AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040049.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040049.01.T01 MTR_7g083720 98.639 294 4 0 40 333 1 294 0.0 599
MsG0780040049.01.T01 MTR_7g083720 98.639 294 4 0 40 333 1 294 0.0 599
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040049.01.T01 AT1G12840 81.293 294 53 1 40 333 1 292 1.14e-178 500

Find 73 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGGCCCTCATGTGTTTC+TGG 0.156192 7:-72446898 None:intergenic
AGAACTAGTGCACGTGAAAA+AGG 0.216056 7:+72446679 MsG0780040049.01.T01:CDS
GAAGAACTGGAGCGAGTTTC+CGG 0.223607 7:+72443017 MsG0780040049.01.T01:CDS
ACAACTCTTCATCTTCGATT+TGG 0.299022 7:+72442611 MsG0780040049.01.T01:CDS
TACAACTTCTTAGAAGATCT+TGG 0.321978 7:-72446595 None:intergenic
TATGCAGTCTAATGCTTTCA+TGG 0.327769 7:+72442962 MsG0780040049.01.T01:intron
CGAACCTTCCAGTTTGCTTT+CGG 0.329656 7:-72446155 None:intergenic
TATTGGATCTAGATTTGTTT+GGG 0.333247 7:+72443168 MsG0780040049.01.T01:intron
GTATTGGATCTAGATTTGTT+TGG 0.346442 7:+72443167 MsG0780040049.01.T01:intron
CCTTTGAAGGAGATTGTTGA+TGG 0.366580 7:+72443217 MsG0780040049.01.T01:CDS
GCATAATACCTCTCCATAAC+TGG 0.367897 7:-72446989 None:intergenic
CCAATCCTTCTGTGAATACT+TGG 0.375349 7:-72446337 None:intergenic
ATAAAATGGCAAACAGGTAC+TGG 0.382270 7:+72442563 MsG0780040049.01.T01:CDS
ATTTATCCAACTCCTGCTTT+CGG 0.386099 7:-72446915 None:intergenic
TCCGACTATGTCGCCTTTGA+AGG 0.386436 7:+72443204 MsG0780040049.01.T01:CDS
GCTATAAACCGAAAGCAAAC+TGG 0.411256 7:+72446147 MsG0780040049.01.T01:CDS
AAGATGAAGAGTTGTTGTTC+TGG 0.419883 7:-72442603 None:intergenic
CAGGCGTCAGATTGAAGAAC+TGG 0.420504 7:+72443004 MsG0780040049.01.T01:CDS
AGTTCGTGATCTTTCTAACT+TGG 0.424259 7:+72446257 MsG0780040049.01.T01:CDS
CAATGGTGCTATGCCAGTTA+TGG 0.439580 7:+72446976 MsG0780040049.01.T01:CDS
AGAGTTCCAACACGGAGATT+AGG 0.444470 7:-72442807 None:intergenic
ACTGCTGGTCTCACCGTTGA+TGG 0.446979 7:+72443047 MsG0780040049.01.T01:CDS
GAAGAGTTGTTGTTCTGGAC+GGG 0.448429 7:-72442598 None:intergenic
AGGAGTATCGAAGGAATGCT+TGG 0.449300 7:-72442656 None:intergenic
CCGTTGATTCATACTTGACT+AGG 0.454820 7:+72443075 MsG0780040049.01.T01:CDS
CCAAGTATTCACAGAAGGAT+TGG 0.455442 7:+72446337 MsG0780040049.01.T01:CDS
ACAACTTCTTAGAAGATCTT+GGG 0.467331 7:-72446594 None:intergenic
AACACATGAGGGCCGAAAGC+AGG 0.471760 7:+72446903 MsG0780040049.01.T01:CDS
TCTGAAATTATAATGTCCTC+TGG 0.480057 7:-72446285 None:intergenic
GGATAAATTGATGCAAGATC+AGG 0.480813 7:+72446930 MsG0780040049.01.T01:CDS
CTAGTCAAGTATGAATCAAC+GGG 0.488289 7:-72443074 None:intergenic
TAGAATAGAGTCGGATAAAG+TGG 0.496948 7:+72441656 MsG0780040049.01.T01:CDS
GTTTCCGGTGTTAACACTGC+TGG 0.496991 7:+72443032 MsG0780040049.01.T01:CDS
TGAGGGGTTCTCTGCTGCAA+TGG 0.511174 7:+72446959 MsG0780040049.01.T01:CDS
TGCAAGATCAGGAAAGTTTG+AGG 0.516872 7:+72446941 MsG0780040049.01.T01:CDS
GCAAGATCAGGAAAGTTTGA+GGG 0.521056 7:+72446942 MsG0780040049.01.T01:CDS
AAGGTGTTTCGAGCAAGATC+AGG 0.521520 7:+72442985 MsG0780040049.01.T01:CDS
AACATTCCTAATCTCCGTGT+TGG 0.528436 7:+72442801 MsG0780040049.01.T01:CDS
ATCTTCTAAGAAGTTGTATG+AGG 0.532393 7:+72446600 MsG0780040049.01.T01:CDS
CAGTCTAATGCTTTCATGGA+AGG 0.536029 7:+72442966 MsG0780040049.01.T01:intron
CCTAGTCAAGTATGAATCAA+CGG 0.542235 7:-72443075 None:intergenic
TGAGGGCCGAAAGCAGGAGT+TGG 0.545604 7:+72446909 MsG0780040049.01.T01:CDS
TAGTCAAGTCGCTAAGATTG+AGG 0.554636 7:+72443246 MsG0780040049.01.T01:CDS
TGAAGAGTTGTTGTTCTGGA+CGG 0.558607 7:-72442599 None:intergenic
TAAAATGGCAAACAGGTACT+GGG 0.564084 7:+72442564 MsG0780040049.01.T01:CDS
CCATCAACAATCTCCTTCAA+AGG 0.568657 7:-72443217 None:intergenic
TAAGATTGAGGATGATCTCA+AGG 0.580294 7:+72443258 MsG0780040049.01.T01:CDS
AAGAGTTGTTGTTCTGGACG+GGG 0.581423 7:-72442597 None:intergenic
ACTTCGGATATTATTATACT+CGG 0.589484 7:-72446115 None:intergenic
CTTGGTGAGATCATCGCTGA+GGG 0.591407 7:-72442844 None:intergenic
TGTATCCAAGTATTCACAGA+AGG 0.592514 7:+72446332 MsG0780040049.01.T01:CDS
GACTCATATTAGAATAGAGT+CGG 0.593347 7:+72441647 MsG0780040049.01.T01:CDS
TCCTTCAAAGGCGACATAGT+CGG 0.593872 7:-72443205 None:intergenic
TTATAGCGTTGAGCTGACTT+CGG 0.597926 7:-72446131 None:intergenic
CTTGGATACAATCGCAAGGA+GGG 0.604122 7:-72446319 None:intergenic
TTCTAACTTGGTAAAACCAG+AGG 0.607817 7:+72446269 MsG0780040049.01.T01:CDS
AGTTAGATTACTCTGTAGAG+AGG 0.619155 7:-72442676 None:intergenic
CAAGATCAGGAAAGTTTGAG+GGG 0.631451 7:+72446943 MsG0780040049.01.T01:CDS
TCTGTAGAGAGGAGTATCGA+AGG 0.643816 7:-72442665 None:intergenic
ATCAACGGGAACTCCATCAA+CGG 0.645896 7:-72443060 None:intergenic
TGAAACATTGACTAGCTATG+TGG 0.657544 7:+72446371 MsG0780040049.01.T01:CDS
TGTAACACTCTTCAATCGTG+TGG 0.664450 7:+72446645 MsG0780040049.01.T01:CDS
GTGCTATGCCAGTTATGGAG+AGG 0.670859 7:+72446981 MsG0780040049.01.T01:CDS
TAAACCGAAAGCAAACTGGA+AGG 0.677828 7:+72446151 MsG0780040049.01.T01:CDS
AATACTTGGATACAATCGCA+AGG 0.681599 7:-72446323 None:intergenic
