AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023152.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023152.01.T01 MTR_8g088150 89.722 467 15 3 1 436 1 465 0.0 840
MsG0480023152.01.T01 MTR_8g088150 93.660 347 17 2 1 344 1 345 0.0 661
MsG0480023152.01.T01 MTR_8g088150 93.072 332 18 2 1 329 1 330 0.0 628
MsG0480023152.01.T01 MTR_8g088150 87.218 266 28 3 1 262 1 264 4.04e-164 464
MsG0480023152.01.T01 MTR_1g052135 33.607 366 201 7 88 415 100 461 1.63e-60 205
MsG0480023152.01.T01 MTR_1g073130 36.364 352 182 7 100 413 121 468 1.76e-60 205
MsG0480023152.01.T01 MTR_1g052135 35.463 313 157 6 143 415 19 326 5.18e-56 189
MsG0480023152.01.T01 MTR_1g052135 28.395 243 160 6 88 320 100 338 5.49e-27 111
MsG0480023152.01.T02 MTR_8g088150 89.722 467 15 3 1 436 1 465 0.0 840
MsG0480023152.01.T02 MTR_8g088150 93.660 347 17 2 1 344 1 345 0.0 661
MsG0480023152.01.T02 MTR_8g088150 93.072 332 18 2 1 329 1 330 0.0 628
MsG0480023152.01.T02 MTR_8g088150 87.218 266 28 3 1 262 1 264 4.04e-164 464
MsG0480023152.01.T02 MTR_1g052135 33.607 366 201 7 88 415 100 461 1.63e-60 205
MsG0480023152.01.T02 MTR_1g073130 36.364 352 182 7 100 413 121 468 1.76e-60 205
MsG0480023152.01.T02 MTR_1g052135 35.463 313 157 6 143 415 19 326 5.18e-56 189
MsG0480023152.01.T02 MTR_1g052135 28.395 243 160 6 88 320 100 338 5.49e-27 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023152.01.T01 AT5G46390 60.407 442 125 6 42 435 49 488 0.0 522
MsG0480023152.01.T01 AT5G46390 59.938 322 107 5 42 343 49 368 2.73e-127 375
MsG0480023152.01.T01 AT4G17740 35.795 352 184 7 100 413 123 470 1.24e-58 200
MsG0480023152.01.T01 AT4G17740 35.795 352 184 7 100 413 133 480 1.98e-58 200
MsG0480023152.01.T01 AT3G57680 31.084 415 224 8 42 415 79 472 9.13e-57 196
MsG0480023152.01.T01 AT3G57680 33.750 320 168 6 137 415 7 323 6.81e-52 179
MsG0480023152.01.T01 AT3G57680 33.750 320 168 6 137 415 7 323 6.81e-52 179
MsG0480023152.01.T02 AT5G46390 60.407 442 125 6 42 435 49 488 0.0 522
MsG0480023152.01.T02 AT5G46390 59.938 322 107 5 42 343 49 368 2.73e-127 375
MsG0480023152.01.T02 AT4G17740 35.795 352 184 7 100 413 123 470 1.24e-58 200
MsG0480023152.01.T02 AT4G17740 35.795 352 184 7 100 413 133 480 1.98e-58 200
MsG0480023152.01.T02 AT3G57680 31.084 415 224 8 42 415 79 472 9.13e-57 196
MsG0480023152.01.T02 AT3G57680 33.750 320 168 6 137 415 7 323 6.81e-52 179
MsG0480023152.01.T02 AT3G57680 33.750 320 168 6 137 415 7 323 6.81e-52 179

Find 17 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCAGGAGTTCGTATTTA+AGG 0.185407 4:-81502446 MsG0480023152.01.T01:three_prime_UTR
ACATGACATTGTCAAATTAT+TGG 0.192213 4:-81502251 MsG0480023152.01.T01:three_prime_UTR
TGCGGATTCTTTACCCTTGC+TGG 0.291686 4:+81502560 None:intergenic
TCATGTATTCATATATCAAT+AGG 0.413227 4:+81502268 None:intergenic
TAGTAATACTTAACTAATAT+AGG 0.420478 4:-81502392 MsG0480023152.01.T01:three_prime_UTR
TGCTTCTGGTCTTCCAGCAA+GGG 0.449334 4:-81502573 MsG0480023152.01.T01:three_prime_UTR
AAGTTGCTTCAGTTATGCTC+TGG 0.460865 4:+81502421 None:intergenic
TTGCTTCTGGTCTTCCAGCA+AGG 0.470311 4:-81502574 MsG0480023152.01.T01:three_prime_UTR
ATAGACACATAACACAAGAT+TGG 0.515667 4:-81502492 MsG0480023152.01.T01:three_prime_UTR
AGAGCATAACTGAAGCAACT+TGG 0.524493 4:-81502419 MsG0480023152.01.T01:three_prime_UTR
AGGGTAAAGAATCCGCATGC+TGG 0.531498 4:-81502554 MsG0480023152.01.T01:three_prime_UTR
CAAGGATAAAACAGTTTCTA+CGG 0.535630 4:-81502616 MsG0480023152.01.T01:exon
ACACATAACACAAGATTGGT+AGG 0.581055 4:-81502488 MsG0480023152.01.T01:three_prime_UTR
ATACTTAACTAATATAGGAA+AGG 0.590073 4:-81502387 MsG0480023152.01.T01:three_prime_UTR
AGTAATCTAAGAAAGCATGC+AGG 0.596941 4:-81502461 MsG0480023152.01.T01:three_prime_UTR
ACATGGCAGCTTCCAGCATG+CGG 0.635420 4:+81502542 None:intergenic
AAATGCAGTATGCTTCAGCA+AGG 0.653675 4:-81502634 MsG0480023152.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGAAAAAAATAAAAG+AGG + Chr4:81507073-81507092 None:intergenic 10.0%
!! CCTAAAAAAAAAAAAATTAT+TGG - Chr4:81507169-81507188 MsG0480023152.01.T01:five_prime_UTR 10.0%
!!! CCAATAATTTTTTTTTTTTT+AGG + Chr4:81507172-81507191 None:intergenic 10.0%
!!! TTTATGAATTTTTATTATGT+GGG - Chr4:81502694-81502713 MsG0480023152.01.T01:intron 10.0%
!! AATACAATTATATTAACATC+AGG + Chr4:81503946-81503965 None:intergenic 15.0%
!! ACTGAAAACAAAAAATTATT+AGG + Chr4:81503918-81503937 None:intergenic 15.0%
!! ATAATAGAGTATATTAATTC+TGG - Chr4:81505460-81505479 MsG0480023152.01.T01:intron 15.0%
!! ATACAATTATATTAACATCA+GGG + Chr4:81503945-81503964 None:intergenic 15.0%
