Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040895.01.T01 | KAH1078381.1 | 70.149 | 134 | 33 | 2 | 61 | 190 | 146 | 276 | 1.06E-51 | 182 |
MsG0780040895.01.T02 | XP_024625596.1 | 92.105 | 114 | 2 | 1 | 9 | 122 | 289 | 395 | 5.84E-68 | 222 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040895.01.T01 | B8AXC3 | 66.412 | 131 | 31 | 3 | 61 | 184 | 193 | 317 | 8.66E-40 | 144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040895.01.T01 | A0A445FI30 | 70.149 | 134 | 33 | 2 | 61 | 190 | 176 | 306 | 5.20e-52 | 183 |
MsG0780040895.01.T02 | G7L1P7 | 92.105 | 114 | 2 | 1 | 9 | 122 | 304 | 410 | 3.08e-68 | 222 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180002891.01 | MsG0780040895.01 | 0.801474 | 8.850740e-49 | 4.230723e-46 |
MsG0780040895.01 | MsG0880044410.01 | 0.835648 | 1.485197e-56 | 1.827554e-53 |
MsG0780040895.01 | MsG0880044435.01 | 0.801102 | 1.055063e-48 | 4.996386e-46 |
MsG0780040895.01 | MsG0880045899.01 | 0.839308 | 1.712167e-57 | 2.355035e-54 |
MsG0780040895.01 | MsG0880047740.01 | 0.813797 | 2.134050e-51 | 1.407237e-48 |
MsG0380013687.01 | MsG0780040895.01 | 0.802370 | 5.792963e-49 | 2.832966e-46 |
MsG0380014530.01 | MsG0780040895.01 | 0.808769 | 2.631856e-50 | 1.517818e-47 |
MsG0480018910.01 | MsG0780040895.01 | 0.806899 | 6.574719e-50 | 3.611024e-47 |
MsG0480021999.01 | MsG0780040895.01 | 0.827805 | 1.277482e-54 | 1.246391e-51 |
MsG0580024820.01 | MsG0780040895.01 | 0.880583 | 4.871014e-70 | 2.761520e-66 |
MsG0380017253.01 | MsG0780040895.01 | -0.825019 | 5.889872e-54 | 5.305189e-51 |
MsG0480018323.01 | MsG0780040895.01 | 0.804890 | 1.738422e-49 | 9.069510e-47 |
MsG0280006587.01 | MsG0780040895.01 | 0.803859 | 2.850523e-49 | 1.448085e-46 |
MsG0280008939.01 | MsG0780040895.01 | 0.816596 | 5.098585e-52 | 3.628343e-49 |
MsG0280008966.01 | MsG0780040895.01 | 0.832955 | 7.032752e-56 | 7.982986e-53 |
MsG0780036584.01 | MsG0780040895.01 | 0.800350 | 1.502025e-48 | 6.978347e-46 |
MsG0780039256.01 | MsG0780040895.01 | 0.830674 | 2.570394e-55 | 2.727070e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040895.01.T01 | MTR_7g061190 | 77.600 | 125 | 15 | 3 | 67 | 184 | 9 | 127 | 6.97e-48 | 154 |
MsG0780040895.01.T01 | MTR_7g100590 | 75.000 | 128 | 25 | 2 | 61 | 184 | 161 | 285 | 5.14e-47 | 160 |
MsG0780040895.01.T01 | MTR_4g094868 | 66.142 | 127 | 38 | 2 | 61 | 184 | 42 | 166 | 7.93e-41 | 142 |
MsG0780040895.01.T01 | MTR_5g016810 | 66.142 | 127 | 38 | 2 | 61 | 184 | 174 | 298 | 1.25e-39 | 141 |
MsG0780040895.01.T01 | MTR_4g094868 | 66.142 | 127 | 38 | 2 | 61 | 184 | 198 | 322 | 1.72e-39 | 141 |
MsG0780040895.01.T01 | MTR_4g094868 | 66.142 | 127 | 38 | 2 | 61 | 184 | 198 | 322 | 1.74e-39 | 141 |
MsG0780040895.01.T01 | MTR_5g016810 | 61.832 | 131 | 43 | 1 | 61 | 184 | 174 | 304 | 2.39e-38 | 138 |
MsG0780040895.01.T01 | MTR_2g093060 | 64.122 | 131 | 34 | 3 | 61 | 184 | 156 | 280 | 5.23e-38 | 136 |
MsG0780040895.01.T01 | MTR_2g093060 | 64.122 | 131 | 34 | 3 | 61 | 184 | 156 | 280 | 5.49e-38 | 136 |
MsG0780040895.01.T01 | MTR_4g061200 | 63.359 | 131 | 35 | 3 | 61 | 184 | 153 | 277 | 1.44e-35 | 129 |
MsG0780040895.01.T01 | MTR_4g061200 | 63.359 | 131 | 35 | 3 | 61 | 184 | 153 | 277 | 2.39e-35 | 129 |
MsG0780040895.01.T01 | MTR_2g093060 | 56.452 | 124 | 40 | 1 | 61 | 184 | 156 | 265 | 7.86e-27 | 106 |
MsG0780040895.01.T01 | MTR_4g061200 | 54.331 | 127 | 38 | 3 | 61 | 184 | 153 | 262 | 4.36e-24 | 97.8 |
MsG0780040895.01.T01 | MTR_4g061200 | 54.331 | 127 | 38 | 3 | 61 | 184 | 153 | 262 | 5.58e-24 | 98.2 |
MsG0780040895.01.T01 | MTR_8g068510 | 42.029 | 138 | 74 | 2 | 53 | 188 | 159 | 292 | 4.62e-23 | 95.1 |
MsG0780040895.01.T01 | MTR_7g009410 | 41.353 | 133 | 74 | 2 | 59 | 188 | 95 | 226 | 1.25e-22 | 94.0 |
MsG0780040895.01.T01 | MTR_4g127930 | 42.857 | 133 | 71 | 3 | 55 | 184 | 189 | 319 | 5.04e-21 | 90.1 |
MsG0780040895.01.T01 | MTR_8g044070 | 39.695 | 131 | 75 | 2 | 57 | 184 | 83 | 212 | 7.11e-21 | 89.4 |
MsG0780040895.01.T01 | MTR_3g090510 | 57.658 | 111 | 34 | 3 | 67 | 170 | 163 | 267 | 1.54e-20 | 88.2 |
MsG0780040895.01.T01 | MTR_4g065370 | 42.105 | 133 | 72 | 3 | 55 | 184 | 193 | 323 | 1.69e-20 | 88.6 |
MsG0780040895.01.T01 | MTR_4g097520 | 39.130 | 138 | 76 | 3 | 55 | 189 | 340 | 472 | 1.89e-20 | 88.6 |
MsG0780040895.01.T01 | MTR_6g011490 | 40.945 | 127 | 71 | 2 | 65 | 188 | 97 | 222 | 2.12e-20 | 87.8 |
MsG0780040895.01.T01 | MTR_7g080460 | 40.602 | 133 | 74 | 3 | 55 | 184 | 289 | 419 | 3.71e-20 | 87.8 |
MsG0780040895.01.T01 | MTR_3g103460 | 40.602 | 133 | 71 | 3 | 55 | 184 | 340 | 467 | 5.76e-20 | 87.4 |
MsG0780040895.01.T01 | MTR_2g098180 | 41.353 | 133 | 73 | 3 | 55 | 184 | 197 | 327 | 6.01e-20 | 87.0 |
