AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042050.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042050.01.T01 MTR_8g010330 88.408 578 45 2 1 578 1 556 0.0 1047
MsG0880042050.01.T01 MTR_7g100040 70.257 622 127 6 1 578 2 609 0.0 872
MsG0880042050.01.T01 MTR_7g100040 67.811 466 106 5 157 578 22 487 0.0 632
MsG0880042050.01.T01 MTR_6g022610 68.889 180 14 2 151 330 1 138 4.39e-74 233
MsG0880042050.01.T01 MTR_6g022570 73.585 106 28 0 444 549 30 135 7.07e-48 164
MsG0880042050.01.T01 MTR_6g022610 80.435 92 14 1 220 311 1 88 1.41e-43 151
MsG0880042050.01.T01 MTR_6g022550 72.500 80 18 1 52 131 20 95 9.06e-30 115
MsG0880042050.01.T01 MTR_6g022550 58.163 98 19 1 448 545 87 162 9.67e-27 107
MsG0880042050.01.T01 MTR_6g022580 50.847 118 22 1 455 572 24 105 3.03e-24 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042050.01.T01 AT5G14520 56.230 610 208 6 1 574 1 587 0.0 659

Find 122 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCAATGTTTAAGGTTTA+AGG 0.120573 8:+3147539 None:intergenic
AAGCGGAAGAATTTCCTTTC+TGG 0.198772 8:+3143475 None:intergenic
CGAATAATCATGTCTATCTT+TGG 0.249220 8:+3145724 None:intergenic
ATCATGTCTATCTTTGGTTT+TGG 0.266241 8:+3145730 None:intergenic
AAGGAAATTCTTCCGCTTCC+TGG 0.293167 8:-3143470 MsG0880042050.01.T01:CDS
CAAGTGGAGTCCAAGCAAAA+AGG 0.303338 8:-3144679 MsG0880042050.01.T01:CDS
TCTTCATCACGAACCTTTGC+TGG 0.334518 8:-3145848 MsG0880042050.01.T01:CDS
TTTCTTGAGTGCTTGTGTCC+TGG 0.355340 8:+3146137 None:intergenic
TGAAAAGAGGTAGACTGATT+TGG 0.375506 8:+3146112 None:intergenic
ACCATTCGTTGTTGATTCTC+CGG 0.376534 8:+3143355 None:intergenic
TTTGCCGACAGAAAGTTATA+TGG 0.378288 8:-3143907 MsG0880042050.01.T01:CDS
ATATTAGGAAACTAAGCATT+TGG 0.388894 8:-3145951 MsG0880042050.01.T01:CDS
CCAAGGGCATCCACAAATCT+TGG 0.389508 8:+3145605 None:intergenic
ACCCCGACAGCCTAAGAAAA+AGG 0.389796 8:-3145917 MsG0880042050.01.T01:CDS
CCGTTTCATGGGAGGGAAAG+GGG 0.390364 8:-3144145 MsG0880042050.01.T01:CDS
TGTGGATGCCCTTGGAGAAT+TGG 0.395578 8:-3145597 MsG0880042050.01.T01:CDS
TGCACTGATGCACCCGGTTA+AGG 0.396358 8:-3144581 MsG0880042050.01.T01:CDS
TCACCTGCTAAGTCCTTAAC+CGG 0.396645 8:+3144568 None:intergenic
CAAAGATAGACATGATTATT+CGG 0.399051 8:-3145723 MsG0880042050.01.T01:CDS
CCTCTATCATTCTATAAACT+TGG 0.401850 8:-3144915 MsG0880042050.01.T01:CDS
TAGATAGAAACCTATGGCCT+TGG 0.403813 8:+3143982 None:intergenic
TGATCAGAGCATTACTCATC+AGG 0.410169 8:-3144105 MsG0880042050.01.T01:intron
AACTCCTCATCTACTACAAC+AGG 0.423042 8:-3145148 MsG0880042050.01.T01:CDS
TGTATGGTAGGGGAAGAAAA+AGG 0.429263 8:-3146184 MsG0880042050.01.T01:intron
TTGATAGTCTTTGCATAGTC+GGG 0.431043 8:+3143515 None:intergenic
CACCGTTTCATGGGAGGGAA+AGG 0.432749 8:-3144147 MsG0880042050.01.T01:CDS
ACCGTTTCATGGGAGGGAAA+GGG 0.435968 8:-3144146 MsG0880042050.01.T01:CDS
AATTGCTACAGCCTCTTCTT+CGG 0.436602 8:-3144952 MsG0880042050.01.T01:intron
CCAAGATTTGTGGATGCCCT+TGG 0.446091 8:-3145605 MsG0880042050.01.T01:CDS
ATTCTTCCGCTTCCTGGTGT+TGG 0.448314 8:-3143464 MsG0880042050.01.T01:CDS
CATTTGTGTAGATTGTTGAC+AGG 0.449441 8:-3144010 MsG0880042050.01.T01:intron
CTCTGATCAGATTCGTCAAA+AGG 0.450256 8:+3144119 None:intergenic
CGGTTGGAAGCTTTCGCAGC+AGG 0.453005 8:-3144869 MsG0880042050.01.T01:intron
CTTGCAAGCTGCTGCCAGAA+AGG 0.459351 8:-3143489 MsG0880042050.01.T01:CDS
CCCCTTTCCCTCCCATGAAA+CGG 0.462396 8:+3144145 None:intergenic
TCCAGAGGGTTTGCTCGCAT+TGG 0.462811 8:+3144738 None:intergenic
GTAGCCTGTTTGCAAGTTCG+TGG 0.464814 8:+3145764 None:intergenic
ATTAATAAAATTTACCGTCA+TGG 0.466461 8:+3143265 None:intergenic
GAAAGCTAACATCTTTCAAA+TGG 0.466679 8:+3145869 None:intergenic
TTTGTTAACTATGACGAAGA+AGG 0.480194 8:-3143545 MsG0880042050.01.T01:CDS
AAAACCACGAACTTGCAAAC+AGG 0.482442 8:-3145768 MsG0880042050.01.T01:CDS
TACAAATAATACCTGAAAAG+AGG 0.485388 8:+3146099 None:intergenic
TACTACTTCGATTCTTACAT+TGG 0.485533 8:-3145983 MsG0880042050.01.T01:CDS
TCTTCGTCATAGTTAACAAA+AGG 0.491004 8:+3143548 None:intergenic
ACGAACTTGCAAACAGGCTA+CGG 0.491947 8:-3145762 MsG0880042050.01.T01:CDS
GCCAATGCGAGCAAACCCTC+TGG 0.496559 8:-3144739 MsG0880042050.01.T01:CDS
AGATAGAAACCTATGGCCTT+GGG 0.498432 8:+3143983 None:intergenic
CAGGTTCATTAGAAAGAAGT+TGG 0.499834 8:+3144605 None:intergenic
AAAGAATTTAGATGAAGCTA+AGG 0.500721 8:-3143049 MsG0880042050.01.T01:CDS
CCAAGTTTATAGAATGATAG+AGG 0.510142 8:+3144915 None:intergenic
TCTAATTACTCAGGTACAAA+GGG 0.510871 8:-3144204 MsG0880042050.01.T01:intron
ATGCTGCAAAATTTGTCTCC+AGG 0.519038 8:-3146155 MsG0880042050.01.T01:CDS
TTCAATTTCATCAACAACAA+TGG 0.519696 8:-3147488 MsG0880042050.01.T01:exon
TGCAGAAAATTTAGCATGGT+AGG 0.520334 8:+3145102 None:intergenic
