MsG0580025421.01.T01:CDS | 50.0% | |
GTATCCACCGGCATTACTCT+TGG | + | Chr5:18338769-18338788 | None:intergenic | 50.0% | |
TCTGCTTCTTCGATCCCTTC+CGG | + | Chr5:18339894-18339913 | None:intergenic | 50.0% | |
TTCAGTAAGGGTTCTGCTGC+TGG | - | Chr5:18339946-18339965 | MsG0580025421.01.T01:intron | 50.0% | |
TTTCCGGCCAAGAGTAATGC+CGG | - | Chr5:18338759-18338778 | MsG0580025421.01.T01:three_prime_UTR | 50.0% | |
! | CATAAGCTGGCCTGAGAATG+TGG | - | Chr5:18339285-18339304 | MsG0580025421.01.T01:CDS | 50.0% |
! | CTATTCTCCACCTACTGGCT+TGG | - | Chr5:18338977-18338996 | MsG0580025421.01.T01:exon | 50.0% |
!! | CAACAGAGTGGGTTTGCTGA+TGG | - | Chr5:18339685-18339704 | MsG0580025421.01.T01:CDS | 50.0% |
!!! | ATTTGGTTTTGGAGGCCGGA+AGG | - | Chr5:18339876-18339895 | MsG0580025421.01.T01:intron | 50.0% |
!!! | GTTTTACACGCAGGCATTGG+AGG | - | Chr5:18339387-18339406 | MsG0580025421.01.T01:CDS | 50.0% |
!!! | TTTGGTTTTGGAGGCCGGAA+GGG | - | Chr5:18339877-18339896 | MsG0580025421.01.T01:intron | 50.0% |
AGGAGATCGGTCAGGAGGTA+AGG | - | Chr5:18339792-18339811 | MsG0580025421.01.T01:CDS | 55.0% | |
CCGATCTCCTGGAGATACTC+CGG | + | Chr5:18339782-18339801 | None:intergenic | 55.0% | |
CGATCTCCTGGAGATACTCC+GGG | + | Chr5:18339781-18339800 | None:intergenic | 55.0% | |
GGTGAAGGGAGATAGCCACA+TGG | - | Chr5:18339486-18339505 | MsG0580025421.01.T01:CDS | 55.0% | |
GTATCTCCAGGAGATCGGTC+AGG | - | Chr5:18339784-18339803 | MsG0580025421.01.T01:CDS | 55.0% | |
TGAGAAGCGGAAGATGGAGG+AGG | - | Chr5:18339534-18339553 | MsG0580025421.01.T01:CDS | 55.0% | |
TTACCTCCTGACCGATCTCC+TGG | + | Chr5:18339793-18339812 | None:intergenic | 55.0% | |
! | CCGGAGTATCTCCAGGAGAT+CGG | - | Chr5:18339779-18339798 | MsG0580025421.01.T01:CDS | 55.0% |
! | GCTGGCCTGAGAATGTGGAT+TGG | - | Chr5:18339290-18339309 | MsG0580025421.01.T01:CDS | 55.0% |
! | GGCATTGGAGGGAACTAGAC+AGG | - | Chr5:18339399-18339418 | MsG0580025421.01.T01:CDS | 55.0% |
CCACCGGCATTACTCTTGGC+CGG | + | Chr5:18338765-18338784 | None:intergenic | 60.0% | |
TCTCCAGGAGATCGGTCAGG+AGG | - | Chr5:18339787-18339806 | MsG0580025421.01.T01:CDS | 60.0% | |
! | AAGAGGCCCGGAGTATCTCC+AGG | - | Chr5:18339772-18339791 | MsG0580025421.01.T01:CDS | 60.0% |
CCGGCCAAGAGTAATGCCGG+TGG | - | Chr5:18338762-18338781 | MsG0580025421.01.T01:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 18338706 | 18340276 | 18338706 | ID=MsG0580025421.01;Name=MsG0580025421.01 |
Chr5 | mRNA | 18338706 | 18340276 | 18338706 | ID=MsG0580025421.01.T01;Parent=MsG0580025421.01;Name=MsG0580025421.01.T01;_AED=0.27;_eAED=0.29;_QI=0|0|0.5|1|1|1|2|286|306 |
Chr5 | exon | 18338706 | 18339870 | 18338706 | ID=MsG0580025421.01.T01:exon:3089;Parent=MsG0580025421.01.T01 |
Chr5 | exon | 18340235 | 18340276 | 18340235 | ID=MsG0580025421.01.T01:exon:3088;Parent=MsG0580025421.01.T01 |
Chr5 | CDS | 18340235 | 18340276 | 18340235 | ID=MsG0580025421.01.T01:cds;Parent=MsG0580025421.01.T01 |
Chr5 | CDS | 18338992 | 18339870 | 18338992 | ID=MsG0580025421.01.T01:cds;Parent=MsG0580025421.01.T01 |
Chr5 | three_prime_UTR | 18338706 | 18338991 | 18338706 | ID=MsG0580025421.01.T01:three_prime_utr;Parent=MsG0580025421.01.T01 |
Gene Sequence |
Protein sequence |