MsG0780040895.01.T01 | MTR_8g020510 | 41.353 | 133 | 70 | 3 | 55 | 184 | 278 | 405 | 6.82e-20 | 87.0 |
MsG0780040895.01.T01 | MTR_1g017400 | 39.850 | 133 | 72 | 3 | 55 | 184 | 342 | 469 | 2.58e-19 | 85.5 |
MsG0780040895.01.T01 | MTR_4g130270 | 37.313 | 134 | 80 | 2 | 54 | 184 | 75 | 207 | 1.09e-18 | 82.8 |
MsG0780040895.01.T01 | MTR_7g060560 | 56.757 | 111 | 34 | 4 | 67 | 170 | 156 | 259 | 2.39e-18 | 82.0 |
MsG0780040895.01.T01 | MTR_5g015070 | 37.037 | 135 | 81 | 2 | 53 | 184 | 276 | 409 | 4.56e-18 | 81.6 |
MsG0780040895.01.T01 | MTR_8g044040 | 37.692 | 130 | 77 | 2 | 58 | 184 | 85 | 213 | 3.28e-15 | 73.2 |
MsG0780040895.01.T01 | MTR_5g031880 | 40.268 | 149 | 75 | 4 | 55 | 194 | 254 | 397 | 6.66e-15 | 72.4 |
MsG0780040895.01.T01 | MTR_4g007770 | 42.857 | 126 | 70 | 1 | 65 | 188 | 72 | 197 | 4.42e-14 | 69.7 |
MsG0780040895.01.T01 | MTR_8g468920 | 41.085 | 129 | 72 | 2 | 59 | 184 | 99 | 226 | 5.00e-14 | 69.7 |
MsG0780040895.01.T01 | MTR_1g049140 | 63.158 | 76 | 27 | 1 | 64 | 139 | 162 | 236 | 1.60e-13 | 67.4 |
MsG0780040895.01.T01 | MTR_1g049140 | 72.581 | 62 | 16 | 1 | 61 | 122 | 159 | 219 | 2.39e-13 | 67.8 |
MsG0780040895.01.T01 | MTR_1g049140 | 72.581 | 62 | 16 | 1 | 61 | 122 | 159 | 219 | 3.90e-13 | 67.0 |
MsG0780040895.01.T01 | MTR_2g460730 | 38.095 | 126 | 76 | 1 | 65 | 188 | 83 | 208 | 3.33e-11 | 61.6 |
MsG0780040895.01.T02 | MTR_7g100590 | 92.105 | 114 | 2 | 1 | 9 | 122 | 304 | 410 | 7.81e-72 | 222 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040895.01.T01 | AT4G36920 | 65.354 | 127 | 39 | 2 | 61 | 184 | 153 | 277 | 2.62e-39 | 139 |
MsG0780040895.01.T01 | AT4G36920 | 65.354 | 127 | 39 | 2 | 61 | 184 | 153 | 277 | 2.62e-39 | 139 |
MsG0780040895.01.T01 | AT5G67180 | 64.567 | 127 | 40 | 2 | 61 | 184 | 118 | 242 | 1.79e-38 | 134 |
MsG0780040895.01.T01 | AT5G67180 | 64.567 | 127 | 40 | 2 | 61 | 184 | 118 | 242 | 1.94e-38 | 135 |
MsG0780040895.01.T01 | AT5G67180 | 64.567 | 127 | 40 | 2 | 61 | 184 | 118 | 242 | 2.19e-38 | 134 |
MsG0780040895.01.T01 | AT2G28550 | 62.879 | 132 | 42 | 2 | 61 | 188 | 175 | 303 | 5.11e-37 | 134 |
MsG0780040895.01.T01 | AT2G28550 | 62.609 | 115 | 30 | 3 | 61 | 168 | 175 | 283 | 1.60e-27 | 106 |
MsG0780040895.01.T01 | AT5G67180 | 61.818 | 110 | 37 | 2 | 64 | 170 | 121 | 228 | 3.36e-27 | 103 |
MsG0780040895.01.T01 | AT2G28550 | 56.250 | 128 | 36 | 3 | 64 | 188 | 12 | 122 | 9.45e-27 | 103 |
MsG0780040895.01.T01 | AT2G28550 | 54.962 | 131 | 39 | 3 | 61 | 188 | 175 | 288 | 1.35e-25 | 102 |
MsG0780040895.01.T01 | AT1G72570 | 40.299 | 134 | 78 | 1 | 53 | 184 | 247 | 380 | 5.39e-22 | 92.4 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 9.15e-22 | 92.4 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 9.30e-22 | 92.0 |
MsG0780040895.01.T01 | AT2G39250 | 62.121 | 66 | 25 | 0 | 61 | 126 | 130 | 195 | 1.32e-21 | 89.0 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 1.34e-21 | 91.3 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 1.34e-21 | 91.3 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 1.34e-21 | 91.3 |
MsG0780040895.01.T01 | AT5G60120 | 48.413 | 126 | 51 | 1 | 61 | 186 | 182 | 293 | 1.39e-21 | 91.7 |
MsG0780040895.01.T01 | AT1G51190 | 40.146 | 137 | 77 | 3 | 55 | 188 | 217 | 351 | 1.71e-21 | 91.7 |
MsG0780040895.01.T01 | AT2G28550 | 80.303 | 66 | 13 | 0 | 61 | 126 | 175 | 240 | 1.80e-21 | 89.0 |
MsG0780040895.01.T01 | AT2G28550 | 80.303 | 66 | 13 | 0 | 61 | 126 | 175 | 240 | 1.80e-21 | 89.0 |
MsG0780040895.01.T01 | AT2G39250 | 62.121 | 66 | 25 | 0 | 61 | 126 | 130 | 195 | 1.90e-21 | 90.1 |
MsG0780040895.01.T01 | AT5G57390 | 40.741 | 135 | 75 | 3 | 53 | 184 | 110 | 242 | 1.12e-20 | 89.0 |
MsG0780040895.01.T01 | AT5G57390 | 40.741 | 135 | 75 | 3 | 53 | 184 | 228 | 360 | 1.36e-20 | 89.0 |
MsG0780040895.01.T01 | AT3G20840 | 39.850 | 133 | 75 | 3 | 55 | 184 | 208 | 338 | 3.50e-20 | 87.8 |
MsG0780040895.01.T01 | AT5G17430 | 40.602 | 133 | 74 | 3 | 55 | 184 | 175 | 305 | 1.03e-19 | 86.7 |
MsG0780040895.01.T01 | AT5G17430 | 40.000 | 135 | 76 | 3 | 53 | 184 | 235 | 367 | 1.08e-19 | 86.7 |
MsG0780040895.01.T01 | AT4G37750 | 41.129 | 124 | 69 | 2 | 64 | 184 | 318 | 440 | 1.69e-19 | 85.9 |
MsG0780040895.01.T01 | AT5G65510 | 43.066 | 137 | 73 | 3 | 55 | 188 | 258 | 392 | 1.72e-15 | 74.3 |
MsG0780040895.01.T01 | AT5G65510 | 43.066 | 137 | 73 | 3 | 55 | 188 | 258 | 392 | 1.72e-15 | 74.3 |
MsG0780040895.01.T01 | AT5G65510 | 43.066 | 137 | 73 | 3 | 55 | 188 | 200 | 334 | 1.76e-15 | 74.3 |
MsG0780040895.01.T01 | AT5G65510 | 50.000 | 74 | 36 | 1 | 53 | 126 | 198 | 270 | 5.06e-15 | 72.0 |
MsG0780040895.01.T01 | AT5G10510 | 40.146 | 137 | 77 | 3 | 55 | 188 | 295 | 429 | 5.70e-14 | 70.1 |
