AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009230.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009230.01.T01 MTR_2g055850 90.693 548 37 3 1 548 1 534 0.0 939
MsG0280009230.01.T01 MTR_4g112340 72.805 467 117 2 83 548 84 541 0.0 688
MsG0280009230.01.T01 MTR_4g112320 75.000 352 78 2 183 533 2 344 0.0 557
MsG0280009230.01.T01 MTR_8g042690 40.987 466 242 10 95 543 7 456 2.86e-101 313
MsG0280009230.01.T01 MTR_5g092560 41.876 437 235 7 101 532 81 503 2.76e-98 314
MsG0280009230.01.T01 MTR_2g043360 37.148 533 243 12 89 532 34 563 1.53e-96 306
MsG0280009230.01.T01 MTR_4g059460 37.100 531 242 12 91 532 39 566 3.46e-95 302
MsG0280009230.01.T01 MTR_4g068990 42.273 440 226 13 102 532 83 503 3.43e-93 301
MsG0280009230.01.T01 MTR_3g071620 35.892 482 275 11 83 542 1 470 3.11e-83 271
MsG0280009230.01.T01 MTR_6g082080 40.374 374 197 8 95 463 9 361 9.56e-78 252
MsG0280009230.01.T01 MTR_7g056830 39.840 374 199 8 95 463 9 361 1.49e-76 249
MsG0280009230.01.T01 MTR_2g043360 35.828 441 184 11 183 532 13 445 1.06e-72 240
MsG0280009230.01.T01 MTR_8g027775 33.208 533 296 20 23 519 13 521 5.34e-70 235
MsG0280009230.01.T01 MTR_8g027770 34.763 443 255 11 92 519 197 620 8.70e-67 229
MsG0280009230.01.T01 MTR_8g097000 32.829 463 272 15 76 524 273 710 4.82e-65 226
MsG0280009230.01.T01 MTR_8g027780 32.463 536 270 19 42 519 24 525 3.79e-64 219
MsG0280009230.01.T01 MTR_2g041140 32.043 465 274 9 53 500 99 538 1.62e-62 219
MsG0280009230.01.T01 MTR_5g092560 40.656 305 163 6 233 532 1 292 2.47e-60 208
MsG0280009230.01.T01 MTR_3g049990 31.925 426 248 9 92 500 148 548 6.30e-57 203
MsG0280009230.01.T01 MTR_4g068990 40.391 307 161 9 233 532 1 292 3.69e-56 197
MsG0280009230.01.T01 MTR_2g100230 32.804 378 232 10 95 467 95 455 6.43e-54 190
MsG0280009230.01.T01 MTR_8g027780 32.102 433 226 14 42 425 24 437 8.96e-53 186
MsG0280009230.01.T01 MTR_3g467550 32.564 390 231 9 95 470 116 487 8.51e-52 186
MsG0280009230.01.T01 MTR_2g007000 33.245 379 221 12 96 463 504 861 5.91e-51 189
MsG0280009230.01.T01 MTR_1g095810 33.141 347 208 7 119 456 168 499 7.25e-51 184
MsG0280009230.01.T01 MTR_7g076820 33.046 348 214 5 97 444 151 479 1.02e-50 182
MsG0280009230.01.T01 MTR_3g467550 32.800 375 220 9 110 470 100 456 2.13e-50 181
MsG0280009230.01.T01 MTR_7g076830 32.759 348 215 5 97 444 144 472 2.66e-50 181
MsG0280009230.01.T01 MTR_7g076800 32.759 348 215 5 97 444 142 470 3.85e-50 180
MsG0280009230.01.T01 MTR_2g066050 32.796 372 219 9 93 454 50 400 1.59e-49 179
MsG0280009230.01.T01 MTR_0279s0040 75.248 101 25 0 320 420 2 102 3.22e-49 166
MsG0280009230.01.T01 MTR_1g026830 30.189 371 235 7 95 456 146 501 4.06e-49 179
MsG0280009230.01.T01 MTR_4g105100 35.040 371 203 13 110 467 216 561 1.14e-48 178
MsG0280009230.01.T01 MTR_4g079320 30.728 371 237 8 97 464 20 373 6.03e-48 178
MsG0280009230.01.T01 MTR_2g032630 32.698 367 222 9 96 456 496 843 5.39e-47 177
MsG0280009230.01.T01 MTR_3g083690 30.415 434 262 10 55 468 107 520 2.45e-46 172
MsG0280009230.01.T01 MTR_7g109720 31.452 372 238 6 95 463 231 588 1.92e-45 171
MsG0280009230.01.T01 MTR_4g134170 31.458 391 238 9 96 468 287 665 2.51e-45 170
MsG0280009230.01.T01 MTR_6g005320 28.041 485 287 13 29 468 158 625 2.57e-45 169
MsG0280009230.01.T01 MTR_4g459350 45.652 184 97 2 91 271 36 219 5.07e-45 160
MsG0280009230.01.T01 MTR_3g449250 30.328 366 226 10 97 454 91 435 5.95e-45 167
MsG0280009230.01.T01 MTR_5g090120 30.435 391 241 11 88 468 71 440 1.54e-44 166
MsG0280009230.01.T01 MTR_3g449250 30.328 366 226 10 97 454 91 435 1.61e-44 166
MsG0280009230.01.T01 MTR_3g467550 32.665 349 204 8 95 429 116 447 1.66e-44 164
MsG0280009230.01.T01 MTR_6g005550 31.868 364 229 8 96 456 165 512 3.61e-43 164
MsG0280009230.01.T01 MTR_1g054630 30.569 422 252 11 55 456 116 516 1.79e-42 160
MsG0280009230.01.T01 MTR_4g125970 30.319 376 234 10 95 465 40 392 4.75e-42 156
MsG0280009230.01.T01 MTR_4g125970 30.319 376 234 10 95 465 57 409 1.12e-41 155
MsG0280009230.01.T01 MTR_7g057250 27.830 424 244 10 96 460 163 583 2.71e-41 159
MsG0280009230.01.T01 MTR_5g069330 31.472 394 229 11 95 474 2 368 4.29e-41 153
MsG0280009230.01.T01 MTR_5g069330 31.472 394 229 11 95 474 6 372 4.73e-41 153
MsG0280009230.01.T01 MTR_2g039960 29.333 375 237 10 95 464 40 391 1.34e-40 152
MsG0280009230.01.T01 MTR_4g114120 29.438 445 280 11 41 467 88 516 5.59e-40 154
MsG0280009230.01.T01 MTR_2g099620 30.423 378 231 13 94 464 23 375 1.16e-39 149
MsG0280009230.01.T01 MTR_2g099620 30.423 378 231 13 94 464 39 391 1.35e-39 149
MsG0280009230.01.T01 MTR_6g039840 31.383 376 228 13 96 454 110 472 4.49e-39 152
MsG0280009230.01.T01 MTR_1g102410 31.450 407 228 14 78 458 34 415 4.26e-38 149
MsG0280009230.01.T01 MTR_6g056080 33.908 348 203 12 121 458 128 458 5.33e-38 149
MsG0280009230.01.T01 MTR_5g027840 31.742 356 211 9 114 456 120 456 6.42e-38 147
MsG0280009230.01.T01 MTR_8g018400 29.973 377 232 13 95 464 40 391 9.05e-38 144
MsG0280009230.01.T01 MTR_4g105100 35.110 319 170 12 110 415 216 510 1.22e-37 146
MsG0280009230.01.T01 MTR_6g033070 30.151 398 234 14 96 473 140 513 1.78e-37 145
MsG0280009230.01.T01 MTR_2g438110 26.790 377 256 8 90 465 28 385 1.82e-37 143
MsG0280009230.01.T01 MTR_3g118120 28.079 406 249 15 89 465 125 516 2.84e-37 145
MsG0280009230.01.T01 MTR_0915s0010 31.973 294 181 5 115 408 8 282 9.92e-37 138
MsG0280009230.01.T01 MTR_4g010565 27.913 369 243 9 92 456 120 469 8.79e-36 140
MsG0280009230.01.T01 MTR_7g100820 29.722 360 227 10 110 465 148 485 1.07e-35 141
MsG0280009230.01.T01 MTR_1g012420 27.913 369 243 9 92 456 43 392 1.20e-35 138
MsG0280009230.01.T01 MTR_3g107420 27.913 369 243 9 92 456 43 392 1.87e-35 138
MsG0280009230.01.T01 MTR_1g022305 28.608 395 180 14 95 474 2 309 5.00e-30 123
MsG0280009230.01.T01 MTR_2g063080 25.771 454 281 12 79 485 96 540 3.61e-29 121
MsG0280009230.01.T01 MTR_1g083130 25.871 402 230 10 94 445 24 407 5.80e-29 121
MsG0280009230.01.T01 MTR_8g032230 41.772 158 80 4 95 248 9 158 1.51e-26 106
MsG0280009230.01.T01 MTR_6g039840 29.730 296 185 11 170 454 13 296 2.15e-26 113
MsG0280009230.01.T01 MTR_4g077370 35.096 208 119 4 96 301 250 443 1.78e-25 109
MsG0280009230.01.T01 MTR_4g077370 32.536 209 106 7 96 300 2 179 3.26e-16 81.6
MsG0280009230.01.T01 MTR_5g077690 25.882 425 224 14 102 454 35 440 2.04e-25 110
MsG0280009230.01.T01 MTR_8g018370 26.230 366 211 11 125 487 2 311 1.25e-23 102
MsG0280009230.01.T01 MTR_4g131750 28.056 360 225 10 108 444 94 442 3.94e-23 103
MsG0280009230.01.T01 MTR_1g061970 26.991 452 269 17 45 457 20 449 5.63e-23 102
MsG0280009230.01.T01 MTR_4g049910 27.062 388 235 15 93 460 52 411 4.08e-21 96.7
MsG0280009230.01.T01 MTR_8g062720 28.125 192 120 4 94 271 89 276 2.10e-18 89.0
MsG0280009230.01.T01 MTR_8g062720 37.634 93 57 1 353 445 437 528 4.98e-14 75.5
MsG0280009230.01.T01 MTR_3g107420 26.168 214 140 6 92 302 43 241 1.31e-14 75.5
MsG0280009230.01.T01 MTR_6g040070 26.368 201 130 5 79 271 561 751 5.14e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009230.01.T01 AT3G18600 62.835 522 156 6 30 532 13 515 0.0 643
MsG0280009230.01.T01 AT5G65900 66.292 445 138 4 89 532 148 581 0.0 618
MsG0280009230.01.T01 AT5G54910 41.309 443 238 11 97 533 73 499 1.15e-99 318
MsG0280009230.01.T01 AT2G40700 36.447 546 257 11 76 532 11 555 1.70e-90 290
MsG0280009230.01.T01 AT5G05450 35.443 474 267 12 92 542 11 468 1.80e-77 256
MsG0280009230.01.T01 AT1G71370 35.242 454 262 10 102 541 23 458 1.73e-76 252
