AlfalfaGEDB | MsG0780041755.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041755.01

KEGG: -
GO: -
PFAM: PF13639

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041755.01.T01	RHN49540.1	96.739	92	3	0	1	92	73	164	3.60E-58	186

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041755.01.T01	Q9SKK8	64.634	82	26	2	2	83	296	374	3.69E-31	115

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041755.01.T01	A0A396H8E5	96.739	92	3	0	1	92	73	164	1.72e-58	186

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049066.01	MsG0780041755.01	-0.801233	9.915935e-49	4.711217e-46
MsG0180001800.01	MsG0780041755.01	0.815003	1.154877e-51	7.868433e-49
MsG0180003980.01	MsG0780041755.01	-0.801929	7.139938e-49	3.452405e-46
MsG0780041755.01	MsG0880042740.01	0.810516	1.108803e-50	6.697481e-48
MsG0780041755.01	MsG0880043364.01	0.811106	8.263360e-51	5.070506e-48
MsG0780041755.01	MsG0880045968.01	-0.806102	9.680859e-50	5.209671e-47
MsG0480019183.01	MsG0780041755.01	-0.802599	5.196262e-49	2.555909e-46
MsG0480023152.01	MsG0780041755.01	-0.800311	1.529921e-48	7.101142e-46
MsG0480023818.01	MsG0780041755.01	-0.802649	5.074829e-49	2.499242e-46
MsG0480023850.01	MsG0780041755.01	-0.803746	3.009267e-49	1.524237e-46
MsG0580025961.01	MsG0780041755.01	0.816573	5.159003e-52	3.669040e-49
MsG0380015659.01	MsG0780041755.01	0.803488	3.404398e-49	1.712989e-46
MsG0380016229.01	MsG0780041755.01	-0.802146	6.443301e-49	3.132851e-46
MsG0380017928.01	MsG0780041755.01	-0.801433	9.024390e-49	4.309208e-46
MsG0580027752.01	MsG0780041755.01	0.805583	1.244886e-49	6.610627e-47
MsG0780039382.01	MsG0780041755.01	-0.807096	5.973722e-50	3.297705e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041755.01.T01	MTR_7g117350	96.739	92	3	0	1	92	287	378	2.37e-60	188
MsG0780041755.01.T01	MTR_7g117350	96.739	92	3	0	1	92	279	370	2.57e-60	188
MsG0780041755.01.T01	MTR_8g027745	76.543	81	15	2	4	84	286	362	1.22e-38	132
MsG0780041755.01.T01	MTR_3g012550	59.756	82	29	1	3	84	79	156	2.67e-33	113
MsG0780041755.01.T01	MTR_8g099515	63.291	79	25	2	3	81	308	382	2.98e-28	105
MsG0780041755.01.T01	MTR_8g099495	55.294	85	34	1	3	87	318	398	3.25e-25	97.1
MsG0780041755.01.T01	MTR_3g091200	53.846	78	32	1	4	81	303	376	1.57e-24	95.1
MsG0780041755.01.T01	MTR_5g009210	55.696	79	31	1	3	81	286	360	1.89e-23	91.7
MsG0780041755.01.T01	MTR_5g009190	55.696	79	31	1	3	81	265	339	3.13e-23	90.9
MsG0780041755.01.T01	MTR_5g009200	55.696	79	31	1	3	81	321	395	1.46e-22	89.7
MsG0780041755.01.T01	MTR_1g056350	42.857	84	45	1	1	84	71	151	5.14e-22	84.3
MsG0780041755.01.T01	MTR_8g028465	43.902	82	38	2	3	84	89	162	8.80e-20	79.7
MsG0780041755.01.T01	MTR_7g079280	45.122	82	41	2	3	84	79	156	4.52e-19	77.0
MsG0780041755.01.T01	MTR_7g079290	40.741	81	46	2	4	84	125	203	2.63e-17	73.2
MsG0780041755.01.T01	MTR_1g090480	53.061	49	23	0	36	84	102	150	8.69e-16	68.6
MsG0780041755.01.T01	MTR_2g044570	48.148	54	28	0	33	86	80	133	1.67e-15	69.7
MsG0780041755.01.T01	MTR_1g070425	40.789	76	42	1	4	79	68	140	1.92e-15	67.8
MsG0780041755.01.T01	MTR_3g100400	37.647	85	47	2	4	88	130	208	2.08e-15	70.1