MsG0780040895.01.T01 | AT5G10510 | 40.146 | 137 | 77 | 3 | 55 | 188 | 295 | 429 | 5.70e-14 | 70.1 |
MsG0780040895.01.T01 | AT3G54320 | 38.931 | 131 | 78 | 1 | 56 | 184 | 92 | 222 | 6.05e-14 | 69.7 |
MsG0780040895.01.T01 | AT5G10510 | 40.146 | 137 | 77 | 3 | 55 | 188 | 257 | 391 | 6.39e-14 | 69.7 |
MsG0780040895.01.T01 | AT5G10510 | 40.146 | 137 | 77 | 3 | 55 | 188 | 257 | 391 | 6.39e-14 | 69.7 |
MsG0780040895.01.T01 | AT3G54320 | 38.931 | 131 | 78 | 1 | 56 | 184 | 92 | 222 | 6.60e-14 | 69.7 |
MsG0780040895.01.T01 | AT5G10510 | 40.146 | 137 | 77 | 3 | 55 | 188 | 280 | 414 | 7.53e-14 | 69.7 |
MsG0780040895.01.T01 | AT3G54320 | 40.323 | 124 | 70 | 2 | 64 | 184 | 34 | 156 | 2.59e-13 | 67.8 |
MsG0780040895.01.T01 | AT3G54320 | 40.323 | 124 | 70 | 2 | 64 | 184 | 34 | 156 | 2.59e-13 | 67.8 |
MsG0780040895.01.T01 | AT5G10510 | 39.416 | 137 | 75 | 3 | 55 | 188 | 257 | 388 | 3.02e-13 | 67.8 |
MsG0780040895.01.T01 | AT3G54990 | 70.968 | 62 | 18 | 0 | 64 | 125 | 147 | 208 | 5.30e-13 | 65.9 |
MsG0780040895.01.T01 | AT3G54990 | 47.059 | 119 | 48 | 2 | 61 | 178 | 144 | 248 | 5.70e-13 | 66.6 |
MsG0780040895.01.T01 | AT5G10510 | 39.200 | 125 | 72 | 2 | 67 | 188 | 326 | 449 | 3.29e-12 | 64.7 |
Find 68 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCAATGTTCAGTCATCTTA+TGG | 0.249805 | 7:+83962746 | MsG0780040895.01.T01:three_prime_UTR |
GTTTGCAAGTTCAGCGTAAC+TGG | 0.251291 | 7:+83962543 | MsG0780040895.01.T01:three_prime_UTR |
GCTCGTATGGGACAGTTTCT+TGG | 0.328646 | 7:+83961804 | MsG0780040895.01.T01:CDS |
CGTTGATAGTTTGAGGACTC+TGG | 0.357542 | 7:+83962713 | MsG0780040895.01.T01:intron |
TTATGTAGGTATATATATCT+TGG | 0.380122 | 7:+83961964 | MsG0780040895.01.T01:intron |
CTGAGCATCAACCTCCAATC+TGG | 0.386362 | 7:+83962783 | MsG0780040895.01.T01:three_prime_UTR |
AGCGTTGTTGTTGTTGAGTA+TGG | 0.389862 | 7:-83960706 | None:intergenic |
ACCATTACACTCTTATCAAC+AGG | 0.390876 | 7:-83962575 | None:intergenic |
AGACAGAGTACTGGTTTCTC+AGG | 0.412151 | 7:+83961731 | MsG0780040895.01.T01:CDS |
TAATTACTTTCCCGTGTGTA+AGG | 0.413461 | 7:+83962814 | MsG0780040895.01.T01:three_prime_UTR |
TATGTAGGTATATATATCTT+GGG | 0.414146 | 7:+83961965 | MsG0780040895.01.T01:intron |
GTGGACGATGGGAGCTCGTA+TGG | 0.433900 | 7:+83961791 | MsG0780040895.01.T01:CDS |
CACTATCTCCGTCGTTCAGA+TGG | 0.448203 | 7:+83960592 | MsG0780040895.01.T01:CDS |
ATTTGAACATCAGAGTTAGA+AGG | 0.449742 | 7:-83962494 | None:intergenic |
GCAGAATCTTGATCTGAACT+TGG | 0.465184 | 7:+83962460 | MsG0780040895.01.T01:three_prime_UTR |
CATCTGAACGACGGAGATAG+TGG | 0.488727 | 7:-83960591 | None:intergenic |
TTTGAGGCTAGTTCTTATGA+AGG | 0.495376 | 7:+83962203 | MsG0780040895.01.T01:CDS |
ACTGAAGATTCATGCTCTTA+CGG | 0.496241 | 7:+83960661 | MsG0780040895.01.T01:CDS |
TAGTACCATCGTTATCAGCC+TGG | 0.496630 | 7:-83962238 | None:intergenic |
TGCTCTTACGGCGATGCATA+CGG | 0.502837 | 7:+83960673 | MsG0780040895.01.T01:CDS |
TAATTAGTACCACTCCAGAT+TGG | 0.520137 | 7:-83962797 | None:intergenic |
AACATGCACCACAGTGGAAG+TGG | 0.520906 | 7:+83962521 | MsG0780040895.01.T01:three_prime_UTR |
TGAAGGAGAGTTAACTTCCC+AGG | 0.523464 | 7:+83962220 | MsG0780040895.01.T01:exon |
AGGTTGATGCTCAGATGCTA+TGG | 0.530023 | 7:-83962774 | None:intergenic |
CTGCTATAAAATGCAATGGA+AGG | 0.535486 | 7:+83962166 | MsG0780040895.01.T01:CDS |
GACTGAGGAATCAAAGCTAC+CGG | 0.545116 | 7:-83960624 | None:intergenic |
AACGACGGAGATAGTGGAAG+AGG | 0.550345 | 7:-83960585 | None:intergenic |
GTTGATAGTTTGAGGACTCT+GGG | 0.550553 | 7:+83962714 | MsG0780040895.01.T01:intron |
GGTAGCTTTGATTCCTCAGT+CGG | 0.552564 | 7:+83960626 | MsG0780040895.01.T01:CDS |
TGATTACAGAGCGTATGATA+AGG | 0.555672 | 7:+83962143 | MsG0780040895.01.T01:intron |
TTATGATGAAGATATAAAGC+AGG | 0.557521 | 7:+83961480 | MsG0780040895.01.T01:CDS |
ATTCTGCGTAGACAGAGTAC+TGG | 0.571541 | 7:+83961722 | MsG0780040895.01.T01:CDS |
GACAGAGTACTGGTTTCTCA+GGG | 0.572858 | 7:+83961732 | MsG0780040895.01.T01:CDS |
GTTCAGATGGAAGATTCATC+CGG | 0.575771 | 7:+83960605 | MsG0780040895.01.T01:CDS |
CGAGCTGCGATAAAGTTTCG+TGG | 0.575785 | 7:+83961424 | MsG0780040895.01.T01:CDS |
TGGACGATGGGAGCTCGTAT+GGG | 0.577301 | 7:+83961792 | MsG0780040895.01.T01:CDS |
TGCTATAAAATGCAATGGAA+GGG | 0.577688 | 7:+83962167 | MsG0780040895.01.T01:CDS |
TTACCTTGCCGCAGCATGCG+CGG | 0.580853 | 7:-83961293 | None:intergenic |
ATACCGCGCATGCTGCGGCA+AGG | 0.583419 | 7:+83961290 | MsG0780040895.01.T01:CDS |
CAGAATCTTGATCTGAACTT+GGG | 0.584312 | 7:+83962461 | MsG0780040895.01.T01:three_prime_UTR |
AAGGCTGCTATAAAATGCAA+TGG | 0.584344 | 7:+83962162 | MsG0780040895.01.T01:CDS |
TTAGTACCACTCCAGATTGG+AGG | 0.585536 | 7:-83962794 | None:intergenic |
TGTCGGCAGCGTTCCGACTG+AGG | 0.587957 | 7:-83960639 | None:intergenic |
