AlfalfaGEDB | MsG0080048374.01

M. sativa cultivar ZhongmuNo.1 / MsG0080048374.01

KEGG: K17263
GO: GO:0005488
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048374.01.T01	KEH32746.1	95.405	370	1	2	44	397	1	370	0	702

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048374.01.T01	Q8L5Y6	71.505	372	87	4	44	397	1	371	6.54E-168	506

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048374.01.T01	A0A072UTS6	95.405	370	1	2	44	397	1	370	0.0	702

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047785.01	MsG0080048374.01	0.805842	1.098042e-49	5.869994e-47
MsG0080047793.01	MsG0080048374.01	0.866556	2.616017e-65	8.854569e-62
MsG0080048374.01	MsG0080048602.01	0.835927	1.261948e-56	1.565932e-53
MsG0080048374.01	MsG0180000146.01	0.830085	3.580846e-55	3.734222e-52
MsG0080048374.01	MsG0180003303.01	0.802021	6.836070e-49	3.313204e-46
MsG0080048374.01	MsG0180003799.01	0.804277	2.334051e-49	1.198445e-46
MsG0080048374.01	MsG0180003928.01	0.807721	4.401100e-50	2.469477e-47
MsG0080048374.01	MsG0180003937.01	0.805117	1.558643e-49	8.178285e-47
MsG0080048374.01	MsG0180004014.01	0.805243	1.466812e-49	7.721303e-47
MsG0080048374.01	MsG0180004383.01	0.870054	1.949016e-66	7.478029e-63
MsG0080048374.01	MsG0180004872.01	0.812599	3.909028e-51	2.495987e-48
MsG0080048374.01	MsG0180005026.01	0.810008	1.426693e-50	8.504061e-48
MsG0080048374.01	MsG0180005985.01	0.849085	4.054054e-60	7.598474e-57
MsG0080048374.01	MsG0280006304.01	0.933156	2.883441e-95	2.016503e-90
MsG0080048374.01	MsG0280006351.01	0.834742	2.514246e-56	3.010548e-53
MsG0080048374.01	MsG0280006719.01	0.803277	3.764933e-49	1.884107e-46
MsG0080048374.01	MsG0280007726.01	0.837929	3.888107e-57	5.127491e-54
MsG0080048374.01	MsG0280007830.01	0.801865	7.360292e-49	3.553293e-46
MsG0080048374.01	MsG0280009386.01	0.852165	5.520969e-61	1.143642e-57
MsG0080048374.01	MsG0280010563.01	0.849880	2.433396e-60	4.680380e-57
MsG0080048374.01	MsG0280010866.01	0.833461	5.263759e-56	6.065784e-53
MsG0080048374.01	MsG0280010932.01	0.819707	1.008058e-52	7.815924e-50
MsG0080048374.01	MsG0280011075.01	0.845915	3.015586e-59	5.103810e-56
MsG0080048374.01	MsG0280011085.01	0.846029	2.807283e-59	4.768678e-56
MsG0080048374.01	MsG0380015495.01	0.838088	3.539339e-57	4.689865e-54
MsG0080048374.01	MsG0380016589.01	0.902818	6.570072e-79	9.472590e-75
MsG0080048374.01	MsG0380017045.01	0.834732	2.528964e-56	3.027206e-53
MsG0080048374.01	MsG0380017374.01	0.834837	2.378579e-56	2.856695e-53
MsG0080048374.01	MsG0380017430.01	0.802282	6.041925e-49	2.947933e-46
MsG0080048374.01	MsG0480018256.01	0.803826	2.896562e-49	1.470171e-46
MsG0080048374.01	MsG0480018643.01	0.866330	3.085208e-65	1.035932e-61
MsG0080048374.01	MsG0480019395.01	0.821381	4.161077e-53	3.379795e-50
MsG0080048374.01	MsG0480021216.01	0.850743	1.393858e-60	2.757655e-57
MsG0080048374.01	MsG0480022317.01	0.895535	8.742907e-76	9.109350e-72
MsG0080048374.01	MsG0480022398.01	0.869744	2.460414e-66	9.333086e-63
MsG0080048374.01	MsG0480022719.01	0.817155	3.819232e-52	2.759870e-49
MsG0080048374.01	MsG0480022819.01	0.833213	6.069301e-56	6.942835e-53
MsG0080048374.01	MsG0480023609.01	0.820418	6.932566e-53	5.482634e-50
MsG0080048374.01	MsG0580024770.01	0.834405	3.054346e-56	3.621244e-53
MsG0080048374.01	MsG0580024959.01	0.857838	1.242815e-62	3.108778e-59
MsG0080048374.01	MsG0580025013.01	0.827259	1.726712e-54	1.658421e-51
MsG0080048374.01	MsG0580025128.01	0.894512	2.300902e-75	2.294313e-71
MsG0080048374.01	MsG0580029007.01	0.864424	1.227803e-64	3.853459e-61
MsG0080048374.01	MsG0580029036.01	0.823765	1.161045e-53	1.009125e-50
MsG0080048374.01	MsG0580029214.01	0.831010	2.126977e-55	2.279036e-52
MsG0080048374.01	MsG0680030353.01	0.804518	2.078347e-49	1.073762e-46
MsG0080048374.01	MsG0680035681.01	0.826589	2.496770e-54	2.351469e-51
MsG0080048374.01	MsG0680035874.01	0.847437	1.156963e-59	2.056371e-56
MsG0080048374.01	MsG0780035936.01	0.876333	1.518227e-68	7.331579e-65
MsG0080048374.01	MsG0780036017.01	0.805095	1.574805e-49	8.258423e-47
MsG0080048374.01	MsG0780037301.01	0.804736	1.871769e-49	9.726226e-47
MsG0080048374.01	MsG0780037876.01	0.823742	1.176128e-53	1.021542e-50
MsG0080048374.01	MsG0780037920.01	0.823714	1.193835e-53	1.036141e-50
MsG0080048374.01	MsG0780039497.01	0.844476	7.384340e-59	1.193549e-55
MsG0080048374.01	MsG0780039530.01	0.924150	1.033657e-89	4.301331e-85
MsG0080048374.01	MsG0780040049.01	0.859195	4.891540e-63	1.281125e-59
MsG0080048374.01	MsG0780040058.01	0.843621	1.252146e-58	1.970589e-55
MsG0080048374.01	MsG0780040687.01	0.822066	2.889592e-53	2.392835e-50
MsG0080048374.01	MsG0780041371.01	0.835334	1.782197e-56	2.172836e-53
MsG0080048374.01	MsG0780041598.01	0.843440	1.399727e-58	2.190192e-55
MsG0080048374.01	MsG0880042783.01	0.800580	1.348236e-48	6.300457e-46
MsG0080048374.01	MsG0880042838.01	0.878651	2.362778e-69	1.243647e-65
MsG0080048374.01	MsG0880042983.01	0.806738	7.111286e-50	3.889554e-47