MsG0780041755.01.T01	MTR_7g116220	39.474	76	43	1	4	79	70	142	2.32e-15	67.4
MsG0780041755.01.T01	MTR_7g116180	40.789	76	42	1	4	79	67	139	2.36e-15	67.4
MsG0780041755.01.T01	MTR_1g492830	60.000	45	18	0	36	80	88	132	3.91e-15	67.8
MsG0780041755.01.T01	MTR_8g032690	65.116	43	15	0	36	78	19	61	4.80e-15	65.1
MsG0780041755.01.T01	MTR_7g113800	40.909	88	43	3	4	87	91	173	7.23e-15	68.2
MsG0780041755.01.T01	MTR_8g009190	48.529	68	31	1	21	88	94	157	7.24e-15	68.2
MsG0780041755.01.T01	MTR_5g064990	42.500	80	43	2	4	83	114	190	1.09e-14	67.8
MsG0780041755.01.T01	MTR_1g082550	39.560	91	50	3	4	92	98	185	1.37e-14	67.4
MsG0780041755.01.T01	MTR_1g070140	37.975	79	44	1	4	82	103	176	2.53e-14	66.6
MsG0780041755.01.T01	MTR_7g076250	58.140	43	18	0	36	78	90	132	3.71e-14	64.7
MsG0780041755.01.T01	MTR_8g066780	35.632	87	52	1	3	89	113	195	4.65e-14	65.9
MsG0780041755.01.T01	MTR_3g110190	51.163	43	21	0	36	78	92	134	1.10e-13	65.1
MsG0780041755.01.T01	MTR_1g074190	37.805	82	41	2	4	80	99	175	1.38e-13	64.7
MsG0780041755.01.T01	MTR_1g090460	51.020	49	24	0	36	84	95	143	1.43e-13	62.4
MsG0780041755.01.T01	MTR_5g026720	45.455	55	30	0	30	84	87	141	1.50e-13	62.4
MsG0780041755.01.T01	MTR_7g116200	45.000	60	29	1	24	79	77	136	1.68e-13	62.4
MsG0780041755.01.T01	MTR_4g056590	38.462	78	39	1	1	78	97	165	1.87e-13	62.8
MsG0780041755.01.T01	MTR_6g087150	38.750	80	33	2	4	78	93	161	1.97e-13	64.3
MsG0780041755.01.T01	MTR_7g116210	54.545	44	20	0	36	79	35	78	2.06e-13	60.8
MsG0780041755.01.T01	MTR_2g090905	31.646	79	54	0	5	83	40	118	2.50e-13	61.2
MsG0780041755.01.T01	MTR_3g099650	37.333	75	44	1	4	78	107	178	2.67e-13	63.9
MsG0780041755.01.T01	MTR_5g092750	46.667	45	24	0	35	79	184	228	3.39e-13	62.8
MsG0780041755.01.T01	MTR_6g055030	34.667	75	46	1	4	78	97	168	3.48e-13	63.5
MsG0780041755.01.T01	MTR_3g095560	36.000	75	43	1	4	78	109	178	3.72e-13	62.8
MsG0780041755.01.T01	MTR_5g092790	43.137	51	28	1	35	85	184	233	4.26e-13	62.4
MsG0780041755.01.T01	MTR_5g026730	47.273	55	28	1	31	84	88	142	5.46e-13	61.2
MsG0780041755.01.T01	MTR_2g079320	38.356	73	34	1	18	79	130	202	5.71e-13	61.6
MsG0780041755.01.T01	MTR_3g091620	38.095	84	36	2	1	79	98	170	6.40e-13	62.8
MsG0780041755.01.T01	MTR_4g106960	47.368	57	29	1	36	92	235	290	6.59e-13	62.8
MsG0780041755.01.T01	MTR_4g106960	47.368	57	29	1	36	92	235	290	8.38e-13	62.4
MsG0780041755.01.T01	MTR_5g064980	35.000	80	49	1	4	83	108	184	8.56e-13	62.4
MsG0780041755.01.T01	MTR_3g078470	34.211	76	46	1	4	79	76	147	1.24e-12	61.2
MsG0780041755.01.T01	MTR_6g007737	40.260	77	40	2	4	80	133	203	1.28e-12	62.0
MsG0780041755.01.T01	MTR_3g086700	45.283	53	29	0	32	84	71	123	1.32e-12	60.5
MsG0780041755.01.T01	MTR_4g106960	47.368	57	29	1	36	92	178	233	1.33e-12	62.0
MsG0780041755.01.T01	MTR_5g030010	36.559	93	47	2	4	90	122	208	1.34e-12	62.0
MsG0780041755.01.T01	MTR_6g055030	48.889	45	23	0	34	78	93	137	1.45e-12	61.6
MsG0780041755.01.T01	MTR_8g092985	34.211	76	45	1	4	79	111	181	1.62e-12	60.5
MsG0780041755.01.T01	MTR_4g106960	47.368	57	29	1	36	92	178	233	1.64e-12	61.6
MsG0780041755.01.T01	MTR_2g055790	41.667	72	36	2	19	84	77	148	1.66e-12	60.5