TTTGCAAGTTCAGCGTAACT+GGG | 0.588454 | 7:+83962544 | MsG0780040895.01.T01:three_prime_UTR |
TCTGCATAAATGTGGACGAT+GGG | 0.589018 | 7:+83961780 | MsG0780040895.01.T01:CDS |
AGTACCATCGTTATCAGCCT+GGG | 0.589962 | 7:-83962237 | None:intergenic |
ATAGCGAGCTAGATGCTGCA+AGG | 0.598807 | 7:+83961995 | MsG0780040895.01.T01:CDS |
ATTTGATACCGCGCATGCTG+CGG | 0.600999 | 7:+83961285 | MsG0780040895.01.T01:CDS |
AAAGTTTCGTGGCGTCGATG+CGG | 0.606313 | 7:+83961435 | MsG0780040895.01.T01:CDS |
ATTAGTATTCACCTTACACA+CGG | 0.613966 | 7:-83962825 | None:intergenic |
TGAACATCAGAGTTAGAAGG+AGG | 0.614498 | 7:-83962491 | None:intergenic |
GCCTGTTGATAAGAGTGTAA+TGG | 0.619307 | 7:+83962574 | MsG0780040895.01.T01:three_prime_UTR |
AACAACGCTTCCGTCGACAA+CGG | 0.620133 | 7:+83960720 | MsG0780040895.01.T01:CDS |
GGAGTTACTCTGCATAAATG+TGG | 0.624873 | 7:+83961772 | MsG0780040895.01.T01:CDS |
CGTCGACAACGGTACTATCA+CGG | 0.625181 | 7:+83960731 | MsG0780040895.01.T01:CDS |
CTCTGCATAAATGTGGACGA+TGG | 0.629073 | 7:+83961779 | MsG0780040895.01.T01:CDS |
GTAGATGAATAACTTTACAA+AGG | 0.633971 | 7:+83961685 | MsG0780040895.01.T01:intron |
AGAGCATGAATCTTCAGTGT+CGG | 0.641138 | 7:-83960656 | None:intergenic |
GGTTGATGCTCAGATGCTAT+GGG | 0.641889 | 7:-83962773 | None:intergenic |
CGTGATAGTACCGTTGTCGA+CGG | 0.646466 | 7:-83960730 | None:intergenic |
CATCAACCTCCAATCTGGAG+TGG | 0.662314 | 7:+83962788 | MsG0780040895.01.T01:three_prime_UTR |
TTAGTATTCACCTTACACAC+GGG | 0.680796 | 7:-83962824 | None:intergenic |
TGAATCTTCCATCTGAACGA+CGG | 0.683792 | 7:-83960600 | None:intergenic |
AGGGGAAGTTCTAAATACAG+AGG | 0.690616 | 7:+83961751 | MsG0780040895.01.T01:CDS |
ACTTCCCAGGCTGATAACGA+TGG | 0.728400 | 7:+83962233 | MsG0780040895.01.T01:exon |
ATGATGAACATGCACCACAG+TGG | 0.729813 | 7:+83962515 | MsG0780040895.01.T01:three_prime_UTR |
CTTGCAAACCACTTCCACTG+TGG | 0.732557 | 7:-83962529 | None:intergenic |
ACAGAGTACTGGTTTCTCAG+GGG | 0.737307 | 7:+83961733 | MsG0780040895.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATCAAATTAAACTAA+AGG | - | Chr7:83961845-83961864 | None:intergenic | 10.0% |
!!! | TATTTAGTTCTTAATTATAT+TGG | + | Chr7:83961912-83961931 | MsG0780040895.01.T01:intron | 10.0% |
!! | AAAGATCAAAATCTAAAAAA+AGG | - | Chr7:83961244-83961263 | None:intergenic | 15.0% |
!! | AAGAAAATAGGAATATTTAA+AGG | - | Chr7:83963367-83963386 | None:intergenic | 15.0% |
!! | ATGATCCAAAATATTTAATT+AGG | - | Chr7:83962066-83962085 | None:intergenic | 15.0% |
!! | TATAATTAAGAACTAAATAC+TGG | - | Chr7:83961911-83961930 | None:intergenic | 15.0% |
!! | TGATTATAAAACCAAAAAAA+AGG | - | Chr7:83962285-83962304 | None:intergenic | 15.0% |
!!! | AAATGCCTAATTAAATATTT+TGG | + | Chr7:83962058-83962077 | MsG0780040895.01.T01:intron | 15.0% |
!!! | TAAATATTGAATGTTTTTCA+TGG | + | Chr7:83961355-83961374 | MsG0780040895.01.T01:intron | 15.0% |
!!! | TCTTTGAAATTTAATTTTTC+AGG | + | Chr7:83961259-83961278 | MsG0780040895.01.T01:intron | 15.0% |
!! | ATTTATCAATCATATATAGC+AGG | + | Chr7:83962023-83962042 | MsG0780040895.01.T01:intron | 20.0% |
!! | TATGTAGGTATATATATCTT+GGG | + | Chr7:83961965-83961984 | MsG0780040895.01.T01:intron | 20.0% |
!! | TTATGTAGGTATATATATCT+TGG | + | Chr7:83961964-83961983 | MsG0780040895.01.T01:intron | 20.0% |
!!! | GTTTTTAATTATATTGGTCT+GGG | + | Chr7:83961940-83961959 | MsG0780040895.01.T01:intron | 20.0% |
!!! | TTATTTTGTGTTCTATTTAC+AGG | + | Chr7:83962943-83962962 | MsG0780040895.01.T01:intron | 20.0% |
!!! | TTGAAATTTAATTTTTCAGG+TGG | + | Chr7:83961262-83961281 | MsG0780040895.01.T01:intron | 20.0% |
! | AAAGTAGGAATTTAATTGCT+TGG | + | Chr7:83963315-83963334 | MsG0780040895.01.T01:three_prime_UTR | 25.0% |
! | AAAGTTGACCCATTATTATA+TGG | - | Chr7:83963033-83963052 | None:intergenic | 25.0% |
! | AAATCACAAATCAGTCATTT+AGG | - | Chr7:83961875-83961894 | None:intergenic | 25.0% |
! | AATATGATCATCAAACTTGT+AGG | + | Chr7:83963287-83963306 | MsG0780040895.01.T01:three_prime_UTR | 25.0% |
! | AGGTTAATTGACATACTTTA+AGG | - | Chr7:83962368-83962387 | None:intergenic | 25.0% |
! | AGTTCTTAATTATATTGGTC+TGG | + | Chr7:83961917-83961936 | MsG0780040895.01.T01:intron | 25.0% |
! | ATATGATCATCAAACTTGTA+GGG | + | Chr7:83963288-83963307 | MsG0780040895.01.T01:three_prime_UTR | 25.0% |
! | ATATTTCAGTAAGAAATGCA+TGG | - | Chr7:83963502-83963521 | None:intergenic | 25.0% |
! | GTAGATGAATAACTTTACAA+AGG | + | Chr7:83961685-83961704 | MsG0780040895.01.T01:intron | 25.0% |
! | TTAACCTTTACTATTAAGAC+TGG | + | Chr7:83962381-83962400 | MsG0780040895.01.T01:intron | 25.0% |
! | TTATGATGAAGATATAAAGC+AGG | + | Chr7:83961480-83961499 | MsG0780040895.01.T01:CDS | 25.0% |
! | TTTATGAGATGATTCTAATG+AGG | + | Chr7:83963441-83963460 | MsG0780040895.01.T01:three_prime_UTR | 25.0% |