MsG0080048374.01	MsG0880045841.01	0.900315	8.282366e-78	1.065147e-73
MsG0080048374.01	MsG0880046100.01	0.854355	1.301220e-61	2.897941e-58
MsG0080048374.01	MsG0880046206.01	0.802100	6.584040e-49	3.197509e-46
MsG0080048374.01	MsG0880046990.01	0.804158	2.470335e-49	1.264591e-46
MsG0080048374.01	MsG0880047289.01	0.813828	2.100235e-51	1.386112e-48
MsG0080048374.01	MsG0880047293.01	0.827150	1.834250e-54	1.755905e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048374.01.T01	MTR_4g134620	95.405	370	1	2	44	397	1	370	0.0	702
MsG0080048374.01.T01	MTR_4g134620	95.405	370	1	2	44	397	1	370	0.0	702

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048374.01.T01	AT2G02560	71.892	370	87	3	44	397	1	369	6.94e-171	511
MsG0080048374.01.T01	AT2G02560	71.505	372	87	4	44	397	1	371	6.67e-169	506

Find 89 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCGACGTCCTTCATAAATT+TGG	0.119521	contig28end:-4486	MsG0080048374.01.T01:CDS
GATGCTGCTGGTGATGTTTC+TGG	0.157291	contig28end:-4877	MsG0080048374.01.T01:CDS
CTCTGTGACAAAATACTTAA+TGG	0.206476	contig28end:-4781	MsG0080048374.01.T01:CDS
CCAACCTCCCGCGACAAAAT+AGG	0.286921	contig28end:+6255	None:intergenic
TCCATGTTGTCAGTAAAGTT+TGG	0.316497	contig28end:+3059	None:intergenic
TGCTCTGCGCACTTTCCAGC+TGG	0.317103	contig28end:+2853	None:intergenic
CGAGCAGTTGGCTACCGATT+TGG	0.325496	contig28end:-3377	MsG0080048374.01.T01:CDS
CCACATCGGTCACTCATTCC+TGG	0.334416	contig28end:-1037	MsG0080048374.01.T01:CDS
TGTTGCTGCTTCTGCAAATA+TGG	0.349171	contig28end:-5166	MsG0080048374.01.T01:CDS
CGGTAGTACAATAGTTAATA+AGG	0.350120	contig28end:+3327	None:intergenic
TCATAAATTTGGAAATCTAA+TGG	0.361012	contig28end:-4475	MsG0080048374.01.T01:CDS
TAAATTTCCATGCATTTAAA+CGG	0.391018	contig28end:-6350	None:intergenic
ATCAGCCCTAAAAGTTGGTT+TGG	0.393834	contig28end:+4945	None:intergenic
TCATTCATCTTCCTGACTAA+TGG	0.397123	contig28end:+4832	None:intergenic
GGATAAAGATTACAGATATA+TGG	0.397835	contig28end:-4995	MsG0080048374.01.T01:CDS
CCATGTTGTCAGTAAAGTTT+GGG	0.409161	contig28end:+3060	None:intergenic
AAGTTTGTCAGATGATTTGT+TGG	0.432464	contig28end:-3888	MsG0080048374.01.T01:CDS
AATGTCTTGCTCCATTAGTC+AGG	0.435226	contig28end:-4843	MsG0080048374.01.T01:CDS
GAATGGACTGAGCAAGGGAT+TGG	0.435982	contig28end:+4695	None:intergenic
TTTGCCTGGTATTCTTGAAA+AGG	0.446459	contig28end:-5133	MsG0080048374.01.T01:intron
CGCTGTGGTTGTGGTGGTGA+AGG	0.448952	contig28end:-6287	MsG0080048374.01.T01:CDS
AAAGAAGGGAATTTAACAAT+AGG	0.449408	contig28end:+4439	None:intergenic
GATCAATTGTGGGGATAGAA+TGG	0.449555	contig28end:+4669	None:intergenic
ACCTTCTCCGTTTAAATGCA+TGG	0.457507	contig28end:+6343	None:intergenic
TACCGATTTGGACCCCATCT+TGG	0.468392	contig28end:-3365	MsG0080048374.01.T01:CDS
TTAGATTTCCAAATTTATGA+AGG	0.471598	contig28end:+4478	None:intergenic
TAATTCCTTTGATCAATTGT+GGG	0.486870	contig28end:+4659	None:intergenic
GTAATTCCTTTGATCAATTG+TGG	0.487509	contig28end:+4658	None:intergenic
TACAGCTTTGAAAGCATCTC+AGG	0.488817	contig28end:+2794	None:intergenic
TGGTCTTACCGCTGTGGTTG+TGG	0.491421	contig28end:-6296	MsG0080048374.01.T01:CDS
GTCAGATGATTTGTTGGCAA+AGG	0.491440	contig28end:-3882	MsG0080048374.01.T01:CDS
CTCCAAGATGGGGTCCAAAT+CGG	0.491575	contig28end:+3363	None:intergenic
TAGAATTCAACTGAGAAAGA+AGG	0.494171	contig28end:+4424	None:intergenic
AAGGTGTCCAAGGGACATTT+CGG	0.494843	contig28end:-3132	MsG0080048374.01.T01:CDS
AAGAAGTCTGTTGCATGCCT+TGG	0.494852	contig28end:-4384	MsG0080048374.01.T01:intron
AATGGACTGAGCAAGGGATT+GGG	0.495757	contig28end:+4696	None:intergenic
TGGGGATAGAATGGAAAGAA+TGG	0.499308	contig28end:+4678	None:intergenic
CTCTAGAAAGCTTTCTCCTA+AGG	0.500206	contig28end:-3151	MsG0080048374.01.T01:CDS
ATGGCGAACTTAGCTTTGCC+TGG	0.501633	contig28end:-5147	MsG0080048374.01.T01:CDS
TTGTATTTGTGACAGATGAC+TGG	0.502906	contig28end:-5021	MsG0080048374.01.T01:intron
AAGTTCTTTCAAAACAGAAA+AGG	0.504963	contig28end:+1089	None:intergenic
CAGGAAGATGAATGAGTCTA+GGG	0.507415	contig28end:-4824	MsG0080048374.01.T01:CDS
TCAGGAAGATGAATGAGTCT+AGG	0.508536	contig28end:-4825	MsG0080048374.01.T01:CDS
AACTCAGATATGTCAGTGCC+AGG	0.508921	contig28end:+3087	None:intergenic
CTGGAACTGTATCTCCAAGA+TGG	0.510937	contig28end:+3351	None:intergenic
TCCATGCATTTAAACGGAGA+AGG	0.518672	contig28end:-6344	MsG0080048374.01.T01:CDS
ACTTCTTACGAACCGTAGCT+TGG	0.520273	contig28end:+4400	None:intergenic
ACTCATTCCTGGAATTGAAA+AGG	0.521361	contig28end:-1026	MsG0080048374.01.T01:CDS
TCAGCATCAGCCCTAAAAGT+TGG	0.525275	contig28end:+4940	None:intergenic
AAATGTCCCTTGGACACCTT+AGG	0.526338	contig28end:+3135	None:intergenic
GTACAATAGTTAATAAGGAC+TGG	0.535090	contig28end:+3332	None:intergenic
ATGTGGTCAGCAAGGCAGTT+GGG	0.539195	contig28end:+1054	None:intergenic
CAGATGATGAAGATGCCAGC+TGG	0.540490	contig28end:-2868	MsG0080048374.01.T01:CDS
TGGAACTGTATCTCCAAGAT+GGG	0.545541	contig28end:+3352	None:intergenic
TGGAAAGAATGGACTGAGCA+AGG	0.546799	contig28end:+4689	None:intergenic
GCTTTCTCCTAAGGTGTCCA+AGG	0.548535	contig28end:-3142	MsG0080048374.01.T01:CDS