MsG0280009230.01.T01 AT5G60990 38.753 369 204 6 95 454 9 364 1.15e-72 239
MsG0280009230.01.T01 AT5G08620 33.115 459 274 9 32 468 7 454 9.45e-67 226
MsG0280009230.01.T01 AT5G63630 34.423 459 266 12 78 521 38 476 1.53e-64 219
MsG0280009230.01.T01 AT5G63630 34.423 459 266 12 78 521 232 670 9.09e-64 221
MsG0280009230.01.T01 AT5G08610 33.107 441 269 9 92 521 379 804 1.05e-62 221
MsG0280009230.01.T01 AT2G07750 32.287 446 263 13 91 518 371 795 1.14e-58 209
MsG0280009230.01.T01 AT1G63250 31.749 463 273 13 79 518 306 748 7.77e-58 206
MsG0280009230.01.T01 AT4G16630 33.099 426 248 12 56 467 125 527 8.79e-58 206
MsG0280009230.01.T01 AT5G63120 34.946 372 206 12 108 467 178 525 9.91e-55 194
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 531 929 2.98e-53 196
MsG0280009230.01.T01 AT1G77030 32.020 406 255 9 97 498 30 418 5.31e-53 193
MsG0280009230.01.T01 AT1G20920 32.547 424 240 17 97 499 193 591 5.69e-53 193
MsG0280009230.01.T01 AT1G16280 32.242 397 238 9 72 459 34 408 2.15e-52 186
MsG0280009230.01.T01 AT1G55150 31.034 377 240 9 95 467 99 459 2.71e-50 181
MsG0280009230.01.T01 AT1G55150 31.481 378 237 10 95 467 124 484 5.27e-50 180
MsG0280009230.01.T01 AT4G00660 32.471 348 216 6 97 444 133 461 9.04e-50 179
MsG0280009230.01.T01 AT4G00660 32.471 348 216 6 97 444 133 461 9.04e-50 179
MsG0280009230.01.T01 AT5G51280 33.429 347 207 9 119 456 170 501 1.81e-48 177
MsG0280009230.01.T01 AT1G71280 34.743 331 167 6 102 423 24 314 2.84e-48 174
MsG0280009230.01.T01 AT1G71280 33.607 366 178 8 102 458 24 333 2.98e-48 171
MsG0280009230.01.T01 AT3G06480 32.353 374 228 10 96 463 436 790 4.00e-48 180
MsG0280009230.01.T01 AT4G33370 33.239 352 211 7 114 456 116 452 8.70e-48 174
MsG0280009230.01.T01 AT3G61240 32.249 338 208 6 108 444 137 454 1.57e-46 170
MsG0280009230.01.T01 AT3G61240 32.249 338 208 6 108 444 137 454 1.57e-46 170
MsG0280009230.01.T01 AT5G26742 29.056 413 260 8 62 468 81 466 1.59e-46 174
MsG0280009230.01.T01 AT5G26742 29.056 413 260 8 62 468 81 466 1.60e-46 174
MsG0280009230.01.T01 AT2G45810 29.484 407 252 7 39 444 112 484 2.00e-46 171
MsG0280009230.01.T01 AT2G47330 32.796 372 233 7 95 463 228 585 1.91e-45 171
MsG0280009230.01.T01 AT2G42520 30.876 434 259 12 43 456 110 522 1.36e-43 164
MsG0280009230.01.T01 AT2G42520 30.876 434 259 12 43 456 110 522 1.36e-43 164
MsG0280009230.01.T01 AT2G42520 30.876 434 259 12 43 456 110 522 1.36e-43 164
MsG0280009230.01.T01 AT5G14610 30.457 394 247 11 96 478 162 539 1.60e-43 164
MsG0280009230.01.T01 AT5G14610 30.457 394 247 11 96 478 162 539 1.93e-43 164
MsG0280009230.01.T01 AT5G14610 30.457 394 247 11 96 478 170 547 2.30e-43 164
MsG0280009230.01.T01 AT3G01540 31.421 366 228 10 96 456 159 506 2.45e-43 163
MsG0280009230.01.T01 AT3G01540 31.421 366 228 10 96 456 159 506 2.45e-43 163
MsG0280009230.01.T01 AT3G01540 31.421 366 228 10 96 456 159 506 2.45e-43 163
MsG0280009230.01.T01 AT3G01540 31.421 366 228 10 96 456 159 506 2.45e-43 163
MsG0280009230.01.T01 AT3G09620 31.646 395 201 16 97 474 398 740 3.80e-43 165
MsG0280009230.01.T01 AT3G09620 31.646 395 201 16 97 474 399 741 3.95e-43 165
MsG0280009230.01.T01 AT3G22330 29.847 392 239 12 75 455 85 451 6.43e-43 162
MsG0280009230.01.T01 AT5G63120 34.375 320 175 11 108 415 178 474 1.01e-42 159
MsG0280009230.01.T01 AT5G63120 34.375 320 175 11 108 415 178 474 1.44e-42 159
MsG0280009230.01.T01 AT5G63120 34.375 320 175 11 108 415 178 474 1.44e-42 159
MsG0280009230.01.T01 AT5G63120 34.375 320 175 11 108 415 178 474 1.44e-42 159
MsG0280009230.01.T01 AT1G31970 33.240 358 208 9 114 458 133 472 2.96e-42 159
MsG0280009230.01.T01 AT2G33730 30.829 386 223 11 96 456 314 680 2.98e-42 161
MsG0280009230.01.T01 AT3G22310 30.352 369 226 11 96 455 117 463 5.89e-42 159
MsG0280009230.01.T01 AT5G14610 30.079 379 240 10 110 478 45 408 6.17e-42 158
MsG0280009230.01.T01 AT5G14610 30.079 379 240 10 110 478 45 408 6.17e-42 158
MsG0280009230.01.T01 AT3G22310 30.352 369 226 11 96 455 117 463 6.97e-42 159
MsG0280009230.01.T01 AT3G13920 30.585 376 233 12 94 464 28 380 1.01e-41 155
MsG0280009230.01.T01 AT3G13920 30.585 376 233 12 94 464 38 390 1.48e-41 154
MsG0280009230.01.T01 AT3G58510 29.932 441 272 13 44 467 103 523 1.92e-41 158
MsG0280009230.01.T01 AT3G58510 29.932 441 272 13 44 467 103 523 1.92e-41 158
MsG0280009230.01.T01 AT3G58510 29.932 441 272 13 44 467 103 523 1.92e-41 158
MsG0280009230.01.T01 AT3G58570 31.842 380 223 11 96 456 147 509 2.85e-41 158
MsG0280009230.01.T01 AT3G13920 30.585 376 233 12 94 464 38 390 4.83e-41 153
MsG0280009230.01.T01 AT3G13920 30.585 376 233 12 94 464 42 394 4.96e-41 153
MsG0280009230.01.T01 AT5G14610 30.372 349 226 7 110 456 244 577 1.03e-40 157
MsG0280009230.01.T01 AT1G54270 30.053 376 235 11 94 464 38 390 1.78e-40 152
MsG0280009230.01.T01 AT5G26742 30.259 347 221 7 128 468 42 373 3.29e-40 155
MsG0280009230.01.T01 AT3G06480 32.537 335 202 9 96 424 436 752 3.94e-40 155
MsG0280009230.01.T01 AT3G06980 28.676 408 267 9 79 467 358 760 5.11e-40 155
MsG0280009230.01.T01 AT3G19760 26.720 378 255 9 90 465 30 387 6.19e-40 150
MsG0280009230.01.T01 AT3G02065 31.186 388 232 11 96 470 111 476 4.05e-39 150
MsG0280009230.01.T01 AT3G02065 31.186 388 232 11 96 470 111 476 4.05e-39 150
MsG0280009230.01.T01 AT1G51380 26.720 378 255 10 90 465 17 374 4.48e-39 147
MsG0280009230.01.T01 AT4G09730 29.801 453 265 20 95 529 112 529 5.20e-39 151
MsG0280009230.01.T01 AT3G13920 30.053 376 230 13 94 464 38 385 1.17e-38 146
MsG0280009230.01.T01 AT1G72730 29.189 370 236 10 95 460 41 388 3.40e-38 145
MsG0280009230.01.T01 AT1G54270 29.521 376 232 12 94 464 38 385 1.26e-37 144
MsG0280009230.01.T01 AT5G11170 29.032 372 235 12 92 456 43 392 1.88e-37 144
MsG0280009230.01.T01 AT5G11200 29.032 372 235 12 92 456 43 392 1.88e-37 144
MsG0280009230.01.T01 AT3G02065 31.579 342 207 10 124 456 2 325 9.88e-37 140
MsG0280009230.01.T01 AT1G28180 31.897 348 201 12 125 460 3 326 4.06e-36 139
MsG0280009230.01.T01 AT5G14610 30.154 325 209 7 96 417 170 479 5.28e-36 141
MsG0280009230.01.T01 AT3G16840 26.096 456 274 11 96 491 191 643 6.06e-36 143
MsG0280009230.01.T01 AT3G16840 26.096 456 274 11 96 491 192 644 6.47e-36 143
MsG0280009230.01.T01 AT3G09720 28.682 387 247 10 85 465 130 493 8.55e-36 141
MsG0280009230.01.T01 AT3G09720 28.682 387 247 10 85 465 130 493 8.55e-36 141
MsG0280009230.01.T01 AT4G15850 26.214 412 238 11 102 454 38 442 5.32e-35 138
MsG0280009230.01.T01 AT5G62190 32.258 341 208 10 121 453 122 447 1.16e-34 139
MsG0280009230.01.T01 AT5G11170 29.697 330 203 12 134 456 2 309 6.19e-32 126
MsG0280009230.01.T01 AT5G11200 26.521 411 236 13 92 456 43 433 2.74e-31 127
MsG0280009230.01.T01 AT1G12770 24.706 425 273 10 72 453 88 508 4.82e-29 121
MsG0280009230.01.T01 AT1G12770 24.706 425 273 10 72 453 88 508 4.82e-29 121
MsG0280009230.01.T01 AT5G11200 25.714 420 246 13 92 456 43 451 1.77e-27 116
MsG0280009230.01.T01 AT4G34910 25.441 397 238 10 95 445 46 430 3.89e-26 113
MsG0280009230.01.T01 AT5G19210 27.606 355 220 11 113 444 94 434 8.22e-22 99.0
MsG0280009230.01.T01 AT3G53110 28.087 413 259 16 62 457 61 452 8.24e-22 99.4
MsG0280009230.01.T01 AT1G51380 26.619 278 183 9 90 365 17 275 3.18e-21 94.4
MsG0280009230.01.T01 AT1G51380 26.991 226 147 7 90 314 17 225 1.54e-17 84.0
MsG0280009230.01.T01 AT1G51380 26.991 226 147 7 90 314 17 225 2.48e-17 83.6
MsG0280009230.01.T01 AT1G59990 29.808 208 121 6 96 284 81 282 1.59e-15 80.1