MsG0780041755.01.T01	MTR_8g092840	34.211	76	45	1	4	79	113	183	1.73e-12	60.8
MsG0780041755.01.T01	MTR_3g078450	34.211	76	46	1	4	79	76	147	1.93e-12	60.5
MsG0780041755.01.T01	MTR_3g086730	45.283	53	29	0	32	84	71	123	2.09e-12	60.5
MsG0780041755.01.T01	MTR_8g092960	34.211	76	45	1	4	79	103	173	2.19e-12	60.5
MsG0780041755.01.T01	MTR_8g092930	34.211	76	45	1	4	79	112	182	2.46e-12	60.5
MsG0780041755.01.T01	MTR_3g071300	35.897	78	48	2	3	80	75	150	2.61e-12	59.3
MsG0780041755.01.T01	MTR_7g073200	36.709	79	44	1	2	80	79	151	2.72e-12	59.7
MsG0780041755.01.T01	MTR_4g106680	34.884	86	40	2	4	84	106	180	2.86e-12	60.8
MsG0780041755.01.T01	MTR_8g093010	34.211	76	45	1	4	79	107	177	3.79e-12	59.7
MsG0780041755.01.T01	MTR_1g043410	36.709	79	47	1	4	82	94	169	3.80e-12	60.5
MsG0780041755.01.T01	MTR_2g436100	36.250	80	45	2	4	83	93	166	4.03e-12	60.5
MsG0780041755.01.T01	MTR_8g063660	48.889	45	23	0	36	80	94	138	4.10e-12	60.5
MsG0780041755.01.T01	MTR_2g041200	50.000	48	24	0	36	83	109	156	4.47e-12	58.9
MsG0780041755.01.T01	MTR_3g116000	39.474	76	39	2	4	79	79	147	4.58e-12	59.3
MsG0780041755.01.T01	MTR_5g066250	39.623	53	32	0	36	88	160	212	4.66e-12	60.5
MsG0780041755.01.T01	MTR_5g034790	48.889	45	23	0	36	80	142	186	4.83e-12	60.5
MsG0780041755.01.T01	MTR_2g090950	31.250	80	55	0	4	83	91	170	5.24e-12	59.7
MsG0780041755.01.T01	MTR_8g089880	39.474	76	40	3	3	78	126	195	6.41e-12	59.7
MsG0780041755.01.T01	MTR_4g093830	40.000	75	39	2	4	78	126	194	6.61e-12	60.1
MsG0780041755.01.T01	MTR_5g064890	39.474	76	40	3	3	78	127	196	8.11e-12	59.7
MsG0780041755.01.T01	MTR_4g030070	41.538	65	34	1	24	84	94	158	8.96e-12	58.9
MsG0780041755.01.T01	MTR_7g096690	35.366	82	45	2	4	82	70	146	1.09e-11	59.3
MsG0780041755.01.T01	MTR_2g009310	49.057	53	26	1	26	78	152	203	1.17e-11	59.3
MsG0780041755.01.T01	MTR_1g100737	46.667	45	24	0	36	80	123	167	1.38e-11	57.8
MsG0780041755.01.T01	MTR_5g024730	38.158	76	43	1	4	79	77	148	1.58e-11	58.2
MsG0780041755.01.T01	MTR_4g129420	48.837	43	22	0	36	78	144	186	3.12e-11	58.2
MsG0780041755.01.T01	MTR_4g120270	36.000	75	40	1	4	78	80	146	3.99e-11	57.4
MsG0780041755.01.T01	MTR_3g067995	48.980	49	24	1	30	78	207	254	4.01e-11	57.4
MsG0780041755.01.T01	MTR_8g028815	36.364	66	36	2	24	83	75	140	4.14e-11	56.2
MsG0780041755.01.T01	MTR_1g090450	46.341	41	22	0	40	80	111	151	4.26e-11	55.8
MsG0780041755.01.T01	MTR_1g090440	51.220	41	20	0	40	80	120	160	4.42e-11	56.2
MsG0780041755.01.T01	MTR_1g066430	36.250	80	45	1	4	83	625	698	6.13e-11	57.4
MsG0780041755.01.T01	MTR_6g007680	49.020	51	25	1	36	86	66	115	6.55e-11	55.5
MsG0780041755.01.T01	MTR_4g063070	41.860	43	25	0	36	78	336	378	7.49e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041755.01.T01	AT5G07040	56.471	85	33	1	1	85	63	143	7.19e-33	112
MsG0780041755.01.T01	AT2G25410	64.634	82	26	2	2	83	296	374	3.76e-32	115
MsG0780041755.01.T01	AT2G46495	63.415	82	27	1	4	85	263	341	1.29e-31	113
MsG0780041755.01.T01	AT5G53110	67.089	79	22	2	3	81	301	375	1.30e-31	114
MsG0780041755.01.T01	AT2G46495	61.176	85	30	1	1	85	288	369	1.55e-31	113
MsG0780041755.01.T01	AT1G28040	65.823	79	23	2	4	82	225	299	2.09e-30	109