ATCCTCCCAGGCTTGATACT+CGG 0.520338 8:-3144889 MsG0880042050.01.T01:CDS
TAGACATGATTATTCGGCAG+AGG 0.521068 8:-3145717 MsG0880042050.01.T01:intron
GGTGGCACCGTTTCATGGGA+GGG 0.524004 8:-3144152 MsG0880042050.01.T01:CDS
GTCTAATTACTCAGGTACAA+AGG 0.527454 8:-3144205 MsG0880042050.01.T01:intron
ACAGGGATGCCCAAGGCCAT+AGG 0.528933 8:-3143992 MsG0880042050.01.T01:CDS
GAAACGGTGCCACCAAAAGC+AGG 0.530500 8:+3144161 None:intergenic
TTTGTGCAGGCTGAGGTTGA+GGG 0.531607 8:-3145189 MsG0880042050.01.T01:intron
CTTAGCAGGTGAAGATGAAG+AGG 0.534642 8:-3144557 MsG0880042050.01.T01:CDS
GTTCTATGTTCTTCCAGCAA+AGG 0.536261 8:+3145835 None:intergenic
TGGTGGCACCGTTTCATGGG+AGG 0.536528 8:-3144153 MsG0880042050.01.T01:CDS
CAACTTCTTTCTAATGAACC+TGG 0.539088 8:-3144604 MsG0880042050.01.T01:CDS
TTGCTAGATTGGCACATGAA+TGG 0.542766 8:-3145355 MsG0880042050.01.T01:intron
TGGAAAAGAAGATTCACCTC+AGG 0.542773 8:-3143444 MsG0880042050.01.T01:CDS
TTTGATAGTCTTTGCATAGT+CGG 0.544653 8:+3143514 None:intergenic
AAAACATTTGTATCTGTGAA+AGG 0.544677 8:-3145299 MsG0880042050.01.T01:CDS
GTTAGCTGAATCTAAACAAG+TGG 0.545674 8:-3144695 MsG0880042050.01.T01:CDS
ACCGGGTGCATCAGTGCACC+AGG 0.551844 8:+3144586 None:intergenic
CACCCGGTTAAGGACTTAGC+AGG 0.554532 8:-3144571 MsG0880042050.01.T01:CDS
GCCGACAGAAAGTTATATGG+TGG 0.557386 8:-3143904 MsG0880042050.01.T01:CDS
TAGATGAAGCTAAGGGTCAA+AGG 0.558194 8:-3143041 MsG0880042050.01.T01:CDS
ATTCTCTAGATAGAAACCTA+TGG 0.559229 8:+3143976 None:intergenic
TTCCAACCGAGTATCAAGCC+TGG 0.561392 8:+3144883 None:intergenic
CGTTTCATGGGAGGGAAAGG+GGG 0.566449 8:-3144144 MsG0880042050.01.T01:CDS
TTATAGGTATCCAAGATTTG+TGG 0.566941 8:-3145615 MsG0880042050.01.T01:intron
TCCCAGGCTTGATACTCGGT+TGG 0.569177 8:-3144885 MsG0880042050.01.T01:CDS
TCCAACCGAGTATCAAGCCT+GGG 0.572418 8:+3144884 None:intergenic
TAATAAGCGCAAGCAGAATG+AGG 0.573467 8:-3143094 MsG0880042050.01.T01:CDS
CGAACTTGCAAACAGGCTAC+GGG 0.574429 8:-3145761 MsG0880042050.01.T01:CDS
AAAGGTGACAAGTGAGGTGG+AGG 0.584834 8:+3143566 None:intergenic
CAGAAAGTTATATGGTGGGA+AGG 0.588140 8:-3143899 MsG0880042050.01.T01:intron
GACAGTCGTCCAATTCTCCA+AGG 0.592143 8:+3145588 None:intergenic
AAATTCACAAACCGAAGAAG+AGG 0.592721 8:+3144941 None:intergenic
GCTTCAAGTATCAGTCCAGA+GGG 0.593688 8:+3144724 None:intergenic
ACCGGAGAATCAACAACGAA+TGG 0.606554 8:-3143356 MsG0880042050.01.T01:CDS
GTTCATTAGAAAGAAGTTGG+TGG 0.606617 8:+3144608 None:intergenic
CCCACCATATAACTTTCTGT+CGG 0.607248 8:+3143903 None:intergenic
CCGACAGAAAGTTATATGGT+GGG 0.610921 8:-3143903 MsG0880042050.01.T01:CDS
TAAACTTGGAGTATCCTCCC+AGG 0.613538 8:-3144901 MsG0880042050.01.T01:CDS
TATCTCGTACTCACAAGTTG+AGG 0.614176 8:-3145322 MsG0880042050.01.T01:CDS
AGGAAACTAAGCATTTGGAA+AGG 0.618165 8:-3145946 MsG0880042050.01.T01:CDS
AGCTTCAAGTATCAGTCCAG+AGG 0.619437 8:+3144723 None:intergenic
GGAAAAGAAGATTCACCTCA+GGG 0.621811 8:-3143443 MsG0880042050.01.T01:CDS
AAGAATTTAGATGAAGCTAA+GGG 0.625241 8:-3143048 MsG0880042050.01.T01:CDS
TGTGAAAGGCATATACTACC+AGG 0.629120 8:-3145285 MsG0880042050.01.T01:intron
ACAACCTGTTGTAGTAGATG+AGG 0.633251 8:+3145144 None:intergenic
AAAAGAAACATCTGCCGGTG+TGG 0.634375 8:-3143384 MsG0880042050.01.T01:CDS
ATTTGTGTAGATTGTTGACA+GGG 0.635765 8:-3144009 MsG0880042050.01.T01:intron
TCTGCCGGTGTGGTACAGAC+CGG 0.638645 8:-3143374 MsG0880042050.01.T01:CDS
CACCTGCTAAGTCCTTAACC+GGG 0.639120 8:+3144569 None:intergenic
AAAAGGTCAAGGGAACTCAT+CGG 0.645163 8:-3145900 MsG0880042050.01.T01:CDS
ATTGTTGACAGGGATGCCCA+AGG 0.648595 8:-3143999 MsG0880042050.01.T01:CDS
GGTGAAACACTACAGAGCCC+CGG 0.652802 8:-3147467 MsG0880042050.01.T01:intron
AGAGTCATACAAAGCCATGA+CGG 0.656198 8:-3143279 MsG0880042050.01.T01:intron
ACCTGGTGCACTGATGCACC+CGG 0.657335 8:-3144587 MsG0880042050.01.T01:CDS
AGCTTGTACACAAATGCCGA+AGG 0.666012 8:-3145505 MsG0880042050.01.T01:intron
GAGAATATGTTCAACCACAG+TGG 0.666305 8:-3143959 MsG0880042050.01.T01:CDS
TTAACAAAAGGTGACAAGTG+AGG 0.666442 8:+3143560 None:intergenic
ACAGTCGTCCAATTCTCCAA+GGG 0.668238 8:+3145589 None:intergenic
ACAAAAGGTGACAAGTGAGG+TGG 0.668607 8:+3143563 None:intergenic
AAATTGCAGAAAATTTAGCA+TGG 0.670054 8:+3145098 None:intergenic
ATTGGACGACTGTCTTACAA+TGG 0.686764 8:-3145579 MsG0880042050.01.T01:CDS
AACCGAGTATCAAGCCTGGG+AGG 0.694808 8:+3144887 None:intergenic
AGTTTATAGAATGATAGAGG+CGG 0.695179 8:+3144918 None:intergenic
AGGCTGATCGTATCAAGCAG+CGG 0.699053 8:-3143074 MsG0880042050.01.T01:CDS
TTCTCCGGTCTGTACCACAC+CGG 0.702924 8:+3143370 None:intergenic
TTGAGGGTCAGACAATAACA+TGG 0.704070 8:-3145173 MsG0880042050.01.T01:CDS
ACACAATCAAATATCCACTG+TGG 0.749674 8:+3143945 None:intergenic
GTATATGTAATAGCACCCTG+AGG 0.783831 8:+3143428 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATTAAGAAGAT+AGG + Chr8:3145221-3145240 None:intergenic 10.0%