!! | GTTCTTAATTATATTGGTCT+GGG | + | Chr7:83961918-83961937 | MsG0780040895.01.T01:intron | 25.0% |
!! | TACTGAAATATTTGAGATGA+TGG | + | Chr7:83963511-83963530 | MsG0780040895.01.T01:three_prime_UTR | 25.0% |
!!! | AAGAACTAAATACTGGTTTA+TGG | - | Chr7:83961904-83961923 | None:intergenic | 25.0% |
!!! | GGTTTTTAATTATATTGGTC+TGG | + | Chr7:83961939-83961958 | MsG0780040895.01.T01:intron | 25.0% |
!!! | GTCTGGGTTTTTAATTATAT+TGG | + | Chr7:83961934-83961953 | MsG0780040895.01.T01:intron | 25.0% |
!!! | TTTTTTACACGGAAGAAAAT+AGG | - | Chr7:83963379-83963398 | None:intergenic | 25.0% |
ATATCTTAAGAATCTTCTGC+TGG | + | Chr7:83962907-83962926 | MsG0780040895.01.T01:intron | 30.0% | |
ATCACCAGTCTTAATAGTAA+AGG | - | Chr7:83962388-83962407 | None:intergenic | 30.0% | |
ATGATAACAAAGGAAGGAAA+TGG | - | Chr7:83963470-83963489 | None:intergenic | 30.0% | |
ATGATCATATTCCTAAACCT+TGG | - | Chr7:83963278-83963297 | None:intergenic | 30.0% | |
ATTAGTATTCACCTTACACA+CGG | - | Chr7:83962828-83962847 | None:intergenic | 30.0% | |
ATTTGAACATCAGAGTTAGA+AGG | - | Chr7:83962497-83962516 | None:intergenic | 30.0% | |
CTCCAAGTCCATATAATAAT+GGG | + | Chr7:83963022-83963041 | MsG0780040895.01.T01:three_prime_UTR | 30.0% | |
GAGAGTGAAAATGATAACAA+AGG | - | Chr7:83963480-83963499 | None:intergenic | 30.0% | |
GTGAAAATGATAACAAAGGA+AGG | - | Chr7:83963476-83963495 | None:intergenic | 30.0% | |
TGCTATAAAATGCAATGGAA+GGG | + | Chr7:83962167-83962186 | MsG0780040895.01.T01:CDS | 30.0% | |
TGTGGAAAACAAGTATACTT+AGG | + | Chr7:83961145-83961164 | MsG0780040895.01.T01:intron | 30.0% | |
! | AATATTTGAGATGATGGTGA+AGG | + | Chr7:83963517-83963536 | MsG0780040895.01.T01:three_prime_UTR | 30.0% |
! | TTGATAAGAGTGTAATGGTA+AGG | + | Chr7:83962579-83962598 | MsG0780040895.01.T01:intron | 30.0% |
!! | GAATTGTAGCTTTATACTCT+AGG | - | Chr7:83963225-83963244 | None:intergenic | 30.0% |
!!! | CTGTTTTCGTTTTTTCTGTA+GGG | + | Chr7:83961120-83961139 | MsG0780040895.01.T01:intron | 30.0% |
!!! | TCTGTTTTCGTTTTTTCTGT+AGG | + | Chr7:83961119-83961138 | MsG0780040895.01.T01:intron | 30.0% |
AAAAAAAAGGTGAGCCTCAA+TGG | - | Chr7:83962272-83962291 | None:intergenic | 35.0% | |
AACTTGTAGGGTCTAAAAGT+AGG | + | Chr7:83963300-83963319 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
AAGAGCAATAGAGAATAGGA+TGG | + | Chr7:83962967-83962986 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
AAGGCTGCTATAAAATGCAA+TGG | + | Chr7:83962162-83962181 | MsG0780040895.01.T01:CDS | 35.0% | |
AATTCATGTGAAAGAGCAGA+GGG | - | Chr7:83962651-83962670 | None:intergenic | 35.0% | |
ACCATTACACTCTTATCAAC+AGG | - | Chr7:83962578-83962597 | None:intergenic | 35.0% | |
ACTGAAGATTCATGCTCTTA+CGG | + | Chr7:83960661-83960680 | MsG0780040895.01.T01:CDS | 35.0% | |
AGGAAAGAGCAATAGAGAAT+AGG | + | Chr7:83962963-83962982 | MsG0780040895.01.T01:intron | 35.0% | |
AGTCTTTGTATCCAAGGTTT+AGG | + | Chr7:83963264-83963283 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
ATTTGGTTAGCATTTCGCAA+TGG | + | Chr7:83961023-83961042 | MsG0780040895.01.T01:intron | 35.0% | |
CAGAAAAAACGAAAACAGAG+TGG | - | Chr7:83961118-83961137 | None:intergenic | 35.0% | |
CAGAATCTTGATCTGAACTT+GGG | + | Chr7:83962461-83962480 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
CTCAATGTTCAGTCATCTTA+TGG | + | Chr7:83962746-83962765 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
CTGCTATAAAATGCAATGGA+AGG | + | Chr7:83962166-83962185 | MsG0780040895.01.T01:CDS | 35.0% | |
GACCCATTATTATATGGACT+TGG | - | Chr7:83963027-83963046 | None:intergenic | 35.0% | |
GCTCCAAGTCCATATAATAA+TGG | + | Chr7:83963021-83963040 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
GTACTACTTATTGACCATTG+AGG | + | Chr7:83962255-83962274 | MsG0780040895.01.T01:intron | 35.0% | |
TAATTACTTTCCCGTGTGTA+AGG | + | Chr7:83962814-83962833 | MsG0780040895.01.T01:three_prime_UTR | 35.0% | |
TAATTAGTACCACTCCAGAT+TGG | - | Chr7:83962800-83962819 | None:intergenic | 35.0% | |
TGATTACAGAGCGTATGATA+AGG | + | Chr7:83962143-83962162 | MsG0780040895.01.T01:intron | 35.0% | |
TTAGTATTCACCTTACACAC+GGG | - | Chr7:83962827-83962846 | None:intergenic | 35.0% | |
! | ATATTGGTCTGGGTTTATGT+AGG | + | Chr7:83961950-83961969 | MsG0780040895.01.T01:intron | 35.0% |
! | TACGTGTTGTGTTATTGACT+TGG | + | Chr7:83962108-83962127 | MsG0780040895.01.T01:intron | 35.0% |
! | TTTGAGGCTAGTTCTTATGA+AGG | + | Chr7:83962203-83962222 | MsG0780040895.01.T01:CDS | 35.0% |
!! | GAGAGTGAGTGATAGTTTTA+TGG | - | Chr7:83962332-83962351 | None:intergenic | 35.0% |
!! | TAATCTGCGTTGATAGTTTG+AGG | + | Chr7:83962706-83962725 | MsG0780040895.01.T01:intron | 35.0% |
!!! | ATTGAGGCTCACCTTTTTTT+TGG | + | Chr7:83962271-83962290 | MsG0780040895.01.T01:intron | 35.0% |