!! CATAATAAAAATTCATAAAC+TGG + Chr4:81502693-81502712 None:intergenic 15.0%
!! CTGAAAACAAAAAATTATTA+GGG + Chr4:81503917-81503936 None:intergenic 15.0%
!! TAATAGAGTATATTAATTCT+GGG - Chr4:81505461-81505480 MsG0480023152.01.T01:intron 15.0%
!! TAGTAATACTTAACTAATAT+AGG - Chr4:81506997-81507016 MsG0480023152.01.T01:CDS 15.0%
!!! AAATTTTTGAGATATATACA+TGG + Chr4:81506867-81506886 None:intergenic 15.0%
!!! ACTATATGTTTTAACATTTT+CGG - Chr4:81503978-81503997 MsG0480023152.01.T01:intron 15.0%
!!! GTTTATGAATTTTTATTATG+TGG - Chr4:81502693-81502712 MsG0480023152.01.T01:intron 15.0%
!! ACGACAATAATTTGAAAAAA+TGG - Chr4:81506541-81506560 MsG0480023152.01.T01:intron 20.0%
!! ATACTTAACTAATATAGGAA+AGG - Chr4:81507002-81507021 MsG0480023152.01.T01:CDS 20.0%
!! ATGAAAAAAATAAAAGAGGA+AGG + Chr4:81507069-81507088 None:intergenic 20.0%
!! ATTGAAGACAATAAAATTCA+AGG + Chr4:81505295-81505314 None:intergenic 20.0%
!! CACTTTATAATTCATATTGA+AGG - Chr4:81502821-81502840 MsG0480023152.01.T01:intron 20.0%
!! CTACATAAAAATGTAAAACA+AGG + Chr4:81507031-81507050 None:intergenic 20.0%
!! TAAAAAAACACAATTATACC+TGG + Chr4:81506409-81506428 None:intergenic 20.0%
!! TACATTGTGTAAAACATTAT+TGG - Chr4:81505176-81505195 MsG0480023152.01.T01:intron 20.0%
!! TATTTATGTTAGACATTTAC+TGG - Chr4:81505381-81505400 MsG0480023152.01.T01:intron 20.0%
!! TCATGTATTCATATATCAAT+AGG + Chr4:81507124-81507143 None:intergenic 20.0%
!! TGATATATTCGATTAAATGT+TGG - Chr4:81505547-81505566 MsG0480023152.01.T01:intron 20.0%
!! TGTAAAAAAAATTCAGATGT+AGG + Chr4:81505804-81505823 None:intergenic 20.0%
!! TTAACGTTCATGTTTAATAT+TGG - Chr4:81504264-81504283 MsG0480023152.01.T01:intron 20.0%
!! TTCGTTATATGAAAAAGAAA+AGG + Chr4:81504830-81504849 None:intergenic 20.0%
!!! AAAAATGCAAAATTTTGATG+TGG + Chr4:81502652-81502671 None:intergenic 20.0%
!!! AAAATGCAAAATTTTGATGT+GGG + Chr4:81502651-81502670 None:intergenic 20.0%
!!! AATTTTTATTATGTGGGTTT+TGG - Chr4:81502700-81502719 MsG0480023152.01.T01:intron 20.0%
!!! GTTGATTTCTTTTTTACTAT+AGG - Chr4:81505569-81505588 MsG0480023152.01.T01:CDS 20.0%
!!! TGATTGATTATTTTCTTTCA+GGG - Chr4:81506259-81506278 MsG0480023152.01.T01:CDS 20.0%
!!! TTTTATTTGTTTCTTGGTTA+GGG - Chr4:81504079-81504098 MsG0480023152.01.T01:intron 20.0%
! AAAAAAATTCATCTGCATTG+CGG - Chr4:81503339-81503358 MsG0480023152.01.T01:intron 25.0%
! AAAATGAAGATAAACGCATA+AGG - Chr4:81504716-81504735 MsG0480023152.01.T01:intron 25.0%
! AAGATCCAATACAAAATATG+AGG + Chr4:81504574-81504593 None:intergenic 25.0%
! ACATGACATTGTCAAATTAT+TGG - Chr4:81507138-81507157 MsG0480023152.01.T01:CDS 25.0%
! AGAAAAGGAAAAAGAAAAGA+TGG + Chr4:81504815-81504834 None:intergenic 25.0%
! ATTAGATGTTTATGCCTTAT+GGG - Chr4:81503242-81503261 MsG0480023152.01.T01:CDS 25.0%
! CACTATTGAAAATTGAAGAA+TGG + Chr4:81503194-81503213 None:intergenic 25.0%
! CATTCAAATAAGAAAAAGAG+AGG + Chr4:81505874-81505893 None:intergenic 25.0%
! CATTTCTCCACTAATAATAT+TGG - Chr4:81505329-81505348 MsG0480023152.01.T01:intron 25.0%
! CGTTAAAAAACTAAAAGCAA+AGG + Chr4:81504250-81504269 None:intergenic 25.0%
! GAAAAGGAAAAAGAAAAGAT+GGG + Chr4:81504814-81504833 None:intergenic 25.0%
! GTTCATGTTATACTTATTTC+AGG - Chr4:81506111-81506130 MsG0480023152.01.T01:intron 25.0%
! GTTTCTTACTTAATGGTATA+TGG - Chr4:81503673-81503692 MsG0480023152.01.T01:intron 25.0%
! TAGATGTCTCATGATAATAT+AGG + Chr4:81503524-81503543 None:intergenic 25.0%
! TTCACAGTCAAATTGTAATA+TGG - Chr4:81506670-81506689 MsG0480023152.01.T01:intron 25.0%
!! AATTGAAGAAATACTGACTA+TGG + Chr4:81504907-81504926 None:intergenic 25.0%
!! CTGATTGATTATTTTCTTTC+AGG - Chr4:81506258-81506277 MsG0480023152.01.T01:CDS 25.0%
!! TTTATTTGTTTCTTGGTTAG+GGG - Chr4:81504080-81504099 MsG0480023152.01.T01:intron 25.0%
!! TTTTCCTTAAAATGTGATGT+TGG - Chr4:81505250-81505269 MsG0480023152.01.T01:CDS 25.0%
!!! ACTTTAAGTTGGTAAAGTAA+TGG + Chr4:81502746-81502765 None:intergenic 25.0%
!!! CTTTAAGTTGGTAAAGTAAT+GGG + Chr4:81502745-81502764 None:intergenic 25.0%
!!! CTTTTATTTGTTTCTTGGTT+AGG - Chr4:81504078-81504097 MsG0480023152.01.T01:intron 25.0%
!!! TCTTGCTTTTATTTGTTTCT+TGG - Chr4:81504073-81504092 MsG0480023152.01.T01:intron 25.0%
!!! TCTTTGTTTTTGCTTTCTTA+CGG - Chr4:81504493-81504512 MsG0480023152.01.T01:intron 25.0%
!!! TGTTTTAACATTTTCGGTAT+AGG - Chr4:81503984-81504003 MsG0480023152.01.T01:intron 25.0%
AAAGAAAGAAGATGAATGTG+TGG - Chr4:81502243-81502262 MsG0480023152.01.T02:three_prime_UTR 30.0%
AACACTGTCATATACAACTA+AGG - Chr4:81503309-81503328 MsG0480023152.01.T01:intron 30.0%
AAGCTTTGCAATTTCAATTC+CGG + Chr4:81505086-81505105 None:intergenic 30.0%
AATAAACCTTAGGGAAGTTA+CGG - Chr4:81503755-81503774 MsG0480023152.01.T01:intron 30.0%
AATAATCAATCAGTACAGCT+TGG + Chr4:81506251-81506270 None:intergenic 30.0%
AATGATGACTTTCTTGATAC+TGG - Chr4:81502578-81502597 MsG0480023152.01.T01:three_prime_UTR 30.0%
ATAGACACATAACACAAGAT+TGG - Chr4:81506897-81506916 MsG0480023152.01.T01:CDS 30.0%
ATCTTAGAGATAATCTTGGT+GGG - Chr4:81504589-81504608 MsG0480023152.01.T01:intron 30.0%
ATGTGATTATGTCTATGTGT+CGG - Chr4:81502919-81502938 MsG0480023152.01.T01:intron 30.0%
ATTCTGATTCCAAGTTAGTT+TGG - Chr4:81504212-81504231 MsG0480023152.01.T01:intron 30.0%
CAAGGATAAAACAGTTTCTA+CGG - Chr4:81506773-81506792 MsG0480023152.01.T01:intron 30.0%
CATGAGACCAATATTATTAG+TGG + Chr4:81505339-81505358 None:intergenic 30.0%
CATTAGATGTTTATGCCTTA+TGG - Chr4:81503241-81503260 MsG0480023152.01.T01:CDS 30.0%
GAATATATCATCATCCTAAC+TGG + Chr4:81505537-81505556 None:intergenic 30.0%
GCAAAACAAGCAATAGTAAA+TGG + Chr4:81503591-81503610 None:intergenic 30.0%
GTATTGGGATTAATATTGGA+CGG - Chr4:81503804-81503823 MsG0480023152.01.T01:intron 30.0%
GTTAAAATTGACTGCTATCT+TGG - Chr4:81505602-81505621 MsG0480023152.01.T01:CDS 30.0%
GTTAATAACACAGAGGTAAA+TGG - Chr4:81504118-81504137 MsG0480023152.01.T01:intron 30.0%
GTTACATTCAATACAACACA+TGG + Chr4:81505003-81505022 None:intergenic 30.0%
GTTTCTAATGTCATCATGAT+AGG - Chr4:81505683-81505702 MsG0480023152.01.T01:intron 30.0%
TAAAGCAGCAAACTTTAAGT+TGG + Chr4:81502757-81502776 None:intergenic 30.0%
TAAGAAAAAGAGAGGAGATT+AGG + Chr4:81505866-81505885 None:intergenic 30.0%
TGGGAAAACAAAAACAATCT+TGG + Chr4:81504795-81504814 None:intergenic 30.0%
TGTGTAAAACATTATTGGAG+AGG - Chr4:81505181-81505200 MsG0480023152.01.T01:intron 30.0%
TGTTTAGTAGATAACCAGTT+AGG - Chr4:81505520-81505539 MsG0480023152.01.T01:intron 30.0%
TTCAAAGCAGAAACTAAGAA+TGG + Chr4:81504654-81504673 None:intergenic 30.0%
TTCTCGTGTTTCTTACTTAA+TGG - Chr4:81503666-81503685 MsG0480023152.01.T01:intron 30.0%
TTGAATCAATTGAAGTTCAG+CGG - Chr4:81504327-81504346 MsG0480023152.01.T01:intron 30.0%
TTGGATCTTAGAGATAATCT+TGG - Chr4:81504585-81504604 MsG0480023152.01.T01:intron 30.0%
! ATGAAGATGATGATGATGAT+GGG + Chr4:81502315-81502334 None:intergenic 30.0%
! GGAAAAACTTTTACAACAAG+AGG + Chr4:81505783-81505802 None:intergenic 30.0%
! GTTTTACACAATGTATGCTT+TGG + Chr4:81505171-81505190 None:intergenic 30.0%
! TGAACTTCAATTGATTCAAC+AGG + Chr4:81504326-81504345 None:intergenic 30.0%
! TGGTATTGGAATAAACCTTA+GGG - Chr4:81503746-81503765 MsG0480023152.01.T01:intron 30.0%
! TTATTTGTTTCTTGGTTAGG+GGG - Chr4:81504081-81504100 MsG0480023152.01.T01:intron 30.0%
!! CTTTTAAAAGTTCTCCAAGA+TGG - Chr4:81503707-81503726 MsG0480023152.01.T01:intron 30.0%
!! GAAGATTTTTGAAAATGAGC+AGG + Chr4:81504044-81504063 None:intergenic 30.0%
!! GAAGGTATTGGGATTAATAT+TGG - Chr4:81503800-81503819 MsG0480023152.01.T01:intron 30.0%
!! TACTGCATTTTGAAAGATGT+TGG + Chr4:81506745-81506764 None:intergenic 30.0%
!!! CTGTTGTTTTCAATGGATTT+TGG - Chr4:81505639-81505658 MsG0480023152.01.T01:CDS 30.0%
!!! TCATTGATGTTGTTTTTGTG+TGG - Chr4:81503006-81503025 MsG0480023152.01.T01:CDS 30.0%
!!! TCTTCAACTGTTGTTTTCAA+TGG - Chr4:81505632-81505651 MsG0480023152.01.T01:CDS 30.0%
!!! TTTGCCCTTTTAATTTTTGC+AGG - Chr4:81505060-81505079 MsG0480023152.01.T01:CDS 30.0%
AAGAATGGTATAGGTAGACA+GGG + Chr4:81504639-81504658 None:intergenic 35.0%
AAGAGAGGAGATTAGGAAAT+CGG + Chr4:81505859-81505878 None:intergenic 35.0%
ACAAATGCTCAAAGTGAATG+TGG - Chr4:81504862-81504881 MsG0480023152.01.T01:intron 35.0%
ACACATAACACAAGATTGGT+AGG - Chr4:81506901-81506920 MsG0480023152.01.T01:CDS 35.0%
AGGGCAAACAAAACTGAATT+AGG + Chr4:81505048-81505067 None:intergenic 35.0%
ATCTTCACTCTGTACAGAAA+AGG + Chr4:81505434-81505453 None:intergenic 35.0%
ATGTAATCGAGTGTCAATGT+CGG - Chr4:81506574-81506593 MsG0480023152.01.T01:intron 35.0%
ATTGGCAGTTAATAACACAG+AGG - Chr4:81504111-81504130 MsG0480023152.01.T01:intron 35.0%
CAATTATACCTGGAAGTTTC+TGG + Chr4:81506399-81506418 None:intergenic 35.0%
CTGTATTTGAGCTTCAAGAT+GGG - Chr4:81506293-81506312 MsG0480023152.01.T01:CDS 35.0%
CTTGAAGCTCAAATACAGAT+TGG + Chr4:81506291-81506310 None:intergenic 35.0%
GAAAGCTTAGTGGGAATAAT+TGG + Chr4:81502341-81502360 None:intergenic 35.0%
GATCTTAGAGATAATCTTGG+TGG - Chr4:81504588-81504607 MsG0480023152.01.T01:intron 35.0%
GCAGAAACTAAGAATGGTAT+AGG + Chr4:81504648-81504667 None:intergenic 35.0%
GCTCGAAAAGATTTAGTCAT+CGG - Chr4:81504449-81504468 MsG0480023152.01.T01:intron 35.0%
GGTGAAAGAAAACGTGTATA+AGG + Chr4:81503159-81503178 None:intergenic 35.0%
GTGTGAGCTAATCGATAAAA+TGG - Chr4:81505483-81505502 MsG0480023152.01.T01:intron 35.0%
TAAGAATGGTATAGGTAGAC+AGG + Chr4:81504640-81504659 None:intergenic 35.0%
TACAGTATGTCGTTGTTTAG+TGG - Chr4:81505932-81505951 MsG0480023152.01.T01:intron 35.0%
TATTGCTAGCTAAGTAGCTT+AGG - Chr4:81502782-81502801 MsG0480023152.01.T01:intron 35.0%
TCCTTAAAATGTGATGTTGG+AGG - Chr4:81505253-81505272 MsG0480023152.01.T01:CDS 35.0%
TCTGTATTTGAGCTTCAAGA+TGG - Chr4:81506292-81506311 MsG0480023152.01.T01:CDS 35.0%
TCTTCACTCTGTACAGAAAA+GGG + Chr4:81505433-81505452 None:intergenic 35.0%
! ACCTCCAACATCACATTTTA+AGG + Chr4:81505257-81505276 None:intergenic 35.0%
! AGTAATCTAAGAAAGCATGC+AGG - Chr4:81506928-81506947 MsG0480023152.01.T01:CDS 35.0%
! CAAATGCAATCTTTTGCTTC+TGG - Chr4:81506802-81506821 MsG0480023152.01.T01:CDS 35.0%
! CACTTTCAGTTTGTTCCATA+CGG + Chr4:81504382-81504401 None:intergenic 35.0%
! CCAATTTACGCCATGTTTTA+GGG + Chr4:81503454-81503473 None:intergenic 35.0%
! CTGGTATTGGAATAAACCTT+AGG - Chr4:81503745-81503764 MsG0480023152.01.T01:intron 35.0%
! CTTTTTGATCTGTATCATGC+AGG - Chr4:81505986-81506005 MsG0480023152.01.T01:intron 35.0%
! GATGAAGATGATGATGATGA+TGG + Chr4:81502316-81502335 None:intergenic 35.0%
! TGAAGATGATGATGATGATG+GGG + Chr4:81502314-81502333 None:intergenic 35.0%
!! ATCTGTGACTATTCAGGTTT+TGG - Chr4:81504189-81504208 MsG0480023152.01.T01:intron 35.0%
!! CAATTTACGCCATGTTTTAG+GGG + Chr4:81503453-81503472 None:intergenic 35.0%
!! TGTTGAAAGTATTGTTGGAG+TGG + Chr4:81502291-81502310 None:intergenic 35.0%
!! TTTTCAATAGTGTTGCTCTG+TGG - Chr4:81503202-81503221 MsG0480023152.01.T01:intron 35.0%
!!! TTGATGTTGTTTTTGTGTGG+TGG - Chr4:81503009-81503028 MsG0480023152.01.T01:CDS 35.0%
AAATGCAGTATGCTTCAGCA+AGG - Chr4:81506755-81506774 MsG0480023152.01.T01:intron 40.0%
AAGACATTAGCCGAGTGAAT+TGG + Chr4:81503877-81503896 None:intergenic 40.0%
AAGTTGCTTCAGTTATGCTC+TGG + Chr4:81506971-81506990 None:intergenic 40.0%
AATATCAAGAATCGCGATCG+GGG + Chr4:81503283-81503302 None:intergenic 40.0%
AATGAAGCGACTTCAAGACA+TGG - Chr4:81504545-81504564 MsG0480023152.01.T01:intron 40.0%
AATTTCCAACTCAGACGACA+CGG + Chr4:81503495-81503514 None:intergenic 40.0%
AGAGAGGAGATTAGGAAATC+GGG + Chr4:81505858-81505877 None:intergenic 40.0%
AGAGCATAACTGAAGCAACT+TGG - Chr4:81506970-81506989 MsG0480023152.01.T01:CDS 40.0%
AGGGAAGTTACGGATGAAAA+TGG - Chr4:81503765-81503784 MsG0480023152.01.T01:intron 40.0%
AGGTATGACATGACTGGTAT+TGG - Chr4:81503732-81503751 MsG0480023152.01.T01:intron 40.0%
AGTTGTGCTCAAACATGCTT+TGG - Chr4:81504957-81504976 MsG0480023152.01.T01:CDS 40.0%
ATAGTCACAGATGTTCCGTT+AGG + Chr4:81504181-81504200 None:intergenic 40.0%
ATGAAGCGACTTCAAGACAT+GGG - Chr4:81504546-81504565 MsG0480023152.01.T01:intron 40.0%
ATGTGTGTTCGTGCAGATTA+TGG - Chr4:81504756-81504775 MsG0480023152.01.T01:intron 40.0%
CAATATCAAGAATCGCGATC+GGG + Chr4:81503284-81503303 None:intergenic 40.0%
CACAAGGACATAAATGGCAA+CGG - Chr4:81506358-81506377 MsG0480023152.01.T01:intron 40.0%
CATGCAGGAGTTCGTATTTA+AGG - Chr4:81506943-81506962 MsG0480023152.01.T01:CDS 40.0%
CCAAAGCACAAGGACATAAA+TGG - Chr4:81506352-81506371 MsG0480023152.01.T01:intron 40.0%
CCAATGCATTGAACTCTTTG+AGG + Chr4:81504430-81504449 None:intergenic 40.0%
CCATTTATGTCCTTGTGCTT+TGG + Chr4:81506355-81506374 None:intergenic 40.0%
CCCTAAAACATGGCGTAAAT+TGG - Chr4:81503451-81503470 MsG0480023152.01.T01:intron 40.0%
CCGGCCTGCAAAAATTAAAA+GGG + Chr4:81505067-81505086 None:intergenic 40.0%
CCTCAAAGAGTTCAATGCAT+TGG - Chr4:81504427-81504446 MsG0480023152.01.T01:intron 40.0%
CGAGTAAATGTCAGAGACTT+AGG + Chr4:81502851-81502870 None:intergenic 40.0%
CGTATGGAACAAACTGAAAG+TGG - Chr4:81504380-81504399 MsG0480023152.01.T01:intron 40.0%
CTGGTGTGGTTATAACTGTT+GGG - Chr4:81506317-81506336 MsG0480023152.01.T01:CDS 40.0%
CTTCACTCTGTACAGAAAAG+GGG + Chr4:81505432-81505451 None:intergenic 40.0%
CTTTCTTTCTCTCCTTGTCT+CGG - Chr4:81506435-81506454 MsG0480023152.01.T01:intron 40.0%
GACAACTCTACCAATTCACT+CGG - Chr4:81503864-81503883 MsG0480023152.01.T01:intron 40.0%
GCAATATCAAGAATCGCGAT+CGG + Chr4:81503285-81503304 None:intergenic 40.0%
GTATGTAACACCAAAGCACA+AGG - Chr4:81506342-81506361 MsG0480023152.01.T01:intron 40.0%
TAGTCACAGATGTTCCGTTA+GGG + Chr4:81504180-81504199 None:intergenic 40.0%
TATCTCGAAGCTCAACATCA+CGG + Chr4:81502490-81502509 None:intergenic 40.0%
TCCGGCCTGCAAAAATTAAA+AGG + Chr4:81505068-81505087 None:intergenic 40.0%
TCTGGTGTGGTTATAACTGT+TGG - Chr4:81506316-81506335 MsG0480023152.01.T01:CDS 40.0%
TGAGCAATTCCATTCAGACA+AGG - Chr4:81503085-81503104 MsG0480023152.01.T01:CDS 40.0%
TGGTTAGGGGGATGAAATAT+TGG - Chr4:81504093-81504112 MsG0480023152.01.T01:intron 40.0%
TTCACTCTGTACAGAAAAGG+GGG + Chr4:81505431-81505450 None:intergenic 40.0%
TTCCATTCAGACAAGGTCAA+AGG - Chr4:81503092-81503111 MsG0480023152.01.T01:CDS 40.0%
TTCCTGAACAAGTCCTTCAT+TGG + Chr4:81502543-81502562 None:intergenic 40.0%
TTGATCTAATACTGCAGCTG+CGG - Chr4:81503389-81503408 MsG0480023152.01.T01:intron 40.0%
TTGTGAAGGGAAAGCTTAGT+GGG + Chr4:81502350-81502369 None:intergenic 40.0%
TTTCATCCGTAACTTCCCTA+AGG + Chr4:81503764-81503783 None:intergenic 40.0%
TTTCCTAAACGAAGGAGACA+CGG - Chr4:81505105-81505124 MsG0480023152.01.T01:intron 40.0%
TTTCTTTCTCTCCTTGTCTC+GGG - Chr4:81506436-81506455 MsG0480023152.01.T01:intron 40.0%
! AAGAAACACGAGAAGCACAA+TGG + Chr4:81503660-81503679 None:intergenic 40.0%
! ATGCATTGAACTCTTTGAGG+CGG + Chr4:81504427-81504446 None:intergenic 40.0%
! CTTTTACAACAAGAGGAGCA+CGG + Chr4:81505776-81505795 None:intergenic 40.0%
! GCAAAGCTTTTCCTAAACGA+AGG - Chr4:81505097-81505116 MsG0480023152.01.T01:intron 40.0%
! GCCAATTTACGCCATGTTTT+AGG + Chr4:81503455-81503474 None:intergenic 40.0%
! GGGTGCCTCATATTTTGTAT+TGG - Chr4:81504566-81504585 MsG0480023152.01.T01:intron 40.0%
! GTTTTTGTGTGGTGGTTAGT+TGG - Chr4:81503017-81503036 MsG0480023152.01.T01:CDS 40.0%
! TACACGTTTTCTTTCACCTG+AGG - Chr4:81503161-81503180 MsG0480023152.01.T01:intron 40.0%
! TACCAATGAAGGACTTGTTC+AGG - Chr4:81502538-81502557 MsG0480023152.01.T01:three_prime_UTR 40.0%
! TTATGTCTATGTGTCGGTGT+TGG - Chr4:81502925-81502944 MsG0480023152.01.T01:intron 40.0%
!! AAAGTGGTGCTGCTCATATT+GGG - Chr4:81504396-81504415 MsG0480023152.01.T01:intron 40.0%
!! TGAAAGTATTGTTGGAGTGG+TGG + Chr4:81502288-81502307 None:intergenic 40.0%
!! TGGGGTGTTGAAAGTATTGT+TGG + Chr4:81502296-81502315 None:intergenic 40.0%
!! TTTGGTGTTTGTGTCTGTGT+CGG - Chr4:81502955-81502974 MsG0480023152.01.T01:intron 40.0%
!! TTTGGTTTGTAGCTTGGAGT+TGG - Chr4:81502718-81502737 MsG0480023152.01.T01:intron 40.0%
!!! CCCTTTTAATTTTTGCAGGC+CGG - Chr4:81505064-81505083 MsG0480023152.01.T01:CDS 40.0%
AAAAGTTCTCCAAGATGGCG+AGG - Chr4:81503712-81503731 MsG0480023152.01.T01:intron 45.0%
AAATGGAGACCATAGGCTGA+AGG - Chr4:81503782-81503801 MsG0480023152.01.T01:intron 45.0%
AAGCGAATGCTGACCAGTTT+GGG - Chr4:81503129-81503148 MsG0480023152.01.T01:intron 45.0%
AATTGTCGAGCTGTTCTCGT+TGG - Chr4:81506154-81506173 MsG0480023152.01.T01:intron 45.0%
ACAATCTAGTGCTAGTCCCA+TGG + Chr4:81506481-81506500 None:intergenic 45.0%
AGCTCAAGCATGGAAACTGT+GGG - Chr4:81504300-81504319 MsG0480023152.01.T01:CDS 45.0%
ATCCCAATACCTTCAGCCTA+TGG + Chr4:81503794-81503813 None:intergenic 45.0%
CATCCCAAGCTGCAAATACA+GGG + Chr4:81506715-81506734 None:intergenic 45.0%
CCAGTGCTAGTGAAATAGTG+AGG - Chr4:81506030-81506049 MsG0480023152.01.T01:intron 45.0%
CCTCACTATTTCACTAGCAC+TGG + Chr4:81506033-81506052 None:intergenic 45.0%
CCTGAGGTTGTTACCAATGA+AGG - Chr4:81502527-81502546 MsG0480023152.01.T01:three_prime_UTR 45.0%
CGGAACATCTGTGACTATTC+AGG - Chr4:81504183-81504202 MsG0480023152.01.T01:intron 45.0%
CGGATGAAAATGGAGACCAT+AGG - Chr4:81503775-81503794 MsG0480023152.01.T01:intron 45.0%
CTAAAAGCAAAGGCTAGAGC+AGG + Chr4:81504240-81504259 None:intergenic 45.0%
CTCAACATCACGGCATGTTT+CGG + Chr4:81502480-81502499 None:intergenic 45.0%
CTTGCAACTACACTCTCCTT+TGG - Chr4:81502377-81502396 MsG0480023152.01.T01:three_prime_UTR 45.0%
GAAGAGCAGATGCAGAAGAA+GGG + Chr4:81502421-81502440 None:intergenic 45.0%
GTTGTGAAGGGAAAGCTTAG+TGG + Chr4:81502351-81502370 None:intergenic 45.0%
TATCCGAAACAACAGCTTGC+TGG + Chr4:81505740-81505759 None:intergenic 45.0%
TCATCCCAAGCTGCAAATAC+AGG + Chr4:81506716-81506735 None:intergenic 45.0%
TGAAGAGCAGATGCAGAAGA+AGG + Chr4:81502422-81502441 None:intergenic 45.0%
TGAAGTTCAGCGGCAATTTG+TGG - Chr4:81504337-81504356 MsG0480023152.01.T01:intron 45.0%
TGATAGGTCATCTACACTGC+TGG - Chr4:81505699-81505718 MsG0480023152.01.T01:intron 45.0%
TGCCTTTGACCTTGTCTGAA+TGG + Chr4:81503097-81503116 None:intergenic 45.0%
TGTATAAGGATCGCCCAAAC+TGG + Chr4:81503145-81503164 None:intergenic 45.0%
TGTTCCATACGGTAAGAGAC+TGG + Chr4:81504371-81504390 None:intergenic 45.0%
TTACCGTGTCTCCTTCGTTT+AGG + Chr4:81505111-81505130 None:intergenic 45.0%
TTCTTTCTCTCCTTGTCTCG+GGG - Chr4:81506437-81506456 MsG0480023152.01.T01:intron 45.0%
TTTCGGAGGAAGTAGAGAGA+GGG + Chr4:81502463-81502482 None:intergenic 45.0%
TTTGAGCTTCAAGATGGGTC+TGG - Chr4:81506298-81506317 MsG0480023152.01.T01:CDS 45.0%
! AAGGACTTGTTCAGGAAGCT+TGG - Chr4:81502546-81502565 MsG0480023152.01.T01:three_prime_UTR 45.0%
! ACGTTTTCTTTCACCTGAGG+AGG - Chr4:81503164-81503183 MsG0480023152.01.T01:intron 45.0%
