Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044410.01.T01 | XP_013445497.1 | 94.475 | 181 | 2 | 2 | 1 | 174 | 1 | 180 | 7.14E-116 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044410.01.T01 | Q9S758 | 45.109 | 184 | 88 | 5 | 1 | 174 | 1 | 181 | 1.19E-34 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044410.01.T01 | A0A072TRQ4 | 94.475 | 181 | 2 | 2 | 1 | 174 | 1 | 180 | 3.41e-116 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047989.01 | MsG0880044410.01 | 0.809280 | 2.045539e-50 | 1.195972e-47 |
| MsG0080048273.01 | MsG0880044410.01 | 0.829118 | 6.157070e-55 | 6.242509e-52 |
| MsG0080048274.01 | MsG0880044410.01 | 0.823435 | 1.386964e-53 | 1.194086e-50 |
| MsG0080048887.01 | MsG0880044410.01 | 0.800581 | 1.347374e-48 | 6.296721e-46 |
| MsG0080048900.01 | MsG0880044410.01 | 0.817269 | 3.599645e-52 | 2.609220e-49 |
| MsG0080048969.01 | MsG0880044410.01 | 0.814435 | 1.543124e-51 | 1.035370e-48 |
| MsG0180000017.01 | MsG0880044410.01 | 0.832150 | 1.114088e-55 | 1.234571e-52 |
| MsG0180000489.01 | MsG0880044410.01 | 0.828730 | 7.642421e-55 | 7.660264e-52 |
| MsG0180000490.01 | MsG0880044410.01 | 0.834381 | 3.097840e-56 | 3.670109e-53 |
| MsG0180000491.01 | MsG0880044410.01 | 0.841597 | 4.313829e-58 | 6.370472e-55 |
| MsG0180000541.01 | MsG0880044410.01 | 0.803413 | 3.528361e-49 | 1.771936e-46 |
| MsG0180001091.01 | MsG0880044410.01 | 0.852199 | 5.398979e-61 | 1.119679e-57 |
| MsG0180001664.01 | MsG0880044410.01 | 0.800504 | 1.397474e-48 | 6.517738e-46 |
| MsG0180001907.01 | MsG0880044410.01 | 0.806181 | 9.320378e-50 | 5.025953e-47 |
| MsG0880044410.01 | MsG0880044435.01 | 0.943333 | 1.454253e-102 | 1.941939e-97 |
| MsG0880044410.01 | MsG0880044636.01 | 0.810900 | 9.158916e-51 | 5.589684e-48 |
| MsG0880044410.01 | MsG0880045073.01 | 0.823013 | 1.740299e-53 | 1.480690e-50 |
| MsG0880044410.01 | MsG0880045899.01 | 0.824661 | 7.153444e-54 | 6.377897e-51 |
| MsG0880044410.01 | MsG0880045923.01 | 0.854631 | 1.082602e-61 | 2.433112e-58 |
| MsG0880044410.01 | MsG0880046347.01 | 0.809398 | 1.930351e-50 | 1.132176e-47 |
| MsG0880044410.01 | MsG0880046406.01 | 0.838161 | 3.388990e-57 | 4.500678e-54 |
| MsG0880044410.01 | MsG0880046540.01 | 0.827390 | 1.606375e-54 | 1.548852e-51 |
| MsG0880044410.01 | MsG0880046584.01 | 0.800277 | 1.554199e-48 | 7.207390e-46 |
| MsG0880044410.01 | MsG0880046968.01 | 0.800520 | 1.387050e-48 | 6.471818e-46 |
| MsG0880044410.01 | MsG0880046969.01 | 0.827958 | 1.173452e-54 | 1.150196e-51 |
| MsG0880044410.01 | MsG0880047111.01 | 0.809309 | 2.016435e-50 | 1.179836e-47 |
| MsG0880044410.01 | MsG0880047112.01 | 0.862351 | 5.391373e-64 | 1.573988e-60 |
| MsG0880044410.01 | MsG0880047540.01 | 0.803295 | 3.731479e-49 | 1.868221e-46 |
| MsG0180002891.01 | MsG0880044410.01 | 0.853865 | 1.800718e-61 | 3.946896e-58 |
| MsG0180002982.01 | MsG0880044410.01 | 0.830740 | 2.476694e-55 | 2.632713e-52 |
| MsG0180004311.01 | MsG0880044410.01 | 0.817533 | 3.139582e-52 | 2.292332e-49 |
| MsG0180004672.01 | MsG0880044410.01 | 0.831937 | 1.257754e-55 | 1.385345e-52 |
| MsG0180004988.01 | MsG0880044410.01 | 0.800688 | 1.281439e-48 | 6.004611e-46 |
| MsG0180005051.01 | MsG0880044410.01 | 0.802614 | 5.161529e-49 | 2.539697e-46 |
| MsG0180005283.01 | MsG0880044410.01 | 0.827266 | 1.719818e-54 | 1.652124e-51 |
| MsG0180005416.01 | MsG0880044410.01 | 0.842538 | 2.431954e-58 | 3.699183e-55 |
| MsG0180005516.01 | MsG0880044410.01 | 0.807488 | 4.931664e-50 | 2.750529e-47 |
| MsG0180005561.01 | MsG0880044410.01 | 0.823361 | 1.443662e-53 | 1.240227e-50 |
| MsG0180005636.01 | MsG0880044410.01 | -0.818079 | 2.363455e-52 | 1.751603e-49 |
| MsG0180005803.01 | MsG0880044410.01 | 0.818657 | 1.748019e-52 | 1.316326e-49 |
| MsG0180005806.01 | MsG0880044410.01 | 0.830175 | 3.404583e-55 | 3.559916e-52 |
| MsG0180005854.01 | MsG0880044410.01 | 0.808293 | 3.326386e-50 | 1.894726e-47 |
| MsG0180005991.01 | MsG0880044410.01 | 0.846021 | 2.820950e-59 | 4.790805e-56 |
| MsG0780040319.01 | MsG0880044410.01 | 0.813306 | 2.736248e-51 | 1.780474e-48 |
| MsG0780040701.01 | MsG0880044410.01 | 0.821806 | 3.319198e-53 | 2.728631e-50 |
| MsG0780040895.01 | MsG0880044410.01 | 0.835648 | 1.485197e-56 | 1.827554e-53 |
| MsG0780041002.01 | MsG0880044410.01 | 0.807606 | 4.656783e-50 | 2.604982e-47 |
| MsG0780041272.01 | MsG0880044410.01 | 0.817249 | 3.637489e-52 | 2.635246e-49 |
| MsG0780041668.01 | MsG0880044410.01 | 0.813163 | 2.941639e-51 | 1.906528e-48 |
| MsG0880042021.01 | MsG0880044410.01 | 0.809039 | 2.303826e-50 | 1.338293e-47 |
| MsG0880043075.01 | MsG0880044410.01 | 0.808985 | 2.366277e-50 | 1.372551e-47 |