CCTTGGTGAGATCATCGCTG+AGG 0.684144 7:-72442845 None:intergenic
GAGAATCTAGAGTTCCAACA+CGG 0.689268 7:-72442815 None:intergenic
TACAGTCCAGAAACACATGA+GGG 0.696017 7:+72446892 MsG0780040049.01.T01:CDS
ACTTGGATACAATCGCAAGG+AGG 0.701302 7:-72446320 None:intergenic
GAGACCAGCAGTGTTAACAC+CGG 0.714693 7:-72443036 None:intergenic
ATACAGTCCAGAAACACATG+AGG 0.715627 7:+72446891 MsG0780040049.01.T01:CDS
CCTCAGCGATGATCTCACCA+AGG 0.724666 7:+72442845 MsG0780040049.01.T01:CDS
AATGGCAAACAGGTACTGGG+TGG 0.739017 7:+72442567 MsG0780040049.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTTATATGAAATTTAA+TGG + Chr7:72444219-72444238 MsG0780040049.01.T01:intron 10.0%
!! AATTAATCTTATATTAATCA+AGG - Chr7:72445888-72445907 None:intergenic 10.0%
!! ATTAATCTTATATTAATCAA+GGG - Chr7:72445887-72445906 None:intergenic 10.0%
!!! TTTTTATTTATTTGTAAGAA+TGG + Chr7:72442443-72442462 MsG0780040049.01.T01:intron 10.0%
!! AACACTAATAGTATAAATAA+GGG - Chr7:72443396-72443415 None:intergenic 15.0%
!! AATTAAAAGAAATACTTACT+TGG - Chr7:72446708-72446727 None:intergenic 15.0%
!! GAAAAAAATAATAAAGCATA+TGG + Chr7:72445297-72445316 MsG0780040049.01.T01:intron 15.0%
!! TTAAAATCCCTATTTAAATA+TGG + Chr7:72445601-72445620 MsG0780040049.01.T01:intron 15.0%
!! TTAATCTTATATTAATCAAG+GGG - Chr7:72445886-72445905 None:intergenic 15.0%
!! TTACAAATATAAATATTAGC+TGG - Chr7:72444013-72444032 None:intergenic 15.0%
!!! ATGTTATTTTATATCATCAA+GGG - Chr7:72445409-72445428 None:intergenic 15.0%
!!! CTAATTAGGTTAAATATTTT+AGG + Chr7:72446570-72446589 MsG0780040049.01.T01:intron 15.0%
!!! TATGTTATTTTATATCATCA+AGG - Chr7:72445410-72445429 None:intergenic 15.0%
!!! TATTATTATTTTTGTATCTG+AGG - Chr7:72442325-72442344 None:intergenic 15.0%
!! AACACTCGTAAAAAATAAAA+TGG + Chr7:72442549-72442568 MsG0780040049.01.T01:CDS 20.0%
!! AAGATCGATGAATTAATTAA+AGG - Chr7:72442755-72442774 None:intergenic 20.0%
!! ATGTTCTTTGTAATATTTCT+CGG - Chr7:72446009-72446028 None:intergenic 20.0%
!! ATTCATATACAAAATACCAA+CGG + Chr7:72443749-72443768 MsG0780040049.01.T01:intron 20.0%
!! ATTTATACTATTAGTGTTGT+TGG + Chr7:72443398-72443417 MsG0780040049.01.T01:intron 20.0%
!! ATTTCTCAAGAAATATATGT+GGG - Chr7:72442148-72442167 None:intergenic 20.0%
!! CAACACTAATAGTATAAATA+AGG - Chr7:72443397-72443416 None:intergenic 20.0%
!! CTTCAACTCAAATATAAATA+CGG - Chr7:72443898-72443917 None:intergenic 20.0%
!! TAAAAAATAAAATGGCAAAC+AGG + Chr7:72442557-72442576 MsG0780040049.01.T01:CDS 20.0%
!! TATTTCTCAAGAAATATATG+TGG - Chr7:72442149-72442168 None:intergenic 20.0%
!! TCGAATATCAATTCATAATT+TGG + Chr7:72446815-72446834 MsG0780040049.01.T01:intron 20.0%
!! TCTCATTATTATATATTAGC+TGG - Chr7:72443950-72443969 None:intergenic 20.0%
!! TGTCTTATAGTATAATAGTA+TGG + Chr7:72445939-72445958 MsG0780040049.01.T01:intron 20.0%
!! TTAGAGTCCATATTTAAATA+GGG - Chr7:72445611-72445630 None:intergenic 20.0%
!! TTTAAAGGTAATTATATGAC+AGG - Chr7:72445684-72445703 None:intergenic 20.0%
!!! AAACATACGATTCTAAAAAA+AGG + Chr7:72444586-72444605 MsG0780040049.01.T01:intron 20.0%
!!! AACATACGATTCTAAAAAAA+GGG + Chr7:72444587-72444606 MsG0780040049.01.T01:intron 20.0%
!!! AGCTTGATCTTTTTAATTTT+GGG + Chr7:72444069-72444088 MsG0780040049.01.T01:intron 20.0%
!!! ATTCTATTTTGGGTAATTTT+TGG + Chr7:72444795-72444814 MsG0780040049.01.T01:intron 20.0%
!!! TACAAAATTTTGTGAAATAG+TGG + Chr7:72443491-72443510 MsG0780040049.01.T01:intron 20.0%
!!! TCTTCAACTTTAAAAAGTTT+TGG + Chr7:72445107-72445126 MsG0780040049.01.T01:intron 20.0%
!!! TGTCTTCAATTTGTTAATAT+TGG + Chr7:72446740-72446759 MsG0780040049.01.T01:intron 20.0%
!!! TGTTAGATTTTCAACATTAT+TGG + Chr7:72441728-72441747 MsG0780040049.01.T01:intron 20.0%
!!! TTTAGAGTCCATATTTAAAT+AGG - Chr7:72445612-72445631 None:intergenic 20.0%
!!! TTTTCTTAGATAGCATATTT+TGG + Chr7:72443813-72443832 MsG0780040049.01.T01:intron 20.0%
! AAAATCTAACAAACATTGAG+TGG - Chr7:72441719-72441738 None:intergenic 25.0%
! AAAATGTGTTTATACGAAGT+TGG + Chr7:72442481-72442500 MsG0780040049.01.T01:intron 25.0%
! AAAATTAAACGAGAAATCTG+AGG - Chr7:72442297-72442316 None:intergenic 25.0%
! AACATACTTTATTGATCCAA+GGG + Chr7:72445424-72445443 MsG0780040049.01.T01:intron 25.0%
! AACATATACCGCATATATAT+AGG - Chr7:72443925-72443944 None:intergenic 25.0%
! AATAAACCCAAAGTTTATTC+CGG - Chr7:72445572-72445591 None:intergenic 25.0%
! AATAGAATCGTATGTAACTA+AGG - Chr7:72444783-72444802 None:intergenic 25.0%
! ACATATACCGCATATATATA+GGG - Chr7:72443924-72443943 None:intergenic 25.0%
! ACTTCGGATATTATTATACT+CGG - Chr7:72446118-72446137 None:intergenic 25.0%
! AGATTACATATTCTCTTAAG+AGG + Chr7:72444178-72444197 MsG0780040049.01.T01:intron 25.0%
! AGTTAAATAGATGATTAGTG+AGG - Chr7:72442703-72442722 None:intergenic 25.0%
! ATAAAACGTTTAGAAACAGA+TGG + Chr7:72445266-72445285 MsG0780040049.01.T01:intron 25.0%
! ATAGAATCGTATGTAACTAA+GGG - Chr7:72444782-72444801 None:intergenic 25.0%
! GAATGTTTAGATGAATTACA+GGG - Chr7:72446474-72446493 None:intergenic 25.0%
! GATTACATATTCTCTTAAGA+GGG + Chr7:72444179-72444198 MsG0780040049.01.T01:intron 25.0%
