AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036584.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036584.01.T01 MTR_7g014610 83.668 349 57 0 1 349 1 349 0.0 588
MsG0780036584.01.T01 MTR_7g014160 77.364 349 77 2 4 352 5 351 0.0 556
MsG0780036584.01.T01 MTR_7g014620 82.424 330 29 1 20 349 6 306 0.0 536
MsG0780036584.01.T01 MTR_7g014200 72.034 354 88 5 1 352 1 345 0.0 520
MsG0780036584.01.T01 MTR_7g014630 64.426 357 114 5 2 346 3 358 1.67e-154 439
MsG0780036584.01.T01 MTR_7g013850 58.659 358 133 8 1 347 1 354 3.37e-134 392
MsG0780036584.01.T01 MTR_7g014180 73.099 171 46 0 4 174 3 173 4.75e-85 255
MsG0780036584.01.T01 MTR_7g014230 43.305 351 176 9 9 353 5 338 2.88e-83 260
MsG0780036584.01.T01 MTR_7g014330 42.735 351 178 8 9 353 3 336 9.24e-83 259
MsG0780036584.01.T01 MTR_6g015320 42.571 350 173 10 8 354 8 332 9.91e-80 251
MsG0780036584.01.T01 MTR_7g014250 42.450 351 179 10 9 353 3 336 9.29e-79 249
MsG0780036584.01.T01 MTR_6g015850 42.340 359 172 12 1 349 1 334 3.93e-76 242
MsG0780036584.01.T01 MTR_6g015815 43.137 357 174 12 1 349 1 336 6.18e-75 239
MsG0780036584.01.T01 MTR_6g015830 41.389 360 177 14 1 349 1 337 2.34e-72 232
MsG0780036584.01.T01 MTR_6g015315 41.667 348 179 9 9 353 6 332 2.85e-69 224
MsG0780036584.01.T01 MTR_3g028210 35.511 352 195 11 8 347 8 339 7.71e-53 181
MsG0780036584.01.T01 MTR_2g089765 34.795 365 189 13 8 347 16 356 4.65e-50 174
MsG0780036584.01.T01 MTR_7g014360 36.201 279 141 5 78 353 22 266 8.57e-50 171
MsG0780036584.01.T01 MTR_7g015860 33.875 369 192 9 5 347 2 344 6.11e-48 168
MsG0780036584.01.T01 MTR_8g012750 31.967 366 198 13 8 347 3 343 2.00e-42 154
MsG0780036584.01.T01 MTR_6g015310 36.803 269 139 9 64 329 12 252 5.06e-41 147
MsG0780036584.01.T01 MTR_2g089670 31.737 334 194 11 25 347 41 351 4.53e-40 147
MsG0780036584.01.T01 MTR_2g089735 31.988 322 181 11 42 347 39 338 7.75e-40 147
MsG0780036584.01.T01 MTR_3g087640 30.278 360 210 10 9 347 10 349 1.37e-39 146
MsG0780036584.01.T01 MTR_2g089650 31.624 351 195 14 16 347 16 340 9.47e-39 144
MsG0780036584.01.T01 MTR_2g089755 31.657 338 190 13 29 347 37 352 6.68e-37 139
MsG0780036584.01.T01 MTR_3g435300 30.420 286 166 8 9 280 4 270 2.34e-31 120
MsG0780036584.01.T01 MTR_2g089665 28.693 352 162 12 8 347 2 276 2.45e-29 116
MsG0780036584.01.T01 MTR_7g014670 66.667 69 21 1 284 352 71 137 5.77e-26 105