CAATACACCGAAATGTCCCT+TGG	0.550693	contig28end:+3125	None:intergenic
ATTCAACTTGATGATGCTGC+TGG	0.554455	contig28end:-4889	MsG0080048374.01.T01:CDS
GCTTCGTGAGTACAGTCTGC+AGG	0.560983	contig28end:-3285	MsG0080048374.01.T01:intron
AGAATTCAACTGAGAAAGAA+GGG	0.563265	contig28end:+4425	None:intergenic
TTCATTAAGCAAATCAGATG+TGG	0.566423	contig28end:+4972	None:intergenic
TGACAAAATACTTAATGGCA+AGG	0.569414	contig28end:-4776	MsG0080048374.01.T01:CDS
GTTGAATTCTAACCAAGCTA+CGG	0.572223	contig28end:-4412	MsG0080048374.01.T01:CDS
CCCAAACTTTACTGACAACA+TGG	0.572562	contig28end:-3060	MsG0080048374.01.T01:CDS
AATTCCTTTGATCAATTGTG+GGG	0.575735	contig28end:+4660	None:intergenic
TGATGAAGGTCATGAAGAGG+AGG	0.578951	contig28end:-3024	MsG0080048374.01.T01:CDS
TGGTGTTACAGTCGAGCAGT+TGG	0.581200	contig28end:-3389	MsG0080048374.01.T01:intron
CTATCCCCACAATTGATCAA+AGG	0.588223	contig28end:-4664	MsG0080048374.01.T01:CDS
AGATGATGAAGGTCATGAAG+AGG	0.589672	contig28end:-3027	MsG0080048374.01.T01:CDS
GAGGAGGATACAGATGATGA+AGG	0.594969	contig28end:-3038	MsG0080048374.01.T01:CDS
GATGTGGTCAGCAAGGCAGT+TGG	0.598634	contig28end:+1053	None:intergenic
GGAAAGAATGGACTGAGCAA+GGG	0.609928	contig28end:+4690	None:intergenic
CTTTACTGACAACATGGAGG+AGG	0.621235	contig28end:-3054	MsG0080048374.01.T01:CDS
ACATTCACATTTAATCTCTG+TGG	0.621279	contig28end:+4521	None:intergenic
AGTGACCGATGTGGTCAGCA+AGG	0.624266	contig28end:+1046	None:intergenic
CTTTCTCCTAAGGTGTCCAA+GGG	0.632037	contig28end:-3141	MsG0080048374.01.T01:CDS
TTGTGATGAAATTCTTCACC+TGG	0.640087	contig28end:-3105	MsG0080048374.01.T01:CDS
TGTGGTTGTGGTGGTGAAGG+TGG	0.641865	contig28end:-6284	MsG0080048374.01.T01:CDS
GCTTTCAAAGCTGTATGATG+AGG	0.645248	contig28end:-2786	MsG0080048374.01.T01:intron
AACTGCCTTGCTGACCACAT+CGG	0.651316	contig28end:-1051	MsG0080048374.01.T01:CDS
TGTATTTGTGACAGATGACT+GGG	0.652600	contig28end:-5020	MsG0080048374.01.T01:intron
TCTTACCGCTGTGGTTGTGG+TGG	0.662110	contig28end:-6293	MsG0080048374.01.T01:CDS
CCAGGAATGAGTGACCGATG+TGG	0.705282	contig28end:+1037	None:intergenic
GGAACTGTATCTCCAAGATG+GGG	0.709735	contig28end:+3353	None:intergenic
GACGCATGGTCTTACCGCTG+TGG	0.730140	contig28end:-6302	MsG0080048374.01.T01:CDS
TTTGTGACAGATGACTGGGA+AGG	0.746700	contig28end:-5016	MsG0080048374.01.T01:intron
AAACTTTACTGACAACATGG+AGG	0.751340	contig28end:-3057	MsG0080048374.01.T01:CDS
AGGACGAGAAACAATCAATG+CGG	0.764250	contig28end:+2814	None:intergenic
CTTCACCACCACAACCACAG+CGG	0.783832	contig28end:+6288	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATTATTAATGCAAAAAT+GGG	+	contig28end:5950-5969	None:intergenic	10.0%
!!	ATAAATATAACTGTATTAAA+TGG	-	contig28end:3832-3851	MsG0080048374.01.T01:intron	10.0%
!!	ATTGAATTGTAAAAAAAAAA+AGG	+	contig28end:2061-2080	None:intergenic	10.0%
!!	ATTTAACTAAAAATAATAAC+AGG	+	contig28end:4837-4856	None:intergenic	10.0%
!!	TAACTGTAAAATATATAAAA+TGG	-	contig28end:5558-5577	MsG0080048374.01.T01:intron	10.0%
!!	TTTAACTAAAAATAATAACA+GGG	+	contig28end:4836-4855	None:intergenic	10.0%
!!	TTTGTATGTATATTTATTTA+TGG	-	contig28end:4141-4160	MsG0080048374.01.T01:intron	10.0%
!!!	TATTATTTTTAGTTAAATGA+CGG	-	contig28end:4839-4858	MsG0080048374.01.T01:CDS	10.0%
!!	AAAAGCAGTAATAATAAATT+TGG	-	contig28end:1872-1891	MsG0080048374.01.T01:intron	15.0%
!!	AAAGCAGTAATAATAAATTT+GGG	-	contig28end:1873-1892	MsG0080048374.01.T01:intron	15.0%
!!	AACTGAATATTTATTTCATT+AGG	+	contig28end:5709-5728	None:intergenic	15.0%
!!	AATTTAATTCTCACAATATT+TGG	+	contig28end:1747-1766	None:intergenic	15.0%
!!	ATTGAATATATAACTAATAG+TGG	+	contig28end:4168-4187	None:intergenic	15.0%
!!	ATTTAATTCTCACAATATTT+GGG	+	contig28end:1746-1765	None:intergenic	15.0%
!!	CAAAATTATTAATGCAAAAA+TGG	+	contig28end:5951-5970	None:intergenic	15.0%
!!	CATTTCATAGTATAAAATTA+TGG	+	contig28end:4121-4140	None:intergenic	15.0%
!!	TACAGATTAACATTTATAAA+TGG	+	contig28end:3789-3808	None:intergenic	15.0%
!!	TTATGGATAATAAACAAATA+TGG	+	contig28end:4104-4123	None:intergenic	15.0%
!!!	TGAGATAAAAGAAATTTTAT+TGG	+	contig28end:4774-4793	None:intergenic	15.0%
!!!	TTTTTTAAGGGTTTTATAAT+TGG	-	contig28end:1533-1552	MsG0080048374.01.T01:intron	15.0%
!!	AAAATTTATTCTTCATGAGT+GGG	-	contig28end:3036-3055	MsG0080048374.01.T01:CDS	20.0%
!!	AAAGTAACTAAAATGATGTT+TGG	-	contig28end:3348-3367	MsG0080048374.01.T01:CDS	20.0%
!!	ACATTATGGTTGAAATAAAT+CGG	-	contig28end:3761-3780	MsG0080048374.01.T01:intron	20.0%
!!	TAAAATTTATTCTTCATGAG+TGG	-	contig28end:3035-3054	MsG0080048374.01.T01:CDS	20.0%
!!	TCATAAATTTGGAAATCTAA+TGG	-	contig28end:2886-2905	MsG0080048374.01.T01:CDS	20.0%
!!	TGTTACCAAATTGAAAAATA+AGG	-	contig28end:3515-3534	MsG0080048374.01.T01:intron	20.0%
!!	TTAGATTTCCAAATTTATGA+AGG	+	contig28end:2886-2905	None:intergenic	20.0%
!!	TTCAAATAATGTATTTCCTA+TGG	+	contig28end:1635-1654	None:intergenic	20.0%
!!	TTCATTTCAAACTCATATTT+GGG	+	contig28end:3261-3280	None:intergenic	20.0%
!!!	AAAATGGGTATTTTAGAATT+TGG	+	contig28end:5935-5954	None:intergenic	20.0%