AATTTCTCGTCCGATCATCA+CGG | + | Chr7:83960861-83960880 | MsG0780040895.01.T01:intron | 40.0% | |
AGAGCATGAATCTTCAGTGT+CGG | - | Chr7:83960659-83960678 | None:intergenic | 40.0% | |
ATTCATGTGAAAGAGCAGAG+GGG | - | Chr7:83962650-83962669 | None:intergenic | 40.0% | |
GAATTCATGTGAAAGAGCAG+AGG | - | Chr7:83962652-83962671 | None:intergenic | 40.0% | |
GCAGAATCTTGATCTGAACT+TGG | + | Chr7:83962460-83962479 | MsG0780040895.01.T01:three_prime_UTR | 40.0% | |
GGAGTTACTCTGCATAAATG+TGG | + | Chr7:83961772-83961791 | MsG0780040895.01.T01:CDS | 40.0% | |
GTTCAGATGGAAGATTCATC+CGG | + | Chr7:83960605-83960624 | MsG0780040895.01.T01:CDS | 40.0% | |
TAAAAAAAATCCCTGCCGCA+AGG | + | Chr7:83963392-83963411 | MsG0780040895.01.T01:three_prime_UTR | 40.0% | |
TCTGCATAAATGTGGACGAT+GGG | + | Chr7:83961780-83961799 | MsG0780040895.01.T01:CDS | 40.0% | |
TGAACATCAGAGTTAGAAGG+AGG | - | Chr7:83962494-83962513 | None:intergenic | 40.0% | |
TGAATCTTCCATCTGAACGA+CGG | - | Chr7:83960603-83960622 | None:intergenic | 40.0% | |
TTTGCAAGTTCAGCGTAACT+GGG | + | Chr7:83962544-83962563 | MsG0780040895.01.T01:three_prime_UTR | 40.0% | |
! | ACGTCTAGTCTTTGTATCCA+AGG | + | Chr7:83963258-83963277 | MsG0780040895.01.T01:three_prime_UTR | 40.0% |
! | AGCGTTGTTGTTGTTGAGTA+TGG | - | Chr7:83960709-83960728 | None:intergenic | 40.0% |
! | CTTTTCCAGCAAAACGAATC+GGG | + | Chr7:83960804-83960823 | MsG0780040895.01.T01:intron | 40.0% |
! | GCCTGTTGATAAGAGTGTAA+TGG | + | Chr7:83962574-83962593 | MsG0780040895.01.T01:three_prime_UTR | 40.0% |
! | GCTTTTCCAGCAAAACGAAT+CGG | + | Chr7:83960803-83960822 | MsG0780040895.01.T01:intron | 40.0% |
! | GGGAAGCAGTTACAATTTTG+AGG | + | Chr7:83962187-83962206 | MsG0780040895.01.T01:CDS | 40.0% |
!! | AGGGGAAGTTCTAAATACAG+AGG | + | Chr7:83961751-83961770 | MsG0780040895.01.T01:CDS | 40.0% |
!! | GTTGATAGTTTGAGGACTCT+GGG | + | Chr7:83962714-83962733 | MsG0780040895.01.T01:intron | 40.0% |
!!! | CGGCAGGGATTTTTTTTACA+CGG | - | Chr7:83963390-83963409 | None:intergenic | 40.0% |
!!! | CGTTTTTTCTGTAGGGATTG+TGG | + | Chr7:83961127-83961146 | MsG0780040895.01.T01:intron | 40.0% |
AATCTGCTCCCGTTCCAAAT+TGG | + | Chr7:83962990-83963009 | MsG0780040895.01.T01:three_prime_UTR | 45.0% | |
ACTTTCGTTCTACCGAGAAC+TGG | + | Chr7:83960985-83961004 | MsG0780040895.01.T01:intron | 45.0% | |
AGTACCATCGTTATCAGCCT+GGG | - | Chr7:83962240-83962259 | None:intergenic | 45.0% | |
ATCCATCCTCTACTCTCAGA+AGG | - | Chr7:83960840-83960859 | None:intergenic | 45.0% | |
ATCTGCTCCCGTTCCAAATT+GGG | + | Chr7:83962991-83963010 | MsG0780040895.01.T01:three_prime_UTR | 45.0% | |
ATGATGAACATGCACCACAG+TGG | + | Chr7:83962515-83962534 | MsG0780040895.01.T01:three_prime_UTR | 45.0% | |
ATTCCCTTCAACAACAGCTG+CGG | + | Chr7:83963089-83963108 | MsG0780040895.01.T01:three_prime_UTR | 45.0% | |
ATTCTGCGTAGACAGAGTAC+TGG | + | Chr7:83961722-83961741 | MsG0780040895.01.T01:CDS | 45.0% | |
CTAGAGTTTACCATGCCTTG+CGG | - | Chr7:83963410-83963429 | None:intergenic | 45.0% | |
CTCTGCATAAATGTGGACGA+TGG | + | Chr7:83961779-83961798 | MsG0780040895.01.T01:CDS | 45.0% | |
CTCTTCTTCACCTGCTTAGT+CGG | - | Chr7:83960918-83960937 | None:intergenic | 45.0% | |
GACTGAGGAATCAAAGCTAC+CGG | - | Chr7:83960627-83960646 | None:intergenic | 45.0% | |
GATGCTGCAGCAGAGAAATT+AGG | - | Chr7:83963063-83963082 | None:intergenic | 45.0% | |
GTTTGCAAGTTCAGCGTAAC+TGG | + | Chr7:83962543-83962562 | MsG0780040895.01.T01:three_prime_UTR | 45.0% | |
TAGTACCATCGTTATCAGCC+TGG | - | Chr7:83962241-83962260 | None:intergenic | 45.0% | |
TATCCGCAGCTGTTGTTGAA+GGG | - | Chr7:83963095-83963114 | None:intergenic | 45.0% | |
TCGCTGGAGTAGGAAAATGA+GGG | - | Chr7:83963151-83963170 | None:intergenic | 45.0% | |
TCTTCTTCACCTGCTTAGTC+GGG | - | Chr7:83960917-83960936 | None:intergenic | 45.0% | |
TGAAGGAGAGTTAACTTCCC+AGG | + | Chr7:83962220-83962239 | MsG0780040895.01.T01:exon | 45.0% | |
TTAGTACCACTCCAGATTGG+AGG | - | Chr7:83962797-83962816 | None:intergenic | 45.0% | |
! | AGGGTGGAGGTATGTTATGT+TGG | - | Chr7:83963132-83963151 | None:intergenic | 45.0% |
! | GGTTGATGCTCAGATGCTAT+GGG | - | Chr7:83962776-83962795 | None:intergenic | 45.0% |
!! | ACAGAGTACTGGTTTCTCAG+GGG | + | Chr7:83961733-83961752 | MsG0780040895.01.T01:CDS | 45.0% |
!! | AGACAGAGTACTGGTTTCTC+AGG | + | Chr7:83961731-83961750 | MsG0780040895.01.T01:CDS | 45.0% |
!! | AGGTTGATGCTCAGATGCTA+TGG | - | Chr7:83962777-83962796 | None:intergenic | 45.0% |
!! | CGTTGATAGTTTGAGGACTC+TGG | + | Chr7:83962713-83962732 | MsG0780040895.01.T01:intron | 45.0% |
!! | GACAGAGTACTGGTTTCTCA+GGG | + | Chr7:83961732-83961751 | MsG0780040895.01.T01:CDS | 45.0% |
!! | GGTAGCTTTGATTCCTCAGT+CGG | + | Chr7:83960626-83960645 | MsG0780040895.01.T01:CDS | 45.0% |
!! | TCATTCCCGATTCGTTTTGC+TGG | - | Chr7:83960812-83960831 | None:intergenic | 45.0% |
AACAACGCTTCCGTCGACAA+CGG | + | Chr7:83960720-83960739 | MsG0780040895.01.T01:CDS | 50.0% | |
AACATGCACCACAGTGGAAG+TGG | + | Chr7:83962521-83962540 | MsG0780040895.01.T01:three_prime_UTR | 50.0% | |
ACGGTGAGCTTCAAACACTC+CGG | + | Chr7:83960750-83960769 | MsG0780040895.01.T01:intron | 50.0% | |
AGGTGAAGAAGAGTCGTCGT+CGG | + | Chr7:83960925-83960944 | MsG0780040895.01.T01:intron | 50.0% | |
ATAGCGAGCTAGATGCTGCA+AGG | + | Chr7:83961995-83962014 | MsG0780040895.01.T01:CDS | 50.0% | |
ATCAGCTCCGCAGTAGAAAG+AGG | - | Chr7:83963192-83963211 | None:intergenic | 50.0% | |
ATTTGATACCGCGCATGCTG+CGG | + | Chr7:83961285-83961304 | MsG0780040895.01.T01:CDS | 50.0% | |
CACTATCTCCGTCGTTCAGA+TGG | + | Chr7:83960592-83960611 | MsG0780040895.01.T01:CDS | 50.0% | |
CATCAACCTCCAATCTGGAG+TGG | + | Chr7:83962788-83962807 | MsG0780040895.01.T01:three_prime_UTR | 50.0% | |
CATCTGAACGACGGAGATAG+TGG | - | Chr7:83960594-83960613 | None:intergenic | 50.0% | |
CCCATACCCTCTTTCTACTG+CGG | + | Chr7:83963182-83963201 | MsG0780040895.01.T01:three_prime_UTR | 50.0% | |
CGAGCTGCGATAAAGTTTCG+TGG | + | Chr7:83961424-83961443 | MsG0780040895.01.T01:CDS | 50.0% | |
CGTCGACAACGGTACTATCA+CGG | + | Chr7:83960731-83960750 | MsG0780040895.01.T01:CDS | 50.0% | |
CGTGATAGTACCGTTGTCGA+CGG | - | Chr7:83960733-83960752 | None:intergenic | 50.0% | |
CTATCCGCAGCTGTTGTTGA+AGG | - | Chr7:83963096-83963115 | None:intergenic | 50.0% | |
CTGAGCATCAACCTCCAATC+TGG | + | Chr7:83962783-83962802 | MsG0780040895.01.T01:three_prime_UTR | 50.0% | |
CTGCCATGCCCAATTTGGAA+CGG | - | Chr7:83963002-83963021 | None:intergenic | 50.0% | |
CTGGAGTAGGAAAATGAGGG+TGG | - | Chr7:83963148-83963167 | None:intergenic | 50.0% | |
CTTGCAAACCACTTCCACTG+TGG | - | Chr7:83962532-83962551 | None:intergenic | 50.0% | |
GAGTAGGAAAATGAGGGTGG+AGG | - | Chr7:83963145-83963164 | None:intergenic | 50.0% | |
GCTCGTATGGGACAGTTTCT+TGG | + | Chr7:83961804-83961823 | MsG0780040895.01.T01:CDS | 50.0% | |
GCTGCAGCAGAGAAATTAGG+TGG | - | Chr7:83963060-83963079 | None:intergenic | 50.0% | |
GGACGTTGGGATCGCATATT+TGG | + | Chr7:83961006-83961025 | MsG0780040895.01.T01:intron | 50.0% | |
GTCGCTGGAGTAGGAAAATG+AGG | - | Chr7:83963152-83963171 | None:intergenic | 50.0% | |
TCAGCTCCGCAGTAGAAAGA+GGG | - | Chr7:83963191-83963210 | None:intergenic | 50.0% | |
TCCGCAGTAGAAAGAGGGTA+TGG | - | Chr7:83963186-83963205 | None:intergenic | 50.0% | |
TCTACCGAGAACTGGACGTT+GGG | + | Chr7:83960993-83961012 | MsG0780040895.01.T01:intron | 50.0% | |
TGCTCTTACGGCGATGCATA+CGG | + | Chr7:83960673-83960692 | MsG0780040895.01.T01:CDS | 50.0% | |
TTCTACCGAGAACTGGACGT+TGG | + | Chr7:83960992-83961011 | MsG0780040895.01.T01:intron | 50.0% | |
TTCTCTGCTGCAGCATCATC+AGG | + | Chr7:83963066-83963085 | MsG0780040895.01.T01:three_prime_UTR | 50.0% | |
! | ACTTCCCAGGCTGATAACGA+TGG | + | Chr7:83962233-83962252 | MsG0780040895.01.T01:exon | 50.0% |
! | CCGCAGTAGAAAGAGGGTAT+GGG | - | Chr7:83963185-83963204 | None:intergenic | 50.0% |
! | CGCAGTAGAAAGAGGGTATG+GGG | - | Chr7:83963184-83963203 | None:intergenic | 50.0% |
! | TGCCATGCCCAATTTGGAAC+GGG | - | Chr7:83963001-83963020 | None:intergenic | 50.0% |
!! | AAAGTTTCGTGGCGTCGATG+CGG | + | Chr7:83961435-83961454 | MsG0780040895.01.T01:CDS | 50.0% |
!! | AACGACGGAGATAGTGGAAG+AGG | - | Chr7:83960588-83960607 | None:intergenic | 50.0% |
AAAATCCCTGCCGCAAGGCA+TGG | + | Chr7:83963397-83963416 | MsG0780040895.01.T01:three_prime_UTR | 55.0% | |
AGTTTACCATGCCTTGCGGC+AGG | - | Chr7:83963406-83963425 | None:intergenic | 55.0% | |
CGATCCCAACGTCCAGTTCT+CGG | - | Chr7:83961000-83961019 | None:intergenic | 55.0% | |
CTCCCGTTCCAAATTGGGCA+TGG | + | Chr7:83962996-83963015 | MsG0780040895.01.T01:three_prime_UTR | 55.0% | |
CTGGAGTTAGTCGCTGGAGT+AGG | - | Chr7:83963161-83963180 | None:intergenic | 55.0% | |
GTTGTTGCTCCCGACTAAGC+AGG | + | Chr7:83960905-83960924 | MsG0780040895.01.T01:intron | 55.0% | |
GTTTACCATGCCTTGCGGCA+GGG | - | Chr7:83963405-83963424 | None:intergenic | 55.0% | |
TCACGAAGCTCGCAGTATCG+TGG | + | Chr7:83960958-83960977 | MsG0780040895.01.T01:intron | 55.0% | |
TCCTCTACTCTCAGAAGGCG+AGG | - | Chr7:83960835-83960854 | None:intergenic | 55.0% | |
TGGACGATGGGAGCTCGTAT+GGG | + | Chr7:83961792-83961811 | MsG0780040895.01.T01:CDS | 55.0% | |
TGGAGCTGCCATGCCCAATT+TGG | - | Chr7:83963007-83963026 | None:intergenic | 55.0% | |
TGTCCGTACAACAGCTTCGC+CGG | - | Chr7:83960778-83960797 | None:intergenic | 55.0% | |
TTCTCGTCCGATCATCACGG+TGG | + | Chr7:83960864-83960883 | MsG0780040895.01.T01:intron | 55.0% | |
! | ACCTCGCCTTCTGAGAGTAG+AGG | + | Chr7:83960831-83960850 | MsG0780040895.01.T01:intron | 55.0% |
! | CGCCTTCTGAGAGTAGAGGA+TGG | + | Chr7:83960835-83960854 | MsG0780040895.01.T01:intron | 55.0% |
! | GTAGAAAGAGGGTATGGGGC+TGG | - | Chr7:83963180-83963199 | None:intergenic | 55.0% |
! | TGAAAGAGCAGAGGGGCATG+AGG | - | Chr7:83962643-83962662 | None:intergenic | 55.0% |
AGCTTCAAACACTCCGGCGC+CGG | + | Chr7:83960756-83960775 | MsG0780040895.01.T01:intron | 60.0% | |
ATGGGGCTGGAGTTAGTCGC+TGG | - | Chr7:83963167-83963186 | None:intergenic | 60.0% | |
CCGATCATCACGGTGGCGTA+CGG | + | Chr7:83960871-83960890 | MsG0780040895.01.T01:intron | 60.0% | |
CCGTACGCCACCGTGATGAT+CGG | - | Chr7:83960874-83960893 | None:intergenic | 60.0% | |
GTGGACGATGGGAGCTCGTA+TGG | + | Chr7:83961791-83961810 | MsG0780040895.01.T01:CDS | 60.0% | |
TGCGAGCTTCGTGACCGCAT+CGG | - | Chr7:83960952-83960971 | None:intergenic | 60.0% | |
TTACCTTGCCGCAGCATGCG+CGG | - | Chr7:83961296-83961315 | None:intergenic | 60.0% | |
ATACCGCGCATGCTGCGGCA+AGG | + | Chr7:83961290-83961309 | MsG0780040895.01.T01:CDS | 65.0% | |
GAGTCGTCGTCGGACCGATG+CGG | + | Chr7:83960935-83960954 | MsG0780040895.01.T01:intron | 65.0% | |
TACAACAGCTTCGCCGGCGC+CGG | - | Chr7:83960772-83960791 | None:intergenic | 65.0% | |
TGTCGGCAGCGTTCCGACTG+AGG | - | Chr7:83960642-83960661 | None:intergenic | 65.0% | |
! | GCGCCGGCGAAGCTGTTGTA+CGG | + | Chr7:83960772-83960791 | MsG0780040895.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 83960557 | 83963564 | 83960557 | ID=MsG0780040895.01;Name=MsG0780040895.01 |
Chr7 | mRNA | 83960557 | 83963564 | 83960557 | ID=MsG0780040895.01.T01;Parent=MsG0780040895.01;Name=MsG0780040895.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0.87|0.88|1|0.75|0.77|9|878|194 |
Chr7 | exon | 83960557 | 83960752 | 83960557 | ID=MsG0780040895.01.T01:exon:11444;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83961281 | 83961311 | 83961281 | ID=MsG0780040895.01.T01:exon:11445;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83961414 | 83961501 | 83961414 | ID=MsG0780040895.01.T01:exon:11446;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83961689 | 83961831 | 83961689 | ID=MsG0780040895.01.T01:exon:11447;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83961972 | 83962016 | 83961972 | ID=MsG0780040895.01.T01:exon:11448;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83962152 | 83962254 | 83962152 | ID=MsG0780040895.01.T01:exon:11449;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83962453 | 83962595 | 83962453 | ID=MsG0780040895.01.T01:exon:11450;Parent=MsG0780040895.01.T01 |
Chr7 | exon | 83962722 | 83962835 | 83962722 | ID=MsG0780040895.01.T01:exon:11451;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83960557 | 83960752 | 83960557 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83961281 | 83961311 | 83961281 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83961414 | 83961501 | 83961414 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83961689 | 83961831 | 83961689 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83961972 | 83962016 | 83961972 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | CDS | 83962152 | 83962233 | 83962152 | ID=MsG0780040895.01.T01:cds;Parent=MsG0780040895.01.T01 |
Chr7 | three_prime_UTR | 83962234 | 83962254 | 83962234 | ID=MsG0780040895.01.T01:three_prime_utr;Parent=MsG0780040895.01.T01 |
Chr7 | three_prime_UTR | 83962453 | 83962595 | 83962453 | ID=MsG0780040895.01.T01:three_prime_utr;Parent=MsG0780040895.01.T01 |
Chr7 | three_prime_UTR | 83962722 | 83962835 | 83962722 | ID=MsG0780040895.01.T01:three_prime_utr;Parent=MsG0780040895.01.T01 |
Chr7 | three_prime_UTR | 83962965 | 83963564 | 83962965 | ID=MsG0780040895.01.T01:three_prime_utr;Parent=MsG0780040895.01.T01 |
Chr7 | mRNA | 83962428 | 83963564 | 83962428 | ID=MsG0780040895.01.T02;Parent=MsG0780040895.01;Name=MsG0780040895.01.T02;_AED=0.35;_eAED=0.38;_QI=0|0.5|0.33|1|1|1|3|510|130 |
Chr7 | exon | 83962428 | 83962595 | 83962428 | ID=MsG0780040895.01.T02:exon:11453;Parent=MsG0780040895.01.T02 |
Chr7 | exon | 83962722 | 83962856 | 83962722 | ID=MsG0780040895.01.T02:exon:11454;Parent=MsG0780040895.01.T02 |
Chr7 | CDS | 83962428 | 83962595 | 83962428 | ID=MsG0780040895.01.T02:cds;Parent=MsG0780040895.01.T02 |
Chr7 | CDS | 83962722 | 83962856 | 83962722 | ID=MsG0780040895.01.T02:cds;Parent=MsG0780040895.01.T02 |
Chr7 | CDS | 83962965 | 83963054 | 83962965 | ID=MsG0780040895.01.T02:cds;Parent=MsG0780040895.01.T02 |
Chr7 | three_prime_UTR | 83963055 | 83963564 | 83963055 | ID=MsG0780040895.01.T02:three_prime_utr;Parent=MsG0780040895.01.T02 |
Gene Sequence |
Protein sequence |