MsG0780036584.01.T01 MTR_8g096530 24.566 346 217 9 4 347 3 306 6.48e-19 87.8
MsG0780036584.01.T01 MTR_7g014310 28.870 239 103 6 116 353 31 203 3.30e-18 84.3
MsG0780036584.01.T01 MTR_7g086000 23.714 350 223 10 7 348 3 316 2.72e-15 77.0
MsG0780036584.01.T01 MTR_3g098980 24.735 283 176 7 67 347 65 312 3.83e-15 76.6
MsG0780036584.01.T01 MTR_8g467580 23.615 343 202 11 19 353 16 306 2.46e-14 74.3
MsG0780036584.01.T01 MTR_4g127650 24.551 334 212 13 15 345 17 313 4.82e-14 73.6
MsG0780036584.01.T01 MTR_4g097090 23.631 347 226 10 16 359 17 327 1.53e-13 72.0
MsG0780036584.01.T01 MTR_7g084910 24.069 349 217 12 3 345 12 318 1.06e-12 69.3
MsG0780036584.01.T01 MTR_3g101960 23.932 351 201 14 18 350 18 320 1.06e-12 69.3
MsG0780036584.01.T01 MTR_7g014340 52.113 71 28 2 9 76 3 70 1.73e-12 63.5
MsG0780036584.01.T01 MTR_3g102020 25.424 354 193 15 18 350 18 321 2.30e-12 68.2
MsG0780036584.01.T01 MTR_3g070170 25.956 366 220 14 4 350 8 341 4.23e-12 67.4
MsG0780036584.01.T01 MTR_4g094828 22.792 351 202 12 25 355 25 326 5.40e-12 67.0
MsG0780036584.01.T01 MTR_7g014220 55.556 54 21 1 25 78 14 64 1.12e-11 60.5
MsG0780036584.01.T01 MTR_7g085990 24.138 290 184 9 68 348 55 317 1.90e-11 65.5
MsG0780036584.01.T01 MTR_3g102010 23.907 343 211 15 18 350 19 321 2.30e-11 65.1
MsG0780036584.01.T01 MTR_7g027175 22.507 351 220 14 7 352 14 317 2.43e-11 65.1
MsG0780036584.01.T01 MTR_7g084940 24.566 346 212 12 8 347 16 318 2.49e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036584.01.T01 AT5G39080 38.920 352 191 10 6 349 3 338 1.14e-68 223
MsG0780036584.01.T01 AT5G39050 40.517 348 187 12 6 347 8 341 5.56e-64 211
MsG0780036584.01.T01 AT3G29590 38.218 348 180 9 5 349 5 320 1.46e-63 209
MsG0780036584.01.T01 AT5G39090 38.728 346 180 10 13 353 9 327 2.02e-62 206
MsG0780036584.01.T01 AT3G29635 37.805 328 178 8 26 350 26 330 1.91e-60 201
MsG0780036584.01.T01 AT3G29680 38.218 348 186 8 1 347 1 320 1.71e-59 199
MsG0780036584.01.T01 AT3G29670 38.820 322 170 8 27 347 27 322 3.67e-58 195
MsG0780036584.01.T01 AT5G61160 34.545 330 192 7 20 347 16 323 7.69e-54 184
MsG0780036584.01.T01 AT1G03940 34.677 372 193 16 9 359 9 351 5.43e-48 169
MsG0780036584.01.T01 AT1G03495 33.518 361 199 13 1 347 1 334 2.96e-47 164
MsG0780036584.01.T01 AT3G29720 30.870 230 116 8 101 311 11 216 3.31e-18 82.8
MsG0780036584.01.T01 AT5G41040 25.085 295 180 13 62 352 63 320 6.53e-14 73.2
MsG0780036584.01.T01 AT5G41040 25.085 295 180 13 62 352 79 336 6.63e-14 73.2
MsG0780036584.01.T01 AT3G47170 23.529 306 194 10 48 345 57 330 1.04e-13 72.4
MsG0780036584.01.T01 AT3G48720 23.885 314 192 12 42 352 41 310 4.28e-13 70.5
MsG0780036584.01.T01 AT5G57840 24.419 344 216 14 8 348 3 305 1.56e-11 65.9
MsG0780036584.01.T01 AT5G63560 22.727 308 189 11 44 347 42 304 2.89e-11 64.7

Find 75 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATACCAAATAACTATTT+TGG 0.143398 7:+10097315 MsG0780036584.01.T01:CDS
AGCAAATGGTATTATCAAAA+TGG 0.196221 7:+10097121 MsG0780036584.01.T01:CDS
CAATTTCCAAAATAGTTATT+TGG 0.203936 7:-10097321 None:intergenic
GAGAGTGAAGATTTGAGAAT+TGG 0.258335 7:-10096502 None:intergenic
CGAACTGAGTCTTCAAGTTT+TGG 0.270251 7:-10097057 None:intergenic
TCACTTTCTTCGACGTATTA+TGG 0.286027 7:+10096392 MsG0780036584.01.T01:CDS
GAGAGGGATTGTTGTGGTTT+GGG 0.289714 7:-10096371 None:intergenic
TAACCTTGATCTGCAATCTA+TGG 0.291297 7:-10097286 None:intergenic
TTTGGGGTATGTTGGATTAT+TGG 0.292562 7:-10096589 None:intergenic
GAAGGGTGTGATTGGGAACT+TGG 0.294736 7:-10096457 None:intergenic
CTTTAGCTGGTAAGATCATT+TGG 0.302896 7:+10096548 MsG0780036584.01.T01:CDS
CCAAAATAGTTATTTGGTAT+TGG 0.316078 7:-10097315 None:intergenic
TGAGAATTGGAACAAGCTTT+TGG 0.323976 7:-10096489 None:intergenic
GATTGTTGTGGTTTGGGTTG+AGG 0.332266 7:-10096365 None:intergenic
AATGTAACACCAAGTTCATT+TGG 0.336977 7:-10096949 None:intergenic
GCAAGGAAACACCATCATTT+GGG 0.342122 7:-10096606 None:intergenic
AGGATGTTCCCAAAGGAAAA+AGG 0.350929 7:+10097000 MsG0780036584.01.T01:CDS
AGCAAGGAAACACCATCATT+TGG 0.361755 7:-10096607 None:intergenic
CAAAGTTGGTGATTCTTCAT+TGG 0.372965 7:-10096881 None:intergenic
GAACAACATTGCAGTGTTCA+TGG 0.374820 7:-10096336 None:intergenic
TGAGAGGGATTGTTGTGGTT+TGG 0.376199 7:-10096372 None:intergenic
TGTTACGCAAAAGCGATTCA+TGG 0.376237 7:+10097225 MsG0780036584.01.T01:CDS
AGAAGAAAGAAGGGTGTGAT+TGG 0.380612 7:-10096465 None:intergenic
AACCATGTTCATCAAAGCTT+GGG 0.382728 7:+10096831 MsG0780036584.01.T01:CDS
AGTTAGAACCTCTATTCAAC+AGG 0.385308 7:+10096911 MsG0780036584.01.T01:CDS
ACACACCATGCTATTCTTGA+TGG 0.393789 7:+10096799 MsG0780036584.01.T01:CDS
GTTGTGGTTTGGGTTGAGGA+TGG 0.408470 7:-10096361 None:intergenic
CAACCATGTTCATCAAAGCT+TGG 0.418659 7:+10096830 MsG0780036584.01.T01:CDS
CACCATCATTTGGGGTATGT+TGG 0.420080 7:-10096597 None:intergenic
CTTCGACGTATTATGGCTAA+AGG 0.433519 7:+10096399 MsG0780036584.01.T01:CDS
GATTATTGGTTGTTGAGATT+CGG 0.435376 7:-10096575 None:intergenic
ATGATTTCCCTGTTGAATAG+AGG 0.441428 7:-10096919 None:intergenic
AACCTTGATCTGCAATCTAT+GGG 0.445561 7:-10097285 None:intergenic
ATGTAACACCAAGTTCATTT+GGG 0.446809 7:-10096948 None:intergenic
GCAAATGGTATTATCAAAAT+GGG 0.448722 7:+10097122 MsG0780036584.01.T01:CDS
TAGAAGAAAACACGTTCTAC+TGG 0.455942 7:-10096427 None:intergenic
AAATAGTTATTTGGTATTGG+TGG 0.459010 7:-10097312 None:intergenic
GTGGTTTGGGTTGAGGATGG+AGG 0.461737 7:-10096358 None:intergenic
TCCCCATAGATTGCAGATCA+AGG 0.465293 7:+10097283 MsG0780036584.01.T01:CDS
ATCAAAGACCCAAATGAACT+TGG 0.475521 7:+10096940 MsG0780036584.01.T01:CDS
GAAGAAAGAAGGGTGTGATT+GGG 0.478690 7:-10096464 None:intergenic
AAGGGTGTGATTGGGAACTT+GGG 0.480787 7:-10096456 None:intergenic
GAACACTTTCTCCCTTTAGC+TGG 0.481894 7:+10096535 MsG0780036584.01.T01:CDS
CAAATGATCTTACCAGCTAA+AGG 0.483763 7:-10096547 None:intergenic
TTTGAACAAGATAAAGCAAA+TGG 0.489572 7:+10097107 MsG0780036584.01.T01:CDS
AAGAATAGCATGGTGTGTAC+TGG 0.504553 7:-10096794 None:intergenic
AAATGATCTTACCAGCTAAA+GGG 0.506511 7:-10096546 None:intergenic
AGCGATTCATGGAGCTGCTA+AGG 0.521717 7:+10097236 MsG0780036584.01.T01:CDS
ACAAAGGTTGATAAAGATTG+TGG 0.527106 7:-10097177 None:intergenic
ATCCAACATACCCCAAATGA+TGG 0.527410 7:+10096595 MsG0780036584.01.T01:CDS
TCTAACTCAGGTAACAAAGT+TGG 0.547505 7:-10096895 None:intergenic
GTGTGATTGGGAACTTGGGA+GGG 0.559809 7:-10096452 None:intergenic
TTGAATAGAGGTTCTAACTC+AGG 0.567057 7:-10096907 None:intergenic
TCTTCTTCTATAAAGTCCGA+TGG 0.576895 7:-10097371 None:intergenic
CTAAAGGGAGAAAGTGTTCG+AGG 0.579709 7:-10096531 None:intergenic
AGCCCAAGCTTTGATGAACA+TGG 0.596193 7:-10096833 None:intergenic
GTTGCACTGAGATCTTATCC+AGG 0.604812 7:+10096980 MsG0780036584.01.T01:CDS
GTTGGACTCTGCAATGAGCA+AGG 0.605899 7:-10096623 None:intergenic
GGTGTGATTGGGAACTTGGG+AGG 0.616734 7:-10096453 None:intergenic
ATTGGTTGTTGAGATTCGGA+AGG 0.623030 7:-10096571 None:intergenic
GACTTGATCGAAATCAACGT+TGG 0.624305 7:-10096641 None:intergenic
GAAAGTGAGAGGGATTGTTG+TGG 0.628565 7:-10096377 None:intergenic
GAATCTGCGGATTCCAAATG+CGG 0.634455 7:-10096709 None:intergenic
AATACGTCGAAGAAAGTGAG+AGG 0.635541 7:-10096388 None:intergenic
AATAGAAGCAAAAGAATCTG+CGG 0.642981 7:-10096722 None:intergenic
CTTATCCAGGATGTTCCCAA+AGG 0.644668 7:+10096993 MsG0780036584.01.T01:CDS