!!!	GATTCATTCTCTTTTTTTAA+GGG	-	contig28end:1521-1540	MsG0080048374.01.T01:intron	20.0%
!!!	GTTTTAAAAACTTTTTGTGA+AGG	-	contig28end:1781-1800	MsG0080048374.01.T01:intron	20.0%
!!!	GTTTTTGACCAAAATAAAAA+AGG	+	contig28end:3391-3410	None:intergenic	20.0%
!	AAAATAAAAAAGGCCAAATC+AGG	+	contig28end:3381-3400	None:intergenic	25.0%
!	AAAGAAGGGAATTTAACAAT+AGG	+	contig28end:2925-2944	None:intergenic	25.0%
!	AAATAAAAAAGGCCAAATCA+GGG	+	contig28end:3380-3399	None:intergenic	25.0%
!	AAATTTATTCTTCATGAGTG+GGG	-	contig28end:3037-3056	MsG0080048374.01.T01:CDS	25.0%
!	AAGATTTAATTATACCGAGA+AGG	+	contig28end:5510-5529	None:intergenic	25.0%
!	AAGTTCTTTCAAAACAGAAA+AGG	+	contig28end:6275-6294	None:intergenic	25.0%
!	AATCTATCAAAACAAAGTAG+TGG	-	contig28end:6185-6204	MsG0080048374.01.T01:intron	25.0%
!	ACTGTCAACTACTTAAATTA+AGG	+	contig28end:5656-5675	None:intergenic	25.0%
!	AGATTTAATTATACCGAGAA+GGG	+	contig28end:5509-5528	None:intergenic	25.0%
!	AGTAACAAATTTGAGCTAAT+TGG	-	contig28end:3952-3971	MsG0080048374.01.T01:intron	25.0%
!	AGTTAGTTAGTTAGTTACTT+TGG	+	contig28end:2731-2750	None:intergenic	25.0%
!	ATCAAAACCTTGAGATTTAA+TGG	+	contig28end:6228-6247	None:intergenic	25.0%
!	ATGAGGTAATTGTAAAAACT+GGG	+	contig28end:6044-6063	None:intergenic	25.0%
!	CAAATAAAAATGTCTTACCA+AGG	+	contig28end:2997-3016	None:intergenic	25.0%
!	CTGATCTTAACAATAAATGA+TGG	+	contig28end:5607-5626	None:intergenic	25.0%
!	CTTCATTTCAAACTCATATT+TGG	+	contig28end:3262-3281	None:intergenic	25.0%
!	GGAAATACATTATTTGAAGA+TGG	-	contig28end:1637-1656	MsG0080048374.01.T01:intron	25.0%
!	GGATAAAGATTACAGATATA+TGG	-	contig28end:2366-2385	MsG0080048374.01.T01:intron	25.0%
!	TAAAAACTGGGATTAACTAA+AGG	+	contig28end:6032-6051	None:intergenic	25.0%
!	TAATTCCTTTGATCAATTGT+GGG	+	contig28end:2705-2724	None:intergenic	25.0%
!	TATGAGGTAATTGTAAAAAC+TGG	+	contig28end:6045-6064	None:intergenic	25.0%
!	TCGTACAATATACAAATGAT+TGG	-	contig28end:3557-3576	MsG0080048374.01.T01:intron	25.0%
!	TGCAAATATAAATACCATAC+AGG	+	contig28end:4406-4425	None:intergenic	25.0%
!	TGGATTGAAAGATTCTTATT+TGG	-	contig28end:1167-1186	MsG0080048374.01.T01:intron	25.0%
!	TGTGTAATTGTTTGTGTATA+TGG	-	contig28end:4801-4820	MsG0080048374.01.T01:CDS	25.0%
!	TTAAGAGAAGAAGATATAAG+AGG	-	contig28end:1844-1863	MsG0080048374.01.T01:intron	25.0%
!	TTAATTATTTGTACCCTTCT+CGG	-	contig28end:5493-5512	MsG0080048374.01.T01:intron	25.0%
!	TTGATATCCATTAAATCTCA+AGG	-	contig28end:6218-6237	MsG0080048374.01.T01:intron	25.0%
!	TTTACCTGTTAGTGTATATT+AGG	-	contig28end:1284-1303	MsG0080048374.01.T01:intron	25.0%
!!	AATTAACCAAACCAACTTTT+AGG	-	contig28end:2410-2429	MsG0080048374.01.T01:intron	25.0%
!!	AATTTTATTGGAAGAACATG+TGG	+	contig28end:4762-4781	None:intergenic	25.0%
!!	ATTAACCAAACCAACTTTTA+GGG	-	contig28end:2411-2430	MsG0080048374.01.T01:intron	25.0%
!!	TCTAAGATAACAAATGACAT+AGG	+	contig28end:5794-5813	None:intergenic	25.0%
!!	TTAAATCTGTCAATCAGTTT+TGG	+	contig28end:4898-4917	None:intergenic	25.0%
!!	TTGAAAGATTCTTATTTGGA+AGG	-	contig28end:1171-1190	MsG0080048374.01.T01:intron	25.0%
!!!	ATATCTTTAAAACAGCAATG+AGG	+	contig28end:5845-5864	None:intergenic	25.0%
!!!	CGATTCATTCTCTTTTTTTA+AGG	-	contig28end:1520-1539	MsG0080048374.01.T01:intron	25.0%
!!!	TGATTTGGCCTTTTTTATTT+TGG	-	contig28end:3380-3399	MsG0080048374.01.T01:CDS	25.0%
	AAATCTGAACATTGTTCCTT+AGG	-	contig28end:5875-5894	MsG0080048374.01.T01:intron	30.0%
	AAGAGAGAGAAAAAATGTCA+AGG	-	contig28end:5238-5257	MsG0080048374.01.T01:intron	30.0%
	AATCAAGTGGATAAATGAGA+AGG	+	contig28end:2755-2774	None:intergenic	30.0%
	AATCTGAACATTGTTCCTTA+GGG	-	contig28end:5876-5895	MsG0080048374.01.T01:intron	30.0%
	AATTCCTTTGATCAATTGTG+GGG	+	contig28end:2704-2723	None:intergenic	30.0%
	ACATTCACATTTAATCTCTG+TGG	+	contig28end:2843-2862	None:intergenic	30.0%
	ACCTCATAATTCATAATGTG+TGG	-	contig28end:6057-6076	MsG0080048374.01.T01:intron	30.0%
	ACGCAACAAAAAACTACAAT+AGG	+	contig28end:3127-3146	None:intergenic	30.0%
	ACTACCTAATATACACTAAC+AGG	+	contig28end:1291-1310	None:intergenic	30.0%
	AGAATTCAACTGAGAAAGAA+GGG	+	contig28end:2939-2958	None:intergenic	30.0%
	AGATTGTCAAATCCATCAAT+AGG	-	contig28end:6149-6168	MsG0080048374.01.T01:intron	30.0%
	AGCAATATGATCATTCAATG+TGG	-	contig28end:5989-6008	MsG0080048374.01.T01:intron	30.0%
	AGCGGAATAAACTTATTCAA+CGG	-	contig28end:1699-1718	MsG0080048374.01.T01:intron	30.0%
	AGTGTATATTAGGTAGTTTG+TGG	-	contig28end:1294-1313	MsG0080048374.01.T01:intron	30.0%
	ATAACTGTTACACCAAAACT+AGG	+	contig28end:1496-1515	None:intergenic	30.0%
	ATCAAGTGGATAAATGAGAA+GGG	+	contig28end:2754-2773	None:intergenic	30.0%
	CGCAACAAAAAACTACAATA+GGG	+	contig28end:3126-3145	None:intergenic	30.0%
	CGGTAGTACAATAGTTAATA+AGG	+	contig28end:4037-4056	None:intergenic	30.0%
	CTCTGTGACAAAATACTTAA+TGG	-	contig28end:2580-2599	MsG0080048374.01.T01:intron	30.0%
	GACAAAGAAAAGAAATCAAG+TGG	+	contig28end:2768-2787	None:intergenic	30.0%
	GCTAGATTTATTGTTTGATC+AGG	-	contig28end:4725-4744	MsG0080048374.01.T01:CDS	30.0%