MsG0780041755.01.T01	AT2G46493	60.759	79	27	2	2	80	108	182	1.04e-27	99.4
MsG0780041755.01.T01	AT2G46494	59.740	77	27	2	4	80	288	360	7.73e-25	95.5
MsG0780041755.01.T01	AT2G35910	49.383	81	35	2	4	84	121	195	6.47e-24	90.5
MsG0780041755.01.T01	AT5G06490	44.444	90	49	1	3	91	95	184	1.27e-23	89.4
MsG0780041755.01.T01	AT3G61550	47.674	86	40	2	4	84	99	184	2.54e-22	86.3
MsG0780041755.01.T01	AT2G46160	45.238	84	44	1	3	84	103	186	5.42e-19	77.8
MsG0780041755.01.T01	AT2G46160	45.238	84	44	1	3	84	103	186	5.42e-19	77.8
MsG0780041755.01.T01	AT5G36001	63.830	47	17	0	36	82	264	310	3.89e-18	77.0
MsG0780041755.01.T01	AT4G09100	41.975	81	42	2	4	83	56	132	9.34e-18	72.8
MsG0780041755.01.T01	AT2G42350	41.573	89	43	2	2	89	73	153	2.51e-16	70.9
MsG0780041755.01.T01	AT4G09120	39.785	93	49	2	2	90	92	181	3.61e-16	72.0
MsG0780041755.01.T01	AT5G27420	40.230	87	40	3	4	83	95	176	4.65e-16	71.6
MsG0780041755.01.T01	AT4G09110	41.975	81	44	1	2	82	92	169	6.21e-16	70.9
MsG0780041755.01.T01	AT4G09130	43.590	78	41	2	1	78	88	162	7.66e-16	70.9
MsG0780041755.01.T01	AT5G05810	38.824	85	46	2	4	88	120	198	1.43e-15	70.5
MsG0780041755.01.T01	AT3G05200	40.789	76	40	2	4	78	99	170	1.82e-15	70.1
MsG0780041755.01.T01	AT3G48030	52.000	50	24	0	36	85	207	256	2.31e-15	69.7
MsG0780041755.01.T01	AT4G28890	40.506	79	41	1	4	82	97	169	3.24e-15	69.3
MsG0780041755.01.T01	AT5G40250	49.057	53	26	1	36	87	143	195	4.44e-15	68.9
MsG0780041755.01.T01	AT3G18930	38.272	81	46	2	4	80	120	200	1.13e-14	67.8
MsG0780041755.01.T01	AT3G18930	38.272	81	46	2	4	80	120	200	1.13e-14	67.8
MsG0780041755.01.T01	AT3G18930	38.272	81	46	2	4	80	120	200	1.13e-14	67.8
MsG0780041755.01.T01	AT2G20030	42.857	77	36	3	4	79	98	167	1.30e-14	67.8
MsG0780041755.01.T01	AT1G35330	40.000	80	45	1	4	83	100	176	1.58e-14	67.4
MsG0780041755.01.T01	AT3G48030	36.782	87	40	2	4	85	102	178	2.05e-14	66.6
MsG0780041755.01.T01	AT1G22500	39.535	86	47	3	4	87	89	171	2.27e-14	67.0
MsG0780041755.01.T01	AT1G32361	44.737	76	34	1	3	78	129	196	2.81e-14	66.6
MsG0780041755.01.T01	AT5G57750	36.842	76	43	2	5	80	96	166	4.49e-14	64.7
MsG0780041755.01.T01	AT4G40070	43.038	79	42	2	2	80	93	168	6.60e-14	65.5
MsG0780041755.01.T01	AT1G49200	40.000	75	40	1	4	78	109	178	6.83e-14	64.7
MsG0780041755.01.T01	AT1G72200	40.449	89	48	3	4	90	115	200	7.39e-14	65.5
MsG0780041755.01.T01	AT1G04360	42.683	82	42	2	4	82	101	180	1.55e-13	64.7
MsG0780041755.01.T01	AT1G49210	38.667	75	41	1	4	78	108	177	1.79e-13	63.5
MsG0780041755.01.T01	AT1G14200	41.667	72	34	2	7	78	87	150	2.35e-13	62.4
MsG0780041755.01.T01	AT1G49220	38.158	76	42	1	4	79	108	178	2.51e-13	63.5
MsG0780041755.01.T01	AT5G43420	38.636	88	36	3	4	78	98	180	3.11e-13	63.9
MsG0780041755.01.T01	AT3G03550	39.189	74	39	2	5	78	134	201	3.28e-13	63.5
MsG0780041755.01.T01	AT4G33565	50.980	51	24	1	28	78	210	259	3.38e-13	63.5
MsG0780041755.01.T01	AT5G17600	39.080	87	41	3	4	84	116	196	4.01e-13	63.5
MsG0780041755.01.T01	AT2G35420	42.667	75	37	2	4	78	77	145	5.30e-13	62.4
MsG0780041755.01.T01	AT2G47560	44.444	54	30	0	36	89	108	161	8.53e-13	61.6
MsG0780041755.01.T01	AT2G34990	39.474	76	41	2	4	78	89	160	1.17e-12	62.0