ATGGTGTGTACTGGTTCCAA+TGG 0.651004 7:-10096785 None:intergenic
TAAAGGGAGAAAGTGTTCGA+GGG 0.656830 7:-10096530 None:intergenic
CAAGGAAACACCATCATTTG+GGG 0.665742 7:-10096605 None:intergenic
TTCAAGCGTGAGTTTGAACG+TGG 0.666208 7:-10097082 None:intergenic
ATACGTCGAAGAAAGTGAGA+GGG 0.677965 7:-10096387 None:intergenic
CGAGACAAAGAAGCTTCATG+AGG 0.679550 7:-10096676 None:intergenic
ACCTTGATCTGCAATCTATG+GGG 0.692544 7:-10097284 None:intergenic
GTTAGAACCTCTATTCAACA+GGG 0.701022 7:+10096912 MsG0780036584.01.T01:CDS
ATAAGCACAAGTGAGAACAA+AGG 0.714865 7:-10097193 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATTTCCAAAATAGTTATT+TGG - Chr7:10097324-10097343 None:intergenic 20.0%
!!! AAAAACCACTTTTTTGAAAA+AGG - Chr7:10096765-10096784 None:intergenic 20.0%
!!! AAAACCACTTTTTTGAAAAA+GGG - Chr7:10096764-10096783 None:intergenic 20.0%
!!! TTTTATTGATACAAATCCAT+CGG + Chr7:10097355-10097374 MsG0780036584.01.T01:CDS 20.0%
! AGCAAATGGTATTATCAAAA+TGG + Chr7:10097121-10097140 MsG0780036584.01.T01:CDS 25.0%
! CCAAAATAGTTATTTGGTAT+TGG - Chr7:10097318-10097337 None:intergenic 25.0%
! GCAAATGGTATTATCAAAAT+GGG + Chr7:10097122-10097141 MsG0780036584.01.T01:CDS 25.0%
! TTTGAACAAGATAAAGCAAA+TGG + Chr7:10097107-10097126 MsG0780036584.01.T01:CDS 25.0%
!! AAATAGTTATTTGGTATTGG+TGG - Chr7:10097315-10097334 None:intergenic 25.0%
!! CCAATACCAAATAACTATTT+TGG + Chr7:10097315-10097334 MsG0780036584.01.T01:CDS 25.0%
!!! ACTATTTTGGAAATTGTGTT+TGG + Chr7:10097328-10097347 MsG0780036584.01.T01:CDS 25.0%
!!! ATAACCCTTTTTCAAAAAAG+TGG + Chr7:10096757-10096776 MsG0780036584.01.T01:CDS 25.0%
!!! CTATTTTGGAAATTGTGTTT+GGG + Chr7:10097329-10097348 MsG0780036584.01.T01:CDS 25.0%
!!! TATTTTGGAAATTGTGTTTG+GGG + Chr7:10097330-10097349 MsG0780036584.01.T01:CDS 25.0%
AAATGATCTTACCAGCTAAA+GGG - Chr7:10096549-10096568 None:intergenic 30.0%
AATAGAAGCAAAAGAATCTG+CGG - Chr7:10096725-10096744 None:intergenic 30.0%
AATGTAACACCAAGTTCATT+TGG - Chr7:10096952-10096971 None:intergenic 30.0%
ATGTAACACCAAGTTCATTT+GGG - Chr7:10096951-10096970 None:intergenic 30.0%
! ATTTTCCATCAAGAATAGCA+TGG - Chr7:10096807-10096826 None:intergenic 30.0%
! CAAAAAAGTGGTTTTTCCAT+TGG + Chr7:10096769-10096788 MsG0780036584.01.T01:CDS 30.0%
! GATTATTGGTTGTTGAGATT+CGG - Chr7:10096578-10096597 None:intergenic 30.0%
!! ACAAAGGTTGATAAAGATTG+TGG - Chr7:10097180-10097199 None:intergenic 30.0%
AACCATGTTCATCAAAGCTT+GGG + Chr7:10096831-10096850 MsG0780036584.01.T01:CDS 35.0%
AACCTTGATCTGCAATCTAT+GGG - Chr7:10097288-10097307 None:intergenic 35.0%
AGTTAGAACCTCTATTCAAC+AGG + Chr7:10096911-10096930 MsG0780036584.01.T01:CDS 35.0%
ATAAGCACAAGTGAGAACAA+AGG - Chr7:10097196-10097215 None:intergenic 35.0%
ATCAAAGACCCAAATGAACT+TGG + Chr7:10096940-10096959 MsG0780036584.01.T01:CDS 35.0%
ATGATTTCCCTGTTGAATAG+AGG - Chr7:10096922-10096941 None:intergenic 35.0%
CAAATGATCTTACCAGCTAA+AGG - Chr7:10096550-10096569 None:intergenic 35.0%
CTTTAGCTGGTAAGATCATT+TGG + Chr7:10096548-10096567 MsG0780036584.01.T01:CDS 35.0%
GAGAGTGAAGATTTGAGAAT+TGG - Chr7:10096505-10096524 None:intergenic 35.0%
GTTAGAACCTCTATTCAACA+GGG + Chr7:10096912-10096931 MsG0780036584.01.T01:CDS 35.0%
TAACCTTGATCTGCAATCTA+TGG - Chr7:10097289-10097308 None:intergenic 35.0%
TAGAAGAAAACACGTTCTAC+TGG - Chr7:10096430-10096449 None:intergenic 35.0%
TCACTTTCTTCGACGTATTA+TGG + Chr7:10096392-10096411 MsG0780036584.01.T01:CDS 35.0%
TCTAACTCAGGTAACAAAGT+TGG - Chr7:10096898-10096917 None:intergenic 35.0%
! GTTCGTTTCCTTTTTCCTTT+GGG - Chr7:10097011-10097030 None:intergenic 35.0%
! TCGTTCTTTTATACCGCATT+TGG + Chr7:10096696-10096715 MsG0780036584.01.T01:CDS 35.0%
! TGAGAATTGGAACAAGCTTT+TGG - Chr7:10096492-10096511 None:intergenic 35.0%
! TGTTCGTTTCCTTTTTCCTT+TGG - Chr7:10097012-10097031 None:intergenic 35.0%
! TTGAATAGAGGTTCTAACTC+AGG - Chr7:10096910-10096929 None:intergenic 35.0%
! TTTGGGGTATGTTGGATTAT+TGG - Chr7:10096592-10096611 None:intergenic 35.0%
!! AGCTTTTGGAAGAAGAAAGA+AGG - Chr7:10096478-10096497 None:intergenic 35.0%
!! CAAAGTTGGTGATTCTTCAT+TGG - Chr7:10096884-10096903 None:intergenic 35.0%
!! GCTTTTGGAAGAAGAAAGAA+GGG - Chr7:10096477-10096496 None:intergenic 35.0%
AAGAATAGCATGGTGTGTAC+TGG - Chr7:10096797-10096816 None:intergenic 40.0%
AATACGTCGAAGAAAGTGAG+AGG - Chr7:10096391-10096410 None:intergenic 40.0%
ACACACCATGCTATTCTTGA+TGG + Chr7:10096799-10096818 MsG0780036584.01.T01:CDS 40.0%
ACCTTGATCTGCAATCTATG+GGG - Chr7:10097287-10097306 None:intergenic 40.0%
AGCAAGGAAACACCATCATT+TGG - Chr7:10096610-10096629 None:intergenic 40.0%
AGGATGTTCCCAAAGGAAAA+AGG + Chr7:10097000-10097019 MsG0780036584.01.T01:CDS 40.0%
ATACGTCGAAGAAAGTGAGA+GGG - Chr7:10096390-10096409 None:intergenic 40.0%
ATCCAACATACCCCAAATGA+TGG + Chr7:10096595-10096614 MsG0780036584.01.T01:CDS 40.0%