| MsG0880043343.01 | MsG0880044410.01 | 0.800150 | 1.649135e-48 | 7.622869e-46 |
| MsG0880043515.01 | MsG0880044410.01 | 0.815992 | 6.957272e-52 | 4.870071e-49 |
| MsG0280010584.01 | MsG0880044410.01 | 0.852171 | 5.498019e-61 | 1.139145e-57 |
| MsG0280010899.01 | MsG0880044410.01 | 0.810416 | 1.165403e-50 | 7.020598e-48 |
| MsG0280010905.01 | MsG0880044410.01 | 0.827273 | 1.713843e-54 | 1.646679e-51 |
| MsG0280011110.01 | MsG0880044410.01 | -0.811061 | 8.453089e-51 | 5.180819e-48 |
| MsG0280011222.01 | MsG0880044410.01 | 0.817522 | 3.156364e-52 | 2.303984e-49 |
| MsG0380011662.01 | MsG0880044410.01 | 0.801692 | 7.988280e-49 | 3.839311e-46 |
| MsG0380012251.01 | MsG0880044410.01 | 0.807352 | 5.272118e-50 | 2.929952e-47 |
| MsG0380013177.01 | MsG0880044410.01 | 0.810635 | 1.044837e-50 | 6.331298e-48 |
| MsG0380013373.01 | MsG0880044410.01 | 0.800041 | 1.735798e-48 | 8.001161e-46 |
| MsG0380014144.01 | MsG0880044410.01 | 0.807636 | 4.589076e-50 | 2.569177e-47 |
| MsG0380014183.01 | MsG0880044410.01 | 0.814281 | 1.668969e-51 | 1.115126e-48 |
| MsG0380014530.01 | MsG0880044410.01 | 0.820610 | 6.262157e-53 | 4.978257e-50 |
| MsG0380014890.01 | MsG0880044410.01 | 0.824599 | 7.397407e-54 | 6.583564e-51 |
| MsG0680030902.01 | MsG0880044410.01 | 0.818466 | 1.931209e-52 | 1.446833e-49 |
| MsG0680034724.01 | MsG0880044410.01 | 0.800425 | 1.450083e-48 | 6.749973e-46 |
| MsG0680034725.01 | MsG0880044410.01 | 0.825432 | 4.701787e-54 | 4.284655e-51 |
| MsG0680034730.01 | MsG0880044410.01 | 0.845992 | 2.872176e-59 | 4.873384e-56 |
| MsG0680035612.01 | MsG0880044410.01 | 0.847205 | 1.340233e-59 | 2.364304e-56 |
| MsG0480018910.01 | MsG0880044410.01 | 0.842604 | 2.336359e-58 | 3.560908e-55 |
| MsG0480019693.01 | MsG0880044410.01 | 0.849363 | 3.392991e-60 | 6.417305e-57 |
| MsG0480019974.01 | MsG0880044410.01 | 0.868361 | 6.915401e-66 | 2.494630e-62 |
| MsG0480020072.01 | MsG0880044410.01 | 0.838647 | 2.539445e-57 | 3.423305e-54 |
| MsG0480020704.01 | MsG0880044410.01 | 0.837153 | 6.148819e-57 | 7.917314e-54 |
| MsG0480021892.01 | MsG0880044410.01 | 0.809708 | 1.655236e-50 | 9.788684e-48 |
| MsG0480021999.01 | MsG0880044410.01 | 0.875670 | 2.564971e-68 | 1.208160e-64 |
| MsG0480022002.01 | MsG0880044410.01 | 0.837042 | 6.564110e-57 | 8.424032e-54 |
| MsG0480022161.01 | MsG0880044410.01 | 0.800680 | 1.286733e-48 | 6.028136e-46 |
| MsG0480022617.01 | MsG0880044410.01 | 0.810045 | 1.401109e-50 | 8.359437e-48 |
| MsG0480023148.01 | MsG0880044410.01 | 0.802883 | 4.541725e-49 | 2.250100e-46 |
| MsG0480023166.01 | MsG0880044410.01 | 0.812317 | 4.505828e-51 | 2.855614e-48 |
| MsG0480023169.01 | MsG0880044410.01 | 0.814223 | 1.718356e-51 | 1.146280e-48 |
| MsG0480023505.01 | MsG0880044410.01 | 0.806136 | 9.524919e-50 | 5.130228e-47 |
| MsG0480023616.01 | MsG0880044410.01 | 0.815100 | 1.099135e-51 | 7.507626e-49 |
| MsG0480023998.01 | MsG0880044410.01 | 0.804809 | 1.807147e-49 | 9.408167e-47 |
| MsG0580024386.01 | MsG0880044410.01 | 0.848089 | 7.654788e-60 | 1.388775e-56 |
| MsG0580024404.01 | MsG0880044410.01 | 0.830466 | 2.890039e-55 | 3.047148e-52 |
| MsG0580024763.01 | MsG0880044410.01 | 0.828686 | 7.830145e-55 | 7.839191e-52 |
| MsG0580024764.01 | MsG0880044410.01 | 0.802898 | 4.508823e-49 | 2.234728e-46 |
| MsG0580024766.01 | MsG0880044410.01 | 0.826503 | 2.617675e-54 | 2.459390e-51 |
| MsG0580024820.01 | MsG0880044410.01 | 0.875952 | 2.052895e-68 | 9.774239e-65 |
| MsG0580025373.01 | MsG0880044410.01 | 0.810577 | 1.075411e-50 | 6.506585e-48 |
| MsG0580025565.01 | MsG0880044410.01 | 0.806876 | 6.646652e-50 | 3.648471e-47 |
| MsG0580026050.01 | MsG0880044410.01 | 0.857032 | 2.151012e-62 | 5.236493e-59 |
| MsG0380014933.01 | MsG0880044410.01 | 0.815938 | 7.151434e-52 | 4.998475e-49 |
| MsG0380015077.01 | MsG0880044410.01 | 0.801598 | 8.348445e-49 | 4.002851e-46 |
| MsG0380015501.01 | MsG0880044410.01 | 0.807896 | 4.040296e-50 | 2.277281e-47 |
| MsG0380016130.01 | MsG0880044410.01 | 0.826784 | 2.242724e-54 | 2.124131e-51 |
| MsG0380016151.01 | MsG0880044410.01 | 0.845489 | 3.934336e-59 | 6.567088e-56 |
| MsG0380016172.01 | MsG0880044410.01 | 0.804843 | 1.777855e-49 | 9.263615e-47 |
| MsG0380016354.01 | MsG0880044410.01 | 0.841166 | 5.604374e-58 | 8.164856e-55 |
| MsG0380016530.01 | MsG0880044410.01 | 0.804647 | 1.954106e-49 | 1.012989e-46 |
| MsG0380016542.01 | MsG0880044410.01 | 0.827157 | 1.827140e-54 | 1.749476e-51 |
| MsG0380016545.01 | MsG0880044410.01 | 0.830219 | 3.321093e-55 | 3.477168e-52 |
| MsG0380017056.01 | MsG0880044410.01 | 0.809374 | 1.953358e-50 | 1.144935e-47 |