MsG0780041755.01.T01	AT2G34990	39.474	76	41	2	4	78	67	138	1.19e-12	62.0
MsG0780041755.01.T01	AT1G49230	36.000	75	43	1	4	78	104	173	1.20e-12	61.2
MsG0780041755.01.T01	AT4G17905	37.333	75	43	1	4	78	153	223	1.21e-12	62.0
MsG0780041755.01.T01	AT2G42360	44.615	65	32	1	27	87	95	159	1.25e-12	61.2
MsG0780041755.01.T01	AT4G17905	37.333	75	43	1	4	78	127	197	1.39e-12	61.6
MsG0780041755.01.T01	AT2G35000	38.667	75	43	1	4	78	106	177	1.52e-12	62.0
MsG0780041755.01.T01	AT1G33480	38.372	86	46	1	1	86	72	150	2.25e-12	60.8
MsG0780041755.01.T01	AT1G72310	53.333	45	21	0	36	80	127	171	2.35e-12	61.2
MsG0780041755.01.T01	AT4G10150	45.763	59	30	1	36	92	111	169	2.85e-12	60.5
MsG0780041755.01.T01	AT4G10160	38.043	92	48	3	2	91	70	154	3.27e-12	60.1
MsG0780041755.01.T01	AT5G66070	35.556	90	46	3	2	79	130	219	3.74e-12	59.7
MsG0780041755.01.T01	AT5G66070	35.556	90	46	3	2	79	130	219	3.74e-12	59.7
MsG0780041755.01.T01	AT3G18773	37.333	75	42	1	4	78	103	172	3.85e-12	59.7
MsG0780041755.01.T01	AT5G10380	42.105	76	38	3	3	78	108	177	4.05e-12	60.5
MsG0780041755.01.T01	AT3G60220	48.214	56	29	0	33	88	114	169	4.50e-12	60.5
MsG0780041755.01.T01	AT5G66070	35.955	89	45	3	2	78	154	242	4.81e-12	59.7
MsG0780041755.01.T01	AT3G62690	40.678	59	35	0	29	87	106	164	5.68e-12	59.7
MsG0780041755.01.T01	AT2G17450	32.099	81	54	1	4	83	69	149	6.13e-12	58.9
MsG0780041755.01.T01	AT3G47990	45.161	62	33	1	31	92	230	290	7.18e-12	60.1
MsG0780041755.01.T01	AT1G53820	46.667	45	24	0	36	80	120	164	7.40e-12	59.7
MsG0780041755.01.T01	AT1G23980	36.000	75	42	1	4	78	118	186	7.88e-12	59.7
MsG0780041755.01.T01	AT1G20823	34.211	76	45	1	4	79	84	154	9.89e-12	58.5
MsG0780041755.01.T01	AT3G47990	45.161	62	33	1	31	92	214	274	1.04e-11	59.3
MsG0780041755.01.T01	AT3G14320	53.488	43	20	0	36	78	88	130	1.26e-11	58.2
MsG0780041755.01.T01	AT5G46650	48.000	50	25	1	36	84	114	163	1.43e-11	58.9
MsG0780041755.01.T01	AT4G30400	48.837	43	22	0	36	78	134	176	1.72e-11	58.9
MsG0780041755.01.T01	AT2G18650	46.667	45	24	0	36	80	126	170	1.73e-11	58.9
MsG0780041755.01.T01	AT1G80400	38.356	73	41	2	14	86	336	404	1.82e-11	58.9
MsG0780041755.01.T01	AT3G47990	45.161	62	33	1	31	92	173	233	1.90e-11	58.5
MsG0780041755.01.T01	AT3G47990	45.161	62	33	1	31	92	173	233	1.90e-11	58.5
MsG0780041755.01.T01	AT3G47990	45.161	62	33	1	31	92	173	233	1.90e-11	58.5
MsG0780041755.01.T01	AT4G15975	47.917	48	25	0	36	83	76	123	2.14e-11	58.2
MsG0780041755.01.T01	AT3G16720	35.526	76	42	2	4	79	94	162	2.35e-11	58.2
MsG0780041755.01.T01	AT4G11360	43.103	58	31	1	30	85	79	136	2.40e-11	56.6
MsG0780041755.01.T01	AT5G37250	35.616	73	44	2	11	81	113	184	2.45e-11	57.4
MsG0780041755.01.T01	AT4G35480	43.396	53	30	0	27	79	104	156	2.47e-11	57.4
MsG0780041755.01.T01	AT5G37250	35.616	73	44	2	11	81	129	200	2.47e-11	57.4
MsG0780041755.01.T01	AT1G74410	44.444	45	25	0	36	80	176	220	4.41e-11	57.0
MsG0780041755.01.T01	AT1G53010	35.714	84	53	1	2	84	95	178	6.48e-11	55.8
MsG0780041755.01.T01	AT4G35840	33.333	75	47	1	4	78	162	233	6.92e-11	56.6
MsG0780041755.01.T01	AT4G11370	41.071	56	31	1	30	83	80	135	8.96e-11	55.1