! AGACCATAGGCTGAAGGTAT+TGG - Chr4:81503788-81503807 MsG0480023152.01.T01:intron 45.0%
! AGCATTGGAGTTGCTACCAT+GGG - Chr4:81506462-81506481 MsG0480023152.01.T01:intron 45.0%
! CAAAGGAGAGTGTAGTTGCA+AGG + Chr4:81502379-81502398 None:intergenic 45.0%
! CCTTCATTGGTAACAACCTC+AGG + Chr4:81502530-81502549 None:intergenic 45.0%
! GAACATTGATGATACCTGCC+AGG + Chr4:81502627-81502646 None:intergenic 45.0%
! GAAGTATCATCCCTGTTGCA+AGG - Chr4:81504154-81504173 MsG0480023152.01.T01:intron 45.0%
! GTGTCGTCTGAGTTGGAAAT+TGG - Chr4:81503494-81503513 MsG0480023152.01.T01:intron 45.0%
! GTTCCAGCAAGCTGTTGTTT+CGG - Chr4:81505734-81505753 MsG0480023152.01.T01:intron 45.0%
! TCAATAGTGTTGCTCTGTGG+AGG - Chr4:81503205-81503224 MsG0480023152.01.T01:intron 45.0%
! TTTTACCGTGTCGTCTGAGT+TGG - Chr4:81503487-81503506 MsG0480023152.01.T01:intron 45.0%
!! AAACAACAGCTTGCTGGAAC+TGG + Chr4:81505734-81505753 None:intergenic 45.0%
!! AACAACAGCTTGCTGGAACT+GGG + Chr4:81505733-81505752 None:intergenic 45.0%
!! AAGCATTGGAGTTGCTACCA+TGG - Chr4:81506461-81506480 MsG0480023152.01.T01:intron 45.0%
!! GAAAGTGGTGCTGCTCATAT+TGG - Chr4:81504395-81504414 MsG0480023152.01.T01:intron 45.0%
!! GAAGAATGGATTACCTCCTC+AGG + Chr4:81503180-81503199 None:intergenic 45.0%
!! GACCATAGGCTGAAGGTATT+GGG - Chr4:81503789-81503808 MsG0480023152.01.T01:intron 45.0%
!! TGGTGGTTAGTTGGTGCTAA+TGG - Chr4:81503026-81503045 MsG0480023152.01.T01:CDS 45.0%
!!! GTGGGTTTTGGTTTGTAGCT+TGG - Chr4:81502712-81502731 MsG0480023152.01.T01:intron 45.0%
AACATCACGGCATGTTTCGG+AGG + Chr4:81502477-81502496 None:intergenic 50.0%
ACTCTGTACAGAAAAGGGGG+AGG + Chr4:81505428-81505447 None:intergenic 50.0%
AGATGCAGAAGAAGGGAAGG+GGG + Chr4:81502414-81502433 None:intergenic 50.0%
AGCAGATGCAGAAGAAGGGA+AGG + Chr4:81502417-81502436 None:intergenic 50.0%
AGGGTAAAGAATCCGCATGC+TGG - Chr4:81506835-81506854 MsG0480023152.01.T01:CDS 50.0%
ATGGCGAGGTATGACATGAC+TGG - Chr4:81503726-81503745 MsG0480023152.01.T01:intron 50.0%
CAAGCGAATGCTGACCAGTT+TGG - Chr4:81503128-81503147 MsG0480023152.01.T01:intron 50.0%
CACACCAGTCTCTTACCGTA+TGG - Chr4:81504364-81504383 MsG0480023152.01.T01:intron 50.0%
CAGATGCAGAAGAAGGGAAG+GGG + Chr4:81502415-81502434 None:intergenic 50.0%
CAGCTCAAGCATGGAAACTG+TGG - Chr4:81504299-81504318 MsG0480023152.01.T01:CDS 50.0%
CATGTCATACCTCGCCATCT+TGG + Chr4:81503724-81503743 None:intergenic 50.0%
CCAAGCTGCAAATACAGGGA+GGG + Chr4:81506711-81506730 None:intergenic 50.0%
CCTCCCTGTATTTGCAGCTT+GGG - Chr4:81506709-81506728 MsG0480023152.01.T01:intron 50.0%
CCTGACTTCCAGAAACTTCC+AGG - Chr4:81506388-81506407 MsG0480023152.01.T01:intron 50.0%
CGTTGTTGTCAGCTCAAGCA+TGG - Chr4:81504290-81504309 MsG0480023152.01.T01:CDS 50.0%
CTCGTTGGAAAACGCACGTA+TGG - Chr4:81506169-81506188 MsG0480023152.01.T01:intron 50.0%
CTGTCTGTGCCCCTAAAACA+TGG - Chr4:81503441-81503460 MsG0480023152.01.T01:intron 50.0%
GAGCAGGTGCCAAACTAACT+TGG + Chr4:81504224-81504243 None:intergenic 50.0%
GAGGAAGTAGAGAGAGGGAT+TGG + Chr4:81502458-81502477 None:intergenic 50.0%
GCAGATGCAGAAGAAGGGAA+GGG + Chr4:81502416-81502435 None:intergenic 50.0%
GGGGGAGAAGAATAAGCCAA+AGG + Chr4:81502396-81502415 None:intergenic 50.0%
GTAACAACCTCAGGAGCAGT+TGG + Chr4:81502521-81502540 None:intergenic 50.0%
GTAGAGAGAGGGATTGGAAG+AGG + Chr4:81502452-81502471 None:intergenic 50.0%
GTTTCGGAGGAAGTAGAGAG+AGG + Chr4:81502464-81502483 None:intergenic 50.0%
TCGTGCAGATTATGGCTGAG+AGG - Chr4:81504764-81504783 MsG0480023152.01.T01:intron 50.0%
TGCGGATTCTTTACCCTTGC+TGG + Chr4:81506832-81506851 None:intergenic 50.0%
TGGAAAACGCACGTATGGCA+AGG - Chr4:81506174-81506193 MsG0480023152.01.T01:intron 50.0%
TTGATACTGGTCGCAACCGT+TGG - Chr4:81502591-81502610 MsG0480023152.01.T01:three_prime_UTR 50.0%
! ACAAGAGGAGCACGGATCAA+TGG + Chr4:81505768-81505787 None:intergenic 50.0%
! AGGAGAGTGTAGTTGCAAGG+AGG + Chr4:81502376-81502395 None:intergenic 50.0%
! CCTGGAAGTTTCTGGAAGTC+AGG + Chr4:81506391-81506410 None:intergenic 50.0%
! CTGTGTCGGTGCTTCTTCAT+AGG - Chr4:81502969-81502988 MsG0480023152.01.T01:intron 50.0%
! GGAGAGTGTAGTTGCAAGGA+GGG + Chr4:81502375-81502394 None:intergenic 50.0%
! TCATTCTGCTGGTGTCAGAC+AGG - Chr4:81503833-81503852 MsG0480023152.01.T01:intron 50.0%
! TGCTTCTGGTCTTCCAGCAA+GGG - Chr4:81506816-81506835 MsG0480023152.01.T01:CDS 50.0%
! TTGCTTCTGGTCTTCCAGCA+AGG - Chr4:81506815-81506834 MsG0480023152.01.T01:CDS 50.0%
!! ACAACAGCTTGCTGGAACTG+GGG + Chr4:81505732-81505751 None:intergenic 50.0%
!! TAATCTTGGTGGGCTAGTGC+AGG - Chr4:81504599-81504618 MsG0480023152.01.T01:intron 50.0%
!! TGCAAGGAGGGTGTTGTGAA+GGG + Chr4:81502363-81502382 None:intergenic 50.0%
!! TTGCAAGGAGGGTGTTGTGA+AGG + Chr4:81502364-81502383 None:intergenic 50.0%
ACATGGCAGCTTCCAGCATG+CGG + Chr4:81506850-81506869 None:intergenic 55.0%
CACAGTTCCAACTGCTCCTG+AGG - Chr4:81502511-81502530 MsG0480023152.01.T01:three_prime_UTR 55.0%
CCCAAGCTGCAAATACAGGG+AGG + Chr4:81506712-81506731 None:intergenic 55.0%
CCCTCCCTGTATTTGCAGCT+TGG - Chr4:81506708-81506727 MsG0480023152.01.T01:intron 55.0%
CTGACACCAGCAGAATGAGC+AGG + Chr4:81503831-81503850 None:intergenic 55.0%
GAGAGAGGGATTGGAAGAGG+AGG + Chr4:81502449-81502468 None:intergenic 55.0%
GCCAGGTATCCTGAGACCAA+CGG + Chr4:81502610-81502629 None:intergenic 55.0%
GCTTCAAGATGGGTCTGGTG+TGG - Chr4:81506303-81506322 MsG0480023152.01.T01:CDS 55.0%
TCAAGAATCGCGATCGGGGT+TGG + Chr4:81503279-81503298 None:intergenic 55.0%
TCCCTGTTGCAAGGCCCTAA+CGG - Chr4:81504163-81504182 MsG0480023152.01.T01:intron 55.0%
TCCGTTAGGGCCTTGCAACA+GGG + Chr4:81504167-81504186 None:intergenic 55.0%
TTCCGTTAGGGCCTTGCAAC+AGG + Chr4:81504168-81504187 None:intergenic 55.0%
TTGGTCTCAGGATACCTGGC+AGG - Chr4:81502610-81502629 MsG0480023152.01.T01:three_prime_UTR 55.0%
! ACCGTTGGTCTCAGGATACC+TGG - Chr4:81502606-81502625 MsG0480023152.01.T01:three_prime_UTR 55.0%
! GGAGTGGTGGAGAGTGATGA+AGG + Chr4:81502275-81502294 None:intergenic 55.0%
!! CAACAGCTTGCTGGAACTGG+GGG + Chr4:81505731-81505750 None:intergenic 55.0%
!! GTCGGTGTTGGTGTCGAGTT+TGG - Chr4:81502937-81502956 MsG0480023152.01.T01:intron 55.0%
CCAATGCTTGCCCCGAGACA+AGG + Chr4:81506450-81506469 None:intergenic 60.0%
CCTTGTCTCGGGGCAAGCAT+TGG - Chr4:81506447-81506466 MsG0480023152.01.T01:intron 60.0%
GACGGTCCTGCTCATTCTGC+TGG - Chr4:81503822-81503841 MsG0480023152.01.T01:intron 60.0%
TGGCAAGGCAAGGGCCCATA+AGG + Chr4:81503259-81503278 None:intergenic 60.0%
! AATCGCGATCGGGGTTGGCA+AGG + Chr4:81503274-81503293 None:intergenic 60.0%
! GATCGGGGTTGGCAAGGCAA+GGG + Chr4:81503268-81503287 None:intergenic 60.0%
! TGGTCGCAACCGTTGGTCTC+AGG - Chr4:81502598-81502617 MsG0480023152.01.T01:three_prime_UTR 60.0%
! CGATCGGGGTTGGCAAGGCA+AGG + Chr4:81503269-81503288 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 81502207 81507204 81502207 ID=MsG0480023152.01;Name=MsG0480023152.01
Chr4 mRNA 81502251 81507204 81502251 ID=MsG0480023152.01.T01;Parent=MsG0480023152.01;Name=MsG0480023152.01.T01;_AED=0.49;_eAED=0.49;_QI=47|0.81|0.91|1|0.90|0.83|12|358|436
Chr4 exon 81502251 81502343 81502251 ID=MsG0480023152.01.T01:exon:5619;Parent=MsG0480023152.01.T01
Chr4 exon 81502365 81502685 81502365 ID=MsG0480023152.01.T01:exon:5618;Parent=MsG0480023152.01.T01
Chr4 five_prime_UTR 81507158 81507204 81507158 ID=MsG0480023152.01.T01:five_prime_utr;Parent=MsG0480023152.01.T01
Chr4 CDS 81506780 81507157 81506780 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81506226 81506345 81506226 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81505557 81505685 81505557 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81505207 81505311 81505207 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81504941 81505109 81504941 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81504791 81504867 81504791 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81504285 81504329 81504285 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81503365 81503403 81503365 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81503216 81503278 81503216 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81503002 81503131 81503002 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 CDS 81502630 81502685 81502630 ID=MsG0480023152.01.T01:cds;Parent=MsG0480023152.01.T01
Chr4 three_prime_UTR 81502365 81502629 81502365 ID=MsG0480023152.01.T01:three_prime_utr;Parent=MsG0480023152.01.T01
Chr4 three_prime_UTR 81502251 81502343 81502251 ID=MsG0480023152.01.T01:three_prime_utr;Parent=MsG0480023152.01.T01
Chr4 mRNA 81502207 81507204 81502207 ID=MsG0480023152.01.T02;Parent=MsG0480023152.01;Name=MsG0480023152.01.T02;_AED=0.49;_eAED=0.49;_QI=47|0.8|0.90|1|1|1|11|423|436
Chr4 exon 81502207 81502685 81502207 ID=MsG0480023152.01.T02:exon:5620;Parent=MsG0480023152.01.T02
Chr4 five_prime_UTR 81507158 81507204 81507158 ID=MsG0480023152.01.T02:five_prime_utr;Parent=MsG0480023152.01.T02
Chr4 CDS 81506780 81507157 81506780 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81506226 81506345 81506226 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81505557 81505685 81505557 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81505207 81505311 81505207 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81504941 81505109 81504941 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81504791 81504867 81504791 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81504285 81504329 81504285 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81503365 81503403 81503365 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81503216 81503278 81503216 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81503002 81503131 81503002 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 CDS 81502630 81502685 81502630 ID=MsG0480023152.01.T02:cds;Parent=MsG0480023152.01.T02
Chr4 three_prime_UTR 81502207 81502629 81502207 ID=MsG0480023152.01.T02:three_prime_utr;Parent=MsG0480023152.01.T02
Gene Sequence

>MsG0480023152.01.T01

ATGAATGTGTGGCTAACACCTTCATCACTCTCCACCACTCCAACAATACTTTCAACACCCCATCATCATCATCATCTTCATCTTCCAATTATTCCCACTAAGCTTTCCCTTCACAACACCCTCCTTGCAACTACACTCTCCTTTGGCTTATTCTTCTCCCCCTTCCCTTCTTCTGCATCTGCTCTTCAATCACCTCCTCTTCCAATCCCTCTCTCTACTTCCTCCGAAACATGCCGTGATGTTGAGCTTCGAGATATCACAGTTCCAACTGCTCCTGAGGTTGTTACCAATGAAGGACTTGTTCAGGAAGCTTGGCAGATTGTCAATGATGACTTTCTTGATACTGGTCGCAACCGTTGGTCTCAGGATACCTGGCAGCTAAAGAAGAATGATATTTTGAGCAATTCCATTCAGACAAGGTCAAAGGCACACAATATCATCAAGCGAATGCTGACCAGTTTGGGCGATCCTTATACACGTTTTCTTTCACCTGAGGAGATGGCGAGGTATGACATGACTGGTATTGGAATAAACCTTAGGGAAGTTACGGATGAAAATGGAGACCATAGGCTGAAGGTATTGGGATTAATATTGGACGGTCCTGCTCATTCTGCTGGTGTCAGACAGGGGGATGAAATATTGGCAGTTAATAACACAGAGGTAAATGGAAAATCAGCATTTGAAGTATCATCCCTGTTGCAAGGCCCTAACGGAACATCTGTGACTATTCAGCTCAAGCATGGAAACTGTGGGCCTGTTGAATCAATTGAAGTTCAGCGGCAATTTGTGGCTCGCACACCAGTCTCTTACCGTATGGAACAAACTGAAAGTGGTGCTGCTCATATTGGGTACATCCGCCTCAAAGAGTTCAATGCATTGGCTCGAAAAGATTTAGTCATCGCAATGAAGCGACTTCAAGACATGGGTGCCTCATATTTTGTATTGGATCTTAGAGATAATCTTGGTGGGCTAGTGCAGGCCGGAATTGAAATTGCAAAGCTTTTCCTAAACGAAGGAGACACGGTTTTAGTGAATGACAAGACTGCCAGTGCTAGTGAAATAGTTGCTTCTGCACTTCACGATAATTGTCGAGCTGTTCTCGTTGGAAAACGCACGTATGGCAAGGGCTTAATCCAATCTGTATTTGAGCTTCAAGATGGGTCTGGTGTGGTTATAACTGTTGGGAAGTATGTAACACCAAAGCACAAGGACATAAATGGCAACGGAATAGAGCCTGACTTCCAGAAACTTCCAGCTTGGGATGATGTCAGCCAACATCTTTCAAAATGCAGTATGCTTCAGCAAGGATAA

>MsG0480023152.01.T02

ATGAATGTGTGGCTAACACCTTCATCACTCTCCACCACTCCAACAATACTTTCAACACCCCATCATCATCATCATCTTCATCTTCCAATTATTCCCACTAAGCTTTCCCTTCACAACACCCTCCTTGCAACTACACTCTCCTTTGGCTTATTCTTCTCCCCCTTCCCTTCTTCTGCATCTGCTCTTCAATCACCTCCTCTTCCAATCCCTCTCTCTACTTCCTCCGAAACATGCCGTGATGTTGAGCTTCGAGATATCACAGTTCCAACTGCTCCTGAGGTTGTTACCAATGAAGGACTTGTTCAGGAAGCTTGGCAGATTGTCAATGATGACTTTCTTGATACTGGTCGCAACCGTTGGTCTCAGGATACCTGGCAGCTAAAGAAGAATGATATTTTGAGCAATTCCATTCAGACAAGGTCAAAGGCACACAATATCATCAAGCGAATGCTGACCAGTTTGGGCGATCCTTATACACGTTTTCTTTCACCTGAGGAGATGGCGAGGTATGACATGACTGGTATTGGAATAAACCTTAGGGAAGTTACGGATGAAAATGGAGACCATAGGCTGAAGGTATTGGGATTAATATTGGACGGTCCTGCTCATTCTGCTGGTGTCAGACAGGGGGATGAAATATTGGCAGTTAATAACACAGAGGTAAATGGAAAATCAGCATTTGAAGTATCATCCCTGTTGCAAGGCCCTAACGGAACATCTGTGACTATTCAGCTCAAGCATGGAAACTGTGGGCCTGTTGAATCAATTGAAGTTCAGCGGCAATTTGTGGCTCGCACACCAGTCTCTTACCGTATGGAACAAACTGAAAGTGGTGCTGCTCATATTGGGTACATCCGCCTCAAAGAGTTCAATGCATTGGCTCGAAAAGATTTAGTCATCGCAATGAAGCGACTTCAAGACATGGGTGCCTCATATTTTGTATTGGATCTTAGAGATAATCTTGGTGGGCTAGTGCAGGCCGGAATTGAAATTGCAAAGCTTTTCCTAAACGAAGGAGACACGGTTTTAGTGAATGACAAGACTGCCAGTGCTAGTGAAATAGTTGCTTCTGCACTTCACGATAATTGTCGAGCTGTTCTCGTTGGAAAACGCACGTATGGCAAGGGCTTAATCCAATCTGTATTTGAGCTTCAAGATGGGTCTGGTGTGGTTATAACTGTTGGGAAGTATGTAACACCAAAGCACAAGGACATAAATGGCAACGGAATAGAGCCTGACTTCCAGAAACTTCCAGCTTGGGATGATGTCAGCCAACATCTTTCAAAATGCAGTATGCTTCAGCAAGGATAA

Protein sequence

>MsG0480023152.01.T01

MNVWLTPSSLSTTPTILSTPHHHHHLHLPIIPTKLSLHNTLLATTLSFGLFFSPFPSSASALQSPPLPIPLSTSSETCRDVELRDITVPTAPEVVTNEGLVQEAWQIVNDDFLDTGRNRWSQDTWQLKKNDILSNSIQTRSKAHNIIKRMLTSLGDPYTRFLSPEEMARYDMTGIGINLREVTDENGDHRLKVLGLILDGPAHSAGVRQGDEILAVNNTEVNGKSAFEVSSLLQGPNGTSVTIQLKHGNCGPVESIEVQRQFVARTPVSYRMEQTESGAAHIGYIRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGLVQAGIEIAKLFLNEGDTVLVNDKTASASEIVASALHDNCRAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPKHKDINGNGIEPDFQKLPAWDDVSQHLSKCSMLQQG*

>MsG0480023152.01.T02

MNVWLTPSSLSTTPTILSTPHHHHHLHLPIIPTKLSLHNTLLATTLSFGLFFSPFPSSASALQSPPLPIPLSTSSETCRDVELRDITVPTAPEVVTNEGLVQEAWQIVNDDFLDTGRNRWSQDTWQLKKNDILSNSIQTRSKAHNIIKRMLTSLGDPYTRFLSPEEMARYDMTGIGINLREVTDENGDHRLKVLGLILDGPAHSAGVRQGDEILAVNNTEVNGKSAFEVSSLLQGPNGTSVTIQLKHGNCGPVESIEVQRQFVARTPVSYRMEQTESGAAHIGYIRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGLVQAGIEIAKLFLNEGDTVLVNDKTASASEIVASALHDNCRAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPKHKDINGNGIEPDFQKLPAWDDVSQHLSKCSMLQQG*