!! TTAATCCTTTAAATATATTT+GGG - Chr8:3143955-3143974 MsG0880042050.01.T01:CDS 10.0%
!! TTTAATCCTTTAAATATATT+TGG - Chr8:3143954-3143973 MsG0880042050.01.T01:CDS 10.0%
!!! TCATTTTTCTAAATTATTAT+CGG + Chr8:3143423-3143442 None:intergenic 10.0%
!!! TTATTTTCTCAAATTATTAT+CGG + Chr8:3143723-3143742 None:intergenic 10.0%
!! AAAAAAAAGAAAAAAGAGTT+TGG + Chr8:3143210-3143229 None:intergenic 15.0%
!! AAAATACGATGAATTAAAAT+AGG + Chr8:3143240-3143259 None:intergenic 15.0%
!! TAATCCTTTAAATATATTTG+GGG - Chr8:3143956-3143975 MsG0880042050.01.T01:CDS 15.0%
!! TAGATATATAATAGTTATCA+GGG - Chr8:3144105-3144124 MsG0880042050.01.T01:intron 15.0%
!! TGAAATGAATTACTAATATA+TGG - Chr8:3146262-3146281 MsG0880042050.01.T01:intron 15.0%
!! TTAGATATATAATAGTTATC+AGG - Chr8:3144104-3144123 MsG0880042050.01.T01:intron 15.0%
!!! TAGATTTTTTGTTTTGTTTT+TGG - Chr8:3143870-3143889 MsG0880042050.01.T01:intron 15.0%
!! AAAAAATTGTACGTGTTATA+TGG - Chr8:3145379-3145398 MsG0880042050.01.T01:intron 20.0%
!! AAAATAATAAGCATGGAAAA+TGG + Chr8:3146746-3146765 None:intergenic 20.0%
!! ATAGGTTAAAATGGTAAAAA+TGG - Chr8:3144230-3144249 MsG0880042050.01.T01:intron 20.0%
!! ATTAATAAAATTTACCGTCA+TGG + Chr8:3147347-3147366 None:intergenic 20.0%
!! TAAAAATGGAACATCAAAAA+CGG - Chr8:3144244-3144263 MsG0880042050.01.T01:intron 20.0%
!! TTAAATGTATTTACTTGTGT+CGG - Chr8:3143748-3143767 MsG0880042050.01.T01:intron 20.0%
!!! AAACTTGATTTTGTAAAATG+AGG + Chr8:3144021-3144040 None:intergenic 20.0%
!!! ATCTTAAATTTTTCTTGAGT+AGG - Chr8:3146111-3146130 MsG0880042050.01.T01:CDS 20.0%
!!! ATTTTCCATGCTTATTATTT+TGG - Chr8:3146745-3146764 MsG0880042050.01.T01:intron 20.0%
!!! TAAGGTTTAAGGTTTTTTTT+TGG + Chr8:3143062-3143081 None:intergenic 20.0%
!!! TATGACTCTAATTTTTTATG+AGG + Chr8:3147319-3147338 None:intergenic 20.0%
!!! TCTTAAATTTTTCTTGAGTA+GGG - Chr8:3146112-3146131 MsG0880042050.01.T01:CDS 20.0%
!!! TTATTATTTTGGGTTCATTA+GGG - Chr8:3146756-3146775 MsG0880042050.01.T01:intron 20.0%
!!! TTGATTTTCCTATGTATTAT+AGG - Chr8:3144978-3144997 MsG0880042050.01.T01:intron 20.0%
!!! TTTTCCATGCTTATTATTTT+GGG - Chr8:3146746-3146765 MsG0880042050.01.T01:intron 20.0%
! AAAACATTTGTATCTGTGAA+AGG - Chr8:3145310-3145329 MsG0880042050.01.T01:CDS 25.0%
! AAAAGTAGCAACAACATTAA+GGG + Chr8:3144406-3144425 None:intergenic 25.0%
! AAAGAATTTAGATGAAGCTA+AGG - Chr8:3147560-3147579 MsG0880042050.01.T01:five_prime_UTR 25.0%
! AAATTGCAGAAAATTTAGCA+TGG + Chr8:3145514-3145533 None:intergenic 25.0%
! AACTAGTTAGAAAAGAAGAA+TGG - Chr8:3143913-3143932 MsG0880042050.01.T01:CDS 25.0%
! AAGAATTTAGATGAAGCTAA+GGG - Chr8:3147561-3147580 MsG0880042050.01.T01:five_prime_UTR 25.0%
! AAGAGAAATTGAAAAGGATT+TGG + Chr8:3143178-3143197 None:intergenic 25.0%
! AAGAGTTCATAATCAAATCA+GGG - Chr8:3143540-3143559 MsG0880042050.01.T01:CDS 25.0%
! AGCAATTCATTATGAAGTTA+AGG + Chr8:3145644-3145663 None:intergenic 25.0%
! ATATCGCTTGAACTTATTTA+TGG - Chr8:3146335-3146354 MsG0880042050.01.T01:intron 25.0%
! ATATTAGGAAACTAAGCATT+TGG - Chr8:3144658-3144677 MsG0880042050.01.T01:CDS 25.0%
! CAAAGATAGACATGATTATT+CGG - Chr8:3144886-3144905 MsG0880042050.01.T01:CDS 25.0%
! CATAGGAAAATCAAATAAAC+TGG + Chr8:3144972-3144991 None:intergenic 25.0%
! CTTTAATAACATAGTACAAG+AGG - Chr8:3144206-3144225 MsG0880042050.01.T01:intron 25.0%
! TAACAAGATGAAAAGAAGAA+AGG + Chr8:3146874-3146893 None:intergenic 25.0%
! TACAAATAATACCTGAAAAG+AGG + Chr8:3144513-3144532 None:intergenic 25.0%
! TTCAATGTAATCATATGTGT+CGG - Chr8:3143448-3143467 MsG0880042050.01.T01:CDS 25.0%
! TTCAATTTCATCAACAACAA+TGG - Chr8:3143121-3143140 MsG0880042050.01.T01:intron 25.0%
! TTCCAAGTATTATATACCTT+CGG + Chr8:3145123-3145142 None:intergenic 25.0%
! TTGTGAAAGAGAAATTGAAA+AGG + Chr8:3143184-3143203 None:intergenic 25.0%
!! AAATTTTCTGCAATTTTACG+AGG - Chr8:3145518-3145537 MsG0880042050.01.T01:CDS 25.0%
!! ATTTAAGAATAGAGTATCTG+CGG + Chr8:3145809-3145828 None:intergenic 25.0%
!! GTTTCAATGTTTAAGGTTTA+AGG + Chr8:3143073-3143092 None:intergenic 25.0%
!!! AGGTTTTGTTTCAATGTTTA+AGG + Chr8:3143080-3143099 None:intergenic 25.0%
!!! AGGTTTTTTTTTGGTTTACT+AGG + Chr8:3143053-3143072 None:intergenic 25.0%
!!! CATTGAAACAAAACCTTTTT+TGG - Chr8:3143084-3143103 MsG0880042050.01.T01:CDS 25.0%
!!! CTTATTATTTTGGGTTCATT+AGG - Chr8:3146755-3146774 MsG0880042050.01.T01:intron 25.0%
!!! GATTAATTATGTTTTTGTGC+AGG - Chr8:3145407-3145426 MsG0880042050.01.T01:intron 25.0%
!!! GTATTATTTCTGTGACTAAT+CGG - Chr8:3146179-3146198 MsG0880042050.01.T01:intron 25.0%
!!! TATTATTTCTGTGACTAATC+GGG - Chr8:3146180-3146199 MsG0880042050.01.T01:intron 25.0%
AGTTTATAGAATGATAGAGG+CGG + Chr8:3145694-3145713 None:intergenic 30.0%