! GTTAAATAGATGATTAGTGA+GGG - Chr7:72442702-72442721 None:intergenic 25.0%
! TAAAACGTTTAGAAACAGAT+GGG + Chr7:72445267-72445286 MsG0780040049.01.T01:intron 25.0%
! TAAATTTATGATATGGTCTG+CGG + Chr7:72443777-72443796 MsG0780040049.01.T01:intron 25.0%
! TAACATACTTTATTGATCCA+AGG + Chr7:72445423-72445442 MsG0780040049.01.T01:intron 25.0%
! TAAGAAACAGACAATCAATT+GGG - Chr7:72443867-72443886 None:intergenic 25.0%
! TATATATATGCGGTATATGT+TGG + Chr7:72443924-72443943 MsG0780040049.01.T01:intron 25.0%
! TATATTCGTTGGACATTATT+GGG - Chr7:72442230-72442249 None:intergenic 25.0%
! TCAATCTCGATAATATTACA+TGG + Chr7:72441756-72441775 MsG0780040049.01.T01:intron 25.0%
! TCTACAATTATTTGCTTCAT+CGG - Chr7:72445775-72445794 None:intergenic 25.0%
! TTAAGAAACAGACAATCAAT+TGG - Chr7:72443868-72443887 None:intergenic 25.0%
! TTCATATACAAAATACCAAC+GGG + Chr7:72443750-72443769 MsG0780040049.01.T01:intron 25.0%
!! AATAAAGCATATGGATTATC+TGG + Chr7:72445306-72445325 MsG0780040049.01.T01:intron 25.0%
!! AGTTACATACGATTCTATTT+TGG + Chr7:72444784-72444803 MsG0780040049.01.T01:intron 25.0%
!! ATATACCCAGATTTTATTGA+TGG + Chr7:72442166-72442185 MsG0780040049.01.T01:intron 25.0%
!! CTCTACTCATATTTTATTGA+CGG - Chr7:72442085-72442104 None:intergenic 25.0%
!! GAATAAACTTTGGGTTTATT+GGG + Chr7:72445572-72445591 MsG0780040049.01.T01:intron 25.0%
!! GATCTATATGTTTGATTTCA+CGG + Chr7:72443320-72443339 MsG0780040049.01.T01:intron 25.0%
!! GTTACATACGATTCTATTTT+GGG + Chr7:72444785-72444804 MsG0780040049.01.T01:intron 25.0%
!! TATACCCAGATTTTATTGAT+GGG + Chr7:72442167-72442186 MsG0780040049.01.T01:intron 25.0%
!! TATTGGATCTAGATTTGTTT+GGG + Chr7:72443168-72443187 MsG0780040049.01.T01:intron 25.0%
!! TATTGGTAATATCTGTATAG+TGG + Chr7:72446757-72446776 MsG0780040049.01.T01:intron 25.0%
!! TCTACTCATATTTTATTGAC+GGG - Chr7:72442084-72442103 None:intergenic 25.0%
!! TGTTGAACTGACATTATTTT+TGG + Chr7:72442399-72442418 MsG0780040049.01.T01:intron 25.0%
!!! ATGAGAAATTTTTTCACTCA+AGG - Chr7:72441851-72441870 None:intergenic 25.0%
!!! GAGCTTGATCTTTTTAATTT+TGG + Chr7:72444068-72444087 MsG0780040049.01.T01:intron 25.0%
!!! GGCACATCAATTTTTTTTAA+AGG - Chr7:72445699-72445718 None:intergenic 25.0%
!!! TTTAGTTTCTGAAGTTACAT+AGG + Chr7:72445005-72445024 MsG0780040049.01.T01:intron 25.0%
AAAAGGTTATATGAAGCACA+TGG - Chr7:72444357-72444376 None:intergenic 30.0%
AAACAACAGAAGTTTGATCT+TGG + Chr7:72441928-72441947 MsG0780040049.01.T01:intron 30.0%
AAGGTGTGAACAAACAATAT+TGG - Chr7:72446496-72446515 None:intergenic 30.0%
AATGTCCAACGAATATAGAT+CGG + Chr7:72442233-72442252 MsG0780040049.01.T01:intron 30.0%
ACAAACTATCAACAGATCAA+AGG - Chr7:72443121-72443140 None:intergenic 30.0%
ACAACCTATTGTCTAAAAAC+AGG - Chr7:72444693-72444712 None:intergenic 30.0%
ACAACTTCTTAGAAGATCTT+GGG - Chr7:72446597-72446616 None:intergenic 30.0%
ACATACTTTATTGATCCAAG+GGG + Chr7:72445425-72445444 MsG0780040049.01.T01:intron 30.0%
ACCTAATTAGAAGTAGAACA+AGG - Chr7:72446560-72446579 None:intergenic 30.0%
AGGGAATAATGTAGAAGATA+TGG + Chr7:72444860-72444879 MsG0780040049.01.T01:intron 30.0%
ATAATCACCTTTCTAAGTCA+TGG + Chr7:72441962-72441981 MsG0780040049.01.T01:intron 30.0%
ATATGAATACTACTTCCTTG+TGG + Chr7:72446419-72446438 MsG0780040049.01.T01:intron 30.0%
ATGAAAAGCAAAAGCAAACT+TGG - Chr7:72446528-72446547 None:intergenic 30.0%
CAACCTATTGTCTAAAAACA+GGG - Chr7:72444692-72444711 None:intergenic 30.0%
CAAGAATGTTGCAATATACA+AGG + Chr7:72442260-72442279 MsG0780040049.01.T01:intron 30.0%
CAGCACAAAGTAAAATTCAT+AGG - Chr7:72444925-72444944 None:intergenic 30.0%
CATATACCGCATATATATAG+GGG - Chr7:72443923-72443942 None:intergenic 30.0%
CTATATTCGTTGGACATTAT+TGG - Chr7:72442231-72442250 None:intergenic 30.0%
CTCAATTAACAGTTCAATAG+TGG - Chr7:72444388-72444407 None:intergenic 30.0%
GAAAATCGGAAAATTAACCT+TGG - Chr7:72442865-72442884 None:intergenic 30.0%
GACTCATATTAGAATAGAGT+CGG + Chr7:72441647-72441666 MsG0780040049.01.T01:CDS 30.0%
GAGTTACTCATGTTATTGAT+TGG + Chr7:72442102-72442121 MsG0780040049.01.T01:intron 30.0%
GCAAACTTGGAATTATTCAA+AGG - Chr7:72446515-72446534 None:intergenic 30.0%
GGAATGTTTAGATGAATTAC+AGG - Chr7:72446475-72446494 None:intergenic 30.0%
TACAACTTCTTAGAAGATCT+TGG - Chr7:72446598-72446617 None:intergenic 30.0%
TAGAATCGTATGTAACTAAG+GGG - Chr7:72444781-72444800 None:intergenic 30.0%
TATTGTCTAAAAACAGGGTA+AGG - Chr7:72444687-72444706 None:intergenic 30.0%
TCATAAACTTCATCATCATG+TGG - Chr7:72441799-72441818 None:intergenic 30.0%
TCATATACAAAATACCAACG+GGG + Chr7:72443751-72443770 MsG0780040049.01.T01:intron 30.0%
TCCTTGTGGTTATTGTAAAT+GGG + Chr7:72446433-72446452 MsG0780040049.01.T01:intron 30.0%
TCCTTGTTCTACTTCTAATT+AGG + Chr7:72446556-72446575 MsG0780040049.01.T01:intron 30.0%
TGATCTATGAACTTTGTGTT+TGG + Chr7:72444297-72444316 MsG0780040049.01.T01:intron 30.0%
TTATTTGCAGTATAACCAAG+TGG - Chr7:72445741-72445760 None:intergenic 30.0%
TTCCTTGTGGTTATTGTAAA+TGG + Chr7:72446432-72446451 MsG0780040049.01.T01:intron 30.0%