	GTAATTCCTTTGATCAATTG+TGG	+	contig28end:2706-2725	None:intergenic	30.0%
	GTACAATAGTTAATAAGGAC+TGG	+	contig28end:4032-4051	None:intergenic	30.0%
	GTATTCATGATTTATCCACT+AGG	-	contig28end:1448-1467	MsG0080048374.01.T01:intron	30.0%
	TAAAATGCAATCACATTCTC+TGG	-	contig28end:1403-1422	MsG0080048374.01.T01:intron	30.0%
	TAGAATTCAACTGAGAAAGA+AGG	+	contig28end:2940-2959	None:intergenic	30.0%
	TGACAAAATACTTAATGGCA+AGG	-	contig28end:2585-2604	MsG0080048374.01.T01:intron	30.0%
	TGTTGTTAAATAGTGGTTGT+GGG	+	contig28end:3909-3928	None:intergenic	30.0%
	TTCATTAAGCAAATCAGATG+TGG	+	contig28end:2392-2411	None:intergenic	30.0%
!	AAGTTTGTCAGATGATTTGT+TGG	-	contig28end:3473-3492	MsG0080048374.01.T01:intron	30.0%
!	AGGTATTCATTGTGTTTTGT+GGG	-	contig28end:1037-1056	MsG0080048374.01.T01:CDS	30.0%
!	ATACAAAGTACTTCCAGATT+AGG	+	contig28end:5441-5460	None:intergenic	30.0%
!	TATATGACATAGTGGCTTTT+TGG	+	contig28end:3691-3710	None:intergenic	30.0%
!!	AAGGTATTCATTGTGTTTTG+TGG	-	contig28end:1036-1055	MsG0080048374.01.T01:CDS	30.0%
!!	GGTAAGACATTTTTATTTGC+TGG	-	contig28end:2998-3017	MsG0080048374.01.T01:intron	30.0%
!!	TATGTCATATATAGTGGACA+TGG	-	contig28end:3700-3719	MsG0080048374.01.T01:intron	30.0%
!!	TTATTAATCATAAAGCACCG+TGG	+	contig28end:1334-1353	None:intergenic	30.0%
!!	TTTTAGAGAAAAGACGCATT+TGG	-	contig28end:1960-1979	MsG0080048374.01.T01:intron	30.0%
!!!	TGTATTTTAATCCCTGACAT+TGG	-	contig28end:2146-2165	MsG0080048374.01.T01:intron	30.0%
!!!	TTCTGTTTTGAAAGAACTTG+TGG	-	contig28end:6276-6295	MsG0080048374.01.T01:CDS	30.0%
	AAAAAGAGACTGAAGCAAGA+GGG	+	contig28end:3620-3639	None:intergenic	35.0%
	AAACAGTGGAAGTCACATTA+TGG	-	contig28end:3747-3766	MsG0080048374.01.T01:intron	35.0%
	AAACCGAAACGAAACGAAAA+GGG	-	contig28end:1918-1937	MsG0080048374.01.T01:intron	35.0%
	AAACTTTACTGACAACATGG+AGG	-	contig28end:4304-4323	MsG0080048374.01.T01:intron	35.0%
	AAGTTTATTCCGCTTGAGTT+GGG	+	contig28end:1693-1712	None:intergenic	35.0%
	AATGTTTACTCACAACCAGA+AGG	+	contig28end:4699-4718	None:intergenic	35.0%
	ACAGCATTACTGCACTATAT+AGG	-	contig28end:3723-3742	MsG0080048374.01.T01:intron	35.0%
	ACATAGGTTACAGATCTCAA+GGG	+	contig28end:5778-5797	None:intergenic	35.0%
	ACTAACATTATAACACCTCG+TGG	-	contig28end:3867-3886	MsG0080048374.01.T01:CDS	35.0%
	ACTCATTCCTGGAATTGAAA+AGG	-	contig28end:6335-6354	MsG0080048374.01.T01:CDS	35.0%
	AGACTGATGCAAATGAAATG+AGG	-	contig28end:5397-5416	MsG0080048374.01.T01:intron	35.0%
	AGCCACTATGTCATATATAG+TGG	-	contig28end:3694-3713	MsG0080048374.01.T01:intron	35.0%
	AGTATACCATGAAGTTACAG+AGG	+	contig28end:1145-1164	None:intergenic	35.0%
	ATATTCATTTGCACTCTCTC+TGG	+	contig28end:4472-4491	None:intergenic	35.0%
	ATGTGCCTATTTGATTCAGT+TGG	-	contig28end:4377-4396	MsG0080048374.01.T01:intron	35.0%
	CAACCACTATTTAACAACAC+TGG	-	contig28end:3910-3929	MsG0080048374.01.T01:intron	35.0%
	CATGTCAGATAAACAACCAT+GGG	+	contig28end:5306-5325	None:intergenic	35.0%
	CCATGTTGTCAGTAAAGTTT+GGG	+	contig28end:4304-4323	None:intergenic	35.0%
	GAGAGAAAAAATGTCAAGGT+AGG	-	contig28end:5242-5261	MsG0080048374.01.T01:intron	35.0%
	GCCACACATTATGAATTATG+AGG	+	contig28end:6061-6080	None:intergenic	35.0%
	GGTAACCAACTGAATCAAAT+AGG	+	contig28end:4385-4404	None:intergenic	35.0%
	GTATGCATTTCTCCTGTAAA+AGG	-	contig28end:5674-5693	MsG0080048374.01.T01:intron	35.0%
	GTCCACTATATATGACATAG+TGG	+	contig28end:3699-3718	None:intergenic	35.0%
	GTGTTATCACTAGTAGATAG+TGG	-	contig28end:3652-3671	MsG0080048374.01.T01:intron	35.0%
	GTTGAATTCTAACCAAGCTA+CGG	-	contig28end:2949-2968	MsG0080048374.01.T01:intron	35.0%
	GTTGTTAAATAGTGGTTGTG+GGG	+	contig28end:3908-3927	None:intergenic	35.0%
	TAAAAAGAGACTGAAGCAAG+AGG	+	contig28end:3621-3640	None:intergenic	35.0%
	TAAACCGAAACGAAACGAAA+AGG	-	contig28end:1917-1936	MsG0080048374.01.T01:intron	35.0%
	TAAGTTTATTCCGCTTGAGT+TGG	+	contig28end:1694-1713	None:intergenic	35.0%
	TACAAATGATTGGCGCTATA+AGG	-	contig28end:3567-3586	MsG0080048374.01.T01:intron	35.0%
	TCAAACTGGAAATGTCACAA+AGG	-	contig28end:5372-5391	MsG0080048374.01.T01:intron	35.0%
	TCATGATTTATCCACTAGGT+CGG	-	contig28end:1452-1471	MsG0080048374.01.T01:intron	35.0%
	TCATTCATCTTCCTGACTAA+TGG	+	contig28end:2532-2551	None:intergenic	35.0%
	TCCATGTTGTCAGTAAAGTT+TGG	+	contig28end:4305-4324	None:intergenic	35.0%
	TCTGGTTGTGAGTAAACATT+TGG	-	contig28end:4699-4718	MsG0080048374.01.T01:CDS	35.0%
	TCTTGCTTCAACAACCATTT+AGG	+	contig28end:6121-6140	None:intergenic	35.0%
	TGTATTTGTGACAGATGACT+GGG	-	contig28end:2341-2360	MsG0080048374.01.T01:intron	35.0%
	TTGATCATAGTTGTCTATGC+AGG	-	contig28end:6243-6262	MsG0080048374.01.T01:intron	35.0%
	TTGTATTTGTGACAGATGAC+TGG	-	contig28end:2340-2359	MsG0080048374.01.T01:intron	35.0%
	TTGTGATGAAATTCTTCACC+TGG	-	contig28end:4256-4275	MsG0080048374.01.T01:intron	35.0%
	TTGTTAAATAGTGGTTGTGG+GGG	+	contig28end:3907-3926	None:intergenic	35.0%
	TTTGCCTGGTATTCTTGAAA+AGG	-	contig28end:2228-2247	MsG0080048374.01.T01:intron	35.0%
!	AAGCTCTTCATCATTTTCTG+AGG	+	contig28end:4060-4079	None:intergenic	35.0%