ATTGGTTGTTGAGATTCGGA+AGG - Chr7:10096574-10096593 None:intergenic 40.0%
CAACCATGTTCATCAAAGCT+TGG + Chr7:10096830-10096849 MsG0780036584.01.T01:CDS 40.0%
CAAGGAAACACCATCATTTG+GGG - Chr7:10096608-10096627 None:intergenic 40.0%
CTTCGACGTATTATGGCTAA+AGG + Chr7:10096399-10096418 MsG0780036584.01.T01:CDS 40.0%
GAACAACATTGCAGTGTTCA+TGG - Chr7:10096339-10096358 None:intergenic 40.0%
GACTTGATCGAAATCAACGT+TGG - Chr7:10096644-10096663 None:intergenic 40.0%
GCAAGGAAACACCATCATTT+GGG - Chr7:10096609-10096628 None:intergenic 40.0%
TGTTACGCAAAAGCGATTCA+TGG + Chr7:10097225-10097244 MsG0780036584.01.T01:CDS 40.0%
! AGAAGAAAGAAGGGTGTGAT+TGG - Chr7:10096468-10096487 None:intergenic 40.0%
! GAAGAAAGAAGGGTGTGATT+GGG - Chr7:10096467-10096486 None:intergenic 40.0%
!! CGAACTGAGTCTTCAAGTTT+TGG - Chr7:10097060-10097079 None:intergenic 40.0%
!! TAAAGGGAGAAAGTGTTCGA+GGG - Chr7:10096533-10096552 None:intergenic 40.0%
!! TTTTTCCTTTGGGAACATCC+TGG - Chr7:10097001-10097020 None:intergenic 40.0%
CGAGACAAAGAAGCTTCATG+AGG - Chr7:10096679-10096698 None:intergenic 45.0%
CTTATCCAGGATGTTCCCAA+AGG + Chr7:10096993-10097012 MsG0780036584.01.T01:CDS 45.0%
GAAAGTGAGAGGGATTGTTG+TGG - Chr7:10096380-10096399 None:intergenic 45.0%
GAACACTTTCTCCCTTTAGC+TGG + Chr7:10096535-10096554 MsG0780036584.01.T01:CDS 45.0%
GAATCTGCGGATTCCAAATG+CGG - Chr7:10096712-10096731 None:intergenic 45.0%
GAGAGGGATTGTTGTGGTTT+GGG - Chr7:10096374-10096393 None:intergenic 45.0%
GTTGCACTGAGATCTTATCC+AGG + Chr7:10096980-10096999 MsG0780036584.01.T01:CDS 45.0%
TCCCCATAGATTGCAGATCA+AGG + Chr7:10097283-10097302 MsG0780036584.01.T01:CDS 45.0%
TGAGAGGGATTGTTGTGGTT+TGG - Chr7:10096375-10096394 None:intergenic 45.0%
TTCAAGCGTGAGTTTGAACG+TGG - Chr7:10097085-10097104 None:intergenic 45.0%
! AAGGGTGTGATTGGGAACTT+GGG - Chr7:10096459-10096478 None:intergenic 45.0%
! AGCCCAAGCTTTGATGAACA+TGG - Chr7:10096836-10096855 None:intergenic 45.0%
! CACCATCATTTGGGGTATGT+TGG - Chr7:10096600-10096619 None:intergenic 45.0%
!! ATGGTGTGTACTGGTTCCAA+TGG - Chr7:10096788-10096807 None:intergenic 45.0%
!! CTAAAGGGAGAAAGTGTTCG+AGG - Chr7:10096534-10096553 None:intergenic 45.0%
!! GATTGTTGTGGTTTGGGTTG+AGG - Chr7:10096368-10096387 None:intergenic 45.0%
AGCGATTCATGGAGCTGCTA+AGG + Chr7:10097236-10097255 MsG0780036584.01.T01:CDS 50.0%
GTGTGATTGGGAACTTGGGA+GGG - Chr7:10096455-10096474 None:intergenic 50.0%
GTTGGACTCTGCAATGAGCA+AGG - Chr7:10096626-10096645 None:intergenic 50.0%
! GAAGGGTGTGATTGGGAACT+TGG - Chr7:10096460-10096479 None:intergenic 50.0%
!! GTTGTGGTTTGGGTTGAGGA+TGG - Chr7:10096364-10096383 None:intergenic 50.0%
GGTGTGATTGGGAACTTGGG+AGG - Chr7:10096456-10096475 None:intergenic 55.0%
!! GTGGTTTGGGTTGAGGATGG+AGG - Chr7:10096361-10096380 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 10096307 10097386 10096307 ID=MsG0780036584.01;Name=MsG0780036584.01
Chr7 mRNA 10096307 10097386 10096307 ID=MsG0780036584.01.T01;Parent=MsG0780036584.01;Name=MsG0780036584.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|359
Chr7 exon 10096307 10097386 10096307 ID=MsG0780036584.01.T01:exon:10373;Parent=MsG0780036584.01.T01
Chr7 CDS 10096307 10097386 10096307 ID=MsG0780036584.01.T01:cds;Parent=MsG0780036584.01.T01
Gene Sequence

>MsG0780036584.01.T01

ATGGCTTTAAACAACAACAACATCAAAATCCATGAACACTGCAATGTTGTTCCTCCATCCTCAACCCAAACCACAACAATCCCTCTCACTTTCTTCGACGTATTATGGCTAAAGGTGTATCCAGTAGAACGTGTTTTCTTCTACACCCTCCCAAGTTCCCAATCACACCCTTCTTTCTTCTTCCAAAAGCTTGTTCCAATTCTCAAATCTTCACTCTCTTTAACCCTCGAACACTTTCTCCCTTTAGCTGGTAAGATCATTTGGCCTTCCGAATCTCAACAACCAATAATCCAACATACCCCAAATGATGGTGTTTCCTTGCTCATTGCAGAGTCCAACGTTGATTTCGATCAAGTCATTGAAAGCTCACCTCATGAAGCTTCTTTGTCTCGTTCTTTTATACCGCATTTGGAATCCGCAGATTCTTTTGCTTCTATTATTTCAATTCAGATAACCCTTTTTCAAAAAAGTGGTTTTTCCATTGGAACCAGTACACACCATGCTATTCTTGATGGAAAATCTTCAACCATGTTCATCAAAGCTTGGGCTTATTTATGCAACAAAGCAATTGAAACCAATGAAGAATCACCAACTTTGTTACCTGAGTTAGAACCTCTATTCAACAGGGAAATCATCAAAGACCCAAATGAACTTGGTGTTACATTCACAAATAGTTGCACTGAGATCTTATCCAGGATGTTCCCAAAGGAAAAAGGAAACGAACATAGCTTAAATATTTTACACTTTGAACCAAAACTTGAAGACTCAGTTCGTGCCACGTTCAAACTCACGCTTGAAGATTTGAACAAGATAAAGCAAATGGTATTATCAAAATGGGAAGTTGTTGATAAAAATGAATCAAATTCAAAGCCACAATCTTTATCAACCTTTGTTCTCACTTGTGCTTATTCACTCGTTTGTTACGCAAAAGCGATTCATGGAGCTGCTAAGGAGAAAGAGAAGTTTTCTTTTGCTTTCCCCATAGATTGCAGATCAAGGTTAGAACCACCAATACCAAATAACTATTTTGGAAATTGTGTTTGGGGCATTTTATTGATACAAATCCATCGGACTTTATAG

Protein sequence

>MsG0780036584.01.T01

MALNNNNIKIHEHCNVVPPSSTQTTTIPLTFFDVLWLKVYPVERVFFYTLPSSQSHPSFFFQKLVPILKSSLSLTLEHFLPLAGKIIWPSESQQPIIQHTPNDGVSLLIAESNVDFDQVIESSPHEASLSRSFIPHLESADSFASIISIQITLFQKSGFSIGTSTHHAILDGKSSTMFIKAWAYLCNKAIETNEESPTLLPELEPLFNREIIKDPNELGVTFTNSCTEILSRMFPKEKGNEHSLNILHFEPKLEDSVRATFKLTLEDLNKIKQMVLSKWEVVDKNESNSKPQSLSTFVLTCAYSLVCYAKAIHGAAKEKEKFSFAFPIDCRSRLEPPIPNNYFGNCVWGILLIQIHRTL*