TTGCATCAGCAGATATAAAT+TGG - Chr7:72443664-72443683 None:intergenic 30.0%
! ATACGATTCTAAAAAAAGGG+AGG + Chr7:72444590-72444609 MsG0780040049.01.T01:intron 30.0%
! ATCTTCTAAGAAGTTGTATG+AGG + Chr7:72446600-72446619 MsG0780040049.01.T01:CDS 30.0%
! ATTTTCTCTCACTTTCTGTA+TGG - Chr7:72442014-72442033 None:intergenic 30.0%
! GGAATAAACTTTGGGTTTAT+TGG + Chr7:72445571-72445590 MsG0780040049.01.T01:intron 30.0%
! GTATTGGATCTAGATTTGTT+TGG + Chr7:72443167-72443186 MsG0780040049.01.T01:intron 30.0%
! GTGGATTGATATTTCTACTT+GGG + Chr7:72446056-72446075 MsG0780040049.01.T01:intron 30.0%
! TATGGATTATCTGGATTTAG+AGG + Chr7:72445315-72445334 MsG0780040049.01.T01:intron 30.0%
! TCAATTCATAATTTGGTGAC+TGG + Chr7:72446822-72446841 MsG0780040049.01.T01:intron 30.0%
! TCTGAAATTATAATGTCCTC+TGG - Chr7:72446288-72446307 None:intergenic 30.0%
! TTATTCTTTTTCTCAGCCTT+GGG - Chr7:72444466-72444485 None:intergenic 30.0%
! TTATTTGCTTCATCGGATTT+TGG - Chr7:72445768-72445787 None:intergenic 30.0%
! TTTAAGTCTCTGCATTCTTT+TGG + Chr7:72443615-72443634 MsG0780040049.01.T01:intron 30.0%
! TTTTGGTCCTGTTTGTTTAA+GGG + Chr7:72443830-72443849 MsG0780040049.01.T01:intron 30.0%
!! ACATTATTGGGTTTTAGTGT+CGG - Chr7:72442218-72442237 None:intergenic 30.0%
!! ATTTTGGTCCTGTTTGTTTA+AGG + Chr7:72443829-72443848 MsG0780040049.01.T01:intron 30.0%
!! GAATTTTACTTTGTGCTGTT+TGG + Chr7:72444927-72444946 MsG0780040049.01.T01:intron 30.0%
!! GATCCAAAAAGTTTAGTTCT+GGG + Chr7:72443719-72443738 MsG0780040049.01.T01:intron 30.0%
!! TGAAAGGGTGCTTATAAAAA+GGG - Chr7:72445166-72445185 None:intergenic 30.0%
!!! TAGTGTCGGGTTTTTTTATT+GGG - Chr7:72442204-72442223 None:intergenic 30.0%
!!! TTACCCTGTTTTTAGACAAT+AGG + Chr7:72444686-72444705 MsG0780040049.01.T01:intron 30.0%
!!! TTAGTGTCGGGTTTTTTTAT+TGG - Chr7:72442205-72442224 None:intergenic 30.0%
AAATATTAGCTGGCCACATT+AGG - Chr7:72444003-72444022 None:intergenic 35.0%
AACTAACAGGAAGACTATCT+TGG + Chr7:72445229-72445248 MsG0780040049.01.T01:intron 35.0%
AAGGTAATTATATGACAGGC+TGG - Chr7:72445680-72445699 None:intergenic 35.0%
AATACTTGGATACAATCGCA+AGG - Chr7:72446326-72446345 None:intergenic 35.0%
AATGCATGATTTCGCTAGAA+AGG + Chr7:72445351-72445370 MsG0780040049.01.T01:intron 35.0%
AATTCCTAAATTGATGCCAG+AGG + Chr7:72444118-72444137 MsG0780040049.01.T01:intron 35.0%
ACAAATCATCCAAGACATTG+GGG - Chr7:72444902-72444921 None:intergenic 35.0%
ACAACTCTTCATCTTCGATT+TGG + Chr7:72442611-72442630 MsG0780040049.01.T01:CDS 35.0%
ACCCATTTACAATAACCACA+AGG - Chr7:72446437-72446456 None:intergenic 35.0%
AGAATCGTATGTAACTAAGG+GGG - Chr7:72444780-72444799 None:intergenic 35.0%
AGTTAGATTACTCTGTAGAG+AGG - Chr7:72442679-72442698 None:intergenic 35.0%
AGTTCGTGATCTTTCTAACT+TGG + Chr7:72446257-72446276 MsG0780040049.01.T01:CDS 35.0%
ATAAAATGGCAAACAGGTAC+TGG + Chr7:72442563-72442582 MsG0780040049.01.T01:CDS 35.0%
ATACTTTATTGATCCAAGGG+GGG + Chr7:72445427-72445446 MsG0780040049.01.T01:intron 35.0%
ATCGTAACCATGACTTAGAA+AGG - Chr7:72441972-72441991 None:intergenic 35.0%
ATCTCACTAGTTGTCAATGA+TGG - Chr7:72443545-72443564 None:intergenic 35.0%
ATTAGAGTAATGAAGCGTGA+TGG - Chr7:72442728-72442747 None:intergenic 35.0%
ATTCCTAAATTGATGCCAGA+GGG + Chr7:72444119-72444138 MsG0780040049.01.T01:intron 35.0%
ATTGATGTGCCTTGAATTGT+CGG + Chr7:72445708-72445727 MsG0780040049.01.T01:intron 35.0%
ATTGTTGTCACATGACAGAA+AGG - Chr7:72444737-72444756 None:intergenic 35.0%
ATTTATCCAACTCCTGCTTT+CGG - Chr7:72446918-72446937 None:intergenic 35.0%
CACGCAATGCAAAATAAGTA+GGG - Chr7:72446039-72446058 None:intergenic 35.0%
CAGAAAACCCTTAAACAAAC+AGG - Chr7:72443840-72443859 None:intergenic 35.0%
CAGAAAGTGAGAGAAAATGA+AGG + Chr7:72442016-72442035 MsG0780040049.01.T01:intron 35.0%
CATACTTTATTGATCCAAGG+GGG + Chr7:72445426-72445445 MsG0780040049.01.T01:intron 35.0%
CCTAGTCAAGTATGAATCAA+CGG - Chr7:72443078-72443097 None:intergenic 35.0%
CGTATATTACACCAAATGGT+GGG - Chr7:72444661-72444680 None:intergenic 35.0%
CTAAGCTGAAATAGTAAAGC+AGG - Chr7:72446236-72446255 None:intergenic 35.0%
CTAGTCAAGTATGAATCAAC+GGG - Chr7:72443077-72443096 None:intergenic 35.0%
GAAGTTCCCCTATATATATG+CGG + Chr7:72443914-72443933 MsG0780040049.01.T01:intron 35.0%
GACAAATCATCCAAGACATT+GGG - Chr7:72444903-72444922 None:intergenic 35.0%
GAGAGATGAAAGAGGAAAAT+CGG - Chr7:72442879-72442898 None:intergenic 35.0%
GCAAAATTTGTAATGAGCGA+CGG + Chr7:72443697-72443716 MsG0780040049.01.T01:intron 35.0%
GGATAAATTGATGCAAGATC+AGG + Chr7:72446930-72446949 MsG0780040049.01.T01:CDS 35.0%
GTGAAATTGAGAGATGAAAG+AGG - Chr7:72442887-72442906 None:intergenic 35.0%
GTTGCCCATCAATAAAATCT+GGG - Chr7:72442174-72442193 None:intergenic 35.0%
TAAAATGGCAAACAGGTACT+GGG + Chr7:72442564-72442583 MsG0780040049.01.T01:CDS 35.0%
TAACTTTCTTGCCTGTTGTA+TGG + Chr7:72443584-72443603 MsG0780040049.01.T01:intron 35.0%
TAAGATTGAGGATGATCTCA+AGG + Chr7:72443258-72443277 MsG0780040049.01.T01:CDS 35.0%