!	AATAGGGTGTTTAACCAAGA+TGG	+	contig28end:3110-3129	None:intergenic	35.0%
!	ACAATATTTGGGACCAAAAG+CGG	+	contig28end:1735-1754	None:intergenic	35.0%
!	CAACCAGTGTTGTTAAATAG+TGG	+	contig28end:3916-3935	None:intergenic	35.0%
!	CAATTATTTTCCCTCCATCT+TGG	-	contig28end:3093-3112	MsG0080048374.01.T01:CDS	35.0%
!	GTGTGTGTTGGTATATTCAT+CGG	-	contig28end:2291-2310	MsG0080048374.01.T01:intron	35.0%
!	GTGTTGTTAAATAGTGGTTG+TGG	+	contig28end:3910-3929	None:intergenic	35.0%
!	TAATGTCGAAATTTTGCTGC+AGG	-	contig28end:4187-4206	MsG0080048374.01.T01:intron	35.0%
!	TATTTTGTCACAGAGTTGAC+TGG	+	contig28end:2575-2594	None:intergenic	35.0%
!	TTCTTCTAGAAACATCCTCT+TGG	+	contig28end:5746-5765	None:intergenic	35.0%
!!	AGTACCTTTTCAAGAATACC+AGG	+	contig28end:2235-2254	None:intergenic	35.0%
!!	GGCATTTGTTTTTCCTAATC+TGG	-	contig28end:5425-5444	MsG0080048374.01.T01:intron	35.0%
!!	TGATTTTAACCCAACTCAAG+CGG	-	contig28end:1681-1700	MsG0080048374.01.T01:intron	35.0%
!!!	GGCAGCCTTATTTTTCAATT+TGG	+	contig28end:3523-3542	None:intergenic	35.0%
!!!	TGATTGTCTTTTAAGACCCA+TGG	-	contig28end:5287-5306	MsG0080048374.01.T01:intron	35.0%
	AATGTCTTGCTCCATTAGTC+AGG	-	contig28end:2518-2537	MsG0080048374.01.T01:intron	40.0%
	ACCATGAATAGCGCATAGTA+GGG	+	contig28end:1608-1627	None:intergenic	40.0%
	AGATGATGAAGGTCATGAAG+AGG	-	contig28end:4334-4353	MsG0080048374.01.T01:intron	40.0%
	AGGACGAGAAACAATCAATG+CGG	+	contig28end:4550-4569	None:intergenic	40.0%
	ATACCATGAAGTTACAGAGG+TGG	+	contig28end:1142-1161	None:intergenic	40.0%
	ATTTGGGTAAGCAAGCAAGT+AGG	-	contig28end:1889-1908	MsG0080048374.01.T01:intron	40.0%
	CAGGAAGATGAATGAGTCTA+GGG	-	contig28end:2537-2556	MsG0080048374.01.T01:intron	40.0%
	CATTATAACACCTCGTGGTA+TGG	-	contig28end:3872-3891	MsG0080048374.01.T01:CDS	40.0%
	CCCAAACTTTACTGACAACA+TGG	-	contig28end:4301-4320	MsG0080048374.01.T01:intron	40.0%
	CTATCCCCACAATTGATCAA+AGG	-	contig28end:2697-2716	MsG0080048374.01.T01:intron	40.0%
	CTTGCATCATTATGTCCTTC+TGG	-	contig28end:4681-4700	MsG0080048374.01.T01:CDS	40.0%
	GACATAGGTTACAGATCTCA+AGG	+	contig28end:5779-5798	None:intergenic	40.0%
	GATCAATTGTGGGGATAGAA+TGG	+	contig28end:2695-2714	None:intergenic	40.0%
	GATTCAGTTGGTTACCTGTA+TGG	-	contig28end:4389-4408	MsG0080048374.01.T01:CDS	40.0%
	GCATGTCAGATAAACAACCA+TGG	+	contig28end:5307-5326	None:intergenic	40.0%
	GCTTTCAAAGCTGTATGATG+AGG	-	contig28end:4575-4594	MsG0080048374.01.T01:intron	40.0%
	GGCAACTTTGATTCAGTAAC+TGG	-	contig28end:3151-3170	MsG0080048374.01.T01:CDS	40.0%
	GTAACTTCATGGTATACTCG+TGG	-	contig28end:1147-1166	MsG0080048374.01.T01:intron	40.0%
	GTGAAGGATCATCACTACTT+AGG	-	contig28end:1797-1816	MsG0080048374.01.T01:intron	40.0%
	GTTTGGTATCAACCCTGATT+TGG	-	contig28end:3365-3384	MsG0080048374.01.T01:CDS	40.0%
	TCAGGAAGATGAATGAGTCT+AGG	-	contig28end:2536-2555	MsG0080048374.01.T01:intron	40.0%
	TCATAGTTGTCTATGCAGGT+TGG	-	contig28end:6247-6266	MsG0080048374.01.T01:intron	40.0%
	TCTCTTCGAACTTTACCCTA+AGG	+	contig28end:5894-5913	None:intergenic	40.0%
	TGACATGCATATGTTGCAGA+TGG	-	contig28end:5319-5338	MsG0080048374.01.T01:intron	40.0%
	TGCAAATGAAATGAGGCTAG+TGG	-	contig28end:5404-5423	MsG0080048374.01.T01:intron	40.0%
	TGCACTATATAGGCAAACAG+TGG	-	contig28end:3733-3752	MsG0080048374.01.T01:intron	40.0%
	TGCGACGTCCTTCATAAATT+TGG	-	contig28end:2875-2894	MsG0080048374.01.T01:CDS	40.0%
	TGGAACTGTATCTCCAAGAT+GGG	+	contig28end:4012-4031	None:intergenic	40.0%
	TGGGGATAGAATGGAAAGAA+TGG	+	contig28end:2686-2705	None:intergenic	40.0%
	TGTACGAGTCATATCAGACT+TGG	+	contig28end:3544-3563	None:intergenic	40.0%
	TTTCATACGATGAGAGTTGC+TGG	-	contig28end:1568-1587	MsG0080048374.01.T01:intron	40.0%
	TTTGGGTAAGCAAGCAAGTA+GGG	-	contig28end:1890-1909	MsG0080048374.01.T01:intron	40.0%
	TTTGTCGTACTCATTCCAAG+AGG	-	contig28end:5728-5747	MsG0080048374.01.T01:intron	40.0%
!	ATCAGCCCTAAAAGTTGGTT+TGG	+	contig28end:2419-2438	None:intergenic	40.0%
!	CGTTTTATCTGAATTCCCAC+AGG	-	contig28end:2811-2830	MsG0080048374.01.T01:CDS	40.0%
!	CTCTAGAAAGCTTTCTCCTA+AGG	-	contig28end:4210-4229	MsG0080048374.01.T01:intron	40.0%
!	GAACCCTTTTCGTTTCGTTT+CGG	+	contig28end:1924-1943	None:intergenic	40.0%
!	GTTTTTGTGTGTGTGTGTGT+TGG	-	contig28end:2279-2298	MsG0080048374.01.T01:intron	40.0%
!	TGGTTCTTTACGCCTAGTTT+TGG	-	contig28end:1481-1500	MsG0080048374.01.T01:intron	40.0%
!	TGTTGCTGCTTCTGCAAATA+TGG	-	contig28end:2195-2214	MsG0080048374.01.T01:intron	40.0%
!!	ATTCAACTTGATGATGCTGC+TGG	-	contig28end:2472-2491	MsG0080048374.01.T01:intron	40.0%
!!	CTCTTCATCATTTTCTGAGG+CGG	+	contig28end:4057-4076	None:intergenic	40.0%
!!	GTCAGATGATTTGTTGGCAA+AGG	-	contig28end:3479-3498	MsG0080048374.01.T01:intron	40.0%
!!	TACAGCTTTGAAAGCATCTC+AGG	+	contig28end:4570-4589	None:intergenic	40.0%
!!	TCACTAGTAGATAGTGGAAG+TGG	-	contig28end:3658-3677	MsG0080048374.01.T01:intron	40.0%
!!!	GTAGTTTTTTGTTGCGTTCG+AGG	-	contig28end:3130-3149	MsG0080048374.01.T01:CDS	40.0%
!!!	TGGACTTTTTTTGCTCTCCA+CGG	-	contig28end:1314-1333	MsG0080048374.01.T01:intron	40.0%