| MsG0380017253.01 | MsG0880044410.01 | -0.802788 | 4.750788e-49 | 2.348123e-46 |
| MsG0380017353.01 | MsG0880044410.01 | 0.856960 | 2.259058e-62 | 5.486107e-59 |
| MsG0480018098.01 | MsG0880044410.01 | 0.830937 | 2.216204e-55 | 2.369592e-52 |
| MsG0480018100.01 | MsG0880044410.01 | 0.832463 | 9.320728e-56 | 1.042552e-52 |
| MsG0480018101.01 | MsG0880044410.01 | 0.837023 | 6.637613e-57 | 8.513621e-54 |
| MsG0480018196.01 | MsG0880044410.01 | 0.806890 | 6.601999e-50 | 3.625248e-47 |
| MsG0480018232.01 | MsG0880044410.01 | 0.823307 | 1.486422e-53 | 1.275082e-50 |
| MsG0480018323.01 | MsG0880044410.01 | 0.844263 | 8.422719e-59 | 1.352337e-55 |
| MsG0480018324.01 | MsG0880044410.01 | 0.815229 | 1.029114e-51 | 7.054253e-49 |
| MsG0480018329.01 | MsG0880044410.01 | 0.803480 | 3.417228e-49 | 1.719130e-46 |
| MsG0480018330.01 | MsG0880044410.01 | 0.804526 | 2.070632e-49 | 1.070010e-46 |
| MsG0580026291.01 | MsG0880044410.01 | 0.821171 | 4.653947e-53 | 3.758217e-50 |
| MsG0580027761.01 | MsG0880044410.01 | 0.805100 | 1.571392e-49 | 8.241570e-47 |
| MsG0580028092.01 | MsG0880044410.01 | 0.818345 | 2.057303e-52 | 1.536140e-49 |
| MsG0580028093.01 | MsG0880044410.01 | 0.828444 | 8.962569e-55 | 8.910253e-52 |
| MsG0580029276.01 | MsG0880044410.01 | 0.844808 | 6.011322e-59 | 9.819198e-56 |
| MsG0580029719.01 | MsG0880044410.01 | 0.803349 | 3.636776e-49 | 1.823312e-46 |
| MsG0580030063.01 | MsG0880044410.01 | 0.857499 | 1.566005e-62 | 3.873179e-59 |
| MsG0280006587.01 | MsG0880044410.01 | 0.823861 | 1.102439e-53 | 9.607240e-51 |
| MsG0280006706.01 | MsG0880044410.01 | 0.804767 | 1.844647e-49 | 9.592508e-47 |
| MsG0280006989.01 | MsG0880044410.01 | 0.811248 | 7.697658e-51 | 4.741074e-48 |
| MsG0280007017.01 | MsG0880044410.01 | 0.807745 | 4.351143e-50 | 2.442995e-47 |
| MsG0280007248.01 | MsG0880044410.01 | 0.810895 | 9.179491e-51 | 5.601552e-48 |
| MsG0280008233.01 | MsG0880044410.01 | 0.806409 | 8.340977e-50 | 4.523896e-47 |
| MsG0280008309.01 | MsG0880044410.01 | 0.816246 | 6.104033e-52 | 4.302725e-49 |
| MsG0280008531.01 | MsG0880044410.01 | 0.824481 | 7.885849e-54 | 6.993522e-51 |
| MsG0280008966.01 | MsG0880044410.01 | 0.820713 | 5.931494e-53 | 4.729148e-50 |
| MsG0280009103.01 | MsG0880044410.01 | 0.802871 | 4.566794e-49 | 2.261900e-46 |
| MsG0280009434.01 | MsG0880044410.01 | 0.867939 | 9.451477e-66 | 3.358408e-62 |
| MsG0280010523.01 | MsG0880044410.01 | 0.807978 | 3.881624e-50 | 2.192648e-47 |
| MsG0780036583.01 | MsG0880044410.01 | 0.814560 | 1.447814e-51 | 9.746988e-49 |
| MsG0780036584.01 | MsG0880044410.01 | 0.861726 | 8.375783e-64 | 2.392454e-60 |
| MsG0780038334.01 | MsG0880044410.01 | 0.813166 | 2.936526e-51 | 1.903400e-48 |
| MsG0780038337.01 | MsG0880044410.01 | 0.807673 | 4.505971e-50 | 2.525092e-47 |
| MsG0780038341.01 | MsG0880044410.01 | 0.801162 | 1.025731e-48 | 4.864606e-46 |
| MsG0780038381.01 | MsG0880044410.01 | 0.819702 | 1.010872e-52 | 7.836618e-50 |
| MsG0780039179.01 | MsG0880044410.01 | 0.830105 | 3.541245e-55 | 3.695152e-52 |
| MsG0780039256.01 | MsG0880044410.01 | 0.832378 | 9.783401e-56 | 1.091549e-52 |
| MsG0780039449.01 | MsG0880044410.01 | 0.810095 | 1.366465e-50 | 8.163271e-48 |
| MsG0780039795.01 | MsG0880044410.01 | 0.825950 | 3.543522e-54 | 3.277543e-51 |
| MsG0780039805.01 | MsG0880044410.01 | 0.843558 | 1.301479e-58 | 2.044040e-55 |
| MsG0780039986.01 | MsG0880044410.01 | 0.805093 | 1.576184e-49 | 8.265353e-47 |
| MsG0780040080.01 | MsG0880044410.01 | 0.827198 | 1.785961e-54 | 1.712251e-51 |
| MsG0780040154.01 | MsG0880044410.01 | 0.820296 | 7.394372e-53 | 5.827719e-50 |
| MsG0780040155.01 | MsG0880044410.01 | 0.836427 | 9.420017e-57 | 1.186743e-53 |
| MsG0780040175.01 | MsG0880044410.01 | 0.806247 | 9.025788e-50 | 4.875338e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880044435.01 | MsG0880044410.01 | PPI |
| MsG0280010171.01 | MsG0880044410.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044410.01.T01 | MTR_8g463140 | 94.475 | 181 | 2 | 2 | 1 | 174 | 1 | 180 | 8.65e-120 | 336 |
| MsG0880044410.01.T01 | MTR_2g078770 | 58.993 | 139 | 46 | 3 | 45 | 174 | 35 | 171 | 3.23e-43 | 142 |
| MsG0880044410.01.T01 | MTR_4g088555 | 64.286 | 84 | 23 | 1 | 57 | 133 | 54 | 137 | 4.54e-34 | 117 |
| MsG0880044410.01.T01 | MTR_7g110320 | 48.026 | 152 | 54 | 3 | 15 | 148 | 90 | 234 | 4.05e-32 | 121 |
| MsG0880044410.01.T01 | MTR_7g110320 | 48.026 | 152 | 54 | 3 | 15 | 148 | 90 | 234 | 6.67e-32 | 120 |
| MsG0880044410.01.T01 | MTR_7g092930 | 59.341 | 91 | 30 | 1 | 54 | 137 | 56 | 146 | 1.38e-29 | 111 |
| MsG0880044410.01.T01 | MTR_2g014200 | 50.459 | 109 | 43 | 2 | 39 | 136 | 33 | 141 | 3.11e-29 | 105 |