TAGAATAGAGTCGGATAAAG+TGG + Chr7:72441656-72441675 MsG0780040049.01.T01:CDS 35.0%
TATGCAGTCTAATGCTTTCA+TGG + Chr7:72442962-72442981 MsG0780040049.01.T01:intron 35.0%
TGAAGGTAAAGTAGAGAGAA+AGG - Chr7:72444531-72444550 None:intergenic 35.0%
TGACCCTAAAATAAATGGGT+CGG - Chr7:72445548-72445567 None:intergenic 35.0%
TGCAAAATAAGTAGGGACTA+TGG - Chr7:72446032-72446051 None:intergenic 35.0%
TGTATCCAAGTATTCACAGA+AGG + Chr7:72446332-72446351 MsG0780040049.01.T01:CDS 35.0%
TGTTGCCCATCAATAAAATC+TGG - Chr7:72442175-72442194 None:intergenic 35.0%
TTACCTTCAGAGTCAAAGAT+GGG + Chr7:72444542-72444561 MsG0780040049.01.T01:intron 35.0%
TTAGCCATGAATGAGAAACA+CGG + Chr7:72445046-72445065 MsG0780040049.01.T01:intron 35.0%
TTATTGCACAACTCAGTCTA+GGG + Chr7:72444414-72444433 MsG0780040049.01.T01:intron 35.0%
TTCTAACTTGGTAAAACCAG+AGG + Chr7:72446269-72446288 MsG0780040049.01.T01:CDS 35.0%
TTCTGCATATGTAACTCTGA+AGG + Chr7:72445807-72445826 MsG0780040049.01.T01:intron 35.0%
TTTACCTTCAGAGTCAAAGA+TGG + Chr7:72444541-72444560 MsG0780040049.01.T01:intron 35.0%
TTTATTGCACAACTCAGTCT+AGG + Chr7:72444413-72444432 MsG0780040049.01.T01:intron 35.0%
TTTCTCATTCATGGCTAAGA+TGG - Chr7:72445044-72445063 None:intergenic 35.0%
! AAGATGAAGAGTTGTTGTTC+TGG - Chr7:72442606-72442625 None:intergenic 35.0%
! ATTTCACAATGATGGAGTGA+TGG + Chr7:72445831-72445850 MsG0780040049.01.T01:intron 35.0%
! CGTGGATTGATATTTCTACT+TGG + Chr7:72446055-72446074 MsG0780040049.01.T01:intron 35.0%
! CTTATTCTTTTTCTCAGCCT+TGG - Chr7:72444467-72444486 None:intergenic 35.0%
! GGATCCAAAAAGTTTAGTTC+TGG + Chr7:72443718-72443737 MsG0780040049.01.T01:intron 35.0%
! GGGGCACTAAATTTATGATA+TGG + Chr7:72443770-72443789 MsG0780040049.01.T01:intron 35.0%
! TCAAGGAAACAGTAAGTTGA+AGG - Chr7:72441834-72441853 None:intergenic 35.0%
! TGAAACATTGACTAGCTATG+TGG + Chr7:72446371-72446390 MsG0780040049.01.T01:CDS 35.0%
! TGGAGATATTTTGCTGCAAT+TGG - Chr7:72442639-72442658 None:intergenic 35.0%
! TGTCCCAGAACTAAACTTTT+TGG - Chr7:72443725-72443744 None:intergenic 35.0%
! TTAGACAATAGGTTGTTTCC+AGG + Chr7:72444697-72444716 MsG0780040049.01.T01:intron 35.0%
! TTTAGAGCTAGGGGATTAAA+TGG - Chr7:72445507-72445526 None:intergenic 35.0%
! TTTGATTTCACGGATGTGAT+GGG + Chr7:72443330-72443349 MsG0780040049.01.T01:intron 35.0%
!! ATTTGGAGCTCTAAAGCATA+AGG - Chr7:72444260-72444279 None:intergenic 35.0%
!! CATTATTGGGTTTTAGTGTC+GGG - Chr7:72442217-72442236 None:intergenic 35.0%
!! CTGAAGGTATTTCACAATGA+TGG + Chr7:72445823-72445842 MsG0780040049.01.T01:intron 35.0%
!! GTGAAAGGGTGCTTATAAAA+AGG - Chr7:72445167-72445186 None:intergenic 35.0%
!! TTTGGAGCTCTAAAGCATAA+GGG - Chr7:72444259-72444278 None:intergenic 35.0%
!!! AAGGGGTGCTTTTAAATGAA+CGG + Chr7:72445195-72445214 MsG0780040049.01.T01:intron 35.0%
!!! AATTTTTGGTTAGAAGACCC+CGG + Chr7:72444809-72444828 MsG0780040049.01.T01:intron 35.0%
!!! CATTTTTTTCCCAACATGAG+AGG - Chr7:72445460-72445479 None:intergenic 35.0%
!!! GCTGATTCTGGTTTTTGTAT+TGG + Chr7:72443151-72443170 MsG0780040049.01.T01:intron 35.0%
!!! TACCCGACCCATTTATTTTA+GGG + Chr7:72445542-72445561 MsG0780040049.01.T01:intron 35.0%
!!! TTGGCTTTTCTAAAGTGAAG+AGG + Chr7:72444150-72444169 MsG0780040049.01.T01:intron 35.0%
!!! TTTTGACAGCTTTAGAGCTA+GGG - Chr7:72445517-72445536 None:intergenic 35.0%
AAACCAGTTAGCCATACAAC+AGG - Chr7:72443598-72443617 None:intergenic 40.0%
AAAGGTGAATCCTTCACCAT+AGG - Chr7:72444513-72444532 None:intergenic 40.0%
AACATTCCTAATCTCCGTGT+TGG + Chr7:72442801-72442820 MsG0780040049.01.T01:CDS 40.0%
AACGTTTAGAAACAGATGGG+TGG + Chr7:72445270-72445289 MsG0780040049.01.T01:intron 40.0%
ACCCTTTCACACTCACTAAA+GGG + Chr7:72445177-72445196 MsG0780040049.01.T01:intron 40.0%
AGAACTAGTGCACGTGAAAA+AGG + Chr7:72446679-72446698 MsG0780040049.01.T01:CDS 40.0%
AGAGCTGATACATCAGTTTG+TGG + Chr7:72444046-72444065 MsG0780040049.01.T01:intron 40.0%
AGCTAGGGGATTAAATGGTT+GGG - Chr7:72445502-72445521 None:intergenic 40.0%
ATACAGTCCAGAAACACATG+AGG + Chr7:72446891-72446910 MsG0780040049.01.T01:CDS 40.0%
CAAGATCAGGAAAGTTTGAG+GGG + Chr7:72446943-72446962 MsG0780040049.01.T01:CDS 40.0%
CAGTCTAATGCTTTCATGGA+AGG + Chr7:72442966-72442985 MsG0780040049.01.T01:intron 40.0%
CCAAGTATTCACAGAAGGAT+TGG + Chr7:72446337-72446356 MsG0780040049.01.T01:CDS 40.0%
CCAATCCTTCTGTGAATACT+TGG - Chr7:72446340-72446359 None:intergenic 40.0%
CCACGCAATGCAAAATAAGT+AGG - Chr7:72446040-72446059 None:intergenic 40.0%
CCATCAACAATCTCCTTCAA+AGG - Chr7:72443220-72443239 None:intergenic 40.0%
CGGCTGACCCTAAAATAAAT+GGG - Chr7:72445552-72445571 None:intergenic 40.0%
CTCTTAAGAGGGACAAATTG+AGG + Chr7:72444190-72444209 MsG0780040049.01.T01:intron 40.0%
GAAAATGTGTCTTTCATGCC+AGG + Chr7:72446083-72446102 MsG0780040049.01.T01:intron 40.0%
GAACTAGTGCACGTGAAAAA+GGG + Chr7:72446680-72446699 MsG0780040049.01.T01:CDS 40.0%
GACCCTAAAATAAATGGGTC+GGG - Chr7:72445547-72445566 None:intergenic 40.0%
GCAAGATCAGGAAAGTTTGA+GGG + Chr7:72446942-72446961 MsG0780040049.01.T01:CDS 40.0%