	AAATGTCCCTTGGACACCTT+AGG	+	contig28end:4229-4248	None:intergenic	45.0%
	AACTCAGATATGTCAGTGCC+AGG	+	contig28end:4277-4296	None:intergenic	45.0%
	AAGAAGTCTGTTGCATGCCT+TGG	-	contig28end:2977-2996	MsG0080048374.01.T01:intron	45.0%
	ACGTGCAATGCAGTCCTAAA+TGG	-	contig28end:6104-6123	MsG0080048374.01.T01:intron	45.0%
	ACTTCTTACGAACCGTAGCT+TGG	+	contig28end:2964-2983	None:intergenic	45.0%
	ATCTCTGTGGTCATATCCTG+TGG	+	contig28end:2830-2849	None:intergenic	45.0%
	ATGAGAGTTGCTGGTGTACT+AGG	-	contig28end:1577-1596	MsG0080048374.01.T01:intron	45.0%
	ATTGAGCTCTTGCGTCAAAC+TGG	-	contig28end:5358-5377	MsG0080048374.01.T01:intron	45.0%
	CAATACACCGAAATGTCCCT+TGG	+	contig28end:4239-4258	None:intergenic	45.0%
	CACCATGAATAGCGCATAGT+AGG	+	contig28end:1609-1628	None:intergenic	45.0%
	CTGGAACTGTATCTCCAAGA+TGG	+	contig28end:4013-4032	None:intergenic	45.0%
	CTTTACTGACAACATGGAGG+AGG	-	contig28end:4307-4326	MsG0080048374.01.T01:intron	45.0%
	GAGGAGGATACAGATGATGA+AGG	-	contig28end:4323-4342	MsG0080048374.01.T01:intron	45.0%
	GAGTCGATCAGAAATCGATG+CGG	+	contig28end:2000-2019	None:intergenic	45.0%
	GGAACTGTATCTCCAAGATG+GGG	+	contig28end:4011-4030	None:intergenic	45.0%
	GGGTGTTTAACCAAGATGGA+GGG	+	contig28end:3106-3125	None:intergenic	45.0%
	TAAATAGTGGTTGTGGGGGA+AGG	+	contig28end:3903-3922	None:intergenic	45.0%
	TCAGCATCAGCCCTAAAAGT+TGG	+	contig28end:2424-2443	None:intergenic	45.0%
	TCTCTGTGGTCATATCCTGT+GGG	+	contig28end:2829-2848	None:intergenic	45.0%
	TGATGAAGGTCATGAAGAGG+AGG	-	contig28end:4337-4356	MsG0080048374.01.T01:intron	45.0%
	TTTGGACAAGCCTGTAAAGC+AGG	+	contig28end:4880-4899	None:intergenic	45.0%
	TTTGTGACAGATGACTGGGA+AGG	-	contig28end:2345-2364	MsG0080048374.01.T01:intron	45.0%
!	AAGGTGTCCAAGGGACATTT+CGG	-	contig28end:4229-4248	MsG0080048374.01.T01:intron	45.0%
!	AGGGTGTTTAACCAAGATGG+AGG	+	contig28end:3107-3126	None:intergenic	45.0%
!	AGTGAGTCGATTCCAATGTC+AGG	+	contig28end:2161-2180	None:intergenic	45.0%
!	ATTGTGTTTTGTGGGACGCA+TGG	-	contig28end:1045-1064	MsG0080048374.01.T01:CDS	45.0%
!	CTTTCTCCTAAGGTGTCCAA+GGG	-	contig28end:4220-4239	MsG0080048374.01.T01:intron	45.0%
!	GATTGCACCTATTTTGTCGC+GGG	-	contig28end:1099-1118	MsG0080048374.01.T01:CDS	45.0%
!	GGATTGCACCTATTTTGTCG+CGG	-	contig28end:1098-1117	MsG0080048374.01.T01:CDS	45.0%
!	GTGAGTCGATTCCAATGTCA+GGG	+	contig28end:2160-2179	None:intergenic	45.0%
!	TAGAGCACTTCTGTTACGAC+TGG	-	contig28end:5810-5829	MsG0080048374.01.T01:intron	45.0%
!!	AATGGACTGAGCAAGGGATT+GGG	+	contig28end:2668-2687	None:intergenic	45.0%
!!	GCTATTCATGGTGCTACCAT+AGG	-	contig28end:1616-1635	MsG0080048374.01.T01:intron	45.0%
!!	GGAAAGAATGGACTGAGCAA+GGG	+	contig28end:2674-2693	None:intergenic	45.0%
!!	TGGAAAGAATGGACTGAGCA+AGG	+	contig28end:2675-2694	None:intergenic	45.0%
!!!	AGGAAGAGCACTCCTTTTAC+AGG	+	contig28end:5689-5708	None:intergenic	45.0%
	AACCAATCAGACCGACCTAG+TGG	+	contig28end:1466-1485	None:intergenic	50.0%
	AACTGCCTTGCTGACCACAT+CGG	-	contig28end:6310-6329	MsG0080048374.01.T01:CDS	50.0%
	AGTCTGAGTCTTGAAGCACG+TGG	-	contig28end:1257-1276	MsG0080048374.01.T01:intron	50.0%
	ATCCACTAGGTCGGTCTGAT+TGG	-	contig28end:1461-1480	MsG0080048374.01.T01:intron	50.0%
	ATGTGGTCAGCAAGGCAGTT+GGG	+	contig28end:6310-6329	None:intergenic	50.0%
	CAGATGATGAAGATGCCAGC+TGG	-	contig28end:4493-4512	MsG0080048374.01.T01:CDS	50.0%
	CCTGTAAAGCAGGAAGTCGA+AGG	+	contig28end:4870-4889	None:intergenic	50.0%
	CCTTCGACTTCCTGCTTTAC+AGG	-	contig28end:4867-4886	MsG0080048374.01.T01:CDS	50.0%
	CTCACGCAACTGCCTATTGA+TGG	+	contig28end:6164-6183	None:intergenic	50.0%
	CTCCAAGATGGGGTCCAAAT+CGG	+	contig28end:4001-4020	None:intergenic	50.0%
	GCCCTACTATGCGCTATTCA+TGG	-	contig28end:1604-1623	MsG0080048374.01.T01:intron	50.0%
	GTGCCACCTCTGTAACTTCA+TGG	-	contig28end:1136-1155	MsG0080048374.01.T01:intron	50.0%
	TCGATCAGAAATCGATGCGG+CGG	+	contig28end:1997-2016	None:intergenic	50.0%
	TTGGGACCAAAAGCGGTTAG+CGG	+	contig28end:1728-1747	None:intergenic	50.0%
!	GATGCTGCTGGTGATGTTTC+TGG	-	contig28end:2484-2503	MsG0080048374.01.T01:intron	50.0%
!	GCTTTCTCCTAAGGTGTCCA+AGG	-	contig28end:4219-4238	MsG0080048374.01.T01:intron	50.0%
!	TCTGATCGACTCTCGCACTA+GGG	-	contig28end:2008-2027	MsG0080048374.01.T01:intron	50.0%
!	TTCTGATCGACTCTCGCACT+AGG	-	contig28end:2007-2026	MsG0080048374.01.T01:intron	50.0%
!!	ATGGCGAACTTAGCTTTGCC+TGG	-	contig28end:2214-2233	MsG0080048374.01.T01:intron	50.0%
!!	GAATGGACTGAGCAAGGGAT+TGG	+	contig28end:2669-2688	None:intergenic	50.0%
!!	TACCGATTTGGACCCCATCT+TGG	-	contig28end:3996-4015	MsG0080048374.01.T01:intron	50.0%
!!	TGGTGTTACAGTCGAGCAGT+TGG	-	contig28end:3972-3991	MsG0080048374.01.T01:intron	50.0%
	AGTGACCGATGTGGTCAGCA+AGG	+	contig28end:6318-6337	None:intergenic	55.0%
	CCAACCTCCCGCGACAAAAT+AGG	+	contig28end:1109-1128	None:intergenic	55.0%
	CCACATCGGTCACTCATTCC+TGG	-	contig28end:6324-6343	MsG0080048374.01.T01:CDS	55.0%
	CCAGGAATGAGTGACCGATG+TGG	+	contig28end:6327-6346	None:intergenic	55.0%
	CTTCACCACCACAACCACAG+CGG	+	contig28end:1076-1095	None:intergenic	55.0%
	GATGTGGTCAGCAAGGCAGT+TGG	+	contig28end:6311-6330	None:intergenic	55.0%
	GCTTCGTGAGTACAGTCTGC+AGG	-	contig28end:4076-4095	MsG0080048374.01.T01:intron	55.0%
	TCTTACCGCTGTGGTTGTGG+TGG	-	contig28end:1068-1087	MsG0080048374.01.T01:CDS	55.0%
!	CCTATTTTGTCGCGGGAGGT+TGG	-	contig28end:1106-1125	MsG0080048374.01.T01:intron	55.0%
!	CGAGCAGTTGGCTACCGATT+TGG	-	contig28end:3984-4003	MsG0080048374.01.T01:intron	55.0%
!	TGCACCTATTTTGTCGCGGG+AGG	-	contig28end:1102-1121	MsG0080048374.01.T01:intron	55.0%
!	TGGTCTTACCGCTGTGGTTG+TGG	-	contig28end:1065-1084	MsG0080048374.01.T01:CDS	55.0%
!	TGTGGTTGTGGTGGTGAAGG+TGG	-	contig28end:1077-1096	MsG0080048374.01.T01:CDS	55.0%
!!	ACAGATCTCAAGGGCGCTAC+TGG	+	contig28end:5769-5788	None:intergenic	55.0%
	GAAGGCAACGCCATACCACG+AGG	+	contig28end:3885-3904	None:intergenic	60.0%
	TGCTCTGCGCACTTTCCAGC+TGG	+	contig28end:4511-4530	None:intergenic	60.0%
!	CGCTGTGGTTGTGGTGGTGA+AGG	-	contig28end:1074-1093	MsG0080048374.01.T01:CDS	60.0%
!	CGGTCACCGCTAACCGCTTT+TGG	-	contig28end:1719-1738	MsG0080048374.01.T01:intron	60.0%
!	GACGCATGGTCTTACCGCTG+TGG	-	contig28end:1059-1078	MsG0080048374.01.T01:CDS	60.0%
!	GTCGCGGGAGGTTGGTTCAA+AGG	-	contig28end:1114-1133	MsG0080048374.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
contig28end	gene	1020	6363	1020	ID=MsG0080048374.01;Name=MsG0080048374.01
contig28end	mRNA	1020	6363	1020	ID=MsG0080048374.01.T01;Parent=MsG0080048374.01;Name=MsG0080048374.01.T01;_AED=0.40;_eAED=1.00;_QI=0\|0\|0\|0.88\|1\|1\|9\|0\|429
contig28end	exon	6260	6363	6260	ID=MsG0080048374.01.T01:exon:19936;Parent=MsG0080048374.01.T01
contig28end	exon	5134	5194	5134	ID=MsG0080048374.01.T01:exon:19937;Parent=MsG0080048374.01.T01
contig28end	exon	4651	5028	4651	ID=MsG0080048374.01.T01:exon:19938;Parent=MsG0080048374.01.T01
contig28end	exon	4385	4550	4385	ID=MsG0080048374.01.T01:exon:19939;Parent=MsG0080048374.01.T01
contig28end	exon	3839	3923	3839	ID=MsG0080048374.01.T01:exon:19940;Parent=MsG0080048374.01.T01
contig28end	exon	3286	3400	3286	ID=MsG0080048374.01.T01:exon:19941;Parent=MsG0080048374.01.T01
contig28end	exon	3017	3174	3017	ID=MsG0080048374.01.T01:exon:19942;Parent=MsG0080048374.01.T01
contig28end	exon	2787	2910	2787	ID=MsG0080048374.01.T01:exon:19943;Parent=MsG0080048374.01.T01
contig28end	exon	1020	1118	1020	ID=MsG0080048374.01.T01:exon:19944;Parent=MsG0080048374.01.T01
contig28end	CDS	6260	6363	6260	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	5134	5194	5134	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	4651	5028	4651	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	4385	4550	4385	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	3839	3923	3839	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	3286	3400	3286	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	3017	3174	3017	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	2787	2910	2787	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01
contig28end	CDS	1020	1118	1020	ID=MsG0080048374.01.T01:cds;Parent=MsG0080048374.01.T01

Gene Sequence

>MsG0080048374.01.T01

ATGCATTTAAACGGAGAAGGTATTCATTGTGTTTTGTGGGACGCATGGTCTTACCGCTGTGGTTGTGGTGGTGAAGGTGGATTGCACCTATTTTGTCGCGGGAGTGTTGTTGTTGCTGCTTCTGCAAATATGGCGAACTTAGCTTTGCCTGGTATTCTTGAAAAGATGACTGGGAAGGATAAAGATTACAGATATATGGCCACATCTGATTTGCTTAATGAATTAACCAAACCAACTTTTAGGGCTGATGCTGATCTCGAACTTAAATTGAAAAATATAATCATTCAACTTGATGATGCTGCTGGTGATGTTTCTGGTCTTGCTGTTAAATGTCTTGCTCCATTAGTCAGGAAGATGAATGAGTCTAGGGTTGTTGAAATGACCAGTCAACTCTGTGACAAAATACTTAATGGCAAGGATCAGCATCGCGACACTGCTAGCATTGCTTTGAAGACTGTTGTTGCTGAAGTTTCTACCCAATCCCTTGCTCAGTCCATTCTTTCCATTCTATCCCCACAATTGATCAAAGGAATTACTGCCAAAGATATGACCACAGAGATTAAATGTGAATGTCTTGATATTTTATGCGACGTCCTTCATAAATTTGGAAATCTAATGGCAGCAGATCATGACCTATTGTTAAATTCCCTTCTTTCTCAGTTGAATTCTAACCAAGCTACGGTTCGTAAGAAGTCTGTTGCATGCCTTGCATCTCTTTCTTCAAGTTTGTCAGATGATTTGTTGGCAAAGGCAACAGTTGAAATTGTTACCAAATTGAAAAATAAGGCTGCCAATCGAGCAGTTGGCTACCGATTTGGACCCCATCTTGGAGATACAGTTCCAGTCCTTATTAACTATTGTACTACCGCCTCAGAAAATGATGAAGAGCTTCGTGAGTACAGTCTGCAGGCTCTAGAAAGCTTTCTCCTAAGGTGTCCAAGGGACATTTCGGTGTATTGTGATGAAATTCTTCACCTGGCACTGACATATCTGAGTTATGACCCAAACTTTACTGACAACATGGAGGAGGATACAGATGATGAAGGTCATGAAGAGGAGGATGATGAAGAGAGTGCAAATGAATATACAGATGATGAAGATGCCAGCTGGAAAGTGCGCAGAGCAGCAGCTAAATGCTTAGCCGCATTGATTGTTTCTCGTCCTGAGATGCTTTCAAAGCTGTATGATGAGGTTGGTGCCTTTTCTGTTTTGAAAGAACTTGTGGTTGTCTTACCCAACTGCCTTGCTGACCACATCGGTCACTCATTCCTGGAATTGAAAAGGCATTAA

Protein sequence

>MsG0080048374.01.T01

MHLNGEGIHCVLWDAWSYRCGCGGEGGLHLFCRGSVVVAASANMANLALPGILEKMTGKDKDYRYMATSDLLNELTKPTFRADADLELKLKNIIIQLDDAAGDVSGLAVKCLAPLVRKMNESRVVEMTSQLCDKILNGKDQHRDTASIALKTVVAEVSTQSLAQSILSILSPQLIKGITAKDMTTEIKCECLDILCDVLHKFGNLMAADHDLLLNSLLSQLNSNQATVRKKSVACLASLSSSLSDDLLAKATVEIVTKLKNKAANRAVGYRFGPHLGDTVPVLINYCTTASENDEELREYSLQALESFLLRCPRDISVYCDEILHLALTYLSYDPNFTDNMEEDTDDEGHEEEDDEESANEYTDDEDASWKVRRAAAKCLAALIVSRPEMLSKLYDEVGAFSVLKELVVVLPNCLADHIGHSFLELKRH*