ATCTTAATCTGCTGAAATGT+TGG - Chr8:3143605-3143624 MsG0880042050.01.T01:intron 30.0%
ATTCTCTAGATAGAAACCTA+TGG + Chr8:3146636-3146655 None:intergenic 30.0%
ATTTGTGTAGATTGTTGACA+GGG - Chr8:3146600-3146619 MsG0880042050.01.T01:intron 30.0%
CAAAAGTAGCAACAACATTA+AGG + Chr8:3144407-3144426 None:intergenic 30.0%
CATCGATAAAAAAGTCTAGT+AGG + Chr8:3146313-3146332 None:intergenic 30.0%
CATGCCCCAAATATATTTAA+AGG + Chr8:3143963-3143982 None:intergenic 30.0%
CCAAGTTTATAGAATGATAG+AGG + Chr8:3145697-3145716 None:intergenic 30.0%
CCTCTATCATTCTATAAACT+TGG - Chr8:3145694-3145713 MsG0880042050.01.T01:intron 30.0%
CGAATAATCATGTCTATCTT+TGG + Chr8:3144888-3144907 None:intergenic 30.0%
CTCAATTTATATCTTGTAGC+TGG - Chr8:3144935-3144954 MsG0880042050.01.T01:CDS 30.0%
CTTGGATACCTATAATACAT+AGG + Chr8:3144989-3145008 None:intergenic 30.0%
GAAAGCTAACATCTTTCAAA+TGG + Chr8:3144743-3144762 None:intergenic 30.0%
GAAGAGTTCATAATCAAATC+AGG - Chr8:3143539-3143558 MsG0880042050.01.T01:CDS 30.0%
TACTACTTCGATTCTTACAT+TGG - Chr8:3144626-3144645 MsG0880042050.01.T01:CDS 30.0%
TCAGATTTGCACTTTCTTAA+AGG + Chr8:3145186-3145205 None:intergenic 30.0%
TCTAATTACTCAGGTACAAA+GGG - Chr8:3146405-3146424 MsG0880042050.01.T01:intron 30.0%
TCTTCGTCATAGTTAACAAA+AGG + Chr8:3147064-3147083 None:intergenic 30.0%
TGAACCCAAAATAATAAGCA+TGG + Chr8:3146753-3146772 None:intergenic 30.0%
TTATAGGTATCCAAGATTTG+TGG - Chr8:3144994-3145013 MsG0880042050.01.T01:intron 30.0%
TTGTACGTGTTATATGGATA+TGG - Chr8:3145385-3145404 MsG0880042050.01.T01:intron 30.0%
TTTGTTAACTATGACGAAGA+AGG - Chr8:3147064-3147083 MsG0880042050.01.T01:intron 30.0%
! AAATATATTTGGGGCATGTT+AGG - Chr8:3143965-3143984 MsG0880042050.01.T01:CDS 30.0%
! ACAAGAGGTATAGGTTAAAA+TGG - Chr8:3144221-3144240 MsG0880042050.01.T01:intron 30.0%
! ATGGGTTAAGTCTTTACAAT+TGG - Chr8:3147431-3147450 MsG0880042050.01.T01:intron 30.0%
! TAAATTTTTCTTGAGTAGGG+AGG - Chr8:3146115-3146134 MsG0880042050.01.T01:CDS 30.0%
! TAACATAGTACAAGAGGTAT+AGG - Chr8:3144212-3144231 MsG0880042050.01.T01:intron 30.0%
! TACCATTTTCTGAACTTAGA+TGG - Chr8:3145763-3145782 MsG0880042050.01.T01:CDS 30.0%
! TTTGATAGTCTTTGCATAGT+CGG + Chr8:3147098-3147117 None:intergenic 30.0%
!! ATCATGTCTATCTTTGGTTT+TGG + Chr8:3144882-3144901 None:intergenic 30.0%
!!! ATGTTGTTGCTACTTTTGTA+TGG - Chr8:3144409-3144428 MsG0880042050.01.T01:intron 30.0%
!!! CATTGGCTTTTGCAAATATT+AGG - Chr8:3144643-3144662 MsG0880042050.01.T01:CDS 30.0%
!!! CTTTTTGTTATTCCTGCTTT+TGG - Chr8:3146436-3146455 MsG0880042050.01.T01:intron 30.0%
!!! GAAACAAAACCTTTTTTGGT+CGG - Chr8:3143088-3143107 MsG0880042050.01.T01:CDS 30.0%
AAATTCACAAACCGAAGAAG+AGG + Chr8:3145671-3145690 None:intergenic 35.0%
AATGGTTGCAAAGTGATTGA+TGG - Chr8:3147412-3147431 MsG0880042050.01.T01:intron 35.0%
ACACAATCAAATATCCACTG+TGG + Chr8:3146667-3146686 None:intergenic 35.0%
AGGAAACTAAGCATTTGGAA+AGG - Chr8:3144663-3144682 MsG0880042050.01.T01:CDS 35.0%
ATATAGAAAGCGAGTCTATG+TGG - Chr8:3146909-3146928 MsG0880042050.01.T01:intron 35.0%
ATGGTTGCAAAGTGATTGAT+GGG - Chr8:3147413-3147432 MsG0880042050.01.T01:intron 35.0%
CAACTTCTTTCTAATGAACC+TGG - Chr8:3146005-3146024 MsG0880042050.01.T01:intron 35.0%
CACAAATGAAAGCAATAGCT+CGG + Chr8:3146587-3146606 None:intergenic 35.0%
CACTCATGCTTCTAATCAAA+AGG + Chr8:3143517-3143536 None:intergenic 35.0%
CAGGTTCATTAGAAAGAAGT+TGG + Chr8:3146007-3146026 None:intergenic 35.0%
CATTTGTGTAGATTGTTGAC+AGG - Chr8:3146599-3146618 MsG0880042050.01.T01:intron 35.0%
CTCTAGCGTTGTTTATGTTT+GGG - Chr8:3144057-3144076 MsG0880042050.01.T01:intron 35.0%
CTTATTTGTCGTAGCAATCT+TGG - Chr8:3146781-3146800 MsG0880042050.01.T01:intron 35.0%
GTCCATCTAAGTTCAGAAAA+TGG + Chr8:3145768-3145787 None:intergenic 35.0%
GTCTAATTACTCAGGTACAA+AGG - Chr8:3146404-3146423 MsG0880042050.01.T01:intron 35.0%
GTTAGCTGAATCTAAACAAG+TGG - Chr8:3145914-3145933 MsG0880042050.01.T01:CDS 35.0%
GTTCATTAGAAAGAAGTTGG+TGG + Chr8:3146004-3146023 None:intergenic 35.0%
TATCATGTGTCTAACCATGT+CGG + Chr8:3143494-3143513 None:intergenic 35.0%
TGAAAAGAGGTAGACTGATT+TGG + Chr8:3144500-3144519 None:intergenic 35.0%
TGCAGAAAATTTAGCATGGT+AGG + Chr8:3145510-3145529 None:intergenic 35.0%
TGTTTGCCAAGACTATCAAA+AGG + Chr8:3146146-3146165 None:intergenic 35.0%
TTAACAAAAGGTGACAAGTG+AGG + Chr8:3147052-3147071 None:intergenic 35.0%
TTCTTTGTCCTCTGCATAAA+TGG - Chr8:3147394-3147413 MsG0880042050.01.T01:intron 35.0%
TTTGCCGACAGAAAGTTATA+TGG - Chr8:3146702-3146721 MsG0880042050.01.T01:intron 35.0%
! AAACAGTGCAAGTATTGTCA+TGG + Chr8:3146382-3146401 None:intergenic 35.0%
! AAATCAGTCTACCTCTTTTC+AGG - Chr8:3144499-3144518 MsG0880042050.01.T01:CDS 35.0%