| MsG0880044410.01.T01 | MTR_3g085180 | 60.976 | 82 | 25 | 1 | 64 | 138 | 163 | 244 | 9.24e-29 | 110 |
| MsG0880044410.01.T01 | MTR_8g005960 | 63.529 | 85 | 24 | 1 | 56 | 133 | 177 | 261 | 4.77e-28 | 107 |
| MsG0880044410.01.T01 | MTR_1g086250 | 47.917 | 144 | 62 | 3 | 15 | 148 | 96 | 236 | 4.79e-28 | 109 |
| MsG0880044410.01.T01 | MTR_7g444860 | 56.989 | 93 | 33 | 1 | 58 | 143 | 141 | 233 | 6.51e-27 | 103 |
| MsG0880044410.01.T01 | MTR_1g053715 | 59.302 | 86 | 28 | 1 | 59 | 137 | 67 | 152 | 9.77e-27 | 103 |
| MsG0880044410.01.T01 | MTR_1g035010 | 53.398 | 103 | 41 | 1 | 54 | 149 | 92 | 194 | 1.69e-26 | 105 |
| MsG0880044410.01.T01 | MTR_2g046550 | 62.500 | 80 | 23 | 1 | 66 | 138 | 139 | 218 | 1.91e-25 | 102 |
| MsG0880044410.01.T01 | MTR_3g099080 | 45.299 | 117 | 51 | 3 | 66 | 170 | 98 | 213 | 5.86e-24 | 96.7 |
| MsG0880044410.01.T01 | MTR_8g080690 | 58.025 | 81 | 27 | 1 | 64 | 137 | 149 | 229 | 6.90e-24 | 96.7 |
| MsG0880044410.01.T01 | MTR_4g109770 | 57.143 | 84 | 28 | 2 | 66 | 141 | 123 | 206 | 1.05e-23 | 96.7 |
| MsG0880044410.01.T01 | MTR_7g028740 | 54.430 | 79 | 29 | 1 | 66 | 137 | 77 | 155 | 1.06e-23 | 95.9 |
| MsG0880044410.01.T01 | MTR_5g046670 | 57.895 | 76 | 25 | 1 | 64 | 132 | 242 | 317 | 1.29e-22 | 94.0 |
| MsG0880044410.01.T01 | MTR_8g096780 | 54.118 | 85 | 32 | 1 | 66 | 143 | 99 | 183 | 1.40e-22 | 93.2 |
| MsG0880044410.01.T01 | MTR_8g080670 | 55.263 | 76 | 27 | 1 | 63 | 131 | 159 | 234 | 3.94e-22 | 92.0 |
| MsG0880044410.01.T01 | MTR_8g080680 | 45.361 | 97 | 46 | 1 | 54 | 143 | 120 | 216 | 1.36e-21 | 90.5 |
| MsG0880044410.01.T01 | MTR_2g461920 | 59.459 | 74 | 23 | 1 | 66 | 132 | 171 | 244 | 5.66e-21 | 89.4 |
| MsG0880044410.01.T01 | MTR_1g086250 | 69.767 | 43 | 13 | 0 | 106 | 148 | 2 | 44 | 8.72e-12 | 63.2 |
| MsG0880044410.01.T01 | MTR_2g020620 | 38.202 | 89 | 48 | 1 | 75 | 156 | 99 | 187 | 1.60e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044410.01.T01 | AT3G15270 | 45.109 | 184 | 88 | 5 | 1 | 174 | 1 | 181 | 1.21e-35 | 122 |
| MsG0880044410.01.T01 | AT3G60030 | 44.805 | 154 | 74 | 3 | 6 | 148 | 63 | 216 | 1.42e-31 | 120 |
| MsG0880044410.01.T01 | AT1G53160 | 50.370 | 135 | 55 | 5 | 52 | 174 | 40 | 174 | 2.61e-31 | 111 |
| MsG0880044410.01.T01 | AT1G53160 | 50.370 | 135 | 55 | 5 | 52 | 174 | 40 | 174 | 2.61e-31 | 111 |
| MsG0880044410.01.T01 | AT1G53160 | 58.586 | 99 | 33 | 2 | 52 | 142 | 40 | 138 | 3.62e-30 | 108 |
| MsG0880044410.01.T01 | AT2G33810 | 57.471 | 87 | 30 | 1 | 57 | 136 | 45 | 131 | 9.67e-30 | 106 |
| MsG0880044410.01.T01 | AT1G02065 | 53.774 | 106 | 41 | 2 | 55 | 153 | 177 | 281 | 6.10e-28 | 106 |
| MsG0880044410.01.T01 | AT2G47070 | 61.364 | 88 | 27 | 1 | 62 | 142 | 102 | 189 | 6.22e-28 | 109 |
| MsG0880044410.01.T01 | AT2G42200 | 61.728 | 81 | 24 | 1 | 64 | 137 | 72 | 152 | 1.55e-25 | 100 |
| MsG0880044410.01.T01 | AT1G20980 | 56.701 | 97 | 32 | 3 | 53 | 141 | 109 | 203 | 2.01e-24 | 99.4 |
| MsG0880044410.01.T01 | AT1G69170 | 60.526 | 76 | 23 | 1 | 64 | 132 | 122 | 197 | 2.66e-24 | 98.2 |
| MsG0880044410.01.T01 | AT5G43270 | 56.471 | 85 | 30 | 1 | 64 | 141 | 167 | 251 | 6.68e-24 | 97.1 |
| MsG0880044410.01.T01 | AT5G43270 | 56.471 | 85 | 30 | 1 | 64 | 141 | 167 | 251 | 6.68e-24 | 97.1 |
| MsG0880044410.01.T01 | AT5G43270 | 56.471 | 85 | 30 | 1 | 64 | 141 | 167 | 251 | 6.68e-24 | 97.1 |
| MsG0880044410.01.T01 | AT1G76580 | 60.494 | 81 | 25 | 1 | 64 | 137 | 112 | 192 | 8.02e-24 | 97.8 |
| MsG0880044410.01.T01 | AT5G50670 | 51.685 | 89 | 36 | 1 | 55 | 136 | 90 | 178 | 8.27e-24 | 96.3 |
| MsG0880044410.01.T01 | AT5G50670 | 51.685 | 89 | 36 | 1 | 55 | 136 | 90 | 178 | 8.27e-24 | 96.3 |
| MsG0880044410.01.T01 | AT5G50570 | 51.685 | 89 | 36 | 1 | 55 | 136 | 90 | 178 | 8.27e-24 | 96.3 |
| MsG0880044410.01.T01 | AT5G50570 | 51.685 | 89 | 36 | 1 | 55 | 136 | 90 | 178 | 8.27e-24 | 96.3 |
| MsG0880044410.01.T01 | AT1G76580 | 60.494 | 81 | 25 | 1 | 64 | 137 | 112 | 192 | 8.43e-24 | 97.8 |
| MsG0880044410.01.T01 | AT1G76580 | 60.494 | 81 | 25 | 1 | 64 | 137 | 112 | 192 | 1.23e-23 | 97.1 |
| MsG0880044410.01.T01 | AT3G57920 | 53.409 | 88 | 34 | 1 | 66 | 146 | 59 | 146 | 1.56e-22 | 92.8 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 2.97e-21 | 89.0 |
| MsG0880044410.01.T01 | AT1G27360 | 41.135 | 141 | 57 | 4 | 9 | 136 | 131 | 258 | 3.89e-21 | 89.4 |
| MsG0880044410.01.T01 | AT1G27360 | 41.135 | 141 | 57 | 4 | 9 | 136 | 131 | 258 | 3.89e-21 | 89.4 |
| MsG0880044410.01.T01 | AT1G27360 | 41.135 | 141 | 57 | 4 | 9 | 136 | 131 | 258 | 3.89e-21 | 89.4 |
| MsG0880044410.01.T01 | AT1G27360 | 41.135 | 141 | 57 | 4 | 9 | 136 | 131 | 258 | 3.89e-21 | 89.4 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G27370 | 52.439 | 82 | 32 | 1 | 58 | 132 | 168 | 249 | 6.95e-21 | 88.6 |
| MsG0880044410.01.T01 | AT1G02065 | 65.385 | 52 | 18 | 0 | 55 | 106 | 177 | 228 | 6.78e-17 | 75.9 |
| MsG0880044410.01.T01 | AT2G47070 | 61.017 | 59 | 16 | 1 | 91 | 142 | 2 | 60 | 7.99e-15 | 71.6 |
| MsG0880044410.01.T01 | AT5G18830 | 38.333 | 120 | 59 | 3 | 20 | 132 | 100 | 211 | 3.13e-14 | 70.1 |
| MsG0880044410.01.T01 | AT5G18830 | 38.333 | 120 | 59 | 3 | 20 | 132 | 100 | 211 | 3.64e-14 | 70.1 |
| MsG0880044410.01.T01 | AT5G18830 | 38.333 | 120 | 59 | 3 | 20 | 132 | 100 | 211 | 4.22e-14 | 69.7 |
Find 78 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAACTCACACACTTTA+TGG | 0.102129 | 8:+41574302 | None:intergenic |
| CTCTCTCTTCTGTCACCTTC+TGG | 0.186522 | 8:-41573439 | MsG0880044410.01.T01:three_prime_UTR |
| CTTCCCTCATTGGCAGCTTC+CGG | 0.190285 | 8:+41573598 | None:intergenic |
| AGGATATTTGGTGGGTAATT+AGG | 0.244632 | 8:+41573359 | None:intergenic |
| TATTCAAAGGTGCTTTAATA+AGG | 0.268894 | 8:+41573278 | None:intergenic |
| TTCCCTCATTGGCAGCTTCC+GGG | 0.294452 | 8:+41573599 | None:intergenic |
| ATGAACTTACCAGGCAGTTC+TGG | 0.301804 | 8:-41573523 | MsG0880044410.01.T01:CDS |
| ACACCTCTCTGCTTGGCAAC+AGG | 0.310269 | 8:+41574363 | None:intergenic |
| CCAAATATCCTACATTTAAA+AGG | 0.321227 | 8:-41573347 | MsG0880044410.01.T01:three_prime_UTR |
| GCACCTGTTGTGGTGGTTGC+AGG | 0.325472 | 8:-41574274 | MsG0880044410.01.T01:CDS |
| GCTGTGACTGCTTCCCTCAT+TGG | 0.328447 | 8:+41573588 | None:intergenic |
| GGGGTCGGTGGCGGGAGAAG+AGG | 0.366575 | 8:-41574412 | MsG0880044410.01.T01:CDS |
| AGCTGCCGCAGGCGGTTGGC+TGG | 0.389734 | 8:-41573649 | MsG0880044410.01.T01:CDS |
| GTCGGTGGCGGGAGAAGAGG+AGG | 0.392564 | 8:-41574409 | MsG0880044410.01.T01:CDS |
| CTGAAGAAGAGAAGAAGAAA+GGG | 0.392986 | 8:-41574432 | MsG0880044410.01.T01:CDS |
| GGGAGAAGAGGAGGAGGTGG+TGG | 0.399391 | 8:-41574400 | MsG0880044410.01.T01:CDS |
| TTAGCTTCATCTAATGTTGA+AGG | 0.400420 | 8:+41573492 | None:intergenic |
| CAACATGGTGGAAGAAGAAA+TGG | 0.403464 | 8:-41574494 | MsG0880044410.01.T01:CDS |
| ATCCCTGCAACCACCACAAC+AGG | 0.415205 | 8:+41574271 | None:intergenic |
| AGAAGAAAGGGGTCGGTGGC+GGG | 0.418165 | 8:-41574420 | MsG0880044410.01.T01:CDS |
| TGTCACCTTCTGGTTTCTTA+CGG | 0.423252 | 8:-41573429 | MsG0880044410.01.T01:three_prime_UTR |
| AAGAAGAAAGGGGTCGGTGG+CGG | 0.439947 | 8:-41574421 | MsG0880044410.01.T01:CDS |
| ATCCTGCATTGAGTTTCCTT+AGG | 0.443576 | 8:+41573550 | None:intergenic |
| AGGATCTTTATTCTATGCCT+TGG | 0.454275 | 8:+41573405 | None:intergenic |
| AAATGAAGTAGAAGAGGAGG+AGG | 0.457054 | 8:-41574470 | MsG0880044410.01.T01:CDS |
| GGCGGGAGAAGAGGAGGAGG+TGG | 0.458486 | 8:-41574403 | MsG0880044410.01.T01:CDS |
| CACCTCTCTGCTTGGCAACA+GGG | 0.470728 | 8:+41574364 | None:intergenic |
| AGAAGAGGAGGAGGTGGTGG+CGG | 0.471441 | 8:-41574397 | MsG0880044410.01.T01:CDS |
| TGGTTGCAGGGATGAGGCAG+AGG | 0.476673 | 8:-41574261 | MsG0880044410.01.T01:intron |
| TTCTGGTTTCTTACGGTCCA+AGG | 0.480571 | 8:-41573422 | MsG0880044410.01.T01:three_prime_UTR |
| TCATTCCAAGGCACCTGTTG+TGG | 0.481858 | 8:-41574284 | MsG0880044410.01.T01:CDS |
| CAGCTCCACACCTCTCTGCT+TGG | 0.503571 | 8:+41574356 | None:intergenic |
| AATGGAAAATGAAGTAGAAG+AGG | 0.504373 | 8:-41574476 | MsG0880044410.01.T01:CDS |
| TTGTGGTGGTTGCAGGGATG+AGG | 0.505992 | 8:-41574267 | MsG0880044410.01.T01:CDS |
| AACCACCACAACAGGTGCCT+TGG | 0.507647 | 8:+41574279 | None:intergenic |
| ACTGAAGAAGAGAAGAAGAA+AGG | 0.514644 | 8:-41574433 | MsG0880044410.01.T01:CDS |
| GACTTATAGCCAGAACTGCC+TGG | 0.517160 | 8:+41573514 | None:intergenic |
| AAGAAGCTGCCGCAGGCGGT+TGG | 0.518296 | 8:-41573653 | MsG0880044410.01.T01:CDS |
| TTTAAATGTAGGATATTTGG+TGG | 0.521244 | 8:+41573350 | None:intergenic |
| GGAAAATGAAGTAGAAGAGG+AGG | 0.522072 | 8:-41574473 | MsG0880044410.01.T01:CDS |
| GAGGAAGAGAACATTGATGA+TGG | 0.526926 | 8:-41574533 | MsG0880044410.01.T01:CDS |
| GCTGTGCAGGTTCCATGACT+TGG | 0.541073 | 8:-41573695 | MsG0880044410.01.T01:intron |
| GAAGAGAAGAAGAAAGGGGT+CGG | 0.545505 | 8:-41574427 | MsG0880044410.01.T01:CDS |
| CACCTGTTGTGGTGGTTGCA+GGG | 0.546200 | 8:-41574273 | MsG0880044410.01.T01:CDS |
| GGTGGCGGGAGAAGAGGAGG+AGG | 0.550955 | 8:-41574406 | MsG0880044410.01.T01:CDS |
| AATAGGGTTACAATATTCAA+AGG | 0.554879 | 8:+41573265 | None:intergenic |
| TTCCAAGGCACCTGTTGTGG+TGG | 0.554919 | 8:-41574281 | MsG0880044410.01.T01:CDS |
| AACCTAAGGAAACTCAATGC+AGG | 0.557539 | 8:-41573552 | MsG0880044410.01.T01:CDS |
| CTCACAAAACAATGGAAGCT+AGG | 0.561345 | 8:-41574564 | None:intergenic |
| AGTGTGTGAGTTTCATTCCA+AGG | 0.564413 | 8:-41574296 | MsG0880044410.01.T01:CDS |
| GGTGACAGAAGAGAGAGAGC+TGG | 0.567068 | 8:+41573445 | None:intergenic |
| AACCCGGAAGCTGCCAATGA+GGG | 0.567204 | 8:-41573601 | MsG0880044410.01.T01:CDS |
| CATCAAACTCTACCAAGTCA+TGG | 0.569400 | 8:+41573683 | None:intergenic |
| TGATGATGGAAAAGATGAGA+AGG | 0.573354 | 8:-41574519 | MsG0880044410.01.T01:CDS |
| TGTGTCCAGCCAACCGCCTG+CGG | 0.577001 | 8:+41573644 | None:intergenic |
| CAAAGGACAACTTCAACCTA+AGG | 0.577782 | 8:-41573566 | MsG0880044410.01.T01:CDS |
| TAACCCGGAAGCTGCCAATG+AGG | 0.578559 | 8:-41573602 | MsG0880044410.01.T01:CDS |
| GAGGTGTGGAGCTGATTTGA+CGG | 0.578847 | 8:-41574347 | MsG0880044410.01.T01:CDS |
| GAGAAGAAGAAAGGGGTCGG+TGG | 0.581205 | 8:-41574424 | MsG0880044410.01.T01:CDS |
| TTGTTGTGATGAACATACAA+AGG | 0.601220 | 8:+41573385 | None:intergenic |
| AGTCTAAAAGAAGCTGCCGC+AGG | 0.602245 | 8:-41573660 | MsG0880044410.01.T01:CDS |
| AATGAAGTAGAAGAGGAGGA+GGG | 0.609345 | 8:-41574469 | MsG0880044410.01.T01:CDS |
| AGGATTCAGATGAACTTACC+AGG | 0.609388 | 8:-41573532 | MsG0880044410.01.T01:CDS |
| TGTTGCCAAGCAGAGAGGTG+TGG | 0.615642 | 8:-41574361 | MsG0880044410.01.T01:CDS |
| CTGGACACAATGAACGGCGT+CGG | 0.620841 | 8:-41573630 | MsG0880044410.01.T01:CDS |
| TTAAATGTAGGATATTTGGT+GGG | 0.622144 | 8:+41573351 | None:intergenic |
| CTAAAAGAAGCTGCCGCAGG+CGG | 0.624624 | 8:-41573657 | MsG0880044410.01.T01:CDS |
| GAGGGAAGCAGTCACAGCAA+AGG | 0.634063 | 8:-41573583 | MsG0880044410.01.T01:CDS |
| CACCCTGTTGCCAAGCAGAG+AGG | 0.641872 | 8:-41574366 | MsG0880044410.01.T01:CDS |
| GGTTGGCTGGACACAATGAA+CGG | 0.643542 | 8:-41573636 | MsG0880044410.01.T01:CDS |
| ACGGCGTCGGAAAACTAACC+CGG | 0.648511 | 8:-41573617 | MsG0880044410.01.T01:CDS |
| CTCTCTGCTTGGCAACAGGG+TGG | 0.650434 | 8:+41574367 | None:intergenic |
| TTGGACCGTAAGAAACCAGA+AGG | 0.656890 | 8:+41573424 | None:intergenic |
| TGAAGAAGAGAAGAAGAAAG+GGG | 0.675275 | 8:-41574431 | MsG0880044410.01.T01:CDS |
| TGGAAGCTAGGAGTATTGAG+AGG | 0.681882 | 8:-41574552 | MsG0880044410.01.T01:CDS |
| GAAACTCACACACTTTATGG+CGG | 0.694059 | 8:+41574305 | None:intergenic |
| GATGAGAAGGAACAACATGG+TGG | 0.695331 | 8:-41574506 | MsG0880044410.01.T01:CDS |
| AAAGATGAGAAGGAACAACA+TGG | 0.732079 | 8:-41574509 | MsG0880044410.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCAAATGTTTTAAAAAT+TGG | - | Chr8:41573667-41573686 | MsG0880044410.01.T01:CDS | 10.0% |
| !! | AAAGCAAACAAAAATAATTA+AGG | - | Chr8:41573744-41573763 | MsG0880044410.01.T01:intron | 15.0% |
| !! | AAGCAAACAAAAATAATTAA+GGG | - | Chr8:41573745-41573764 | MsG0880044410.01.T01:intron | 15.0% |
| ! | AAAACTGACCTTAAATATCT+TGG | - | Chr8:41573955-41573974 | MsG0880044410.01.T01:intron | 25.0% |
| ! | AATAGGGTTACAATATTCAA+AGG | + | Chr8:41574517-41574536 | None:intergenic | 25.0% |
| ! | ATCTCAGTTATACAATAGTT+CGG | + | Chr8:41573815-41573834 | None:intergenic | 25.0% |
| ! | CAAACAAAAATAATTAAGGG+AGG | - | Chr8:41573748-41573767 | MsG0880044410.01.T01:intron | 25.0% |
| ! | CCAAATATCCTACATTTAAA+AGG | - | Chr8:41574432-41574451 | MsG0880044410.01.T01:CDS | 25.0% |
| ! | TCCAAAAGAATAAAAAGCTA+CGG | - | Chr8:41574543-41574562 | MsG0880044410.01.T01:CDS | 25.0% |
| ! | TTAAATGTAGGATATTTGGT+GGG | + | Chr8:41574431-41574450 | None:intergenic | 25.0% |
| ! | TTTAAATGTAGGATATTTGG+TGG | + | Chr8:41574432-41574451 | None:intergenic | 25.0% |
| !! | ACTTATGACCTTTTAAATGT+AGG | + | Chr8:41574443-41574462 | None:intergenic | 25.0% |
| !! | CCTTTTAAATGTAGGATATT+TGG | + | Chr8:41574435-41574454 | None:intergenic | 25.0% |
| !! | TCTTCTTTTTGCAGAAATTT+AGG | + | Chr8:41574002-41574021 | None:intergenic | 25.0% |
| !!! | TATTCAAAGGTGCTTTAATA+AGG | + | Chr8:41574504-41574523 | None:intergenic | 25.0% |
| !!! | TTGAAGCAATGTTTTAAAAC+CGG | + | Chr8:41573912-41573931 | None:intergenic | 25.0% |
| AATGAAACTCACACACTTTA+TGG | + | Chr8:41573480-41573499 | None:intergenic | 30.0% | |
| AATGGAAAATGAAGTAGAAG+AGG | - | Chr8:41573303-41573322 | MsG0880044410.01.T01:three_prime_UTR | 30.0% | |
| CTAAGTAAACCATAACCTTA+AGG | + | Chr8:41573714-41573733 | None:intergenic | 30.0% | |
| GAGCTAAAAAAACAGATCAT+AGG | + | Chr8:41573636-41573655 | None:intergenic | 30.0% | |
| TTAGCTTCATCTAATGTTGA+AGG | + | Chr8:41574290-41574309 | None:intergenic | 30.0% | |
| TTGATGAGTGTTAGAGAAAA+TGG | + | Chr8:41573585-41573604 | None:intergenic | 30.0% | |
| TTGTTGTGATGAACATACAA+AGG | + | Chr8:41574397-41574416 | None:intergenic | 30.0% | |
| ! | CTGATTCAACCGATTTAAAT+GGG | + | Chr8:41573879-41573898 | None:intergenic | 30.0% |
| ! | TCTGATTCAACCGATTTAAA+TGG | + | Chr8:41573880-41573899 | None:intergenic | 30.0% |