Find 28 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGAAACAGTGTTTGCATTC+AGG	0.283416	7:+94766770	None:intergenic
GAGGGAGAGTTGCGGCAAAC+TGG	0.288014	7:+94766704	None:intergenic
TAGAGAACCATCAGAGGTTT+AGG	0.308846	7:-94766640	None:intergenic
GAGTCAACAATTGAGTCTTT+TGG	0.329087	7:-94766908	MsG0780041755.01.T01:CDS
CCATCATTGTGTCCCACTCC+TGG	0.429898	7:+94766854	None:intergenic
GTCCCACTCCTGGCAGCCTT+CGG	0.439695	7:+94766864	None:intergenic
ATGCTCATTGCATTGATGAA+TGG	0.451222	7:-94766748	MsG0780041755.01.T01:CDS
GGAGAGAGCCGAAGGCTGCC+AGG	0.468947	7:-94766872	MsG0780041755.01.T01:CDS
AGGGAGAGTTGCGGCAAACT+GGG	0.473534	7:+94766705	None:intergenic
AAGAAGAGAATGAGAAGGGG+AGG	0.485062	7:+94766685	None:intergenic
TATGAAGAAGAGAATGAGAA+GGG	0.489732	7:+94766681	None:intergenic
TACAAGGATGAGGATGGGTC+TGG	0.495233	7:-94766933	None:intergenic
AGCCGAAGGCTGCCAGGAGT+GGG	0.501205	7:-94766866	MsG0780041755.01.T01:CDS
CCTCTCAGAGTACAAAAGTA+AGG	0.505690	7:-94766810	MsG0780041755.01.T01:CDS
GTGGGACACAATGATGGAAC+CGG	0.512250	7:-94766848	MsG0780041755.01.T01:CDS
GAGCCGAAGGCTGCCAGGAG+TGG	0.514338	7:-94766867	MsG0780041755.01.T01:CDS
CCAGGAGTGGGACACAATGA+TGG	0.533449	7:-94766854	MsG0780041755.01.T01:CDS
TACCATTACAAGGATGAGGA+TGG	0.551009	7:-94766939	None:intergenic
TTGTGTTAGGAGAGAGCCGA+AGG	0.554886	7:-94766880	MsG0780041755.01.T01:CDS
ATATGAAGAAGAGAATGAGA+AGG	0.558213	7:+94766680	None:intergenic
TACATATCCTAAACCTCTGA+TGG	0.565677	7:+94766633	None:intergenic
AGAAGAGAATGAGAAGGGGA+GGG	0.576754	7:+94766686	None:intergenic
GAGGCATATTGAGCAACATC+CGG	0.580177	7:+94766829	None:intergenic
ATTCATCAATGCAATGAGCA+TGG	0.597810	7:+94766750	None:intergenic
ACCATTACAAGGATGAGGAT+GGG	0.609830	7:-94766938	None:intergenic
ATGAAGAAGAGAATGAGAAG+GGG	0.612049	7:+94766682	None:intergenic
GAGAAGGGGAGGGAGAGTTG+CGG	0.620573	7:+94766696	None:intergenic
TCAACTTAGAGAACCATCAG+AGG	0.666231	7:-94766646	MsG0780041755.01.T02:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATATGAAGAAGAGAATGAGA+AGG	+	Chr7:94766890-94766909	None:intergenic	30.0%
	TATGAAGAAGAGAATGAGAA+GGG	+	Chr7:94766889-94766908	None:intergenic	30.0%
!	AGTCAACAATTGAGTCTTTT+GGG	-	Chr7:94766660-94766679	MsG0780041755.01.T02:CDS	30.0%
	ATGAAGAAGAGAATGAGAAG+GGG	+	Chr7:94766888-94766907	None:intergenic	35.0%
	ATTCATCAATGCAATGAGCA+TGG	+	Chr7:94766820-94766839	None:intergenic	35.0%
!	ATGCTCATTGCATTGATGAA+TGG	-	Chr7:94766819-94766838	MsG0780041755.01.T01:CDS	35.0%
!	GAGTCAACAATTGAGTCTTT+TGG	-	Chr7:94766659-94766678	MsG0780041755.01.T02:CDS	35.0%
!!	AACAATTGAGTCTTTTGGGA+AGG	-	Chr7:94766664-94766683	MsG0780041755.01.T02:CDS	35.0%