GCATAATACCTCTCCATAAC+TGG - Chr7:72446992-72447011 None:intergenic 40.0%
GCGTATATTACACCAAATGG+TGG - Chr7:72444662-72444681 None:intergenic 40.0%
GCTATAAACCGAAAGCAAAC+TGG + Chr7:72446147-72446166 MsG0780040049.01.T01:CDS 40.0%
GCTGCGTATATTACACCAAA+TGG - Chr7:72444665-72444684 None:intergenic 40.0%
GGACAAATCATCCAAGACAT+TGG - Chr7:72444904-72444923 None:intergenic 40.0%
GTCAACCGATCTATATTCGT+TGG - Chr7:72442241-72442260 None:intergenic 40.0%
GTGGGTATAGTTAACTGAGT+TGG - Chr7:72442130-72442149 None:intergenic 40.0%
TAAACCGAAAGCAAACTGGA+AGG + Chr7:72446151-72446170 MsG0780040049.01.T01:CDS 40.0%
TACAGTCCAGAAACACATGA+GGG + Chr7:72446892-72446911 MsG0780040049.01.T01:CDS 40.0%
TAGTCAAGTCGCTAAGATTG+AGG + Chr7:72443246-72443265 MsG0780040049.01.T01:CDS 40.0%
TCACATGACAGAAAGGTCAT+GGG - Chr7:72444730-72444749 None:intergenic 40.0%
TCATAAATTTAGTGCCCCGT+TGG - Chr7:72443768-72443787 None:intergenic 40.0%
TCATTCATGGCTAAGATGGA+TGG - Chr7:72445040-72445059 None:intergenic 40.0%
TGAAGCACATGGATCAAAGT+AGG - Chr7:72444346-72444365 None:intergenic 40.0%
TGCAAGATCAGGAAAGTTTG+AGG + Chr7:72446941-72446960 MsG0780040049.01.T01:CDS 40.0%
TGTAACACTCTTCAATCGTG+TGG + Chr7:72446645-72446664 MsG0780040049.01.T01:CDS 40.0%
TTCCTAAATTGATGCCAGAG+GGG + Chr7:72444120-72444139 MsG0780040049.01.T01:intron 40.0%
TTTGCCGTGTTTCTCATTCA+TGG - Chr7:72445053-72445072 None:intergenic 40.0%
! ACAATTTTTCCGTTGAGCCA+AGG + Chr7:72444752-72444771 MsG0780040049.01.T01:intron 40.0%
! AGGGTGCTTATAAAAAGGGA+CGG - Chr7:72445162-72445181 None:intergenic 40.0%
! ATTCTAAAAAAAGGGAGGCC+CGG + Chr7:72444595-72444614 MsG0780040049.01.T01:intron 40.0%
! CAATTTTTCCGTTGAGCCAA+GGG + Chr7:72444753-72444772 MsG0780040049.01.T01:intron 40.0%
! CCTTTGAAGGAGATTGTTGA+TGG + Chr7:72443217-72443236 MsG0780040049.01.T01:CDS 40.0%
! GAGAATCTAGAGTTCCAACA+CGG - Chr7:72442818-72442837 None:intergenic 40.0%
! GCTATAGTGCTATTGCATAG+CGG + Chr7:72443427-72443446 MsG0780040049.01.T01:intron 40.0%
! GGTGCTTTTAAATGAACGGA+GGG + Chr7:72445199-72445218 MsG0780040049.01.T01:intron 40.0%
! GTTTGATTTCACGGATGTGA+TGG + Chr7:72443329-72443348 MsG0780040049.01.T01:intron 40.0%
! TGAAGAGTTGTTGTTCTGGA+CGG - Chr7:72442602-72442621 None:intergenic 40.0%
! TGATGGATCGCAGAAAATAG+CGG - Chr7:72443528-72443547 None:intergenic 40.0%
! TTATAGCGTTGAGCTGACTT+CGG - Chr7:72446134-72446153 None:intergenic 40.0%
!! CCGTTGATTCATACTTGACT+AGG + Chr7:72443075-72443094 MsG0780040049.01.T01:CDS 40.0%
!! CTACCCGACCCATTTATTTT+AGG + Chr7:72445541-72445560 MsG0780040049.01.T01:intron 40.0%
!! TTTGACAGCTTTAGAGCTAG+GGG - Chr7:72445516-72445535 None:intergenic 40.0%
!!! CCATTTATTTTAGGGTCAGC+CGG + Chr7:72445550-72445569 MsG0780040049.01.T01:intron 40.0%
!!! CCTACTTATTTTGCATTGCG+TGG + Chr7:72446037-72446056 MsG0780040049.01.T01:intron 40.0%
!!! GTTTTGACAGCTTTAGAGCT+AGG - Chr7:72445518-72445537 None:intergenic 40.0%
!!! GTTTTTGTTTGCGCTGATTC+TGG + Chr7:72443139-72443158 MsG0780040049.01.T01:intron 40.0%
ACAGTTCAATAGTGGCAGCA+CGG - Chr7:72444380-72444399 None:intergenic 45.0%
ACCCCTTTAGTGAGTGTGAA+AGG - Chr7:72445182-72445201 None:intergenic 45.0%
ACTAAAGCTCCCTCATATGC+AGG + Chr7:72444621-72444640 MsG0780040049.01.T01:intron 45.0%
ACTTGGATACAATCGCAAGG+AGG - Chr7:72446323-72446342 None:intergenic 45.0%
AGAGTTCCAACACGGAGATT+AGG - Chr7:72442810-72442829 None:intergenic 45.0%
AGATCAATACTCTGCTCCCT+GGG - Chr7:72444283-72444302 None:intergenic 45.0%
AGATGGGGTAGAAGTTGTTG+AGG + Chr7:72444840-72444859 MsG0780040049.01.T01:intron 45.0%
AGCCATAAGCTTATCTCCCA+AGG + Chr7:72444447-72444466 MsG0780040049.01.T01:intron 45.0%
AGCCTTGGGAGATAAGCTTA+TGG - Chr7:72444452-72444471 None:intergenic 45.0%
ATCAACGGGAACTCCATCAA+CGG - Chr7:72443063-72443082 None:intergenic 45.0%
CAACAACTTCTACCCCATCT+TGG - Chr7:72444840-72444859 None:intergenic 45.0%
CACCCTTTCACACTCACTAA+AGG + Chr7:72445176-72445195 MsG0780040049.01.T01:intron 45.0%
CCAATTCACACCTATGGTGA+AGG + Chr7:72444500-72444519 MsG0780040049.01.T01:intron 45.0%
CCCCTTTAGTGAGTGTGAAA+GGG - Chr7:72445181-72445200 None:intergenic 45.0%
CCCTTTCACACTCACTAAAG+GGG + Chr7:72445178-72445197 MsG0780040049.01.T01:intron 45.0%
CCGGCTGACCCTAAAATAAA+TGG - Chr7:72445553-72445572 None:intergenic 45.0%
CCTTCACCATAGGTGTGAAT+TGG - Chr7:72444503-72444522 None:intergenic 45.0%
CGAAAGCAAACTGGAAGGTT+CGG + Chr7:72446156-72446175 MsG0780040049.01.T01:intron 45.0%
CTAAAGCTCCCTCATATGCA+GGG + Chr7:72444622-72444641 MsG0780040049.01.T01:intron 45.0%
CTTGGATACAATCGCAAGGA+GGG - Chr7:72446322-72446341 None:intergenic 45.0%
GAGCTAGGGGATTAAATGGT+TGG - Chr7:72445503-72445522 None:intergenic 45.0%
GAGTGCAAATGCTCCTAATG+TGG + Chr7:72443987-72444006 MsG0780040049.01.T01:intron 45.0%
GATGGGGTAGAAGTTGTTGA+GGG + Chr7:72444841-72444860 MsG0780040049.01.T01:intron 45.0%
GGTCAGCCGGAATAAACTTT+GGG + Chr7:72445563-72445582 MsG0780040049.01.T01:intron 45.0%
GTCACATGACAGAAAGGTCA+TGG - Chr7:72444731-72444750 None:intergenic 45.0%
GTGCTTATAAAAAGGGACGG+AGG - Chr7:72445159-72445178 None:intergenic 45.0%
TAGATCAATACTCTGCTCCC+TGG - Chr7:72444284-72444303 None:intergenic 45.0%
TATACTCGGAAACACGAACC+TGG - Chr7:72446104-72446123 None:intergenic 45.0%
TCCTTCAAAGGCGACATAGT+CGG - Chr7:72443208-72443227 None:intergenic 45.0%
TGAAGCCAACATTGCAGATG+AGG - Chr7:72444954-72444973 None:intergenic 45.0%
TTCCCCTCTGGCATCAATTT+AGG - Chr7:72444125-72444144 None:intergenic 45.0%
TTGCCTGTTGTATGGCTAAC+TGG + Chr7:72443592-72443611 MsG0780040049.01.T01:intron 45.0%
TTGGTCCTCATCTGCAATGT+TGG + Chr7:72444946-72444965 MsG0780040049.01.T01:intron 45.0%
! AAGAGTTGTTGTTCTGGACG+GGG - Chr7:72442600-72442619 None:intergenic 45.0%
! AAGGTGTTTCGAGCAAGATC+AGG + Chr7:72442985-72443004 MsG0780040049.01.T01:CDS 45.0%
! CGAACCTTCCAGTTTGCTTT+CGG - Chr7:72446158-72446177 None:intergenic 45.0%
! GAAGAGTTGTTGTTCTGGAC+GGG - Chr7:72442601-72442620 None:intergenic 45.0%
! GCGACTCACTTCTTTTCATG+TGG - Chr7:72441689-72441708 None:intergenic 45.0%
! GGGTGCTTTTAAATGAACGG+AGG + Chr7:72445198-72445217 MsG0780040049.01.T01:intron 45.0%
! TCTTGTTGTCCCCAATGTCT+TGG + Chr7:72444890-72444909 MsG0780040049.01.T01:intron 45.0%
!! AGGAGTATCGAAGGAATGCT+TGG - Chr7:72442659-72442678 None:intergenic 45.0%
!! CAATGGTGCTATGCCAGTTA+TGG + Chr7:72446976-72446995 MsG0780040049.01.T01:CDS 45.0%
!! CTTTAGAGCTCCAAATCCCA+GGG + Chr7:72444264-72444283 MsG0780040049.01.T01:intron 45.0%
!! GGAGGGAGTACTTAACTAAC+AGG + Chr7:72445216-72445235 MsG0780040049.01.T01:intron 45.0%
!! TCTGTAGAGAGGAGTATCGA+AGG - Chr7:72442668-72442687 None:intergenic 45.0%
AAGCCAAGATTGTTCCCCTC+TGG - Chr7:72444137-72444156 None:intergenic 50.0%
AAGGTCATGGGTTCAAGTCC+TGG - Chr7:72444718-72444737 None:intergenic 50.0%
ATACTCTGCTCCCTGGGATT+TGG - Chr7:72444277-72444296 None:intergenic 50.0%
ATGCCAGAGGGGAACAATCT+TGG + Chr7:72444131-72444150 MsG0780040049.01.T01:intron 50.0%
ATGTAACTAAGGGGGACCCT+TGG - Chr7:72444772-72444791 None:intergenic 50.0%
CAATAGTGGCAGCACGGAAA+AGG - Chr7:72444374-72444393 None:intergenic 50.0%
CACCATAGGTGTGAATTGGC+AGG - Chr7:72444499-72444518 None:intergenic 50.0%
CACCTGCCAATTCACACCTA+TGG + Chr7:72444494-72444513 MsG0780040049.01.T01:intron 50.0%
CAGGCGTCAGATTGAAGAAC+TGG + Chr7:72443004-72443023 MsG0780040049.01.T01:CDS 50.0%
CATAGGTGTGAATTGGCAGG+TGG - Chr7:72444496-72444515 None:intergenic 50.0%
CGACCCATCTTTGACTCTGA+AGG - Chr7:72444548-72444567 None:intergenic 50.0%
CTACCCCATCTTGGACAAAC+CGG - Chr7:72444831-72444850 None:intergenic 50.0%
CTTGGTGAGATCATCGCTGA+GGG - Chr7:72442847-72442866 None:intergenic 50.0%
GAAGAACTGGAGCGAGTTTC+CGG + Chr7:72443017-72443036 MsG0780040049.01.T01:CDS 50.0%
GAGACCAGCAGTGTTAACAC+CGG - Chr7:72443039-72443058 None:intergenic 50.0%
GCAGTATAACCAAGTGGACG+TGG - Chr7:72445735-72445754 None:intergenic 50.0%
GGAGTGGATCCTCTCATGTT+GGG + Chr7:72445448-72445467 MsG0780040049.01.T01:intron 50.0%
GGGTCAGCCGGAATAAACTT+TGG + Chr7:72445562-72445581 MsG0780040049.01.T01:intron 50.0%
GTGCTATGCCAGTTATGGAG+AGG + Chr7:72446981-72447000 MsG0780040049.01.T01:CDS 50.0%
TACCCCATCTTGGACAAACC+GGG - Chr7:72444830-72444849 None:intergenic 50.0%
TCATATGCAGGGTCTGGGAA+GGG + Chr7:72444633-72444652 MsG0780040049.01.T01:intron 50.0%
TCCGACTATGTCGCCTTTGA+AGG + Chr7:72443204-72443223 MsG0780040049.01.T01:CDS 50.0%
TTATTGATCCAAGGGGGGAG+TGG + Chr7:72445432-72445451 MsG0780040049.01.T01:intron 50.0%
TTCCCAGACCCTGCATATGA+GGG - Chr7:72444633-72444652 None:intergenic 50.0%
TTTCGGCCCTCATGTGTTTC+TGG - Chr7:72446901-72446920 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - Chr7:72444617-72444636 None:intergenic 50.0%
! GTTTCCGGTGTTAACACTGC+TGG + Chr7:72443032-72443051 MsG0780040049.01.T01:CDS 50.0%
!! AATGGCAAACAGGTACTGGG+TGG + Chr7:72442567-72442586 MsG0780040049.01.T01:CDS 50.0%
!! CTGCAATGTTGGCTTCAGCT+TGG + Chr7:72444957-72444976 MsG0780040049.01.T01:intron 50.0%
!! GCTTTAGAGCTCCAAATCCC+AGG + Chr7:72444263-72444282 MsG0780040049.01.T01:intron 50.0%
AACACATGAGGGCCGAAAGC+AGG + Chr7:72446903-72446922 MsG0780040049.01.T01:CDS 55.0%
ACCCCATCTTGGACAAACCG+GGG - Chr7:72444829-72444848 None:intergenic 55.0%
ATTGTCGGACCACGTCCACT+TGG + Chr7:72445723-72445742 MsG0780040049.01.T01:intron 55.0%
CATATGCAGGGTCTGGGAAG+GGG + Chr7:72444634-72444653 MsG0780040049.01.T01:intron 55.0%
CCAAGCCCACAGTCTGCAAA+TGG - Chr7:72445653-72445672 None:intergenic 55.0%
CCATTTGCAGACTGTGGGCT+TGG + Chr7:72445650-72445669 MsG0780040049.01.T01:intron 55.0%
CCTCAGCGATGATCTCACCA+AGG + Chr7:72442845-72442864 MsG0780040049.01.T01:CDS 55.0%
CCTTGGTGAGATCATCGCTG+AGG - Chr7:72442848-72442867 None:intergenic 55.0%
CTCATATGCAGGGTCTGGGA+AGG + Chr7:72444632-72444651 MsG0780040049.01.T01:intron 55.0%
CTCCCTCATATGCAGGGTCT+GGG + Chr7:72444628-72444647 MsG0780040049.01.T01:intron 55.0%
CTTCCCAGACCCTGCATATG+AGG - Chr7:72444634-72444653 None:intergenic 55.0%
GGACGTGGTCCGACAATTCA+AGG - Chr7:72445720-72445739 None:intergenic 55.0%
GGGAGTGGATCCTCTCATGT+TGG + Chr7:72445447-72445466 MsG0780040049.01.T01:intron 55.0%
TGAGGGGTTCTCTGCTGCAA+TGG + Chr7:72446959-72446978 MsG0780040049.01.T01:CDS 55.0%
TTTGCAGACTGTGGGCTTGG+CGG + Chr7:72445653-72445672 MsG0780040049.01.T01:intron 55.0%
! ACCCCGGTTTGTCCAAGATG+GGG + Chr7:72444825-72444844 MsG0780040049.01.T01:intron 55.0%
! ACTGCTGGTCTCACCGTTGA+TGG + Chr7:72443047-72443066 MsG0780040049.01.T01:CDS 55.0%
! AGACCCCGGTTTGTCCAAGA+TGG + Chr7:72444823-72444842 MsG0780040049.01.T01:intron 55.0%
! GACCCCGGTTTGTCCAAGAT+GGG + Chr7:72444824-72444843 MsG0780040049.01.T01:intron 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - Chr7:72444616-72444635 None:intergenic 55.0%
AAGGGGGACCCTTGGCTCAA+CGG - Chr7:72444764-72444783 None:intergenic 60.0%
CCCACAGTCTGCAAATGGCC+GGG - Chr7:72445648-72445667 None:intergenic 60.0%
CCCGGCCATTTGCAGACTGT+GGG + Chr7:72445645-72445664 MsG0780040049.01.T01:intron 60.0%
GCCCACAGTCTGCAAATGGC+CGG - Chr7:72445649-72445668 None:intergenic 60.0%
GCTCCCTCATATGCAGGGTC+TGG + Chr7:72444627-72444646 MsG0780040049.01.T01:intron 60.0%
TGAGGGCCGAAAGCAGGAGT+TGG + Chr7:72446909-72446928 MsG0780040049.01.T01:CDS 60.0%
TGGGAAGGGGTCCCACCATT+TGG + Chr7:72444647-72444666 MsG0780040049.01.T01:intron 60.0%
TTGCAGACTGTGGGCTTGGC+GGG + Chr7:72445654-72445673 MsG0780040049.01.T01:intron 60.0%
GAGAGGATCCACTCCCCCCT+TGG - Chr7:72445443-72445462 None:intergenic 65.0%
GCCCGGCCATTTGCAGACTG+TGG + Chr7:72445644-72445663 MsG0780040049.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 72441633 72447041 72441633 ID=MsG0780040049.01;Name=MsG0780040049.01
Chr7 mRNA 72441633 72447041 72441633 ID=MsG0780040049.01.T01;Parent=MsG0780040049.01;Name=MsG0780040049.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.87|0.66|0.88|0.75|0.77|9|0|341
Chr7 exon 72441633 72441699 72441633 ID=MsG0780040049.01.T01:exon:9811;Parent=MsG0780040049.01.T01
Chr7 exon 72442518 72442687 72442518 ID=MsG0780040049.01.T01:exon:9812;Parent=MsG0780040049.01.T01
Chr7 exon 72442798 72442866 72442798 ID=MsG0780040049.01.T01:exon:9813;Parent=MsG0780040049.01.T01
Chr7 exon 72442969 72443096 72442969 ID=MsG0780040049.01.T01:exon:9814;Parent=MsG0780040049.01.T01
Chr7 exon 72443180 72443279 72443180 ID=MsG0780040049.01.T01:exon:9815;Parent=MsG0780040049.01.T01
Chr7 exon 72446105 72446172 72446105 ID=MsG0780040049.01.T01:exon:9816;Parent=MsG0780040049.01.T01
Chr7 exon 72446251 72446392 72446251 ID=MsG0780040049.01.T01:exon:9817;Parent=MsG0780040049.01.T01
Chr7 exon 72446592 72446708 72446592 ID=MsG0780040049.01.T01:exon:9818;Parent=MsG0780040049.01.T01
Chr7 exon 72446877 72447041 72446877 ID=MsG0780040049.01.T01:exon:9819;Parent=MsG0780040049.01.T01
Chr7 CDS 72441633 72441699 72441633 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72442518 72442687 72442518 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72442798 72442866 72442798 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72442969 72443096 72442969 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72443180 72443279 72443180 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72446105 72446172 72446105 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72446251 72446392 72446251 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72446592 72446708 72446592 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Chr7 CDS 72446877 72447041 72446877 ID=MsG0780040049.01.T01:cds;Parent=MsG0780040049.01.T01
Gene Sequence

>MsG0780040049.01.T01

ATGAACGCTCGAACGACTCATATTAGAATAGAGTCGGATAAAGTGGTGAGAAACCACATGAAAAGAATGATAATAAACACAATCATCATCAGAAACACAACACTCGTAAAAAATAAAATGGCAAACAGGTACTGGGTGGTGTCTCTCCCCGTCCAGAACAACAACTCTTCATCTTCGATTTGGAACCAATTGCAGCAAAATATCTCCAAGCATTCCTTCGATACTCCTCTCTACAGATTCAACATTCCTAATCTCCGTGTTGGAACTCTAGATTCTCTTCTCTCCCTCAGCGATGATCTCACCAAGTCTAATGCTTTCATGGAAGGTGTTTCGAGCAAGATCAGGCGTCAGATTGAAGAACTGGAGCGAGTTTCCGGTGTTAACACTGCTGGTCTCACCGTTGATGGAGTTCCCGTTGATTCATACTTGACTAGATTTGTTTGGGACGATGCTAAGTATCCGACTATGTCGCCTTTGAAGGAGATTGTTGATGGCATTCATAGTCAAGTCGCTAAGATTGAGGATGATCTCAAGGTTCGTGTTTCCGAGTATAATAATATCCGAAGTCAGCTCAACGCTATAAACCGAAAGCAAACTGGAAGCTTAGCAGTTCGTGATCTTTCTAACTTGGTAAAACCAGAGGACATTATAATTTCAGAACATTTAACTACCCTCCTTGCGATTGTATCCAAGTATTCACAGAAGGATTGGCTTGAAAGCTATGAAACATTGACTAGCTATGTGGTCCCAAGATCTTCTAAGAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTAACACTCTTCAATCGTGTGGCAGACAATTTTAGAACTAGTGCACGTGAAAAAGGGTTCCAAATTCGTGATTTTGAATACAGTCCAGAAACACATGAGGGCCGAAAGCAGGAGTTGGATAAATTGATGCAAGATCAGGAAAGTTTGAGGGGTTCTCTGCTGCAATGGTGCTATGCCAGTTATGGAGAGGTATTATGCACTTGCTCATTACTTCATTTAATTTTGTAG
Protein sequence

>MsG0780040049.01.T01

MNARTTHIRIESDKVVRNHMKRMIINTIIIRNTTLVKNKMANRYWVVSLPVQNNNSSSSIWNQLQQNISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLTKSNAFMEGVSSKIRRQIEELERVSGVNTAGLTVDGVPVDSYLTRFVWDDAKYPTMSPLKEIVDGIHSQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIIISEHLTTLLAIVSKYSQKDWLESYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHEGRKQELDKLMQDQESLRGSLLQWCYASYGEVLCTCSLLHLIL*