| !! | AGCTTTTTATTCTTTTGGAG+TGG | + | Chr8:41574542-41574561 | None:intergenic | 30.0% |
| !!! | ATTCTTTTGGAGTGGAAAAT+AGG | + | Chr8:41574534-41574553 | None:intergenic | 30.0% |
| !!! | TTCTTTTGGAGTGGAAAATA+GGG | + | Chr8:41574533-41574552 | None:intergenic | 30.0% |
| AAAGATGAGAAGGAACAACA+TGG | - | Chr8:41573270-41573289 | MsG0880044410.01.T01:three_prime_UTR | 35.0% | |
| ACTGAAGAAGAGAAGAAGAA+AGG | - | Chr8:41573346-41573365 | MsG0880044410.01.T01:three_prime_UTR | 35.0% | |
| AGGATCTTTATTCTATGCCT+TGG | + | Chr8:41574377-41574396 | None:intergenic | 35.0% | |
| CTGAAGAAGAGAAGAAGAAA+GGG | - | Chr8:41573347-41573366 | MsG0880044410.01.T01:three_prime_UTR | 35.0% | |
| GCTCTAGTCCAAGATATTTA+AGG | + | Chr8:41573966-41573985 | None:intergenic | 35.0% | |
| TATTAGACTGTGAGACCTTA+AGG | - | Chr8:41573696-41573715 | MsG0880044410.01.T01:intron | 35.0% | |
| TGAAGAAGAGAAGAAGAAAG+GGG | - | Chr8:41573348-41573367 | MsG0880044410.01.T01:three_prime_UTR | 35.0% | |
| TTGAATCAGACACTTCAATC+CGG | - | Chr8:41573890-41573909 | MsG0880044410.01.T01:intron | 35.0% | |
| ! | AGGATATTTGGTGGGTAATT+AGG | + | Chr8:41574423-41574442 | None:intergenic | 35.0% |
| ! | CAACCGATTTAAATGGGAAT+CGG | + | Chr8:41573873-41573892 | None:intergenic | 35.0% |
| ! | GCCGTAGCTTTTTATTCTTT+TGG | + | Chr8:41574547-41574566 | None:intergenic | 35.0% |
| !! | TGATGATGGAAAAGATGAGA+AGG | - | Chr8:41573260-41573279 | MsG0880044410.01.T01:three_prime_UTR | 35.0% |
| AAATGAAGTAGAAGAGGAGG+AGG | - | Chr8:41573309-41573328 | MsG0880044410.01.T01:three_prime_UTR | 40.0% | |
| AACCTAAGGAAACTCAATGC+AGG | - | Chr8:41574227-41574246 | MsG0880044410.01.T01:intron | 40.0% | |
| AATGAAGTAGAAGAGGAGGA+GGG | - | Chr8:41573310-41573329 | MsG0880044410.01.T01:three_prime_UTR | 40.0% | |
| ACTGTGAGACCTTAAGGTTA+TGG | - | Chr8:41573702-41573721 | MsG0880044410.01.T01:intron | 40.0% | |
| AGGATTCAGATGAACTTACC+AGG | - | Chr8:41574247-41574266 | MsG0880044410.01.T01:intron | 40.0% | |
| AGTGTGTGAGTTTCATTCCA+AGG | - | Chr8:41573483-41573502 | MsG0880044410.01.T01:exon | 40.0% | |
| ATCAGATCAGTCACTTCAAC+TGG | - | Chr8:41573784-41573803 | MsG0880044410.01.T01:intron | 40.0% | |
| ATCCTGCATTGAGTTTCCTT+AGG | + | Chr8:41574232-41574251 | None:intergenic | 40.0% | |
| CAAAGGACAACTTCAACCTA+AGG | - | Chr8:41574213-41574232 | MsG0880044410.01.T01:intron | 40.0% | |
| CATCAAACTCTACCAAGTCA+TGG | + | Chr8:41574099-41574118 | None:intergenic | 40.0% | |
| CGAATTTAATCCCGGCAAAT+TGG | - | Chr8:41573847-41573866 | MsG0880044410.01.T01:intron | 40.0% | |
| GAAACTCACACACTTTATGG+CGG | + | Chr8:41573477-41573496 | None:intergenic | 40.0% | |
| GAGGAAGAGAACATTGATGA+TGG | - | Chr8:41573246-41573265 | MsG0880044410.01.T01:three_prime_UTR | 40.0% | |
| GGAAAATGAAGTAGAAGAGG+AGG | - | Chr8:41573306-41573325 | MsG0880044410.01.T01:three_prime_UTR | 40.0% | |
| TCAAGCAGCGAATTTAATCC+CGG | - | Chr8:41573839-41573858 | MsG0880044410.01.T01:intron | 40.0% | |
| ! | CAACATGGTGGAAGAAGAAA+TGG | - | Chr8:41573285-41573304 | MsG0880044410.01.T01:three_prime_UTR | 40.0% |
| ! | TGGCCGATTCCCATTTAAAT+CGG | - | Chr8:41573867-41573886 | MsG0880044410.01.T01:intron | 40.0% |
| !! | GGTTTTGTCAACAATGTAGC+AGG | - | Chr8:41573539-41573558 | MsG0880044410.01.T01:CDS | 40.0% |
| !! | TGTCACCTTCTGGTTTCTTA+CGG | - | Chr8:41574350-41574369 | MsG0880044410.01.T01:CDS | 40.0% |
| AATGACGAGTTATGCTGTGC+AGG | - | Chr8:41574071-41574090 | MsG0880044410.01.T01:intron | 45.0% | |
| ATGAACTTACCAGGCAGTTC+TGG | - | Chr8:41574256-41574275 | MsG0880044410.01.T01:intron | 45.0% | |
| GAAGAGAAGAAGAAAGGGGT+CGG | - | Chr8:41573352-41573371 | MsG0880044410.01.T01:three_prime_UTR | 45.0% | |
| GATGAGAAGGAACAACATGG+TGG | - | Chr8:41573273-41573292 | MsG0880044410.01.T01:three_prime_UTR | 45.0% | |
| TTGGACCGTAAGAAACCAGA+AGG | + | Chr8:41574358-41574377 | None:intergenic | 45.0% | |
| !! | TGGAAGCTAGGAGTATTGAG+AGG | - | Chr8:41573227-41573246 | MsG0880044410.01.T01:three_prime_UTR | 45.0% |
| !! | TTCTGGTTTCTTACGGTCCA+AGG | - | Chr8:41574357-41574376 | MsG0880044410.01.T01:CDS | 45.0% |
| AGTCTAAAAGAAGCTGCCGC+AGG | - | Chr8:41574119-41574138 | MsG0880044410.01.T01:intron | 50.0% | |
| ATGGGAATCGGCCAATTTGC+CGG | + | Chr8:41573861-41573880 | None:intergenic | 50.0% | |
| CTCTCTCTTCTGTCACCTTC+TGG | - | Chr8:41574340-41574359 | MsG0880044410.01.T01:CDS | 50.0% | |
| GACTTATAGCCAGAACTGCC+TGG | + | Chr8:41574268-41574287 | None:intergenic | 50.0% | |
| ! | GGTTGGCTGGACACAATGAA+CGG | - | Chr8:41574143-41574162 | MsG0880044410.01.T01:intron | 50.0% |
| ! | TCATTCCAAGGCACCTGTTG+TGG | - | Chr8:41573495-41573514 | MsG0880044410.01.T01:exon | 50.0% |
| !! | GAGGTGTGGAGCTGATTTGA+CGG | - | Chr8:41573432-41573451 | MsG0880044410.01.T01:three_prime_UTR | 50.0% |
| AACCACCACAACAGGTGCCT+TGG | + | Chr8:41573503-41573522 | None:intergenic | 55.0% | |
| AACCCGGAAGCTGCCAATGA+GGG | - | Chr8:41574178-41574197 | MsG0880044410.01.T01:intron | 55.0% | |
| AAGAAGAAAGGGGTCGGTGG+CGG | - | Chr8:41573358-41573377 | MsG0880044410.01.T01:three_prime_UTR | 55.0% | |
| ACACCTCTCTGCTTGGCAAC+AGG | + | Chr8:41573419-41573438 | None:intergenic | 55.0% | |
| ATCCCTGCAACCACCACAAC+AGG | + | Chr8:41573511-41573530 | None:intergenic | 55.0% | |
| CACCTCTCTGCTTGGCAACA+GGG | + | Chr8:41573418-41573437 | None:intergenic | 55.0% | |
| CACCTGTTGTGGTGGTTGCA+GGG | - | Chr8:41573506-41573525 | MsG0880044410.01.T01:CDS | 55.0% | |
| CTAAAAGAAGCTGCCGCAGG+CGG | - | Chr8:41574122-41574141 | MsG0880044410.01.T01:intron | 55.0% | |
| CTGGACACAATGAACGGCGT+CGG | - | Chr8:41574149-41574168 | MsG0880044410.01.T01:intron | 55.0% | |
| CTTCCCTCATTGGCAGCTTC+CGG | + | Chr8:41574184-41574203 | None:intergenic | 55.0% | |
| GAGAAGAAGAAAGGGGTCGG+TGG | - | Chr8:41573355-41573374 | MsG0880044410.01.T01:three_prime_UTR | 55.0% | |
| GAGGGAAGCAGTCACAGCAA+AGG | - | Chr8:41574196-41574215 | MsG0880044410.01.T01:intron | 55.0% | |
| GCTGTGACTGCTTCCCTCAT+TGG | + | Chr8:41574194-41574213 | None:intergenic | 55.0% | |
| GCTGTGCAGGTTCCATGACT+TGG | - | Chr8:41574084-41574103 | MsG0880044410.01.T01:intron | 55.0% | |
| GGTGACAGAAGAGAGAGAGC+TGG | + | Chr8:41574337-41574356 | None:intergenic | 55.0% | |
| TAACCCGGAAGCTGCCAATG+AGG | - | Chr8:41574177-41574196 | MsG0880044410.01.T01:intron | 55.0% | |
| TGGGAATCGGCCAATTTGCC+GGG | + | Chr8:41573860-41573879 | None:intergenic | 55.0% | |
| TGTTGCCAAGCAGAGAGGTG+TGG | - | Chr8:41573418-41573437 | MsG0880044410.01.T01:three_prime_UTR | 55.0% | |
| TTCCCTCATTGGCAGCTTCC+GGG | + | Chr8:41574183-41574202 | None:intergenic | 55.0% | |
| TTGTGGTGGTTGCAGGGATG+AGG | - | Chr8:41573512-41573531 | MsG0880044410.01.T01:CDS | 55.0% | |
| ! | ACGGCGTCGGAAAACTAACC+CGG | - | Chr8:41574162-41574181 | MsG0880044410.01.T01:intron | 55.0% |
| ! | TTCCAAGGCACCTGTTGTGG+TGG | - | Chr8:41573498-41573517 | MsG0880044410.01.T01:CDS | 55.0% |
| AGAAGAAAGGGGTCGGTGGC+GGG | - | Chr8:41573359-41573378 | MsG0880044410.01.T01:three_prime_UTR | 60.0% | |
| CACCCTGTTGCCAAGCAGAG+AGG | - | Chr8:41573413-41573432 | MsG0880044410.01.T01:three_prime_UTR | 60.0% | |
| CAGCTCCACACCTCTCTGCT+TGG | + | Chr8:41573426-41573445 | None:intergenic | 60.0% | |
| CTCTCTGCTTGGCAACAGGG+TGG | + | Chr8:41573415-41573434 | None:intergenic | 60.0% | |
| GCACCTGTTGTGGTGGTTGC+AGG | - | Chr8:41573505-41573524 | MsG0880044410.01.T01:CDS | 60.0% | |
| TGGTTGCAGGGATGAGGCAG+AGG | - | Chr8:41573518-41573537 | MsG0880044410.01.T01:CDS | 60.0% | |
| ! | AGAAGAGGAGGAGGTGGTGG+CGG | - | Chr8:41573382-41573401 | MsG0880044410.01.T01:three_prime_UTR | 60.0% |
| AAGAAGCTGCCGCAGGCGGT+TGG | - | Chr8:41574126-41574145 | MsG0880044410.01.T01:intron | 65.0% | |
| GGGAGAAGAGGAGGAGGTGG+TGG | - | Chr8:41573379-41573398 | MsG0880044410.01.T01:three_prime_UTR | 65.0% | |
| TGTGTCCAGCCAACCGCCTG+CGG | + | Chr8:41574138-41574157 | None:intergenic | 65.0% | |
| GGCGGGAGAAGAGGAGGAGG+TGG | - | Chr8:41573376-41573395 | MsG0880044410.01.T01:three_prime_UTR | 70.0% | |
| !! | GGTGGCGGGAGAAGAGGAGG+AGG | - | Chr8:41573373-41573392 | MsG0880044410.01.T01:three_prime_UTR | 70.0% |
| !! | GTCGGTGGCGGGAGAAGAGG+AGG | - | Chr8:41573370-41573389 | MsG0880044410.01.T01:three_prime_UTR | 70.0% |
| AGCTGCCGCAGGCGGTTGGC+TGG | - | Chr8:41574130-41574149 | MsG0880044410.01.T01:intron | 75.0% | |
| !! | GGGGTCGGTGGCGGGAGAAG+AGG | - | Chr8:41573367-41573386 | MsG0880044410.01.T01:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 41573226 | 41574575 | 41573226 | ID=MsG0880044410.01;Name=MsG0880044410.01 |
| Chr8 | mRNA | 41573226 | 41574575 | 41573226 | ID=MsG0880044410.01.T01;Parent=MsG0880044410.01;Name=MsG0880044410.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0|0.5|1|1|1|2|272|174 |
| Chr8 | exon | 41574262 | 41574575 | 41574262 | ID=MsG0880044410.01.T01:exon:16719;Parent=MsG0880044410.01.T01 |
| Chr8 | exon | 41573226 | 41573708 | 41573226 | ID=MsG0880044410.01.T01:exon:16720;Parent=MsG0880044410.01.T01 |
| Chr8 | CDS | 41574262 | 41574575 | 41574262 | ID=MsG0880044410.01.T01:cds;Parent=MsG0880044410.01.T01 |
| Chr8 | CDS | 41573498 | 41573708 | 41573498 | ID=MsG0880044410.01.T01:cds;Parent=MsG0880044410.01.T01 |
| Chr8 | three_prime_UTR | 41573226 | 41573497 | 41573226 | ID=MsG0880044410.01.T01:three_prime_utr;Parent=MsG0880044410.01.T01 |
| Gene Sequence |
| Protein sequence |