	CCTCTCAGAGTACAAAAGTA+AGG	-	Chr7:94766757-94766776	MsG0780041755.01.T01:CDS	40.0%
	TCAACTTAGAGAACCATCAG+AGG	-	Chr7:94766921-94766940	MsG0780041755.01.T01:CDS	40.0%
	TGGAAACAGTGTTTGCATTC+AGG	+	Chr7:94766800-94766819	None:intergenic	40.0%
!!	CCTTACTTTTGTACTCTGAG+AGG	+	Chr7:94766760-94766779	None:intergenic	40.0%
!!	TCTTTTGGGAAGGTTGTGTT+AGG	-	Chr7:94766674-94766693	MsG0780041755.01.T01:CDS	40.0%
	AAGAAGAGAATGAGAAGGGG+AGG	+	Chr7:94766885-94766904	None:intergenic	45.0%
	AGAAGAGAATGAGAAGGGGA+GGG	+	Chr7:94766884-94766903	None:intergenic	45.0%
	GAGGCATATTGAGCAACATC+CGG	+	Chr7:94766741-94766760	None:intergenic	45.0%
	TTGTGTTAGGAGAGAGCCGA+AGG	-	Chr7:94766687-94766706	MsG0780041755.01.T01:CDS	50.0%
!	GTGGGACACAATGATGGAAC+CGG	-	Chr7:94766719-94766738	MsG0780041755.01.T01:CDS	50.0%
	AGGGAGAGTTGCGGCAAACT+GGG	+	Chr7:94766865-94766884	None:intergenic	55.0%
	CCAGGAGTGGGACACAATGA+TGG	-	Chr7:94766713-94766732	MsG0780041755.01.T01:CDS	55.0%
	CCATCATTGTGTCCCACTCC+TGG	+	Chr7:94766716-94766735	None:intergenic	55.0%
	GAGAAGGGGAGGGAGAGTTG+CGG	+	Chr7:94766874-94766893	None:intergenic	60.0%
	GAGGGAGAGTTGCGGCAAAC+TGG	+	Chr7:94766866-94766885	None:intergenic	60.0%
	AGCCGAAGGCTGCCAGGAGT+GGG	-	Chr7:94766701-94766720	MsG0780041755.01.T01:CDS	65.0%
	GTCCCACTCCTGGCAGCCTT+CGG	+	Chr7:94766706-94766725	None:intergenic	65.0%
	GAGCCGAAGGCTGCCAGGAG+TGG	-	Chr7:94766700-94766719	MsG0780041755.01.T01:CDS	70.0%
	GGAGAGAGCCGAAGGCTGCC+AGG	-	Chr7:94766695-94766714	MsG0780041755.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	94766641	94766948	94766641	ID=MsG0780041755.01;Name=MsG0780041755.01
Chr7	mRNA	94766670	94766948	94766670	ID=MsG0780041755.01.T01;Parent=MsG0780041755.01;Name=MsG0780041755.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|92
Chr7	exon	94766670	94766948	94766670	ID=MsG0780041755.01.T01:exon:23914;Parent=MsG0780041755.01.T01
Chr7	CDS	94766670	94766948	94766670	ID=MsG0780041755.01.T01:cds;Parent=MsG0780041755.01.T01
Chr7	mRNA	94766641	94766751	94766641	ID=MsG0780041755.01.T02;Parent=MsG0780041755.01;Name=MsG0780041755.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|36
Chr7	exon	94766641	94766751	94766641	ID=MsG0780041755.01.T02:exon:23915;Parent=MsG0780041755.01.T02
Chr7	CDS	94766641	94766751	94766641	ID=MsG0780041755.01.T02:cds;Parent=MsG0780041755.01.T02
Chr7	mRNA	94766804	94766860	94766804	ID=MsG0780041755.01.T03;Parent=MsG0780041755.01;Name=MsG0780041755.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|18
Chr7	exon	94766804	94766860	94766804	ID=MsG0780041755.01.T03:exon:23916;Parent=MsG0780041755.01.T03
Chr7	CDS	94766804	94766860	94766804	ID=MsG0780041755.01.T03:cds;Parent=MsG0780041755.01.T03