MsG0280009230.01.T01 AT1G59990 33.981 103 66 2 352 453 425 526 8.42e-13 71.2
MsG0280009230.01.T01 AT1G59990 29.808 208 121 6 96 284 81 282 1.65e-15 80.1
MsG0280009230.01.T01 AT1G59990 33.981 103 66 2 352 453 425 526 7.17e-13 71.6
MsG0280009230.01.T01 AT1G28180 38.333 120 57 5 125 234 3 115 2.15e-11 61.6

Find 104 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAATTCTTCAGGAATT+AGG 0.178127 2:+48367454 None:intergenic
CAAACTTTGGGAAGGGTTAT+TGG 0.183409 2:-48371106 MsG0280009230.01.T01:CDS
TGTTCACCGCCTTGATTTAC+AGG 0.222982 2:-48366879 MsG0280009230.01.T01:CDS
TCCAAAGGTATTGGAACTTT+TGG 0.254345 2:-48370196 MsG0280009230.01.T01:CDS
ATACCTTTGGAAGTATATTA+AGG 0.291178 2:+48370208 None:intergenic
AGCTTTGCAAAAGTTGAAAA+AGG 0.292081 2:+48369051 None:intergenic
GATTCGGCCATGATTGGTTT+TGG 0.300223 2:+48372572 None:intergenic
GCTGATCTTCTTAAGTTCAT+TGG 0.307041 2:-48369127 MsG0280009230.01.T01:CDS
CGAAGAAATTGCAATTCTTC+AGG 0.312311 2:+48367447 None:intergenic
TTAGACTGTTTAAATATTCA+TGG 0.317326 2:-48369103 MsG0280009230.01.T01:CDS
GAAGCTGAGCGCATTGTTAA+AGG 0.326789 2:-48371064 MsG0280009230.01.T01:CDS
AACTAGAGAGCTTGCCATTC+AGG 0.336917 2:-48371293 MsG0280009230.01.T01:intron
CTCTGGCCAAAGAGGCTTAT+AGG 0.347055 2:-48366949 MsG0280009230.01.T01:CDS
TAATATACTTCCAAAGGTAT+TGG 0.347791 2:-48370205 MsG0280009230.01.T01:CDS
CACTGTTGAAGGATTGGAAC+AGG 0.351265 2:-48369266 MsG0280009230.01.T01:CDS
TCTTGTAACTGTCGTTGATT+TGG 0.359039 2:+48372519 None:intergenic
GGCTTATAGGTCATATATAT+TGG 0.360206 2:-48366936 MsG0280009230.01.T01:CDS
AGGTTATCATTCACAAACTT+TGG 0.361306 2:-48371119 MsG0280009230.01.T01:CDS
AGCGATTCCGCCACTATTGA+TGG 0.364721 2:-48371446 MsG0280009230.01.T01:CDS
GGTGCTGCGAGGACGGGTTC+TGG 0.370158 2:-48371409 MsG0280009230.01.T01:CDS
TTGTCGGATTCGGCCATGAT+TGG 0.371208 2:+48372566 None:intergenic
ATATGACCTATAAGCCTCTT+TGG 0.372379 2:+48366943 None:intergenic
TCCAAAAGTTCCAATACCTT+TGG 0.380030 2:+48370195 None:intergenic
TGATGAAGCAGACAGGATAT+TGG 0.387298 2:-48370262 MsG0280009230.01.T01:CDS
GTGGTTGTCGTTGTCGGATT+CGG 0.395506 2:+48372556 None:intergenic
GAGCTGTTCTACCAACTCTA+TGG 0.395862 2:+48367511 None:intergenic
GCAATTTCTTCGCTACTTGA+AGG 0.402234 2:-48367436 MsG0280009230.01.T01:intron
GGTTATCATTCACAAACTTT+GGG 0.404251 2:-48371118 MsG0280009230.01.T01:CDS
AAAATGTTACCTGAGTCATA+TGG 0.414115 2:+48372213 None:intergenic
TATTGGTGGTGTGGGTAGAA+AGG 0.417674 2:-48371089 MsG0280009230.01.T01:CDS
TGAGATGTGGTTGTCGTTGT+CGG 0.421675 2:+48372550 None:intergenic
TGTTCTTGGTGCTGCGAGGA+CGG 0.423795 2:-48371416 MsG0280009230.01.T01:CDS
AGAAGCACCTTTGGTTCATC+AGG 0.435836 2:+48367630 None:intergenic
GTTCTTGGTGCTGCGAGGAC+GGG 0.441728 2:-48371415 MsG0280009230.01.T01:CDS
ATTGGTGGTGTGGGTAGAAA+GGG 0.443352 2:-48371088 MsG0280009230.01.T01:CDS
GGAAGGGTTATTGGTGGTGT+GGG 0.448057 2:-48371097 MsG0280009230.01.T01:CDS
GGGAAGGGTTATTGGTGGTG+TGG 0.455388 2:-48371098 MsG0280009230.01.T01:CDS
TTCAAATGTACAATCTCAAC+TGG 0.456302 2:-48367098 MsG0280009230.01.T01:intron
GACCACCTTCAGAATACAAA+AGG 0.463946 2:-48371004 MsG0280009230.01.T01:CDS
GAAAACAAAAGCAGAATTCT+CGG 0.465182 2:-48369081 MsG0280009230.01.T01:CDS
TTTACACCTCGTAATGGAAC+TGG 0.481699 2:-48371334 MsG0280009230.01.T01:CDS
GTCTATGTTGATGTAGATGT+TGG 0.487585 2:-48369386 MsG0280009230.01.T01:CDS
GCAGGTCACTGTTGAAGGAT+TGG 0.488024 2:-48369272 MsG0280009230.01.T01:intron
TTCAGCCACACAAACAAAGA+AGG 0.488772 2:-48369672 MsG0280009230.01.T01:intron
TGCTTAATTTCAGGCAGCAA+AGG 0.489803 2:-48367158 MsG0280009230.01.T01:intron
GTTATCTCAACGTACTTCTC+AGG 0.490712 2:-48372258 MsG0280009230.01.T01:CDS
TTGATGGGAAAGGATGTTCT+TGG 0.491150 2:-48371430 MsG0280009230.01.T01:CDS
AAATGTTACCTGAGTCATAT+GGG 0.494393 2:+48372214 None:intergenic
TTCCAAACCAAAACCAATCA+TGG 0.502146 2:-48372579 MsG0280009230.01.T01:exon
AACAACAAAACGCTTGGCAC+AGG 0.502377 2:+48369228 None:intergenic
GAAGAGAAGAATGATAAAGA+TGG 0.502543 2:-48372374 MsG0280009230.01.T01:CDS
ACATCCTTTCCCATCAATAG+TGG 0.507013 2:+48371436 None:intergenic
TCGATGCAGGTCACTGTTGA+AGG 0.512599 2:-48369277 MsG0280009230.01.T01:intron
GTGCAATTTACACCTCGTAA+TGG 0.516728 2:-48371340 MsG0280009230.01.T01:CDS
CGTTTATCATTTGAACACTC+TGG 0.518088 2:-48366966 MsG0280009230.01.T01:CDS
ATCATTCACAAACTTTGGGA+AGG 0.522110 2:-48371114 MsG0280009230.01.T01:CDS
GCTCGTGGGGAAGGTGGAAA+AGG 0.522429 2:-48367492 MsG0280009230.01.T01:CDS
TTGTACAACAATTCCACAGC+TGG 0.523673 2:+48371364 None:intergenic
TGTACTGATGTTGCTGCTCG+TGG 0.524024 2:-48369010 MsG0280009230.01.T01:CDS
AAAATATAACATACCACAGC+AGG 0.526613 2:+48368977 None:intergenic
ATATAATGCACATTCTATGA+AGG 0.531303 2:-48366912 MsG0280009230.01.T01:CDS
ACATCTACATCAACATAGAC+AGG 0.540616 2:+48369389 None:intergenic
TGAATGGCAAGCTCTCTAGT+TGG 0.540963 2:+48371295 None:intergenic
GGTAGAACAGCTCGTGGGGA+AGG 0.544261 2:-48367501 MsG0280009230.01.T01:CDS
ACAAACCTTCTTTGTTTGTG+TGG 0.544416 2:+48369667 None:intergenic
AAAGTTGTACCTGTAAATCA+AGG 0.551261 2:+48366870 None:intergenic
AGCACCTTTGGTTCATCAGG+TGG 0.559062 2:+48367633 None:intergenic
TCATTCACAAACTTTGGGAA+GGG 0.560825 2:-48371113 MsG0280009230.01.T01:CDS
CAGGAATATATCCATAGAGT+TGG 0.562337 2:-48367522 MsG0280009230.01.T01:CDS
TCATGATTGATGAAGCAGAC+AGG 0.562765 2:-48370269 MsG0280009230.01.T01:CDS
GATATTGGAATCAAACTTCG+AGG 0.564037 2:-48370247 MsG0280009230.01.T01:CDS
TTTGAACACTCTGGCCAAAG+AGG 0.565593 2:-48366957 MsG0280009230.01.T01:CDS
TCAAATGCATACTCTTTCAC+AGG 0.570584 2:+48367133 None:intergenic
AGAACAGCTCGTGGGGAAGG+TGG 0.571711 2:-48367498 MsG0280009230.01.T01:CDS
GATCCTTAATATACTTCCAA+AGG 0.575304 2:-48370211 MsG0280009230.01.T01:CDS
TCTATGTTGATGTAGATGTT+GGG 0.575438 2:-48369385 MsG0280009230.01.T01:CDS
ATACAGAACAACAAAACGCT+TGG 0.583322 2:+48369222 None:intergenic
TCCGCCACTATTGATGGGAA+AGG 0.586065 2:-48371440 MsG0280009230.01.T01:CDS
ACTTTGGGAAGGGTTATTGG+TGG 0.589313 2:-48371103 MsG0280009230.01.T01:CDS
GCGATTCCGCCACTATTGAT+GGG 0.593656 2:-48371445 MsG0280009230.01.T01:CDS
AATCTGTTGATTGCAACGCC+TGG 0.596623 2:-48371037 MsG0280009230.01.T01:CDS
TGTAGATGTTGGGAGAGAAA+AGG 0.599377 2:-48369375 MsG0280009230.01.T01:intron
TGGTGAAGCAATGAAGCTGC+TGG 0.606760 2:+48372603 None:intergenic
ACAACAAAACGCTTGGCACA+GGG 0.609917 2:+48369229 None:intergenic
TCCTTTCCCATCAATAGTGG+CGG 0.616524 2:+48371439 None:intergenic
AGGTGTCTGAAAAGACAAGC+GGG 0.623455 2:+48369412 None:intergenic
GTGGCGAGTGAGCTAATGAA+AGG 0.627012 2:-48371139 MsG0280009230.01.T01:CDS
TGATCCACCTGATGAACCAA+AGG 0.628732 2:-48367637 MsG0280009230.01.T01:intron
AGCATGTGTGTATACCTGAA+TGG 0.632411 2:+48371279 None:intergenic
GAGTTGGTAGAACAGCTCGT+GGG 0.632706 2:-48367506 MsG0280009230.01.T01:CDS
AGGTGGTCAAGAAGACGACC+AGG 0.633657 2:+48371019 None:intergenic
AGTTGGTAGAACAGCTCGTG+GGG 0.633736 2:-48367505 MsG0280009230.01.T01:CDS
AGAGTTGGTAGAACAGCTCG+TGG 0.642971 2:-48367507 MsG0280009230.01.T01:CDS
TGGACTTGACATACCTGCTG+TGG 0.647715 2:-48368990 MsG0280009230.01.T01:intron
AGTGTTCAAATGATAAACGC+TGG 0.651201 2:+48366970 None:intergenic
GAGGTGTCTGAAAAGACAAG+CGG 0.655705 2:+48369411 None:intergenic
TGAACTTAAGAAGATCAGCA+TGG 0.656163 2:+48369131 None:intergenic
TCATTACTCAGAATTCCAGA+AGG 0.674765 2:+48372299 None:intergenic
ACTGTTGAAGGATTGGAACA+GGG 0.682019 2:-48369265 MsG0280009230.01.T01:CDS
AGGATGTTCTTGGTGCTGCG+AGG 0.692441 2:-48371420 MsG0280009230.01.T01:CDS
ATTGGAATCAAACTTCGAGG+AGG 0.698846 2:-48370244 MsG0280009230.01.T01:CDS
TCTACATCAACATAGACAGG+AGG 0.714076 2:+48369392 None:intergenic
ATAACACCAGTTCCATTACG+AGG 0.731124 2:+48371328 None:intergenic
GTTGTACCTGTAAATCAAGG+CGG 0.751531 2:+48366873 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAATTCATGATTC+GGG + Chr2:48372263-48372282 None:intergenic 15.0%
!! AAAACATAAAATCAAATTGA+GGG - Chr2:48368710-48368729 MsG0280009230.01.T01:intron 15.0%
!! ACTAATGATAAAAAATGTAA+AGG - Chr2:48371545-48371564 MsG0280009230.01.T01:intron 15.0%
!! ATCAAAATAAAATTTAAACG+AGG + Chr2:48368194-48368213 None:intergenic 15.0%
!! ATTCATATATAAAAACTTGA+AGG - Chr2:48368461-48368480 MsG0280009230.01.T01:intron 15.0%
!! CAAAAATAAAATTCATGATT+CGG + Chr2:48372264-48372283 None:intergenic 15.0%
!! TAAAACATAAAATCAAATTG+AGG - Chr2:48368709-48368728 MsG0280009230.01.T01:intron 15.0%
!! TATCTTGTTAATACATTTAA+AGG - Chr2:48369551-48369570 MsG0280009230.01.T01:intron 15.0%
!! TATTTCAAAAAACAAAGAAT+AGG + Chr2:48369978-48369997 None:intergenic 15.0%
!!! GGTTTTTTATTTTAAAAAAC+AGG + Chr2:48371101-48371120 None:intergenic 15.0%
!!! GTATTAGATCATTTTTTAAT+TGG + Chr2:48372392-48372411 None:intergenic 15.0%
!!! TTTTTACTAATTGATCAAAT+AGG - Chr2:48367285-48367304 MsG0280009230.01.T01:intron 15.0%
!! AAAAAGAAATAAAACTGAGT+TGG + Chr2:48371351-48371370 None:intergenic 20.0%
!! AAAAGAAATAAAACTGAGTT+GGG + Chr2:48371350-48371369 None:intergenic 20.0%
!! AAACATAAAATCAAATTGAG+GGG - Chr2:48368711-48368730 MsG0280009230.01.T01:intron 20.0%
!! AAATTAACAGAACATAACTA+TGG + Chr2:48371717-48371736 None:intergenic 20.0%
!! AACAGTAGAATATATCTTAA+AGG - Chr2:48370775-48370794 MsG0280009230.01.T01:intron 20.0%
!! ATCATTATCATTATAACTTC+TGG - Chr2:48369104-48369123 MsG0280009230.01.T01:CDS 20.0%
!! CATGTAATTAAGAATCAAAT+CGG + Chr2:48368494-48368513 None:intergenic 20.0%
!! GATATATAAACTAACATAGA+AGG + Chr2:48369087-48369106 None:intergenic 20.0%
!! TACAAAAACAATTTAACGTT+AGG + Chr2:48367640-48367659 None:intergenic 20.0%
!! TATGCTAGATTATACAATAA+GGG + Chr2:48367594-48367613 None:intergenic 20.0%
!! TCATAATTTACTTCAATGAA+TGG - Chr2:48367952-48367971 MsG0280009230.01.T01:intron 20.0%
!! TGAAATTTGGATGAAAAAAT+AGG - Chr2:48370806-48370825 MsG0280009230.01.T01:intron 20.0%
!! TGTTAATACATTTAAAGGTT+TGG - Chr2:48369556-48369575 MsG0280009230.01.T01:intron 20.0%
!! TGTTATGCTTATATTGTAAT+GGG - Chr2:48372144-48372163 MsG0280009230.01.T01:intron 20.0%
!! TTAAACTGTTTATCTAAACA+TGG + Chr2:48367335-48367354 None:intergenic 20.0%
!! TTAGACTGTTTAAATATTCA+TGG - Chr2:48370339-48370358 MsG0280009230.01.T01:intron 20.0%
!! TTATGCTAGATTATACAATA+AGG + Chr2:48367595-48367614 None:intergenic 20.0%
!! TTATTGTATAATCTAGCATA+AGG - Chr2:48367594-48367613 MsG0280009230.01.T01:intron 20.0%
!!! AGTTTATAAAGACACAATTT+TGG - Chr2:48367481-48367500 MsG0280009230.01.T01:CDS 20.0%
!!! ATATTTTCCTGTTTAATTAC+AGG - Chr2:48369995-48370014 MsG0280009230.01.T01:intron 20.0%
!!! ATTGAAAATAAAAGAGTGTT+TGG + Chr2:48371421-48371440 None:intergenic 20.0%
!!! CAAATTGTTTTTTCGTATTA+TGG - Chr2:48367815-48367834 MsG0280009230.01.T01:intron 20.0%
!!! CTAAGCTTTAAAAATAAAAG+AGG + Chr2:48371452-48371471 None:intergenic 20.0%
!!! CTGCTTATTTTTTTATTGAT+GGG - Chr2:48369024-48369043 MsG0280009230.01.T01:CDS 20.0%
!!! GCTTTTTTATATCTAGATTT+TGG - Chr2:48369675-48369694 MsG0280009230.01.T01:CDS 20.0%
!!! TCTGCTTATTTTTTTATTGA+TGG - Chr2:48369023-48369042 MsG0280009230.01.T01:CDS 20.0%
!!! TTATTTTTGTGCTTAATTTC+AGG - Chr2:48372275-48372294 MsG0280009230.01.T01:CDS 20.0%
!!! TTGAAAATAAAAGAGTGTTT+GGG + Chr2:48371420-48371439 None:intergenic 20.0%
!!! TTGTAACATTCTAAAAATAG+TGG - Chr2:48369436-48369455 MsG0280009230.01.T01:intron 20.0%
!!! TTTTCTTTCTAAACAACAAA+AGG + Chr2:48368689-48368708 None:intergenic 20.0%
! AAACAGTCTCATATAACTTA+TGG - Chr2:48367757-48367776 MsG0280009230.01.T01:intron 25.0%
! AACAAGATACCACAAATATT+TGG + Chr2:48369540-48369559 None:intergenic 25.0%
! AAGTAAATTATGAGTCTGTT+TGG + Chr2:48367945-48367964 None:intergenic 25.0%
! AATAAGCAGAGATAAACAAT+AGG + Chr2:48369013-48369032 None:intergenic 25.0%
! AATAGGTAGAAATAAAACGA+AGG - Chr2:48367302-48367321 MsG0280009230.01.T01:intron 25.0%
! ACAAGATACCACAAATATTT+GGG + Chr2:48369539-48369558 None:intergenic 25.0%
! ACAAGATGCTAAATAATACA+AGG - Chr2:48369305-48369324 MsG0280009230.01.T01:intron 25.0%
! AGGACATATACAAAAGAAAA+AGG + Chr2:48368993-48369012 None:intergenic 25.0%
! ATAACAACCAATTCACATAT+AGG + Chr2:48371234-48371253 None:intergenic 25.0%
! ATAAGTTATATGAGACTGTT+TGG + Chr2:48367758-48367777 None:intergenic 25.0%
! ATAATGAAGATACTGAAAGA+AGG - Chr2:48370630-48370649 MsG0280009230.01.T01:intron 25.0%
! ATACCAATCAAAAAAAGTGA+TGG - Chr2:48370257-48370276 MsG0280009230.01.T01:CDS 25.0%
! ATATAAGCATAACACATTCA+AGG + Chr2:48372138-48372157 None:intergenic 25.0%
! ATATAATGCACATTCTATGA+AGG - Chr2:48372530-48372549 MsG0280009230.01.T01:CDS 25.0%
! ATATCTTACACATTATCATC+TGG - Chr2:48372427-48372446 MsG0280009230.01.T01:CDS 25.0%
! ATGGGATTATCAATGTTAAT+TGG + Chr2:48368801-48368820 None:intergenic 25.0%
! CGATTTGATTCTTAATTACA+TGG - Chr2:48368492-48368511 MsG0280009230.01.T01:intron 25.0%
! GATCTTAAAAGTTGCAATAT+AGG - Chr2:48372099-48372118 MsG0280009230.01.T01:intron 25.0%
! GGACATATACAAAAGAAAAA+GGG + Chr2:48368992-48369011 None:intergenic 25.0%
! GTACAAAAGTTTCAACATAA+AGG - Chr2:48371575-48371594 MsG0280009230.01.T01:intron 25.0%
! GTCTAACATATGTTATTCTA+TGG - Chr2:48371893-48371912 MsG0280009230.01.T01:intron 25.0%
! GTGTTATGCTTATATTGTAA+TGG - Chr2:48372143-48372162 MsG0280009230.01.T01:intron 25.0%
! GTTAGTTGTTCTGTTTAATT+TGG - Chr2:48371644-48371663 MsG0280009230.01.T01:intron 25.0%
! GTTATGCTTATATTGTAATG+GGG - Chr2:48372145-48372164 MsG0280009230.01.T01:intron 25.0%
! TAAGTTATATGAGACTGTTT+GGG + Chr2:48367757-48367776 None:intergenic 25.0%
! TAATCCCATAATAGGAATTA+AGG - Chr2:48368812-48368831 MsG0280009230.01.T01:intron 25.0%
! TAATGAAGATACTGAAAGAA+GGG - Chr2:48370631-48370650 MsG0280009230.01.T01:intron 25.0%
! TAGAATATATCTTAAAGGCT+TGG - Chr2:48370780-48370799 MsG0280009230.01.T01:intron 25.0%
! TCTTAGTACTATTGTAAAAC+TGG - Chr2:48371668-48371687 MsG0280009230.01.T01:intron 25.0%
! TGACAACTTAATTATATTGC+AGG + Chr2:48370520-48370539 None:intergenic 25.0%
! TGCTGTAAAGAAAATTTCAA+AGG + Chr2:48370118-48370137 None:intergenic 25.0%
!! AACATTGATAATCCCATAAT+AGG - Chr2:48368804-48368823 MsG0280009230.01.T01:intron 25.0%
!! AAGTTTGTAAATGTTGTTTG+TGG - Chr2:48367452-48367471 MsG0280009230.01.T01:CDS 25.0%
!! ATACCTTTGGAAGTATATTA+AGG + Chr2:48369237-48369256 None:intergenic 25.0%
!! CTAATTTTATACACTTCCAA+GGG + Chr2:48372188-48372207 None:intergenic 25.0%
!! TAATATACTTCCAAAGGTAT+TGG - Chr2:48369237-48369256 MsG0280009230.01.T01:CDS 25.0%
!! TCTCATCACATTTTACATAA+CGG - Chr2:48372594-48372613 MsG0280009230.01.T01:five_prime_UTR 25.0%
!!! AAGGTGCTTCTTATTTTTTA+TGG - Chr2:48371824-48371843 MsG0280009230.01.T01:intron 25.0%
!!! ATGGTTTTGTAGACAAATTA+CGG - Chr2:48368593-48368612 MsG0280009230.01.T01:intron 25.0%
!!! TAAAAAATAAGAAGCACCTT+TGG + Chr2:48371824-48371843 None:intergenic 25.0%
!!! TATTGCAACTTTTAAGATCA+AGG + Chr2:48372098-48372117 None:intergenic 25.0%
!!! TTTTGAAAGTTGGAAATCTT+GGG - Chr2:48369933-48369952 MsG0280009230.01.T01:intron 25.0%
!!! TTTTTGAAAGTTGGAAATCT+TGG - Chr2:48369932-48369951 MsG0280009230.01.T01:intron 25.0%
!!! TTTTTTGCCTATATGTGAAT+TGG - Chr2:48371224-48371243 MsG0280009230.01.T01:intron 25.0%
AAAAGTCTCATTAGTGCTTA+TGG - Chr2:48367894-48367913 MsG0280009230.01.T01:intron 30.0%
AAAATAAAAAACCCTGAGTG+TGG - Chr2:48371108-48371127 MsG0280009230.01.T01:CDS 30.0%
AAAATAAGCCTAATCCAAAC+TGG + Chr2:48367379-48367398 None:intergenic 30.0%
AAAATATAACATACCACAGC+AGG + Chr2:48370468-48370487 None:intergenic 30.0%
AAAATGTTACCTGAGTCATA+TGG + Chr2:48367232-48367251 None:intergenic 30.0%
AAACAGAACAACTAACAACT+AGG + Chr2:48371640-48371659 None:intergenic 30.0%
AAAGTTGTACCTGTAAATCA+AGG + Chr2:48372575-48372594 None:intergenic 30.0%
AAATGTTACCTGAGTCATAT+GGG + Chr2:48367231-48367250 None:intergenic 30.0%
AATGAAGATACTGAAAGAAG+GGG - Chr2:48370632-48370651 MsG0280009230.01.T01:intron 30.0%
ACAACTAACAACTAGGAATA+TGG + Chr2:48371633-48371652 None:intergenic 30.0%
AGATTCTACTCTCTTTATAG+GGG - Chr2:48372031-48372050 MsG0280009230.01.T01:intron 30.0%
AGCTTTGCAAAAGTTGAAAA+AGG + Chr2:48370394-48370413 None:intergenic 30.0%
AGGTTATCATTCACAAACTT+TGG - Chr2:48368323-48368342 MsG0280009230.01.T01:intron 30.0%
ATAAAATCAAATTGAGGGGA+AGG - Chr2:48368715-48368734 MsG0280009230.01.T01:intron 30.0%
ATAATTTCTTAGAGCCAGTT+TGG - Chr2:48367362-48367381 MsG0280009230.01.T01:intron 30.0%
ATATAGGCAAAAAACAGAGA+AGG + Chr2:48371218-48371237 None:intergenic 30.0%
ATCATTATAACTTCTGGTGT+TGG - Chr2:48369110-48369129 MsG0280009230.01.T01:CDS 30.0%
ATGCATTTCGTTCATTGTAA+TGG - Chr2:48368574-48368593 MsG0280009230.01.T01:intron 30.0%
ATTGCAATTCTTCAGGAATT+AGG + Chr2:48371991-48372010 None:intergenic 30.0%
CAACTAACAACTAGGAATAT+GGG + Chr2:48371632-48371651 None:intergenic 30.0%
CAGAAAAAGATCTCGTAAAT+TGG - Chr2:48366968-48366987 MsG0280009230.01.T01:CDS 30.0%
CAGATTCTACTCTCTTTATA+GGG - Chr2:48372030-48372049 MsG0280009230.01.T01:intron 30.0%
CTCACCTTAATTCCTATTAT+GGG + Chr2:48368819-48368838 None:intergenic 30.0%
CTTCTCATTTCTAACAGAAA+AGG - Chr2:48369733-48369752 MsG0280009230.01.T01:intron 30.0%
CTTTAAACTCTATGTTTGTG+AGG - Chr2:48371372-48371391 MsG0280009230.01.T01:CDS 30.0%
GAAAACAAAAGCAGAATTCT+CGG - Chr2:48370361-48370380 MsG0280009230.01.T01:intron 30.0%
GAAGAGAAGAATGATAAAGA+TGG - Chr2:48367068-48367087 MsG0280009230.01.T01:intron 30.0%
GAATTGGTTGTTATACCTTT+AGG - Chr2:48371240-48371259 MsG0280009230.01.T01:intron 30.0%
GAGTTGACAAAATTGAAACA+AGG + Chr2:48369845-48369864 None:intergenic 30.0%
GATCCTTAATATACTTCCAA+AGG - Chr2:48369231-48369250 MsG0280009230.01.T01:CDS 30.0%
GATTTATTCTTCATCGTGTA+TGG - Chr2:48368951-48368970 MsG0280009230.01.T01:intron 30.0%
GGCTTATAGGTCATATATAT+TGG - Chr2:48372506-48372525 MsG0280009230.01.T01:CDS 30.0%
GGTTATCATTCACAAACTTT+GGG - Chr2:48368324-48368343 MsG0280009230.01.T01:intron 30.0%
TATAGGCAAAAAACAGAGAA+GGG + Chr2:48371217-48371236 None:intergenic 30.0%
TCAGATTCTACTCTCTTTAT+AGG - Chr2:48372029-48372048 MsG0280009230.01.T01:intron 30.0%
TCTATGTTGATGTAGATGTT+GGG - Chr2:48370057-48370076 MsG0280009230.01.T01:intron 30.0%
TGAAAAACAACAACAACAAG+AGG - Chr2:48367001-48367020 MsG0280009230.01.T01:intron 30.0%
TGTATGACATGTTCATAACA+TGG + Chr2:48367853-48367872 None:intergenic 30.0%
TGTGTAAGATATGTTGCAAT+TGG + Chr2:48372419-48372438 None:intergenic 30.0%
TTACTGTTGGATATGAAATC+CGG - Chr2:48370697-48370716 MsG0280009230.01.T01:intron 30.0%
TTCAAATGTACAATCTCAAC+TGG - Chr2:48372344-48372363 MsG0280009230.01.T01:CDS 30.0%
! AACTTTTGCAAAGCTGAAAA+AGG - Chr2:48370399-48370418 MsG0280009230.01.T01:intron 30.0%
! AAGCACTAATGAGACTTTTT+GGG + Chr2:48367893-48367912 None:intergenic 30.0%
! ACTTTTGCAAAGCTGAAAAA+GGG - Chr2:48370400-48370419 MsG0280009230.01.T01:intron 30.0%
! AGCAGAATAAACTACTCTTT+TGG + Chr2:48369340-48369359 None:intergenic 30.0%
! CCTAATTTTATACACTTCCA+AGG + Chr2:48372189-48372208 None:intergenic 30.0%
! CCTTGGAAGTGTATAAAATT+AGG - Chr2:48372186-48372205 MsG0280009230.01.T01:intron 30.0%
! CTTTAAAAAGGAAGGTTGTA+TGG + Chr2:48370583-48370602 None:intergenic 30.0%
! GAAACAAGGATTTGCTTTAA+GGG + Chr2:48369831-48369850 None:intergenic 30.0%
! TAAGCACTAATGAGACTTTT+TGG + Chr2:48367894-48367913 None:intergenic 30.0%
! TAGTAGGTAGGTATATTTTC+TGG - Chr2:48369493-48369512 MsG0280009230.01.T01:intron 30.0%
! TGAAACAAGGATTTGCTTTA+AGG + Chr2:48369832-48369851 None:intergenic 30.0%
! TGAATCCTTTTGTATTCTGA+AGG + Chr2:48368446-48368465 None:intergenic 30.0%
! TGAATTCTGTTGAGTAGTTT+TGG - Chr2:48368880-48368899 MsG0280009230.01.T01:intron 30.0%
! TGGAAGTGTATAAAATTAGG+CGG - Chr2:48372189-48372208 MsG0280009230.01.T01:intron 30.0%
!!! ACACCATCACTTTTTTTGAT+TGG + Chr2:48370263-48370282 None:intergenic 30.0%
!!! CATTTTTTAATTGGCACTTG+AGG + Chr2:48372383-48372402 None:intergenic 30.0%
!!! TGCATGCTATTTTTGAAAGT+TGG - Chr2:48369923-48369942 MsG0280009230.01.T01:intron 30.0%
!!! TGGTTTTGTAGACAAATTAC+GGG - Chr2:48368594-48368613 MsG0280009230.01.T01:intron 30.0%
AAAAGAAAAGACCCTTATCG+AGG + Chr2:48368926-48368945 None:intergenic 35.0%
AAACTCTATGTTTGTGAGGA+TGG - Chr2:48371376-48371395 MsG0280009230.01.T01:CDS 35.0%
AAAGAAAAGACCCTTATCGA+GGG + Chr2:48368925-48368944 None:intergenic 35.0%
AAATCCGGTGGTAAATGTTA+GGG - Chr2:48370712-48370731 MsG0280009230.01.T01:intron 35.0%
AACAACTAGGAATATGGGAT+GGG + Chr2:48371627-48371646 None:intergenic 35.0%
AACTCTATGTTTGTGAGGAT+GGG - Chr2:48371377-48371396 MsG0280009230.01.T01:CDS 35.0%
AAGTGTATAAAATTAGGCGG+TGG - Chr2:48372192-48372211 MsG0280009230.01.T01:intron 35.0%
AATAGTGCTTCTCTTCTAGT+AGG - Chr2:48369477-48369496 MsG0280009230.01.T01:intron 35.0%
ACATCTACATCAACATAGAC+AGG + Chr2:48370056-48370075 None:intergenic 35.0%
AGCATACAATCAGGAAAACT+AGG + Chr2:48369648-48369667 None:intergenic 35.0%
AGTGTTCAAATGATAAACGC+TGG + Chr2:48372475-48372494 None:intergenic 35.0%
ATAAGTTATCAGTCCTCTCT+TGG - Chr2:48368641-48368660 MsG0280009230.01.T01:intron 35.0%
ATACAGAACAACAAAACGCT+TGG + Chr2:48370223-48370242 None:intergenic 35.0%
ATAGGCAAAAAACAGAGAAG+GGG + Chr2:48371216-48371235 None:intergenic 35.0%
ATATGACCTATAAGCCTCTT+TGG + Chr2:48372502-48372521 None:intergenic 35.0%
ATGAAGATACTGAAAGAAGG+GGG - Chr2:48370633-48370652 MsG0280009230.01.T01:intron 35.0%
ATTCAAACTGATACCAAGAG+AGG + Chr2:48368657-48368676 None:intergenic 35.0%
CAACTCTATGGATATATTCC+TGG + Chr2:48371922-48371941 None:intergenic 35.0%
CAGGAATATATCCATAGAGT+TGG - Chr2:48371920-48371939 MsG0280009230.01.T01:intron 35.0%
CCATAATAGGAATTAAGGTG+AGG - Chr2:48368817-48368836 MsG0280009230.01.T01:intron 35.0%
CCTCACCTTAATTCCTATTA+TGG + Chr2:48368820-48368839 None:intergenic 35.0%
CGAAGAAATTGCAATTCTTC+AGG + Chr2:48371998-48372017 None:intergenic 35.0%
CGTTTATCATTTGAACACTC+TGG - Chr2:48372476-48372495 MsG0280009230.01.T01:CDS 35.0%
CTGGATATCTGTACTTGTAA+AGG - Chr2:48369512-48369531 MsG0280009230.01.T01:intron 35.0%
GACATTCGAATAAAACAGTC+AGG + Chr2:48371079-48371098 None:intergenic 35.0%
GAGTAAGAGAGATTCACAAA+TGG + Chr2:48371194-48371213 None:intergenic 35.0%
GATATTGGAATCAAACTTCG+AGG - Chr2:48369195-48369214 MsG0280009230.01.T01:CDS 35.0%
GATTCTGGTAAGTCATAACA+CGG + Chr2:48370971-48370990 None:intergenic 35.0%
GCATACAATCAGGAAAACTA+GGG + Chr2:48369647-48369666 None:intergenic 35.0%
GCTACATTTAGCATACAATC+AGG + Chr2:48369657-48369676 None:intergenic 35.0%
GCTGATCTTCTTAAGTTCAT+TGG - Chr2:48370315-48370334 MsG0280009230.01.T01:intron 35.0%
GTAAAGGTCCCAAATATTTG+TGG - Chr2:48369528-48369547 MsG0280009230.01.T01:intron 35.0%
GTCTATGTTGATGTAGATGT+TGG - Chr2:48370056-48370075 MsG0280009230.01.T01:intron 35.0%
GTTGCAATATAGGTTTCTTG+AGG - Chr2:48372109-48372128 MsG0280009230.01.T01:intron 35.0%
TAACAACTAGGAATATGGGA+TGG + Chr2:48371628-48371647 None:intergenic 35.0%
TAAGAGAGATTCACAAATGG+CGG + Chr2:48371191-48371210 None:intergenic 35.0%
TAATAGGAATTAAGGTGAGG+TGG - Chr2:48368820-48368839 MsG0280009230.01.T01:intron 35.0%
TATGTTATTCTATGGCTTCC+AGG - Chr2:48371901-48371920 MsG0280009230.01.T01:intron 35.0%
TCAAAGGATGTGATAGAAGT+AGG + Chr2:48370102-48370121 None:intergenic 35.0%
TCAAATGCATACTCTTTCAC+AGG + Chr2:48372312-48372331 None:intergenic 35.0%
TCATTACTCAGAATTCCAGA+AGG + Chr2:48367146-48367165 None:intergenic 35.0%
TCCAAAAGTTCCAATACCTT+TGG + Chr2:48369250-48369269 None:intergenic 35.0%
TCCTCAACCTGTAATTAAAC+AGG + Chr2:48370005-48370024 None:intergenic 35.0%
TCCTGTTTAATTACAGGTTG+AGG - Chr2:48370001-48370020 MsG0280009230.01.T01:intron 35.0%
TGAACTTAAGAAGATCAGCA+TGG + Chr2:48370314-48370333 None:intergenic 35.0%
TTAGCCAGGCTCATAAAATT+AGG + Chr2:48369706-48369725 None:intergenic 35.0%
TTCCAAACCAAAACCAATCA+TGG - Chr2:48366863-48366882 MsG0280009230.01.T01:CDS 35.0%
! AAAGGCTTGGATCTGAAATT+TGG - Chr2:48370793-48370812 MsG0280009230.01.T01:intron 35.0%
! AAATAAAACTGAGTTGGGTC+AGG + Chr2:48371345-48371364 None:intergenic 35.0%
! AATAAGGGCTTGTTTGCATT+AGG + Chr2:48367579-48367598 None:intergenic 35.0%
! ACAAACCTTCTTTGTTTGTG+TGG + Chr2:48369778-48369797 None:intergenic 35.0%
! ACCACACTCTTTAAAAAGGA+AGG + Chr2:48370591-48370610 None:intergenic 35.0%
! AGAAGCTACGAAATTAGCTT+AGG + Chr2:48367734-48367753 None:intergenic 35.0%
! ATCATTCACAAACTTTGGGA+AGG - Chr2:48368328-48368347 MsG0280009230.01.T01:intron 35.0%
! ATTATAACTTCTGGTGTTGG+AGG - Chr2:48369113-48369132 MsG0280009230.01.T01:CDS 35.0%
! CACGACAATTTAGAATTGAG+TGG + Chr2:48369867-48369886 None:intergenic 35.0%
! CATTATCATCTGGATTTTGC+AGG - Chr2:48372437-48372456 MsG0280009230.01.T01:CDS 35.0%
! CTTACCTAATTTTATGAGCC+TGG - Chr2:48369699-48369718 MsG0280009230.01.T01:intron 35.0%
! TCATTCACAAACTTTGGGAA+GGG - Chr2:48368329-48368348 MsG0280009230.01.T01:intron 35.0%
! TCTTGTAACTGTCGTTGATT+TGG + Chr2:48366926-48366945 None:intergenic 35.0%
! TGCTTATATTGTAATGGGGA+AGG - Chr2:48372149-48372168 MsG0280009230.01.T01:intron 35.0%
! TTTCTCCTTTTCTGCTTTGT+AGG - Chr2:48371766-48371785 MsG0280009230.01.T01:intron 35.0%
!! AATGAGTCTTTTTCGTCTCT+AGG - Chr2:48367161-48367180 MsG0280009230.01.T01:intron 35.0%
!! ACCTTCCTTTTTAAAGAGTG+TGG - Chr2:48370587-48370606 MsG0280009230.01.T01:intron 35.0%
!! ATCCTTTTGTATTCTGAAGG+TGG + Chr2:48368443-48368462 None:intergenic 35.0%
!! ATGAGTCTTTTTCGTCTCTA+GGG - Chr2:48367162-48367181 MsG0280009230.01.T01:intron 35.0%
!! CTTTTTAAAGAGTGTGGTGT+GGG - Chr2:48370593-48370612 MsG0280009230.01.T01:intron 35.0%
!! GGTTTTGTAGACAAATTACG+GGG - Chr2:48368595-48368614 MsG0280009230.01.T01:intron 35.0%
!! TGCATTTTTAATTCCAGCTG+TGG - Chr2:48368065-48368084 MsG0280009230.01.T01:intron 35.0%
!! TTTTAATTGGCACTTGAGGA+AGG + Chr2:48372379-48372398 None:intergenic 35.0%
!! TTTTTAAAGAGTGTGGTGTG+GGG - Chr2:48370594-48370613 MsG0280009230.01.T01:intron 35.0%
!!! AACTACGGTTTTTTGCTGAA+GGG - Chr2:48371303-48371322 MsG0280009230.01.T01:CDS 35.0%
!!! ACTGTCGTTGATTTGGTTTT+CGG + Chr2:48366919-48366938 None:intergenic 35.0%
!!! GATTGGTTTTGGTTTGGAAT+TGG + Chr2:48366862-48366881 None:intergenic 35.0%
!!! TCCAAAGGTATTGGAACTTT+TGG - Chr2:48369246-48369265 MsG0280009230.01.T01:CDS 35.0%
AAAAAACCCTGAGTGTGGAA+AGG - Chr2:48371113-48371132 MsG0280009230.01.T01:CDS 40.0%
AAGTGATTCTCTGGTTGTCA+GGG - Chr2:48369054-48369073 MsG0280009230.01.T01:CDS 40.0%
ACATCCTTTCCCATCAATAG+TGG + Chr2:48368009-48368028 None:intergenic 40.0%
ACTAGATACCCCAATCAGTT+TGG + Chr2:48370740-48370759 None:intergenic 40.0%
ACTCTATAGCATTGTTGCCT+GGG - Chr2:48370674-48370693 MsG0280009230.01.T01:intron 40.0%
ACTCTATGTTTGTGAGGATG+GGG - Chr2:48371378-48371397 MsG0280009230.01.T01:CDS 40.0%
ACTGTTGAAGGATTGGAACA+GGG - Chr2:48370177-48370196 MsG0280009230.01.T01:intron 40.0%
AGCATGTGTGTATACCTGAA+TGG + Chr2:48368166-48368185 None:intergenic 40.0%
AGGATGTGATAGAAGTAGGT+AGG + Chr2:48370098-48370117 None:intergenic 40.0%
AGTCGCGGAATAAGTCAATA+AGG + Chr2:48368263-48368282 None:intergenic 40.0%
ATAACACCAGTTCCATTACG+AGG + Chr2:48368117-48368136 None:intergenic 40.0%
ATTGGAATCAAACTTCGAGG+AGG - Chr2:48369198-48369217 MsG0280009230.01.T01:CDS 40.0%
CAAAAAACCGTAGTTGTGCT+GGG + Chr2:48371298-48371317 None:intergenic 40.0%
GAAATCCGGTGGTAAATGTT+AGG - Chr2:48370711-48370730 MsG0280009230.01.T01:intron 40.0%
GACCACCTTCAGAATACAAA+AGG - Chr2:48368438-48368457 MsG0280009230.01.T01:intron 40.0%
GCAATTTCTTCGCTACTTGA+AGG - Chr2:48372006-48372025 MsG0280009230.01.T01:intron 40.0%
GTGCAATTTACACCTCGTAA+TGG - Chr2:48368102-48368121 MsG0280009230.01.T01:intron 40.0%
GTTATCTCAACGTACTTCTC+AGG - Chr2:48367184-48367203 MsG0280009230.01.T01:intron 40.0%
GTTGTACCTGTAAATCAAGG+CGG + Chr2:48372572-48372591 None:intergenic 40.0%
TAAGTCATAACACGGACCAA+GGG + Chr2:48370963-48370982 None:intergenic 40.0%
TACTCTATAGCATTGTTGCC+TGG - Chr2:48370673-48370692 MsG0280009230.01.T01:intron 40.0%
TCATGATTGATGAAGCAGAC+AGG - Chr2:48369173-48369192 MsG0280009230.01.T01:CDS 40.0%
TCTACATCAACATAGACAGG+AGG + Chr2:48370053-48370072 None:intergenic 40.0%
TCTTAGAGCCAGTTTGGATT+AGG - Chr2:48367368-48367387 MsG0280009230.01.T01:intron 40.0%
TCTTGGATCAATCAGAACTC+TGG - Chr2:48370871-48370890 MsG0280009230.01.T01:intron 40.0%
TGAAGGGGAAAAGAAAGCTT+GGG - Chr2:48371319-48371338 MsG0280009230.01.T01:CDS 40.0%
TGAGAAGCAGATAATTAGCC+AGG + Chr2:48369720-48369739 None:intergenic 40.0%
TGATGAAGCAGACAGGATAT+TGG - Chr2:48369180-48369199 MsG0280009230.01.T01:CDS 40.0%
TGCTTAATTTCAGGCAGCAA+AGG - Chr2:48372284-48372303 MsG0280009230.01.T01:CDS 40.0%
TGTAGATGTTGGGAGAGAAA+AGG - Chr2:48370067-48370086 MsG0280009230.01.T01:intron 40.0%
TTCAGCCACACAAACAAAGA+AGG - Chr2:48369770-48369789 MsG0280009230.01.T01:intron 40.0%
TTCATATCCAACAGTAACCC+AGG + Chr2:48370694-48370713 None:intergenic 40.0%
TTGATGGGAAAGGATGTTCT+TGG - Chr2:48368012-48368031 MsG0280009230.01.T01:intron 40.0%
TTGTACAACAATTCCACAGC+TGG + Chr2:48368081-48368100 None:intergenic 40.0%
! CAAACTTTGGGAAGGGTTAT+TGG - Chr2:48368336-48368355 MsG0280009230.01.T01:intron 40.0%
! CCACACCACACTCTTTAAAA+AGG + Chr2:48370595-48370614 None:intergenic 40.0%
! CTGGATTTTGCAGGAGAAAA+TGG - Chr2:48372446-48372465 MsG0280009230.01.T01:CDS 40.0%
! GAGTTTTACCCATATGACTC+AGG - Chr2:48367220-48367239 MsG0280009230.01.T01:intron 40.0%
! GATTTTGCAGGAGAAAATGG+TGG - Chr2:48372449-48372468 MsG0280009230.01.T01:CDS 40.0%
! GTTGAGAATGTTTTGCCTTC+TGG - Chr2:48367128-48367147 MsG0280009230.01.T01:CDS 40.0%
! GTTGCAACTTTCACTAGTCT+TGG - Chr2:48370854-48370873 MsG0280009230.01.T01:intron 40.0%
! TTTACACCTCGTAATGGAAC+TGG - Chr2:48368108-48368127 MsG0280009230.01.T01:intron 40.0%
!! CAAGGATTTGCTTTAAGGGA+AGG + Chr2:48369827-48369846 None:intergenic 40.0%
!! CATTTAAAGGTTTGGTGCCA+AGG - Chr2:48369564-48369583 MsG0280009230.01.T01:intron 40.0%
!! CCTTTTTAAAGAGTGTGGTG+TGG - Chr2:48370592-48370611 MsG0280009230.01.T01:intron 40.0%
!! TATTGACTTATTCCGCGACT+TGG - Chr2:48368263-48368282 MsG0280009230.01.T01:intron 40.0%
!! TTTTAAAGAGTGTGGTGTGG+GGG - Chr2:48370595-48370614 MsG0280009230.01.T01:intron 40.0%
!!! ACTACGGTTTTTTGCTGAAG+GGG - Chr2:48371304-48371323 MsG0280009230.01.T01:CDS 40.0%
!!! AGGCTGTATTTTTTGTCCCT+TGG - Chr2:48372169-48372188 MsG0280009230.01.T01:intron 40.0%
!!! CAACTACGGTTTTTTGCTGA+AGG - Chr2:48371302-48371321 MsG0280009230.01.T01:CDS 40.0%
!!! CTGTCGTTGATTTGGTTTTC+GGG + Chr2:48366918-48366937 None:intergenic 40.0%
!!! GTGGTTTTAGAGCAAGTGAT+GGG - Chr2:48368839-48368858 MsG0280009230.01.T01:intron 40.0%
!!! TGGTTTTAGAGCAAGTGATG+GGG - Chr2:48368840-48368859 MsG0280009230.01.T01:intron 40.0%
AACAACAAAACGCTTGGCAC+AGG + Chr2:48370217-48370236 None:intergenic 45.0%
AACTAGAGAGCTTGCCATTC+AGG - Chr2:48368149-48368168 MsG0280009230.01.T01:intron 45.0%
AAGACCCTTATCGAGGGAAA+CGG + Chr2:48368919-48368938 None:intergenic 45.0%
AATCTGAGCTCTTGCACGAT+TGG - Chr2:48369142-48369161 MsG0280009230.01.T01:CDS 45.0%
ACAACAAAACGCTTGGCACA+GGG + Chr2:48370216-48370235 None:intergenic 45.0%
ACTCACGATTTCACCCACAA+CGG + Chr2:48371005-48371024 None:intergenic 45.0%
AGGTGTCTGAAAAGACAAGC+GGG + Chr2:48370033-48370052 None:intergenic 45.0%
ATTGTTGCCTGGGTTACTGT+TGG - Chr2:48370684-48370703 MsG0280009230.01.T01:intron 45.0%
CACTGTTGAAGGATTGGAAC+AGG - Chr2:48370176-48370195 MsG0280009230.01.T01:intron 45.0%
CCAGTCCTACAAAGCAGAAA+AGG + Chr2:48371774-48371793 None:intergenic 45.0%
CCTCAACTGAACTCTCCTAA+AGG + Chr2:48371258-48371277 None:intergenic 45.0%
CTCTATGTTTGTGAGGATGG+GGG - Chr2:48371379-48371398 MsG0280009230.01.T01:CDS 45.0%
CTGAAGGGGAAAAGAAAGCT+TGG - Chr2:48371318-48371337 MsG0280009230.01.T01:CDS 45.0%
CTGTTGGATATGAAATCCGG+TGG - Chr2:48370700-48370719 MsG0280009230.01.T01:intron 45.0%
GAAGCTGAGCGCATTGTTAA+AGG - Chr2:48368378-48368397 MsG0280009230.01.T01:intron 45.0%
GAAGTGATTCTCTGGTTGTC+AGG - Chr2:48369053-48369072 MsG0280009230.01.T01:CDS 45.0%
GAGCTGTTCTACCAACTCTA+TGG + Chr2:48371934-48371953 None:intergenic 45.0%
GATGGGGGAATAGAGTTGTA+TGG - Chr2:48371394-48371413 MsG0280009230.01.T01:CDS 45.0%
GCAAAAAACCGTAGTTGTGC+TGG + Chr2:48371299-48371318 None:intergenic 45.0%
GGAACAGAGAAGTGATTCTC+TGG - Chr2:48369045-48369064 MsG0280009230.01.T01:CDS 45.0%
GTAAGTCATAACACGGACCA+AGG + Chr2:48370964-48370983 None:intergenic 45.0%
GTCACTTGAACTGTCAGTGT+CGG + Chr2:48368530-48368549 None:intergenic 45.0%
GTGCTTCTCTTCTAGTAGGT+AGG - Chr2:48369481-48369500 MsG0280009230.01.T01:intron 45.0%
GTGTCTGAAAAACCAAGTCG+CGG + Chr2:48368278-48368297 None:intergenic 45.0%
TAATTGGCACTTGAGGAAGG+AGG + Chr2:48372376-48372395 None:intergenic 45.0%
TCCTTTCCCATCAATAGTGG+CGG + Chr2:48368006-48368025 None:intergenic 45.0%
TGAATGGCAAGCTCTCTAGT+TGG + Chr2:48368150-48368169 None:intergenic 45.0%
TGAGATGTGGTTGTCGTTGT+CGG + Chr2:48366895-48366914 None:intergenic 45.0%
TGATCCACCTGATGAACCAA+AGG - Chr2:48371805-48371824 MsG0280009230.01.T01:intron 45.0%
TGTTCACCGCCTTGATTTAC+AGG - Chr2:48372563-48372582 MsG0280009230.01.T01:CDS 45.0%
TTAGGAGAGTTCAGTTGAGG+TGG - Chr2:48371258-48371277 MsG0280009230.01.T01:intron 45.0%
TTTGAACACTCTGGCCAAAG+AGG - Chr2:48372485-48372504 MsG0280009230.01.T01:CDS 45.0%
! AATCTGTTGATTGCAACGCC+TGG - Chr2:48368405-48368424 MsG0280009230.01.T01:intron 45.0%
! ACTTTGGGAAGGGTTATTGG+TGG - Chr2:48368339-48368358 MsG0280009230.01.T01:intron 45.0%
! CCTTTAGGAGAGTTCAGTTG+AGG - Chr2:48371255-48371274 MsG0280009230.01.T01:intron 45.0%
! CCTTTTCTGCTTTGTAGGAC+TGG - Chr2:48371771-48371790 MsG0280009230.01.T01:intron 45.0%
! GAGGTGTCTGAAAAGACAAG+CGG + Chr2:48370034-48370053 None:intergenic 45.0%
! GTTAGGGTGCCAAACTGATT+GGG - Chr2:48370728-48370747 MsG0280009230.01.T01:intron 45.0%
! TGTTAGGGTGCCAAACTGAT+TGG - Chr2:48370727-48370746 MsG0280009230.01.T01:intron 45.0%
! TTAGGGTGCCAAACTGATTG+GGG - Chr2:48370729-48370748 MsG0280009230.01.T01:intron 45.0%
!! AGAAGCACCTTTGGTTCATC+AGG + Chr2:48371815-48371834 None:intergenic 45.0%
!! ATTGGTGGTGTGGGTAGAAA+GGG - Chr2:48368354-48368373 MsG0280009230.01.T01:intron 45.0%
!! TATTGGTGGTGTGGGTAGAA+AGG - Chr2:48368353-48368372 MsG0280009230.01.T01:intron 45.0%
!!! GATTCGGCCATGATTGGTTT+TGG + Chr2:48366873-48366892 None:intergenic 45.0%
!!! GGCCATGATTGGTTTTGGTT+TGG + Chr2:48366868-48366887 None:intergenic 45.0%
!!! GGTGGTTTTAGAGCAAGTGA+TGG - Chr2:48368838-48368857 MsG0280009230.01.T01:intron 45.0%
!!! GGTTTGGTGCCAAGGTTTTT+AGG - Chr2:48369572-48369591 MsG0280009230.01.T01:intron 45.0%
!!! GGTTTTAGAGCAAGTGATGG+GGG - Chr2:48368841-48368860 MsG0280009230.01.T01:intron 45.0%
!!! TTTGGTTTTCGGGTGAGATG+TGG + Chr2:48366908-48366927 None:intergenic 45.0%
AGAAGCCGTTTCCCTCGATA+AGG - Chr2:48368911-48368930 MsG0280009230.01.T01:intron 50.0%
AGCGATTCCGCCACTATTGA+TGG - Chr2:48367996-48368015 MsG0280009230.01.T01:intron 50.0%
CTCTGGCCAAAGAGGCTTAT+AGG - Chr2:48372493-48372512 MsG0280009230.01.T01:CDS 50.0%
GAAGCCGTTTCCCTCGATAA+GGG - Chr2:48368912-48368931 MsG0280009230.01.T01:intron 50.0%
GCAGGTCACTGTTGAAGGAT+TGG - Chr2:48370170-48370189 MsG0280009230.01.T01:intron 50.0%
GCGATTCCGCCACTATTGAT+GGG - Chr2:48367997-48368016 MsG0280009230.01.T01:intron 50.0%
GGCACCCTAACATTTACCAC+CGG + Chr2:48370719-48370738 None:intergenic 50.0%
GTGGCGAGTGAGCTAATGAA+AGG - Chr2:48368303-48368322 MsG0280009230.01.T01:intron 50.0%
GTGGTTGTCGTTGTCGGATT+CGG + Chr2:48366889-48366908 None:intergenic 50.0%
TCACAAATGGCGGTGCAAAG+AGG + Chr2:48371181-48371200 None:intergenic 50.0%
TCCGCCACTATTGATGGGAA+AGG - Chr2:48368002-48368021 MsG0280009230.01.T01:intron 50.0%
TCGATGCAGGTCACTGTTGA+AGG - Chr2:48370165-48370184 MsG0280009230.01.T01:intron 50.0%
TGAAATCGTGAGTTGCCGGT+GGG - Chr2:48371012-48371031 MsG0280009230.01.T01:CDS 50.0%
TGGACTTGACATACCTGCTG+TGG - Chr2:48370452-48370471 MsG0280009230.01.T01:intron 50.0%
TGGGTGAAATCGTGAGTTGC+CGG - Chr2:48371008-48371027 MsG0280009230.01.T01:CDS 50.0%
TGGTGAAGCAATGAAGCTGC+TGG + Chr2:48366842-48366861 None:intergenic 50.0%
TTGTCGGATTCGGCCATGAT+TGG + Chr2:48366879-48366898 None:intergenic 50.0%
! AACAGTGACCTGCATCGATG+CGG + Chr2:48370163-48370182 None:intergenic 50.0%
! AATACGTTCCGCATCGATGC+AGG - Chr2:48370152-48370171 MsG0280009230.01.T01:intron 50.0%
! AGAGCAAGTGATGGGGGATA+TGG - Chr2:48368847-48368866 MsG0280009230.01.T01:intron 50.0%
! AGCACCTTTGGTTCATCAGG+TGG + Chr2:48371812-48371831 None:intergenic 50.0%
! GAGCAAGTGATGGGGGATAT+GGG - Chr2:48368848-48368867 MsG0280009230.01.T01:intron 50.0%
! TGTACTGATGTTGCTGCTCG+TGG - Chr2:48370432-48370451 MsG0280009230.01.T01:intron 50.0%
!! AGAGTTGGTAGAACAGCTCG+TGG - Chr2:48371935-48371954 MsG0280009230.01.T01:intron 50.0%
!! AGTTGGTAGAACAGCTCGTG+GGG - Chr2:48371937-48371956 MsG0280009230.01.T01:intron 50.0%
!! GAGTTGGTAGAACAGCTCGT+GGG - Chr2:48371936-48371955 MsG0280009230.01.T01:intron 50.0%
!! GGAAGGGTTATTGGTGGTGT+GGG - Chr2:48368345-48368364 MsG0280009230.01.T01:intron 50.0%
!! GGTGCCAAGGTTTTTAGGCT+GGG - Chr2:48369577-48369596 MsG0280009230.01.T01:intron 50.0%
!! GGTTTTTCAGACACACGCTG+TGG - Chr2:48368284-48368303 MsG0280009230.01.T01:intron 50.0%
!! GTGCCAAGGTTTTTAGGCTG+GGG - Chr2:48369578-48369597 MsG0280009230.01.T01:intron 50.0%
!! TGGGTGGAAAGGTGTCGAAA+TGG - Chr2:48371041-48371060 MsG0280009230.01.T01:CDS 50.0%
!! TGGTGCCAAGGTTTTTAGGC+TGG - Chr2:48369576-48369595 MsG0280009230.01.T01:intron 50.0%
ACGGCACACTTCAGCGATTC+TGG + Chr2:48370986-48371005 None:intergenic 55.0%
AGGTGGTCAAGAAGACGACC+AGG + Chr2:48368426-48368445 None:intergenic 55.0%
ATAACACGGACCAAGGGCCT+TGG + Chr2:48370957-48370976 None:intergenic 55.0%
CAGCCCCAGCCTAAAAACCT+TGG + Chr2:48369584-48369603 None:intergenic 55.0%
CCTCTCACCCAGCACAACTA+CGG - Chr2:48371288-48371307 MsG0280009230.01.T01:intron 55.0%
CGTAGTTGTGCTGGGTGAGA+GGG + Chr2:48371290-48371309 None:intergenic 55.0%
GATTGTGTGAGCTGCGTCGT+AGG - Chr2:48370910-48370929 MsG0280009230.01.T01:intron 55.0%
GTGAAATCGTGAGTTGCCGG+TGG - Chr2:48371011-48371030 MsG0280009230.01.T01:CDS 55.0%
TAACACGGACCAAGGGCCTT+GGG + Chr2:48370956-48370975 None:intergenic 55.0%
TGCAATCCCTATGCCTCCCA+AGG - Chr2:48370937-48370956 MsG0280009230.01.T01:intron 55.0%
! ATCGCTGAAGTGTGCCGTTG+TGG - Chr2:48370988-48371007 MsG0280009230.01.T01:CDS 55.0%
! CAAGTGATGGGGGATATGGG+AGG - Chr2:48368851-48368870 MsG0280009230.01.T01:intron 55.0%
! TCGCTGAAGTGTGCCGTTGT+GGG - Chr2:48370989-48371008 MsG0280009230.01.T01:CDS 55.0%
!! AGGATGTTCTTGGTGCTGCG+AGG - Chr2:48368022-48368041 MsG0280009230.01.T01:intron 55.0%
!! GGGAAGGGTTATTGGTGGTG+TGG - Chr2:48368344-48368363 MsG0280009230.01.T01:intron 55.0%
!! TGTTCTTGGTGCTGCGAGGA+CGG - Chr2:48368026-48368045 MsG0280009230.01.T01:intron 55.0%
AAAGAGGAGCTGCGAGCGCA+AGG + Chr2:48371165-48371184 None:intergenic 60.0%
AGAACAGCTCGTGGGGAAGG+TGG - Chr2:48371944-48371963 MsG0280009230.01.T01:intron 60.0%
AGTTGCCGGTGGGAACGTGT+GGG - Chr2:48371022-48371041 MsG0280009230.01.T01:CDS 60.0%
CAAGGAGGAGTTGTGGTCGC+AGG + Chr2:48371147-48371166 None:intergenic 60.0%
CCGTAGTTGTGCTGGGTGAG+AGG + Chr2:48371291-48371310 None:intergenic 60.0%
GCTCGTGGGGAAGGTGGAAA+AGG - Chr2:48371950-48371969 MsG0280009230.01.T01:intron 60.0%
GGTAGAACAGCTCGTGGGGA+AGG - Chr2:48371941-48371960 MsG0280009230.01.T01:intron 60.0%
GTGGCGCCTTTCCACACTCA+GGG + Chr2:48371122-48371141 None:intergenic 60.0%
GTGGGAACGTGTGGGTGGAA+AGG - Chr2:48371030-48371049 MsG0280009230.01.T01:CDS 60.0%
TGTGCTGGGTGAGAGGGATG+CGG + Chr2:48371284-48371303 None:intergenic 60.0%
TTCCACCCACACGTTCCCAC+CGG + Chr2:48371030-48371049 None:intergenic 60.0%
! CAAGGGCCTTGGGAGGCATA+GGG + Chr2:48370946-48370965 None:intergenic 60.0%
!! GTTCTTGGTGCTGCGAGGAC+GGG - Chr2:48368027-48368046 MsG0280009230.01.T01:intron 60.0%
CCTATGCCTCCCAAGGCCCT+TGG - Chr2:48370944-48370963 MsG0280009230.01.T01:intron 65.0%
GAGTTGCCGGTGGGAACGTG+TGG - Chr2:48371021-48371040 MsG0280009230.01.T01:CDS 65.0%
GCGAGCGCAAGGAGGAGTTG+TGG + Chr2:48371154-48371173 None:intergenic 65.0%
GGAGGAGTTGTGGTCGCAGG+CGG + Chr2:48371144-48371163 None:intergenic 65.0%
GGTGGCGCCTTTCCACACTC+AGG + Chr2:48371123-48371142 None:intergenic 65.0%
! CCAAGGGCCTTGGGAGGCAT+AGG + Chr2:48370947-48370966 None:intergenic 65.0%
CACGGACCAAGGGCCTTGGG+AGG + Chr2:48370953-48370972 None:intergenic 70.0%
GAGGAGCTGCGAGCGCAAGG+AGG + Chr2:48371162-48371181 None:intergenic 70.0%
GGAGTTGTGGTCGCAGGCGG+TGG + Chr2:48371141-48371160 None:intergenic 70.0%
TGCCGGTGGGAACGTGTGGG+TGG - Chr2:48371025-48371044 MsG0280009230.01.T01:CDS 70.0%
! GGTGCTGCGAGGACGGGTTC+TGG - Chr2:48368033-48368052 MsG0280009230.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 48366832 48372632 48366832 ID=MsG0280009230.01;Name=MsG0280009230.01
Chr2 mRNA 48366832 48372632 48366832 ID=MsG0280009230.01.T01;Parent=MsG0280009230.01;Name=MsG0280009230.01.T01;_AED=0.38;_eAED=0.38;_QI=50|0.9|0.81|1|0.8|0.81|11|0|548
Chr2 exon 48366832 48367005 48366832 ID=MsG0280009230.01.T01:exon:20474;Parent=MsG0280009230.01.T01
Chr2 exon 48367099 48367167 48367099 ID=MsG0280009230.01.T01:exon:20473;Parent=MsG0280009230.01.T01
Chr2 exon 48367437 48367541 48367437 ID=MsG0280009230.01.T01:exon:20472;Parent=MsG0280009230.01.T01
Chr2 exon 48367638 48367676 48367638 ID=MsG0280009230.01.T01:exon:20471;Parent=MsG0280009230.01.T01
Chr2 exon 48368991 48369290 48368991 ID=MsG0280009230.01.T01:exon:20470;Parent=MsG0280009230.01.T01
Chr2 exon 48369376 48369447 48369376 ID=MsG0280009230.01.T01:exon:20469;Parent=MsG0280009230.01.T01
Chr2 exon 48369673 48369714 48369673 ID=MsG0280009230.01.T01:exon:20468;Parent=MsG0280009230.01.T01
Chr2 exon 48370185 48370295 48370185 ID=MsG0280009230.01.T01:exon:20467;Parent=MsG0280009230.01.T01
Chr2 exon 48370982 48371170 48370982 ID=MsG0280009230.01.T01:exon:20466;Parent=MsG0280009230.01.T01
Chr2 exon 48371294 48371479 48371294 ID=MsG0280009230.01.T01:exon:20465;Parent=MsG0280009230.01.T01
Chr2 exon 48372223 48372632 48372223 ID=MsG0280009230.01.T01:exon:20464;Parent=MsG0280009230.01.T01
Chr2 five_prime_UTR 48372583 48372632 48372583 ID=MsG0280009230.01.T01:five_prime_utr;Parent=MsG0280009230.01.T01
Chr2 CDS 48372223 48372582 48372223 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48371294 48371479 48371294 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48370982 48371170 48370982 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48370185 48370295 48370185 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48369673 48369714 48369673 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48369376 48369447 48369376 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48368991 48369290 48368991 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48367638 48367676 48367638 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48367437 48367541 48367437 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48367099 48367167 48367099 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Chr2 CDS 48366832 48367005 48366832 ID=MsG0280009230.01.T01:cds;Parent=MsG0280009230.01.T01
Gene Sequence

>MsG0280009230.01.T01

ATGGCCGAATCCGACAACGACAACCACATCTCACCCGAAAACCAAATCAACGACAGTTACAAGAAGAAGAATAAGAAGCTTCGCAACAGAAAAAGATCTCGTAAATTGGAAAAAGAACTTGAAAAACAACAACAACAAGAGGAGAAGAATAATGAAAACACAGAATCTGAAGCTGAAGAAGATGAAGAAGAGAAGAATGATAAAGATGGCGACGACGACGACGTCGAAGAAATAGAAGAGAAGAAAGTTGAGAATGTTTTGCCTTCTGGAATTCTGAGTAATGAGTCTTTTTCGTCTCTAGGGTTATCTCAACGTACTTCTCAGGCTATTGCTGCAATGAGTTTTACCCATATGACTCAGATTCAAGCGAAAGCGATTCCGCCACTATTGATGGGAAAGGATGTTCTTGGTGCTGCGAGGACGGGTTCTGGTAAAACACTTGCATTTTTAATTCCAGCTGTGGAATTGTTGTACAATGTGCAATTTACACCTCGTAATGGAACTGGTGTTATTGTCATTTGTCCAACTAGAGAGCTTGCCATTCAGACACACGCTGTGGCGAGTGAGCTAATGAAAGGTTATCATTCACAAACTTTGGGAAGGGTTATTGGTGGTGTGGGTAGAAAGGGAGAAGCTGAGCGCATTGTTAAAGGAGTAAATCTGTTGATTGCAACGCCTGGTCGTCTTCTTGACCACCTTCAGAATACAAAAGGATTCATATATAAAAACTTGAAGTGTCTCATGATTGATGAAGCAGACAGGATATTGGAATCAAACTTCGAGGAGGAAATGAAGCAGATCCTTAATATACTTCCAAAGGTATTGGAACTTTTGGAGTTTAATTTAAAAAGGCAAACAGCTTTGTTTTCAGCCACACAAACAAAGAAGGTTGAGGATCTTGCCCGCTTGTCTTTTCAGACACCTCCTGTCTATGTTGATGTAGATGTTGGGAGAGAAAAGGTCACTGTTGAAGGATTGGAACAGGGTTATGTTGTTGTTCCCTGTGCCAAGCGTTTTGTTGTTCTGTATTCATTCTTGAAGAGATACCAATCAAAAAAAGTGATGGTGTTTTTCTCTTCATGCAACTCTGTCAAATTCCATGCTGATCTTCTTAAGTTCATTGGATTAGACTGTTTAAATATTCATGGAAAACAAAAGCAGAATTCTCGGACAAGTACCTTTTTCAACTTTTGCAAAGCTGAAAAAGGGATATTGCTCTGTACTGATGTTGCTGCTCGTGGACTTGACATACCTGCTGTGGACTGGATTGTGCAGTTTGATCCACCTGATGAACCAAAGGAATATATCCATAGAGTTGGTAGAACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTACTTTTCCTAATTCCTGAAGAATTGCAATTTCTTCGCTACTTGAAGGCAGCAAAGGTTCCTGTGAAAGAGTATGCATTTGATGATAAAAAGCTTTCAAATGTACAATCTCAACTGGAGAAAATGGTGGCCAGCGTTTATCATTTGAACACTCTGGCCAAAGAGGCTTATAGGTCATATATATTGGCATATAATGCACATTCTATGAAGGAAATATTCAATGTTCACCGCCTTGATTTACAGGTACAACTTTCTCATCACATTTTACATAACGGTTTTCAAATTTCCTGA

Protein sequence

>MsG0280009230.01.T01

MAESDNDNHISPENQINDSYKKKNKKLRNRKRSRKLEKELEKQQQQEEKNNENTESEAEEDEEEKNDKDGDDDDVEEIEEKKVENVLPSGILSNESFSSLGLSQRTSQAIAAMSFTHMTQIQAKAIPPLLMGKDVLGAARTGSGKTLAFLIPAVELLYNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGRVIGGVGRKGEAERIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPKVLELLEFNLKRQTALFSATQTKKVEDLARLSFQTPPVYVDVDVGREKVTVEGLEQGYVVVPCAKRFVVLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAFDDKKLSNVQSQLEKMVASVYHLNTLAKEAYRSYILAYNAHSMKEIFNVHRLDLQVQLSHHILHNGFQIS*