! AACAACATTAAGGGCATGTT+TGG + Chr8:3144397-3144416 None:intergenic 35.0%
! AGGATTTGGAGTATACTAAC+CGG + Chr8:3143164-3143183 None:intergenic 35.0%
! AGTATGTTTGAAGCCAAACT+TGG - Chr8:3144303-3144322 MsG0880042050.01.T01:intron 35.0%
! ATAGCTCGGTGAGTATAAAA+AGG + Chr8:3146573-3146592 None:intergenic 35.0%
! GTTTGGCTTCAAACATACTT+TGG + Chr8:3144302-3144321 None:intergenic 35.0%
! TGACAATACTTGCACTGTTT+TGG - Chr8:3146382-3146401 MsG0880042050.01.T01:intron 35.0%
! TGCCGAAGGTATATAATACT+TGG - Chr8:3145118-3145137 MsG0880042050.01.T01:CDS 35.0%
! TGTGCTAGTGTTTTCTTCAA+GGG - Chr8:3146810-3146829 MsG0880042050.01.T01:intron 35.0%
! TTGATAGTCTTTGCATAGTC+GGG + Chr8:3147097-3147116 None:intergenic 35.0%
! TTTCTGCAATTTTACGAGGT+CGG - Chr8:3145522-3145541 MsG0880042050.01.T01:CDS 35.0%
!! AAGGAGAGTGAAAAAGTATC+AGG - Chr8:3144270-3144289 MsG0880042050.01.T01:intron 35.0%
!! AGGAGAGTGAAAAAGTATCA+GGG - Chr8:3144271-3144290 MsG0880042050.01.T01:intron 35.0%
!! GTAAGACCTTTTGATAGTCT+TGG - Chr8:3146137-3146156 MsG0880042050.01.T01:CDS 35.0%
!! TAACGGACTTGTTTGCTTAT+AGG - Chr8:3144332-3144351 MsG0880042050.01.T01:intron 35.0%
!!! CCTCGGCTTTCTTTATTTTT+CGG + Chr8:3144815-3144834 None:intergenic 35.0%
!!! CTGTTTTGGTCTAATTACTC+AGG - Chr8:3146396-3146415 MsG0880042050.01.T01:intron 35.0%
!!! GTTGCTACTTTTGTATGGTA+GGG - Chr8:3144414-3144433 MsG0880042050.01.T01:intron 35.0%
!!! TGTTGCTACTTTTGTATGGT+AGG - Chr8:3144413-3144432 MsG0880042050.01.T01:intron 35.0%
!!! TTGCTACTTTTGTATGGTAG+GGG - Chr8:3144415-3144434 MsG0880042050.01.T01:intron 35.0%
!!! TTTGTTATTCCTGCTTTTGG+TGG - Chr8:3146439-3146458 MsG0880042050.01.T01:intron 35.0%
AAAACCACGAACTTGCAAAC+AGG - Chr8:3144841-3144860 MsG0880042050.01.T01:intron 40.0%
AAAAGGTCAAGGGAACTCAT+CGG - Chr8:3144709-3144728 MsG0880042050.01.T01:CDS 40.0%
AACTCCTCATCTACTACAAC+AGG - Chr8:3145461-3145480 MsG0880042050.01.T01:intron 40.0%
AAGCGGAAGAATTTCCTTTC+TGG + Chr8:3147137-3147156 None:intergenic 40.0%
AAGGTATGGGTATAGGTATC+AGG - Chr8:3144136-3144155 MsG0880042050.01.T01:CDS 40.0%
AAGTGGAGTCCAAGCAAAAA+GGG - Chr8:3145931-3145950 MsG0880042050.01.T01:CDS 40.0%
AATTGCTACAGCCTCTTCTT+CGG - Chr8:3145657-3145676 MsG0880042050.01.T01:intron 40.0%
ACAACCTGTTGTAGTAGATG+AGG + Chr8:3145468-3145487 None:intergenic 40.0%
ACAGCCTAAGAAAAAGGTCA+AGG - Chr8:3144698-3144717 MsG0880042050.01.T01:CDS 40.0%
AGAGTCATACAAAGCCATGA+CGG - Chr8:3147330-3147349 MsG0880042050.01.T01:intron 40.0%
AGATAGAAACCTATGGCCTT+GGG + Chr8:3146629-3146648 None:intergenic 40.0%
AGGTATGGGTATAGGTATCA+GGG - Chr8:3144137-3144156 MsG0880042050.01.T01:CDS 40.0%
ATACTACCAGGTATCAATCG+TGG - Chr8:3145336-3145355 MsG0880042050.01.T01:CDS 40.0%
ATATAGAAAGCGAGTCTGTG+TGG - Chr8:3146963-3146982 MsG0880042050.01.T01:intron 40.0%
ATGAAGCACAGACTCATACA+CGG - Chr8:3143668-3143687 MsG0880042050.01.T01:intron 40.0%
ATGCTGCAAAATTTGTCTCC+AGG - Chr8:3144454-3144473 MsG0880042050.01.T01:intron 40.0%
ATTGGACGACTGTCTTACAA+TGG - Chr8:3145030-3145049 MsG0880042050.01.T01:intron 40.0%
CAGCCTAAGAAAAAGGTCAA+GGG - Chr8:3144699-3144718 MsG0880042050.01.T01:CDS 40.0%
CCCACCATATAACTTTCTGT+CGG + Chr8:3146709-3146728 None:intergenic 40.0%
CCGAAAAATAAAGAAAGCCG+AGG - Chr8:3144812-3144831 MsG0880042050.01.T01:intron 40.0%
CCGACAGAAAGTTATATGGT+GGG - Chr8:3146706-3146725 MsG0880042050.01.T01:intron 40.0%
CTCTGATCAGATTCGTCAAA+AGG + Chr8:3146493-3146512 None:intergenic 40.0%
CTGTGACTAATCGGGAAATT+GGG - Chr8:3146188-3146207 MsG0880042050.01.T01:intron 40.0%
CTTTGCAACCATTTATGCAG+AGG + Chr8:3147405-3147424 None:intergenic 40.0%
GAGAATATGTTCAACCACAG+TGG - Chr8:3146650-3146669 MsG0880042050.01.T01:intron 40.0%
GATACCTATACCCATACCTT+TGG + Chr8:3144136-3144155 None:intergenic 40.0%
GCTCTAGCGTTGTTTATGTT+TGG - Chr8:3144056-3144075 MsG0880042050.01.T01:intron 40.0%
GGAAAAGAAGATTCACCTCA+GGG - Chr8:3147166-3147185 MsG0880042050.01.T01:intron 40.0%
GGAACATCAAAAACGGCAAA+AGG - Chr8:3144251-3144270 MsG0880042050.01.T01:intron 40.0%
GGCTTCAAACATACTTTGGA+TGG + Chr8:3144298-3144317 None:intergenic 40.0%
GTATATGTAATAGCACCCTG+AGG + Chr8:3147184-3147203 None:intergenic 40.0%
GTATTTACTTGTGTCGGACA+CGG - Chr8:3143754-3143773 MsG0880042050.01.T01:intron 40.0%
GTCGAAAAAGAAACATCTGC+CGG - Chr8:3147220-3147239 MsG0880042050.01.T01:intron 40.0%
GTTCTATGTTCTTCCAGCAA+AGG + Chr8:3144777-3144796 None:intergenic 40.0%
TAATAAGCGCAAGCAGAATG+AGG - Chr8:3147515-3147534 MsG0880042050.01.T01:five_prime_UTR 40.0%
TACTACCAGGTATCAATCGT+GGG - Chr8:3145337-3145356 MsG0880042050.01.T01:CDS 40.0%
TAGACATGATTATTCGGCAG+AGG - Chr8:3144892-3144911 MsG0880042050.01.T01:CDS 40.0%
TAGATAGAAACCTATGGCCT+TGG + Chr8:3146630-3146649 None:intergenic 40.0%
TAGATGAAGCTAAGGGTCAA+AGG - Chr8:3147568-3147587 MsG0880042050.01.T01:five_prime_UTR 40.0%
TATCTCGTACTCACAAGTTG+AGG - Chr8:3145287-3145306 MsG0880042050.01.T01:CDS 40.0%
TCTGTGACTAATCGGGAAAT+TGG - Chr8:3146187-3146206 MsG0880042050.01.T01:intron 40.0%
TGGAAAAGAAGATTCACCTC+AGG - Chr8:3147165-3147184 MsG0880042050.01.T01:intron 40.0%
TGTATGGTAGGGGAAGAAAA+AGG - Chr8:3144425-3144444 MsG0880042050.01.T01:intron 40.0%
TGTGACTAATCGGGAAATTG+GGG - Chr8:3146189-3146208 MsG0880042050.01.T01:intron 40.0%
TTGAGGGTCAGACAATAACA+TGG - Chr8:3145436-3145455 MsG0880042050.01.T01:intron 40.0%
TTGCTAGATTGGCACATGAA+TGG - Chr8:3145254-3145273 MsG0880042050.01.T01:intron 40.0%
TTTGTCGTAGCAATCTTGGT+TGG - Chr8:3146785-3146804 MsG0880042050.01.T01:intron 40.0%
! ATGTCTTCGATCAGAAGTGT+CGG - Chr8:3143803-3143822 MsG0880042050.01.T01:intron 40.0%
! CAGAAAGTTATATGGTGGGA+AGG - Chr8:3146710-3146729 MsG0880042050.01.T01:intron 40.0%
! CTTCTATGCGACAGATTTTC+AGG - Chr8:3146547-3146566 MsG0880042050.01.T01:intron 40.0%
! GAATCTTCTTTTCCAACACC+AGG + Chr8:3147160-3147179 None:intergenic 40.0%
! GATTTGGAGTATACTAACCG+GGG + Chr8:3143162-3143181 None:intergenic 40.0%
! GCGGAAATTCATGTTTCTGA+AGG + Chr8:3145790-3145809 None:intergenic 40.0%
! GGATTTGGAGTATACTAACC+GGG + Chr8:3143163-3143182 None:intergenic 40.0%
! GTGTGCTAGTGTTTTCTTCA+AGG - Chr8:3146809-3146828 MsG0880042050.01.T01:intron 40.0%
! GTTCCCTTGACCTTTTTCTT+AGG + Chr8:3144705-3144724 None:intergenic 40.0%
! GTTTGAAGCCAAACTTGGTT+TGG - Chr8:3144308-3144327 MsG0880042050.01.T01:intron 40.0%
! TGACCTTTTTCTTAGGCTGT+CGG + Chr8:3144698-3144717 None:intergenic 40.0%
! TGATCAGAGCATTACTCATC+AGG - Chr8:3146504-3146523 MsG0880042050.01.T01:intron 40.0%
! TGCTTACCTGTTTGCTAGAT+TGG - Chr8:3145243-3145262 MsG0880042050.01.T01:intron 40.0%
! TGTGAAAGGCATATACTACC+AGG - Chr8:3145324-3145343 MsG0880042050.01.T01:CDS 40.0%
! TTCGTGGTTTTTCTTTGCCT+CGG + Chr8:3144832-3144851 None:intergenic 40.0%
!! ACCATTCGTTGTTGATTCTC+CGG + Chr8:3147257-3147276 None:intergenic 40.0%
!! TTATGTTTTTGTGCAGGCTG+AGG - Chr8:3145413-3145432 MsG0880042050.01.T01:intron 40.0%
AAAAGAAACATCTGCCGGTG+TGG - Chr8:3147225-3147244 MsG0880042050.01.T01:intron 45.0%
AAGCAACTCAAGTAAGCACG+AGG + Chr8:3147372-3147391 None:intergenic 45.0%
AAGGAAATTCTTCCGCTTCC+TGG - Chr8:3147139-3147158 MsG0880042050.01.T01:intron 45.0%
ACAAAAGGTGACAAGTGAGG+TGG + Chr8:3147049-3147068 None:intergenic 45.0%
ACAGTCGTCCAATTCTCCAA+GGG + Chr8:3145023-3145042 None:intergenic 45.0%
ACCGGAGAATCAACAACGAA+TGG - Chr8:3147253-3147272 MsG0880042050.01.T01:intron 45.0%
ACGAACTTGCAAACAGGCTA+CGG - Chr8:3144847-3144866 MsG0880042050.01.T01:intron 45.0%
AGCTTCAAGTATCAGTCCAG+AGG + Chr8:3145889-3145908 None:intergenic 45.0%
AGCTTGTACACAAATGCCGA+AGG - Chr8:3145104-3145123 MsG0880042050.01.T01:CDS 45.0%
AGTGGAGTCCAAGCAAAAAG+GGG - Chr8:3145932-3145951 MsG0880042050.01.T01:CDS 45.0%
AGTTATCAGGGTCCATCCAA+AGG - Chr8:3144117-3144136 MsG0880042050.01.T01:CDS 45.0%
ATGGTAGGGGAAGAAAAAGG+AGG - Chr8:3144428-3144447 MsG0880042050.01.T01:intron 45.0%
CAAATCCCACGATTGATACC+TGG + Chr8:3145345-3145364 None:intergenic 45.0%
CAAGTGGAGTCCAAGCAAAA+AGG - Chr8:3145930-3145949 MsG0880042050.01.T01:CDS 45.0%
CATGTGCCAATCTAGCAAAC+AGG + Chr8:3145252-3145271 None:intergenic 45.0%
CCTATACCCATACCTTTGGA+TGG + Chr8:3144132-3144151 None:intergenic 45.0%
CTTAGCAGGTGAAGATGAAG+AGG - Chr8:3146052-3146071 MsG0880042050.01.T01:intron 45.0%
GCCGACAGAAAGTTATATGG+TGG - Chr8:3146705-3146724 MsG0880042050.01.T01:intron 45.0%
GCTACAGTCTCTGTTATGGT+TGG - Chr8:3143827-3143846 MsG0880042050.01.T01:intron 45.0%
GCTGTGTATGTGTCAACTCA+AGG + Chr8:3143385-3143404 None:intergenic 45.0%
GCTTCAAGTATCAGTCCAGA+GGG + Chr8:3145888-3145907 None:intergenic 45.0%
GGGATCATGATATCTTCGTG+TGG - Chr8:3146830-3146849 MsG0880042050.01.T01:intron 45.0%
TCACCTGCTAAGTCCTTAAC+CGG + Chr8:3146044-3146063 None:intergenic 45.0%
TCCGTTAGCCAAACCAAGTT+TGG + Chr8:3144319-3144338 None:intergenic 45.0%
TCTTCATCACGAACCTTTGC+TGG - Chr8:3144761-3144780 MsG0880042050.01.T01:CDS 45.0%
TGGTAGGGGAAGAAAAAGGA+GGG - Chr8:3144429-3144448 MsG0880042050.01.T01:intron 45.0%
TTTCTTGAGTGCTTGTGTCC+TGG + Chr8:3144475-3144494 None:intergenic 45.0%
! ACCTTTTTCTTAGGCTGTCG+GGG + Chr8:3144696-3144715 None:intergenic 45.0%
! ATTTTCTTGCTCTCTGACGC+AGG + Chr8:3145076-3145095 None:intergenic 45.0%
! CCATCCAAAGGTATGGGTAT+AGG - Chr8:3144129-3144148 MsG0880042050.01.T01:CDS 45.0%
! GACCTTTTTCTTAGGCTGTC+GGG + Chr8:3144697-3144716 None:intergenic 45.0%
! TAAACTTGGAGTATCCTCCC+AGG - Chr8:3145708-3145727 MsG0880042050.01.T01:intron 45.0%
! TCTGTTATGGTTGGCGTTGA+AGG - Chr8:3143836-3143855 MsG0880042050.01.T01:intron 45.0%
! TCTTTTCCAACACCAGGAAG+CGG + Chr8:3147154-3147173 None:intergenic 45.0%
!! GCCAAACTTGGTTTGGCTAA+CGG - Chr8:3144315-3144334 MsG0880042050.01.T01:intron 45.0%
!! TTTTGGTGGCACCGTTTCAT+GGG - Chr8:3146453-3146472 MsG0880042050.01.T01:intron 45.0%
AAAGGTGACAAGTGAGGTGG+AGG + Chr8:3147046-3147065 None:intergenic 50.0%
ACCCCGACAGCCTAAGAAAA+AGG - Chr8:3144692-3144711 MsG0880042050.01.T01:CDS 50.0%
ACCGTTTCATGGGAGGGAAA+GGG - Chr8:3146463-3146482 MsG0880042050.01.T01:intron 50.0%
AGGCTGATCGTATCAAGCAG+CGG - Chr8:3147535-3147554 MsG0880042050.01.T01:five_prime_UTR 50.0%
ATCCTCCCAGGCTTGATACT+CGG - Chr8:3145720-3145739 MsG0880042050.01.T01:CDS 50.0%
ATTCTTCCGCTTCCTGGTGT+TGG - Chr8:3147145-3147164 MsG0880042050.01.T01:intron 50.0%
ATTGTTGACAGGGATGCCCA+AGG - Chr8:3146610-3146629 MsG0880042050.01.T01:intron 50.0%
CACCTGCTAAGTCCTTAACC+GGG + Chr8:3146043-3146062 None:intergenic 50.0%
CCAAGATTTGTGGATGCCCT+TGG - Chr8:3145004-3145023 MsG0880042050.01.T01:intron 50.0%
CCACTGCTTCCGACCAAAAA+AGG + Chr8:3143100-3143119 None:intergenic 50.0%
CGAACTTGCAAACAGGCTAC+GGG - Chr8:3144848-3144867 MsG0880042050.01.T01:intron 50.0%
GACAGTCGTCCAATTCTCCA+AGG + Chr8:3145024-3145043 None:intergenic 50.0%
GTAGCCTGTTTGCAAGTTCG+TGG + Chr8:3144848-3144867 None:intergenic 50.0%
TCAGGGTCCATCCAAAGGTA+TGG - Chr8:3144122-3144141 MsG0880042050.01.T01:CDS 50.0%
TCCAACCGAGTATCAAGCCT+GGG + Chr8:3145728-3145747 None:intergenic 50.0%
TCCAAGCAAAAAGGGGCAGA+TGG - Chr8:3145939-3145958 MsG0880042050.01.T01:CDS 50.0%
TGTGGATGCCCTTGGAGAAT+TGG - Chr8:3145012-3145031 MsG0880042050.01.T01:intron 50.0%
TTCCAACCGAGTATCAAGCC+TGG + Chr8:3145729-3145748 None:intergenic 50.0%
TTTGTGCAGGCTGAGGTTGA+GGG - Chr8:3145420-3145439 MsG0880042050.01.T01:intron 50.0%
! ACCATCTGCCCCTTTTTGCT+TGG + Chr8:3145943-3145962 None:intergenic 50.0%
! CAGGGTCCATCCAAAGGTAT+GGG - Chr8:3144123-3144142 MsG0880042050.01.T01:CDS 50.0%
! TTTTGTGCAGGCTGAGGTTG+AGG - Chr8:3145419-3145438 MsG0880042050.01.T01:intron 50.0%
!! CCAAGGGCATCCACAAATCT+TGG + Chr8:3145007-3145026 None:intergenic 50.0%
!! CGGTGCTACAGTCTCTGTTA+TGG - Chr8:3143823-3143842 MsG0880042050.01.T01:intron 50.0%
!! CTTTTGGTGGCACCGTTTCA+TGG - Chr8:3146452-3146471 MsG0880042050.01.T01:intron 50.0%
!!! CCTTTTTTGGTCGGAAGCAG+TGG - Chr8:3143097-3143116 MsG0880042050.01.T01:CDS 50.0%
AACCGAGTATCAAGCCTGGG+AGG + Chr8:3145725-3145744 None:intergenic 55.0%
ACTTGTGTCGGACACGGACA+CGG - Chr8:3143760-3143779 MsG0880042050.01.T01:intron 55.0%
CACCCGGTTAAGGACTTAGC+AGG - Chr8:3146038-3146057 MsG0880042050.01.T01:intron 55.0%
CACCGTTTCATGGGAGGGAA+AGG - Chr8:3146462-3146481 MsG0880042050.01.T01:intron 55.0%
CCCCTTTCCCTCCCATGAAA+CGG + Chr8:3146467-3146486 None:intergenic 55.0%
CCGTTTCATGGGAGGGAAAG+GGG - Chr8:3146464-3146483 MsG0880042050.01.T01:intron 55.0%
CGTTTCATGGGAGGGAAAGG+GGG - Chr8:3146465-3146484 MsG0880042050.01.T01:intron 55.0%
CTTGCAAGCTGCTGCCAGAA+AGG - Chr8:3147120-3147139 MsG0880042050.01.T01:intron 55.0%
GGTGAAACACTACAGAGCCC+CGG - Chr8:3143142-3143161 MsG0880042050.01.T01:intron 55.0%
TCCCAGGCTTGATACTCGGT+TGG - Chr8:3145724-3145743 MsG0880042050.01.T01:CDS 55.0%
TTCTCCGGTCTGTACCACAC+CGG + Chr8:3147242-3147261 None:intergenic 55.0%
! TCCAGAGGGTTTGCTCGCAT+TGG + Chr8:3145874-3145893 None:intergenic 55.0%
! TGCACTGATGCACCCGGTTA+AGG - Chr8:3146028-3146047 MsG0880042050.01.T01:intron 55.0%
!! GAAACGGTGCCACCAAAAGC+AGG + Chr8:3146451-3146470 None:intergenic 55.0%
ACAGGGATGCCCAAGGCCAT+AGG - Chr8:3146617-3146636 MsG0880042050.01.T01:intron 60.0%
CGGTTGGAAGCTTTCGCAGC+AGG - Chr8:3145740-3145759 MsG0880042050.01.T01:CDS 60.0%
GCCAATGCGAGCAAACCCTC+TGG - Chr8:3145870-3145889 MsG0880042050.01.T01:CDS 60.0%
GGTGGCACCGTTTCATGGGA+GGG - Chr8:3146457-3146476 MsG0880042050.01.T01:intron 60.0%
GTCTGTGTTGGACGCCGACA+TGG - Chr8:3143477-3143496 MsG0880042050.01.T01:CDS 60.0%
TCTGCCGGTGTGGTACAGAC+CGG - Chr8:3147235-3147254 MsG0880042050.01.T01:intron 60.0%
TGGTGGCACCGTTTCATGGG+AGG - Chr8:3146456-3146475 MsG0880042050.01.T01:intron 60.0%
! ACCTGGTGCACTGATGCACC+CGG - Chr8:3146022-3146041 MsG0880042050.01.T01:intron 60.0%
!! TGTCGGTGTCGCGTCTGTGT+TGG - Chr8:3143465-3143484 MsG0880042050.01.T01:CDS 60.0%
ACCGGGTGCATCAGTGCACC+AGG + Chr8:3146026-3146045 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3143020 3147611 3143020 ID=MsG0880042050.01;Name=MsG0880042050.01
Chr8 mRNA 3143020 3147611 3143020 ID=MsG0880042050.01.T01;Parent=MsG0880042050.01;Name=MsG0880042050.01.T01;_AED=0.15;_eAED=0.15;_QI=120|0.90|0.91|1|0.90|0.91|12|15|578
Chr8 exon 3143020 3143121 3143020 ID=MsG0880042050.01.T01:exon:1521;Parent=MsG0880042050.01.T01
Chr8 exon 3143280 3143592 3143280 ID=MsG0880042050.01.T01:exon:1520;Parent=MsG0880042050.01.T01
Chr8 exon 3143900 3144021 3143900 ID=MsG0880042050.01.T01:exon:1519;Parent=MsG0880042050.01.T01
Chr8 exon 3144106 3144213 3144106 ID=MsG0880042050.01.T01:exon:1518;Parent=MsG0880042050.01.T01
Chr8 exon 3144495 3144784 3144495 ID=MsG0880042050.01.T01:exon:1517;Parent=MsG0880042050.01.T01
Chr8 exon 3144870 3144963 3144870 ID=MsG0880042050.01.T01:exon:1516;Parent=MsG0880042050.01.T01
Chr8 exon 3145092 3145202 3145092 ID=MsG0880042050.01.T01:exon:1515;Parent=MsG0880042050.01.T01
Chr8 exon 3145286 3145370 3145286 ID=MsG0880042050.01.T01:exon:1514;Parent=MsG0880042050.01.T01
Chr8 exon 3145506 3145631 3145506 ID=MsG0880042050.01.T01:exon:1513;Parent=MsG0880042050.01.T01
Chr8 exon 3145718 3146008 3145718 ID=MsG0880042050.01.T01:exon:1512;Parent=MsG0880042050.01.T01
Chr8 exon 3146111 3146196 3146111 ID=MsG0880042050.01.T01:exon:1511;Parent=MsG0880042050.01.T01
Chr8 exon 3147468 3147611 3147468 ID=MsG0880042050.01.T01:exon:1510;Parent=MsG0880042050.01.T01
Chr8 five_prime_UTR 3147492 3147611 3147492 ID=MsG0880042050.01.T01:five_prime_utr;Parent=MsG0880042050.01.T01
Chr8 CDS 3147468 3147491 3147468 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3146111 3146196 3146111 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3145718 3146008 3145718 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3145506 3145631 3145506 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3145286 3145370 3145286 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3145092 3145202 3145092 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3144870 3144963 3144870 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3144495 3144784 3144495 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3144106 3144213 3144106 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3143900 3144021 3143900 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3143280 3143592 3143280 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 CDS 3143035 3143121 3143035 ID=MsG0880042050.01.T01:cds;Parent=MsG0880042050.01.T01
Chr8 three_prime_UTR 3143020 3143034 3143020 ID=MsG0880042050.01.T01:three_prime_utr;Parent=MsG0880042050.01.T01
Gene Sequence

>MsG0880042050.01.T01

ATGGTGAAACACTACAGAGCCCCGGGGAAGAAAAAGGAGGGAAATGCTGCAAAATTTGTCTCCAGGACACAAGCACTCAAGAAACTCCAAATCAGTCTACCTCTTTTCAGTGTTACTACTTCGATTCTTACATTGGCTTTTGCAAATATTAGGAAACTAAGCATTTGGAAAGGTGTAACACCCCGACAGCCTAAGAAAAAGGTCAAGGGAACTCATCGGACTTATTACCATTTGAAAGATGTTAGCTTTCTTCATCACGAACCTTTGCTGGAAGAACATAGAACAATTAGAGTACATGACCGAAAAATAAAGAAAGCCGAGGCAAAGAAAAACCACGAACTTGCAAACAGGCTACGGGAGAAAACTCCAAAACCAAAGATAGACATGATTATTCGGCAGAGGTATCCAAGATTTGTGGATGCCCTTGGAGAATTGGACGACTGTCTTACAATGGTGCATCTCTTTGCAGCATTACCTGCGTCAGAGAGCAAGAAAATTGATGTAGAGCTTGTACACAAATGCCGAAGATTGGCACATGAATGGCAAGCATTCATATCTCGTACTCACAAGTTGAGGAAAACATTTGTATCTGTGAAAGGCATATACTACCAGGCTGAGGTTGAGGGTCAGACAATAACATGGTTAACTCCTCATCTACTACAACAGGTTGTGTCTGATGATGTTGACATGCCTACCATGCTAAATTTTCTGCAATTTTACGAGCCTCTTCTTCGGTTTGTGAATTTCCGCCTCTATCATTCTATAAACTTGGAGTATCCTCCCAGGCTTGATACTCGGTTGGAAGCTTTCGCAGCAGATCTATATGCACTTTCAAAATATGCCAATGCGAGCAAACCCTCTGGACTGATACTTGAAGCTTCTCAGTTAGCTGAATCTAAACAAGTGGAGTCCAAGCAAAAAGGGGCAGATGGTGAAAATGAAAAATCTGAACTAAGACTTGCTCAACTTCACCACCAACTTCTTTCTAATGAACCTGGTGCACTGATGCACCCGGTTAAGGACTTAGCAGGTGAAGATGAAGAGGATCGAGATACAAGAGAATGTAAAAATCTCTTCAAAAATCTTAAATTTTTCTTGAGTAGGGAGGTACAAAGGGAATCATTACTTTTTGTTATTCCTGCTTTTGGTGGCACCGTTTCATGGGAGGGAAAGGGGGCACCTTTTGACGAATCTGATCAGAGCATTACTCATCAGATTGTTGACAGGGATGCCCAAGGCCATAGGTTTCTATCTAGAGAATATGTTCAACCACAGTGGATATTTGATTGTGTAAATGCACGCATAATTTTGCCGACAGAAAGTTATATGGTGGGAAGGATTCCTCCACCTCACTTGTCACCTTTTGTTAACTATGACGAAGAAGGCTACACTCCCGACTATGCAAAGACTATCAAACACTTGCAAGCTGCTGCCAGAAAGGAAATTCTTCCGCTTCCTGGTGTTGGAAAAGAAGATTCACCTCAGGGTGCTATTACATATACTTCAGCAGATTCTATTGTCGAAAAAGAAACATCTGCCGGTGTGGTACAGACCGGAGAATCAACAACGAATGGTCAAGAAAATGTCGATACTGATATGAGTTTACTTATGATGCCTCATAAAAAATTAGAGTCATACAAAGCCATGACGATATCTAATAAGCGCAAGCAGAATGAGGCTGATCGTATCAAGCAGCGGAAAAAGAATTTAGATGAAGCTAAGGGTCAAAGGAGTTGA
Protein sequence

>MsG0880042050.01.T01

MVKHYRAPGKKKEGNAAKFVSRTQALKKLQISLPLFSVTTSILTLAFANIRKLSIWKGVTPRQPKKKVKGTHRTYYHLKDVSFLHHEPLLEEHRTIRVHDRKIKKAEAKKNHELANRLREKTPKPKIDMIIRQRYPRFVDALGELDDCLTMVHLFAALPASESKKIDVELVHKCRRLAHEWQAFISRTHKLRKTFVSVKGIYYQAEVEGQTITWLTPHLLQQVVSDDVDMPTMLNFLQFYEPLLRFVNFRLYHSINLEYPPRLDTRLEAFAADLYALSKYANASKPSGLILEASQLAESKQVESKQKGADGENEKSELRLAQLHHQLLSNEPGALMHPVKDLAGEDEEDRDTRECKNLFKNLKFFLSREVQRESLLFVIPAFGGTVSWEGKGAPFDESDQSITHQIVDRDAQGHRFLSREYVQPQWIFDCVNARIILPTESYMVGRIPPPHLSPFVNYDEEGYTPDYAKTIKHLQAAARKEILPLPGVGKEDSPQGAITYTSADSIVEKETSAGVVQTGESTTNGQENVDTDMSLLMMPHKKLESYKAMTISNKRKQNEADRIKQRKKNLDEAKGQRS*