Gene Sequence

>MsG0780041755.01.T03

ATGATGGAACCGGATGTTGCTCAATATGCCTCTCAGAGTACAAAAGTAAGGACATAA

>MsG0780041755.01.T02

ATGGCTTCGCATGAACGCTACATGCCCAGTTTGCCGCAACTCTCCCTCCCCTTCTCATTCTCTTCTTCATATATCATCATGAATCAACTTAGAGAACCATCAGAGGTTTAG

>MsG0780041755.01.T01

ATGAGGATGGGTCTGGATGAGTCAACAATTGAGTCTTTTGGGAAGGTTGTGTTAGGAGAGAGCCGAAGGCTGCCAGGAGTGGGACACAATGATGGAACCGGATGTTGCTCAATATGCCTCTCAGAGTACAAAAGTAAGGACATAATTAGATGCATTCCTGAATGCAAACACTGTTTCCATGCTCATTGCATTGATGAATGGCTTCGCATGAACGCTACATGCCCAGTTTGCCGCAACTCTCCCTCCCCTTCTCATTCTCTTCTTCATATATCATCATGA

Protein sequence

>MsG0780041755.01.T03

MMEPDVAQYASQSTKVRT*

>MsG0780041755.01.T02

MASHERYMPSLPQLSLPFSFSSSYIIMNQLREPSEV*

>MsG0780041755.01.T01

MRMGLDESTIESFGKVVLGESRRLPGVGHNDGTGCCSICLSEYKSKDIIRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPSPSHSLLHISS*