AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025961.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025961.01.T01 MTR_5g048470 99.329 149 1 0 1 149 210 358 7.41e-107 308
MsG0580025961.01.T01 MTR_8g064200 96.644 149 5 0 1 149 214 362 5.59e-104 301
MsG0580025961.01.T01 MTR_8g064200 96.644 149 5 0 1 149 209 357 5.80e-104 301
MsG0580025961.01.T01 MTR_0056s0160 81.879 149 27 0 1 149 88 236 1.97e-90 263
MsG0580025961.01.T01 MTR_0009s0400 68.027 147 47 0 3 149 1 147 1.94e-80 234
MsG0580025961.01.T01 MTR_5g055680 66.443 149 50 0 1 149 203 351 2.00e-75 228
MsG0580025961.01.T01 MTR_0009s0050 66.216 148 50 0 2 149 24 171 3.64e-75 222
MsG0580025961.01.T01 MTR_5g048740 67.114 149 49 0 1 149 202 350 1.29e-74 226
MsG0580025961.01.T01 MTR_5g048550 70.470 149 44 0 1 149 203 351 1.90e-74 226
MsG0580025961.01.T01 MTR_5g055900 67.114 149 49 0 1 149 203 351 7.61e-74 224
MsG0580025961.01.T01 MTR_0009s0480 64.430 149 53 0 1 149 202 350 1.33e-73 224
MsG0580025961.01.T01 MTR_0009s0050 66.216 148 50 0 2 149 106 253 1.34e-73 221
MsG0580025961.01.T01 MTR_2g072910 68.456 149 47 0 1 149 209 357 1.55e-73 224
MsG0580025961.01.T01 MTR_0009s0050 66.216 148 50 0 2 149 106 253 1.60e-73 221
MsG0580025961.01.T01 MTR_5g055690 67.785 149 48 0 1 149 204 352 8.18e-73 222
MsG0580025961.01.T01 MTR_0009s0050 66.216 148 50 0 2 149 204 351 1.51e-72 221
MsG0580025961.01.T01 MTR_0009s0050 66.216 148 50 0 2 149 204 351 1.66e-72 221
MsG0580025961.01.T01 MTR_5g048850 68.456 149 47 0 1 149 203 351 1.96e-72 221
MsG0580025961.01.T01 MTR_5g055800 65.986 147 49 1 1 147 203 348 2.03e-71 218
MsG0580025961.01.T01 MTR_2g072890 63.758 149 54 0 1 149 210 358 2.16e-71 218
MsG0580025961.01.T01 MTR_5g048570 62.416 149 56 0 1 149 201 349 5.65e-71 217
MsG0580025961.01.T01 MTR_5g055820 65.101 149 52 0 1 149 204 352 4.73e-70 215
MsG0580025961.01.T01 MTR_0328s0030 61.745 149 57 0 1 149 201 349 5.34e-70 214
MsG0580025961.01.T01 MTR_1g033810 58.904 146 60 0 1 146 205 350 1.36e-60 191
MsG0580025961.01.T01 MTR_2g437380 45.270 148 80 1 1 147 116 263 3.15e-44 146
MsG0580025961.01.T01 MTR_2g437380 45.270 148 80 1 1 147 210 357 3.47e-43 146
MsG0580025961.01.T01 MTR_7g063730 39.865 148 89 0 1 148 220 367 1.04e-41 142
MsG0580025961.01.T01 MTR_7g062580 39.189 148 90 0 1 148 211 358 6.76e-41 140
MsG0580025961.01.T01 MTR_7g062570 38.776 147 90 0 1 147 211 357 1.95e-40 139
MsG0580025961.01.T01 MTR_1g062110 42.466 146 83 1 1 146 229 373 4.54e-40 138
MsG0580025961.01.T01 MTR_3g026150 39.726 146 87 1 1 146 113 257 1.60e-39 134
MsG0580025961.01.T01 MTR_4g015790 45.238 126 69 0 1 126 225 350 2.12e-39 136
MsG0580025961.01.T01 MTR_7g102820 41.259 143 83 1 4 146 239 380 3.15e-39 136
MsG0580025961.01.T01 MTR_3g092890 44.853 136 75 0 1 136 192 327 3.55e-39 135
MsG0580025961.01.T01 MTR_7g068650 42.857 126 72 0 1 126 217 342 4.08e-39 135
MsG0580025961.01.T01 MTR_5g065010 44.138 145 79 2 3 146 199 342 1.13e-38 134
MsG0580025961.01.T01 MTR_3g026150 39.726 146 87 1 1 146 216 360 1.29e-38 134
MsG0580025961.01.T01 MTR_8g024120 41.549 142 82 1 1 142 199 339 3.07e-38 132
MsG0580025961.01.T01 MTR_7g062550 37.838 148 92 0 2 149 217 364 3.57e-38 133
MsG0580025961.01.T01 MTR_5g082750 42.063 126 73 0 1 126 211 336 5.43e-38 132
MsG0580025961.01.T01 MTR_3g117420 43.662 142 78 1 1 142 211 350 5.65e-38 132
MsG0580025961.01.T01 MTR_1g032140 42.361 144 80 3 1 142 219 361 6.78e-37 130
MsG0580025961.01.T01 MTR_7g062600 37.333 150 93 1 1 149 207 356 9.05e-37 129
MsG0580025961.01.T01 MTR_8g074070 41.096 146 84 1 1 146 192 335 1.13e-36 128
MsG0580025961.01.T01 MTR_8g074070 41.096 146 84 1 1 146 211 354 1.49e-36 129
MsG0580025961.01.T01 MTR_8g074050 40.411 146 85 1 1 146 211 354 1.51e-36 129
MsG0580025961.01.T01 MTR_3g070860 36.486 148 94 0 1 148 212 359 1.56e-36 129
MsG0580025961.01.T01 MTR_3g063180 38.816 152 88 2 1 148 204 354 3.52e-36 127
MsG0580025961.01.T01 MTR_4g116010 40.690 145 84 1 2 146 206 348 1.05e-35 126
MsG0580025961.01.T01 MTR_7g105070 37.671 146 86 3 6 147 219 363 1.06e-35 126
MsG0580025961.01.T01 MTR_5g048850 79.412 68 14 0 1 68 203 270 2.41e-35 124
MsG0580025961.01.T01 MTR_1g032250 41.497 147 83 3 1 145 226 371 2.47e-35 125
MsG0580025961.01.T01 MTR_0009s0480 77.612 67 15 0 1 67 202 268 6.60e-35 122
MsG0580025961.01.T01 MTR_7g062560 33.784 148 98 0 1 148 208 355 1.33e-34 124
MsG0580025961.01.T01 MTR_5g032870 41.353 133 77 1 2 134 202 333 1.26e-33 120
MsG0580025961.01.T01 MTR_1g032220 40.136 147 85 3 1 145 226 371 2.11e-33 120
MsG0580025961.01.T01 MTR_3g117485 42.063 126 71 1 1 126 139 262 3.96e-33 118
MsG0580025961.01.T01 MTR_2g072910 72.857 70 19 0 1 70 209 278 4.75e-33 117
MsG0580025961.01.T01 MTR_3g072810 37.594 133 82 1 1 133 197 328 6.86e-33 119
MsG0580025961.01.T01 MTR_1g034140 40.310 129 74 2 1 127 192 319 9.42e-33 118
MsG0580025961.01.T01 MTR_5g055690 76.119 67 16 0 1 67 204 270 9.81e-33 117
MsG0580025961.01.T01 MTR_3g117485 42.063 126 71 1 1 126 211 334 1.36e-32 118
MsG0580025961.01.T01 MTR_3g045230 38.889 144 85 2 1 142 208 350 4.38e-32 117
MsG0580025961.01.T01 MTR_8g041620 34.667 150 93 2 4 149 229 377 7.04e-32 117
MsG0580025961.01.T01 MTR_4g132770 36.641 131 81 1 2 130 28 158 1.48e-31 110
MsG0580025961.01.T01 MTR_2g069090 36.986 146 89 1 4 146 227 372 1.59e-31 115
MsG0580025961.01.T01 MTR_3g083370 37.594 133 82 1 6 138 162 293 2.29e-31 114
MsG0580025961.01.T01 MTR_2g025120 34.783 138 89 1 2 138 158 295 3.08e-31 114
MsG0580025961.01.T01 MTR_6g015950 40.000 130 78 0 4 133 197 326 3.84e-31 114
MsG0580025961.01.T01 MTR_3g091360 38.926 149 89 2 1 149 211 357 4.21e-31 114
MsG0580025961.01.T01 MTR_3g043900 38.194 144 86 2 1 142 207 349 5.36e-31 114
MsG0580025961.01.T01 MTR_5g059130 40.157 127 75 1 1 127 202 327 6.23e-31 113
MsG0580025961.01.T01 MTR_7g102720 40.000 140 81 2 5 142 193 331 7.10e-31 113
MsG0580025961.01.T01 MTR_4g087140 41.667 120 67 2 1 118 201 319 8.81e-31 113
MsG0580025961.01.T01 MTR_6g464620 42.623 122 69 1 1 122 231 351 9.00e-31 114
MsG0580025961.01.T01 MTR_4g087090 41.406 128 72 2 1 126 199 325 1.44e-30 113
MsG0580025961.01.T01 MTR_5g032880 39.394 132 79 1 2 133 194 324 1.44e-30 115
MsG0580025961.01.T01 MTR_5g032880 38.346 133 81 1 2 134 540 671 2.70e-28 109
MsG0580025961.01.T01 MTR_8g041600 34.459 148 92 2 4 147 229 375 1.73e-30 113
MsG0580025961.01.T01 MTR_1g048940 38.000 150 88 3 3 149 206 353 2.06e-30 112
MsG0580025961.01.T01 MTR_2g102570 35.714 140 85 3 1 136 208 346 2.32e-30 112
MsG0580025961.01.T01 MTR_1g093110 34.694 147 91 2 4 146 229 374 3.18e-30 112
MsG0580025961.01.T01 MTR_4g123020 42.857 140 74 3 1 135 172 310 3.68e-30 111
MsG0580025961.01.T01 MTR_1g093120 34.247 146 92 2 4 146 226 370 4.60e-30 112
MsG0580025961.01.T01 MTR_8g008930 37.956 137 81 2 4 137 221 356 5.32e-30 111
MsG0580025961.01.T01 MTR_8g009170 35.374 147 90 3 4 146 221 366 6.94e-30 111
MsG0580025961.01.T01 MTR_2g069190 36.301 146 89 2 4 146 227 371 9.87e-30 111
MsG0580025961.01.T01 MTR_4g087110 37.143 140 85 2 1 138 200 338 1.04e-29 110
MsG0580025961.01.T01 MTR_7g029655 34.437 151 92 3 4 148 223 372 1.11e-29 110
MsG0580025961.01.T01 MTR_1g102070 42.623 122 69 1 1 122 226 346 1.24e-29 110
MsG0580025961.01.T01 MTR_8g009160 37.226 137 82 2 4 137 220 355 1.36e-29 110
MsG0580025961.01.T01 MTR_1g070135 35.135 148 95 1 1 148 195 341 2.20e-29 109
MsG0580025961.01.T01 MTR_5g085330 35.294 136 85 1 6 138 163 298 2.30e-29 109
MsG0580025961.01.T01 MTR_1g070085 37.410 139 86 1 1 139 117 254 2.47e-29 108
MsG0580025961.01.T01 MTR_8g009090 36.957 138 83 2 3 137 219 355 3.96e-29 109
MsG0580025961.01.T01 MTR_3g091350 37.584 149 91 2 1 149 218 364 4.37e-29 109
MsG0580025961.01.T01 MTR_3g088565 36.986 146 91 1 2 147 159 303 5.31e-29 108
MsG0580025961.01.T01 MTR_8g009080 34.307 137 86 2 4 137 253 388 7.77e-29 109
MsG0580025961.01.T01 MTR_2g068960 37.879 132 74 3 4 128 222 352 8.30e-29 108
MsG0580025961.01.T01 MTR_8g028435 35.766 137 84 2 4 137 220 355 8.39e-29 108
MsG0580025961.01.T01 MTR_3g072820 40.476 126 74 1 1 126 200 324 8.76e-29 108
MsG0580025961.01.T01 MTR_7g045650 50.617 81 40 0 1 81 216 296 9.42e-29 107
MsG0580025961.01.T01 MTR_0032s0040 35.099 151 93 3 1 147 225 374 1.22e-28 108
MsG0580025961.01.T01 MTR_1g070085 37.410 139 86 1 1 139 195 332 1.23e-28 107
MsG0580025961.01.T01 MTR_1g070085 37.410 139 86 1 1 139 195 332 1.23e-28 107
MsG0580025961.01.T01 MTR_7g056347 32.215 149 94 3 4 146 226 373 1.29e-28 108
MsG0580025961.01.T01 MTR_8g033380 44.068 118 65 1 1 118 220 336 1.37e-28 108
MsG0580025961.01.T01 MTR_2g083000 38.168 131 78 2 1 129 187 316 1.47e-28 107
MsG0580025961.01.T01 MTR_2g069010 35.252 139 82 2 4 135 228 365 1.48e-28 108
MsG0580025961.01.T01 MTR_2g069300 32.877 146 95 1 4 146 213 358 1.70e-28 107
MsG0580025961.01.T01 MTR_8g009110 34.307 137 86 2 4 137 221 356 2.24e-28 107
MsG0580025961.01.T01 MTR_5g011250 38.000 150 83 3 1 149 212 352 2.40e-28 107
MsG0580025961.01.T01 MTR_4g093840 35.374 147 93 2 1 146 221 366 2.44e-28 107
MsG0580025961.01.T01 MTR_2g069060 35.338 133 84 2 4 135 208 339 2.46e-28 107
MsG0580025961.01.T01 MTR_1g034120 39.167 120 70 2 1 118 202 320 2.68e-28 107
MsG0580025961.01.T01 MTR_1g070080 40.310 129 76 1 3 131 197 324 4.56e-28 106
MsG0580025961.01.T01 MTR_8g469400 30.872 149 96 2 4 146 213 360 4.70e-28 106
MsG0580025961.01.T01 MTR_2g068840 35.172 145 86 2 1 138 210 353 4.96e-28 106
MsG0580025961.01.T01 MTR_7g451860 38.095 126 71 2 1 126 198 316 7.75e-28 105
MsG0580025961.01.T01 MTR_7g047670 38.095 126 71 2 1 126 198 316 7.75e-28 105
MsG0580025961.01.T01 MTR_7g081710 31.724 145 96 2 3 146 209 351 8.06e-28 105
MsG0580025961.01.T01 MTR_1g034060 39.167 120 70 2 1 118 202 320 9.86e-28 105
MsG0580025961.01.T01 MTR_8g062600 31.544 149 95 2 4 146 226 373 1.13e-27 105
MsG0580025961.01.T01 MTR_4g115990 37.410 139 85 1 2 140 185 321 1.37e-27 104
MsG0580025961.01.T01 MTR_4g087130 39.535 129 75 2 1 127 199 326 1.51e-27 105
MsG0580025961.01.T01 MTR_5g059140 38.261 115 70 1 1 115 202 315 1.98e-27 104
MsG0580025961.01.T01 MTR_7g016090 38.281 128 79 0 6 133 200 327 4.48e-27 103
MsG0580025961.01.T01 MTR_7g016090 38.281 128 79 0 6 133 198 325 4.54e-27 103
MsG0580025961.01.T01 MTR_2g069020 35.338 133 81 2 4 132 226 357 5.87e-27 103
MsG0580025961.01.T01 MTR_2g069020 35.338 133 81 2 4 132 226 357 7.58e-27 103
MsG0580025961.01.T01 MTR_1g070100 36.054 147 88 3 1 147 113 253 8.26e-27 101
MsG0580025961.01.T01 MTR_4g087100 47.872 94 46 2 1 92 200 292 8.90e-27 103
MsG0580025961.01.T01 MTR_8g009180 35.766 137 84 2 4 137 150 285 1.46e-26 101
MsG0580025961.01.T01 MTR_2g069210 34.247 146 92 2 4 146 223 367 1.49e-26 102
MsG0580025961.01.T01 MTR_2g068950 34.848 132 78 3 4 128 222 352 1.55e-26 102
MsG0580025961.01.T01 MTR_5g005570 37.302 126 72 2 1 126 191 309 1.67e-26 102
MsG0580025961.01.T01 MTR_4g024660 30.769 143 92 2 1 137 223 364 1.71e-26 102
MsG0580025961.01.T01 MTR_3g096500 37.500 128 79 1 1 128 233 359 2.00e-26 102
MsG0580025961.01.T01 MTR_1g081840 40.541 111 65 1 1 111 220 329 2.29e-26 102
MsG0580025961.01.T01 MTR_1g093140 30.405 148 97 2 4 146 232 378 3.72e-26 101
MsG0580025961.01.T01 MTR_4g117880 36.220 127 77 3 3 126 220 345 5.53e-26 101
MsG0580025961.01.T01 MTR_4g087120 32.680 153 96 3 1 147 200 351 7.08e-26 100
MsG0580025961.01.T01 MTR_3g088745 37.313 134 80 2 1 131 203 335 7.26e-26 100
MsG0580025961.01.T01 MTR_8g075890 37.226 137 80 4 3 136 200 333 8.78e-26 100
MsG0580025961.01.T01 MTR_2g083030 37.302 126 72 2 1 126 192 310 3.41e-25 98.6
MsG0580025961.01.T01 MTR_7g056353 31.757 148 94 3 4 145 200 346 6.52e-25 99.4
MsG0580025961.01.T01 MTR_8g075830 37.226 137 80 4 3 136 200 333 8.28e-25 97.8
MsG0580025961.01.T01 MTR_6g092620 40.741 108 63 1 6 112 162 269 9.72e-25 96.7
MsG0580025961.01.T01 MTR_8g461330 33.333 156 94 3 1 147 180 334 1.61e-24 96.7
MsG0580025961.01.T01 MTR_3g058610 40.566 106 60 2 3 106 200 304 1.77e-24 97.1
MsG0580025961.01.T01 MTR_8g093930 37.209 129 79 2 1 128 211 338 2.43e-24 96.7
MsG0580025961.01.T01 MTR_8g009120 33.333 138 88 2 3 137 208 344 3.18e-24 96.3
MsG0580025961.01.T01 MTR_1g043760 33.577 137 87 2 4 137 212 347 4.86e-24 95.9
MsG0580025961.01.T01 MTR_1g043810 33.562 146 93 2 4 146 213 357 5.07e-24 95.9
MsG0580025961.01.T01 MTR_1g070120 33.083 133 88 1 1 133 195 326 5.86e-24 95.5
MsG0580025961.01.T01 MTR_2g033270 38.000 150 83 6 1 142 166 313 6.71e-24 94.7
MsG0580025961.01.T01 MTR_7g016080 36.923 130 74 1 4 133 198 319 6.85e-24 95.1
MsG0580025961.01.T01 MTR_5g022020 40.566 106 60 2 3 106 200 304 1.32e-23 94.7
MsG0580025961.01.T01 MTR_8g063070 27.972 143 96 2 1 137 223 364 1.59e-23 94.7
MsG0580025961.01.T01 MTR_4g074130 43.158 95 52 2 1 94 195 288 2.82e-23 93.6
MsG0580025961.01.T01 MTR_1g043770 34.307 137 86 2 4 137 211 346 4.11e-23 93.2
MsG0580025961.01.T01 MTR_1g070185 32.090 134 90 1 4 137 226 358 1.34e-22 92.0
MsG0580025961.01.T01 MTR_1g043775 35.714 126 77 2 4 126 213 337 2.62e-22 91.3
MsG0580025961.01.T01 MTR_1g011580 32.394 142 90 4 1 141 214 350 3.34e-22 90.9
MsG0580025961.01.T01 MTR_2g019370 30.070 143 91 3 1 135 181 322 3.65e-22 90.5
MsG0580025961.01.T01 MTR_8g006930 30.872 149 96 3 4 146 226 373 4.43e-22 90.5
MsG0580025961.01.T01 MTR_1g086550 30.061 163 98 4 1 149 175 335 5.20e-22 90.1
MsG0580025961.01.T01 MTR_4g119410 30.612 147 95 2 6 146 228 373 6.00e-22 90.1
MsG0580025961.01.T01 MTR_1g062110 46.154 91 47 2 1 90 229 318 1.97e-21 88.2
MsG0580025961.01.T01 MTR_7g056393 28.289 152 102 3 1 146 223 373 3.68e-21 88.2
MsG0580025961.01.T01 MTR_8g093980 38.739 111 66 2 1 110 222 331 3.87e-21 88.2
MsG0580025961.01.T01 MTR_1g070110 36.522 115 72 1 18 132 107 220 2.54e-20 84.0
MsG0580025961.01.T01 MTR_2g070870 37.391 115 66 3 1 110 177 290 5.34e-20 84.3
MsG0580025961.01.T01 MTR_1g043840 32.308 130 80 3 4 126 95 223 9.67e-20 84.0
MsG0580025961.01.T01 MTR_2g068800 42.529 87 42 2 1 80 191 276 2.06e-19 82.4
MsG0580025961.01.T01 MTR_7g078010 29.530 149 98 3 4 146 226 373 3.12e-19 82.8
MsG0580025961.01.T01 MTR_3g464530 36.170 94 57 1 1 94 189 279 4.34e-18 79.3
MsG0580025961.01.T01 MTR_3g026150 43.284 67 38 0 1 67 216 282 6.96e-18 78.2
MsG0580025961.01.T01 MTR_3g040410 32.979 94 62 1 16 109 177 269 1.61e-17 77.4
MsG0580025961.01.T01 MTR_1g032240 32.192 146 71 5 1 145 59 177 1.69e-17 75.1
MsG0580025961.01.T01 MTR_8g009150 26.027 146 84 2 4 146 221 345 2.93e-17 77.0
MsG0580025961.01.T01 MTR_4g011720 31.852 135 90 2 1 134 167 300 4.06e-17 76.6
MsG0580025961.01.T01 MTR_8g009170 44.156 77 40 2 4 78 221 296 1.46e-16 74.7
MsG0580025961.01.T01 MTR_2g025120 42.424 66 38 0 2 67 158 223 1.86e-16 73.6
MsG0580025961.01.T01 MTR_4g096840 32.773 119 73 3 1 113 182 299 2.34e-16 74.7
MsG0580025961.01.T01 MTR_2g069060 46.875 64 33 1 4 67 186 248 7.83e-16 72.4
MsG0580025961.01.T01 MTR_3g083370 45.161 62 34 0 6 67 162 223 1.26e-15 71.2
MsG0580025961.01.T01 MTR_1g070135 46.269 67 35 1 1 67 195 260 1.30e-15 72.0
MsG0580025961.01.T01 MTR_1g027290 34.091 132 82 4 1 129 192 321 1.46e-15 72.4
MsG0580025961.01.T01 MTR_7g077670 41.818 110 57 5 1 105 165 272 2.68e-15 71.6
MsG0580025961.01.T01 MTR_6g088665 33.898 118 71 3 15 127 206 321 3.36e-15 71.2
MsG0580025961.01.T01 MTR_6g088665 33.898 118 71 3 15 127 207 322 3.45e-15 71.2
MsG0580025961.01.T01 MTR_8g030880 43.158 95 51 3 13 105 179 272 5.01e-15 70.9
MsG0580025961.01.T01 MTR_8g041600 42.188 64 36 1 4 67 229 291 9.35e-15 70.1
MsG0580025961.01.T01 MTR_8g102600 33.621 116 70 3 21 131 151 264 1.34e-14 69.3
MsG0580025961.01.T01 MTR_8g102600 33.621 116 70 3 21 131 201 314 2.12e-14 68.9
MsG0580025961.01.T01 MTR_7g090520 40.964 83 48 1 16 97 184 266 2.13e-14 68.9
MsG0580025961.01.T01 MTR_8g009080 42.857 63 35 1 4 66 253 314 5.36e-14 68.2
MsG0580025961.01.T01 MTR_4g100600 32.117 137 85 4 1 131 170 304 1.10e-13 67.0
MsG0580025961.01.T01 MTR_8g009080 43.333 60 33 1 4 63 253 311 8.24e-13 64.7
MsG0580025961.01.T01 MTR_3g108520 28.777 139 93 5 2 136 171 307 1.43e-12 63.9
MsG0580025961.01.T01 MTR_4g100590 31.148 122 77 3 15 131 133 252 1.80e-12 63.2
MsG0580025961.01.T01 MTR_3g040440 33.803 71 46 1 16 86 15 84 3.15e-12 62.4
MsG0580025961.01.T01 MTR_4g100590 31.148 122 77 3 15 131 180 299 3.37e-12 62.8
MsG0580025961.01.T01 MTR_4g021360 32.381 105 68 3 5 108 173 275 8.18e-12 61.6
MsG0580025961.01.T01 MTR_1g043770 42.857 63 35 1 4 66 211 272 2.71e-11 60.1
MsG0580025961.01.T01 MTR_4g021380 29.907 107 73 2 5 110 176 281 7.96e-11 58.9
MsG0580025961.01.T01 MTR_3g464530 37.313 67 39 1 1 67 189 252 9.04e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025961.01.T01 AT4G25310 59.589 146 59 0 1 146 208 353 5.33e-65 202
MsG0580025961.01.T01 AT4G25300 58.904 146 60 0 1 146 117 262 6.54e-65 199
MsG0580025961.01.T01 AT1G17020 58.904 146 60 0 1 146 213 358 5.38e-64 199
MsG0580025961.01.T01 AT4G25300 58.904 146 60 0 1 146 211 356 1.71e-63 198
MsG0580025961.01.T01 AT1G17010 57.823 147 62 0 1 147 213 359 2.68e-61 192
MsG0580025961.01.T01 AT1G78550 53.425 146 68 0 1 146 133 278 2.33e-59 185
MsG0580025961.01.T01 AT1G78550 53.425 146 68 0 1 146 211 356 1.64e-58 185
MsG0580025961.01.T01 AT4G25310 54.839 124 56 0 23 146 202 325 1.82e-46 154
MsG0580025961.01.T01 AT3G21420 49.306 144 71 2 1 142 215 358 8.67e-45 150
MsG0580025961.01.T01 AT5G05600 37.324 142 89 0 1 142 224 365 4.92e-37 130
MsG0580025961.01.T01 AT1G04380 40.940 149 84 2 1 146 198 345 1.20e-36 129
MsG0580025961.01.T01 AT2G36690 40.278 144 85 1 3 146 221 363 2.36e-36 128
MsG0580025961.01.T01 AT2G36690 40.278 144 85 1 3 146 221 363 2.36e-36 128
MsG0580025961.01.T01 AT5G59530 38.255 149 88 2 1 146 217 364 2.61e-36 128
MsG0580025961.01.T01 AT3G11180 38.028 142 88 0 1 142 253 394 2.73e-36 129
MsG0580025961.01.T01 AT3G55970 36.301 146 92 1 1 145 215 360 3.52e-36 128
MsG0580025961.01.T01 AT3G11180 41.270 126 74 0 1 126 253 378 3.65e-36 129
MsG0580025961.01.T01 AT4G16330 40.141 142 80 2 3 144 120 256 3.76e-36 125
MsG0580025961.01.T01 AT2G38240 37.162 148 93 0 1 148 206 353 4.03e-36 127
MsG0580025961.01.T01 AT4G10490 37.415 147 89 2 1 145 199 344 4.34e-36 127
MsG0580025961.01.T01 AT5G54000 44.275 131 71 1 2 130 127 257 4.72e-36 125
MsG0580025961.01.T01 AT5G24530 40.136 147 85 1 1 144 192 338 6.33e-36 127
MsG0580025961.01.T01 AT1G49390 45.455 121 66 0 2 122 127 247 1.31e-35 124
MsG0580025961.01.T01 AT5G20400 45.802 131 69 1 2 130 206 336 1.74e-35 125
MsG0580025961.01.T01 AT5G59540 38.255 149 88 2 1 146 219 366 2.01e-35 126
MsG0580025961.01.T01 AT5G54000 44.275 131 71 1 2 130 207 337 2.65e-35 125
MsG0580025961.01.T01 AT4G16330 40.141 142 80 2 3 144 226 362 2.81e-35 125
MsG0580025961.01.T01 AT1G49390 45.455 121 66 0 2 122 206 326 6.81e-35 124
MsG0580025961.01.T01 AT4G10500 35.616 146 92 2 1 145 201 345 1.85e-34 123
MsG0580025961.01.T01 AT5G43450 36.806 144 87 2 1 141 215 357 5.24e-34 122
MsG0580025961.01.T01 AT5G43440 36.242 149 91 2 1 146 218 365 1.77e-33 120
MsG0580025961.01.T01 AT3G13610 37.500 144 87 2 1 142 215 357 1.78e-33 120
MsG0580025961.01.T01 AT1G04350 39.456 147 84 3 4 146 215 360 1.99e-33 120
MsG0580025961.01.T01 AT3G60290 39.597 149 85 4 1 147 210 355 4.04e-33 120
MsG0580025961.01.T01 AT1G06620 40.146 137 78 2 4 137 221 356 1.01e-32 119
MsG0580025961.01.T01 AT5G20550 43.182 132 73 2 2 131 206 337 5.67e-32 116
MsG0580025961.01.T01 AT2G44800 36.986 146 89 2 1 145 210 353 7.58e-32 116
MsG0580025961.01.T01 AT1G55290 38.889 144 85 2 1 142 215 357 1.06e-31 116
MsG0580025961.01.T01 AT1G15550 34.109 129 83 2 1 128 212 339 1.80e-30 112
MsG0580025961.01.T01 AT2G30840 36.913 149 90 3 1 146 215 362 4.81e-30 112
MsG0580025961.01.T01 AT1G12010 35.766 137 86 1 2 138 161 295 1.03e-29 110
MsG0580025961.01.T01 AT4G21200 47.573 103 53 1 1 103 195 296 1.24e-29 110
MsG0580025961.01.T01 AT5G07480 34.416 154 92 3 1 147 95 246 2.33e-29 107
MsG0580025961.01.T01 AT1G44090 43.636 110 61 1 1 110 229 337 7.59e-29 108
MsG0580025961.01.T01 AT1G05010 40.909 110 64 1 2 110 158 267 8.34e-29 107
MsG0580025961.01.T01 AT1G62380 39.344 122 71 2 2 120 161 282 1.10e-28 107
MsG0580025961.01.T01 AT3G61400 38.686 137 78 4 4 135 225 360 1.29e-28 108
MsG0580025961.01.T01 AT5G07480 34.416 154 92 3 1 147 204 355 1.54e-28 107
MsG0580025961.01.T01 AT1G60980 46.667 105 55 1 1 105 227 330 1.89e-28 107
MsG0580025961.01.T01 AT1G03400 39.007 141 81 3 1 137 204 343 2.05e-28 107
MsG0580025961.01.T01 AT1G03410 38.849 139 80 3 1 135 214 351 2.59e-28 107
MsG0580025961.01.T01 AT3G19000 39.535 129 75 2 1 127 202 329 3.02e-28 107
MsG0580025961.01.T01 AT3G19010 35.294 153 92 3 1 147 197 348 3.42e-28 106
MsG0580025961.01.T01 AT3G19010 35.294 153 92 3 1 147 197 348 3.42e-28 106
MsG0580025961.01.T01 AT1G03410 38.971 136 78 3 4 135 254 388 3.54e-28 107
MsG0580025961.01.T01 AT1G77330 42.857 105 60 0 2 106 161 265 4.36e-28 105
MsG0580025961.01.T01 AT4G22880 42.017 119 67 2 1 118 212 329 6.77e-28 106
MsG0580025961.01.T01 AT4G22880 42.017 119 67 2 1 118 212 329 6.77e-28 106
MsG0580025961.01.T01 AT4G22880 42.017 119 67 2 1 118 212 329 6.77e-28 106
MsG0580025961.01.T01 AT5G63590 42.857 126 65 3 1 120 172 296 7.67e-28 105
MsG0580025961.01.T01 AT2G30830 36.496 137 83 3 4 137 214 349 1.15e-27 105
MsG0580025961.01.T01 AT3G19010 34.641 153 93 3 1 147 167 318 1.26e-27 104
MsG0580025961.01.T01 AT4G25420 40.625 128 75 1 1 128 227 353 1.56e-27 105
MsG0580025961.01.T01 AT1G80340 35.156 128 81 2 1 127 205 331 1.80e-27 104
MsG0580025961.01.T01 AT3G12900 36.301 146 91 2 1 145 211 355 3.13e-27 104
MsG0580025961.01.T01 AT5G07200 44.545 110 60 1 1 110 226 334 3.89e-27 104
MsG0580025961.01.T01 AT1G06650 33.333 141 89 3 1 137 221 360 4.14e-27 104
MsG0580025961.01.T01 AT3G51240 36.496 137 81 4 3 136 115 248 5.53e-27 102
MsG0580025961.01.T01 AT5G12270 34.437 151 94 2 1 146 209 359 6.59e-27 103
MsG0580025961.01.T01 AT1G80330 36.923 130 79 3 1 128 207 335 1.05e-26 102
MsG0580025961.01.T01 AT5G08640 36.296 135 81 2 1 135 201 330 1.41e-26 102
MsG0580025961.01.T01 AT5G08640 36.296 135 81 2 1 135 201 330 1.41e-26 102
MsG0580025961.01.T01 AT5G51810 44.248 113 61 2 1 113 225 335 1.68e-26 102
MsG0580025961.01.T01 AT1G06645 33.333 141 89 3 1 137 231 370 1.71e-26 102
MsG0580025961.01.T01 AT3G51240 36.496 137 81 4 3 136 199 332 2.32e-26 102
MsG0580025961.01.T01 AT2G19590 36.567 134 78 2 6 138 152 279 5.67e-26 100
MsG0580025961.01.T01 AT2G19590 41.667 108 62 1 6 112 167 274 7.71e-26 99.8
MsG0580025961.01.T01 AT1G06640 32.000 150 97 3 1 146 221 369 8.61e-26 100
MsG0580025961.01.T01 AT2G30840 34.899 149 87 4 1 146 215 356 9.92e-26 100
MsG0580025961.01.T01 AT1G02400 34.752 141 86 4 1 136 180 319 3.46e-23 93.2
MsG0580025961.01.T01 AT1G03400 32.544 169 81 4 1 137 204 371 6.67e-23 92.8
MsG0580025961.01.T01 AT1G78440 31.944 144 89 3 1 136 170 312 1.53e-22 91.3
MsG0580025961.01.T01 AT5G43935 33.333 126 80 2 1 126 161 282 9.41e-22 88.6
MsG0580025961.01.T01 AT1G47990 32.667 150 86 5 1 136 161 309 2.68e-21 87.8
MsG0580025961.01.T01 AT5G63600 36.508 126 79 1 1 126 185 309 3.74e-21 87.8
MsG0580025961.01.T01 AT2G25450 32.450 151 95 4 1 146 211 359 4.07e-21 87.8
MsG0580025961.01.T01 AT1G50960 42.553 94 53 1 1 94 196 288 8.88e-21 86.7
MsG0580025961.01.T01 AT5G05600 49.254 67 34 0 1 67 224 290 1.13e-20 85.9
MsG0580025961.01.T01 AT5G63600 36.220 127 79 2 1 126 185 310 2.94e-20 85.1
MsG0580025961.01.T01 AT4G21690 33.099 142 85 4 1 135 206 344 3.02e-20 85.5
MsG0580025961.01.T01 AT5G63595 43.333 90 50 1 1 90 161 249 6.08e-20 83.6
MsG0580025961.01.T01 AT2G34555 33.333 129 82 3 1 126 180 307 9.38e-20 84.0
MsG0580025961.01.T01 AT1G04380 52.174 69 32 1 1 69 198 265 1.15e-18 80.1
MsG0580025961.01.T01 AT1G30040 28.777 139 94 3 1 135 184 321 1.74e-18 80.5
MsG0580025961.01.T01 AT3G49620 39.252 107 63 2 1 106 212 317 3.44e-18 79.7
MsG0580025961.01.T01 AT1G06620 52.381 63 29 1 4 66 221 282 7.43e-18 78.2
MsG0580025961.01.T01 AT3G50210 36.036 111 66 2 1 106 104 214 9.52e-18 77.4
MsG0580025961.01.T01 AT5G59540 50.746 67 32 1 1 67 219 284 1.04e-17 77.8
MsG0580025961.01.T01 AT3G49630 35.043 117 73 3 1 116 114 228 1.13e-17 77.4
MsG0580025961.01.T01 AT3G49630 36.449 107 66 2 1 106 183 288 1.92e-17 77.4
MsG0580025961.01.T01 AT3G49630 36.449 107 66 2 1 106 187 292 2.01e-17 77.4
MsG0580025961.01.T01 AT3G50210 36.036 111 66 2 1 106 186 296 2.05e-17 77.4
MsG0580025961.01.T01 AT3G50210 36.036 111 66 2 1 106 186 296 2.05e-17 77.4
MsG0580025961.01.T01 AT3G50210 36.036 111 66 2 1 106 186 296 2.05e-17 77.4
MsG0580025961.01.T01 AT3G19000 43.478 69 36 2 1 67 202 269 2.86e-17 76.6
MsG0580025961.01.T01 AT3G55970 44.118 68 37 1 1 67 215 282 6.03e-17 75.9
MsG0580025961.01.T01 AT5G51810 47.143 70 36 1 1 70 225 293 1.57e-16 74.7
MsG0580025961.01.T01 AT5G43450 45.455 66 35 1 1 66 215 279 2.08e-16 74.3
MsG0580025961.01.T01 AT1G52820 32.824 131 85 3 3 132 173 301 2.24e-16 74.7
MsG0580025961.01.T01 AT4G22870 34.906 106 60 2 36 140 2 99 2.72e-16 70.5
MsG0580025961.01.T01 AT1G06650 43.056 72 40 1 1 72 221 291 3.35e-16 73.9
MsG0580025961.01.T01 AT4G25420 49.254 67 33 1 1 67 227 292 3.77e-16 73.6
MsG0580025961.01.T01 AT3G61400 50.769 65 30 2 4 67 225 288 6.89e-16 72.8
MsG0580025961.01.T01 AT2G30840 45.455 66 35 1 1 66 215 279 7.48e-16 73.2
MsG0580025961.01.T01 AT5G43440 45.455 66 35 1 1 66 218 282 7.56e-16 72.8
MsG0580025961.01.T01 AT3G46500 37.008 127 68 5 1 117 43 167 1.26e-15 70.5
MsG0580025961.01.T01 AT3G19010 42.857 70 37 2 1 68 197 265 2.13e-15 71.6
MsG0580025961.01.T01 AT3G46500 37.008 127 68 5 1 117 105 229 4.39e-15 70.1
MsG0580025961.01.T01 AT3G46500 37.008 127 68 5 1 117 105 229 4.39e-15 70.1
MsG0580025961.01.T01 AT1G06640 43.836 73 40 1 1 73 221 292 4.82e-15 70.9
MsG0580025961.01.T01 AT3G46500 37.008 127 68 5 1 117 179 303 6.31e-15 70.5
MsG0580025961.01.T01 AT4G23340 37.963 108 61 4 3 105 47 153 7.77e-15 68.9
MsG0580025961.01.T01 AT2G06960 33.333 132 73 5 3 134 30 146 9.28e-15 67.4
MsG0580025961.01.T01 AT4G22870 39.080 87 49 2 36 118 40 126 2.19e-14 66.6
MsG0580025961.01.T01 AT1G06640 44.776 67 36 1 1 67 221 286 2.45e-14 68.6
MsG0580025961.01.T01 AT4G23340 38.542 96 54 3 3 94 165 259 3.55e-14 68.6
MsG0580025961.01.T01 AT3G47190 33.684 95 58 3 1 94 195 285 5.58e-14 68.2
MsG0580025961.01.T01 AT4G03070 30.172 116 79 2 16 130 190 304 7.89e-13 64.7
MsG0580025961.01.T01 AT3G46500 38.776 98 52 4 1 92 74 169 1.16e-12 62.8
MsG0580025961.01.T01 AT3G46500 38.776 98 52 4 1 92 74 169 1.16e-12 62.8
MsG0580025961.01.T01 AT1G14130 30.952 126 85 1 1 124 156 281 1.35e-12 63.9
MsG0580025961.01.T01 AT5G58660 31.959 97 62 3 1 94 207 302 1.56e-12 63.9
MsG0580025961.01.T01 AT4G16765 32.500 120 74 3 17 131 77 194 1.99e-12 62.4
MsG0580025961.01.T01 AT4G16765 32.500 120 74 3 17 131 123 240 2.34e-12 62.8
MsG0580025961.01.T01 AT4G16765 32.500 120 74 3 17 131 123 240 2.34e-12 62.8
MsG0580025961.01.T01 AT4G16765 32.500 120 74 3 17 131 123 240 2.34e-12 62.8
MsG0580025961.01.T01 AT3G46500 38.776 98 52 4 1 92 105 200 3.51e-12 62.0
MsG0580025961.01.T01 AT3G46500 38.776 98 52 4 1 92 179 274 5.13e-12 62.4
MsG0580025961.01.T01 AT1G35190 33.858 127 72 5 1 117 181 305 7.13e-12 62.0
MsG0580025961.01.T01 AT3G46480 33.071 127 73 5 1 117 139 263 7.21e-12 61.6
MsG0580025961.01.T01 AT1G35190 33.858 127 72 5 1 117 158 282 7.85e-12 62.0

Find 27 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTTGTGAGAGGCTTAAT+AGG 0.286844 5:-28137555 None:intergenic
CTCCAACTCAATGAAATAGA+AGG 0.399689 5:+28137501 MsG0580025961.01.T01:CDS
GGCCTTCTATTTCATTGAGT+TGG 0.410796 5:-28137503 None:intergenic
TTGAGTCCAATGACTTTGTC+TGG 0.427085 5:-28137444 None:intergenic
TTCATTGAGTTGGAGAAGAA+TGG 0.432192 5:-28137493 None:intergenic
GGAGTAATAAGGCTTGGTAC+TGG 0.450966 5:-28138128 None:intergenic
TATTTCTCACGCCAGCTTGA+AGG 0.471903 5:+28138203 MsG0580025961.01.T01:CDS
CCTCAACCAGACAAAGTCAT+TGG 0.479363 5:+28137438 MsG0580025961.01.T01:CDS
CTAATGTCGTTGAACACTGC+AGG 0.481272 5:-28138158 None:intergenic
CCAATGACTTTGTCTGGTTG+AGG 0.496976 5:-28137438 None:intergenic
ACTTTGTCTGGTTGAGGACA+AGG 0.502854 5:-28137432 None:intergenic
AGTGTGGAAGATTTCTTCAA+AGG 0.508864 5:+28138179 MsG0580025961.01.T01:CDS
TGAGTTGGAGAAGAATGGTA+AGG 0.545815 5:-28137488 None:intergenic
ATAACAAAAGCATTTGTGAG+AGG 0.574059 5:-28137564 None:intergenic
GGACTCAATCCTCATTCTGA+TGG 0.574193 5:+28137459 MsG0580025961.01.T01:CDS
TAATGTCGTTGAACACTGCA+GGG 0.582551 5:-28138157 None:intergenic
CAATCTAGCACTGTGAAATG+TGG 0.587201 5:-28138090 None:intergenic
AGCAACAATTAACTCAGAGA+AGG 0.603268 5:+28138052 MsG0580025961.01.T01:CDS
CAATTAACTCAGAGAAGGAG+AGG 0.612359 5:+28138057 MsG0580025961.01.T01:CDS
GAGTTGGAGAAGAATGGTAA+GGG 0.618943 5:-28137487 None:intergenic
AGCACTGTGAAATGTGGCAA+TGG 0.625118 5:-28138084 None:intergenic
GTTTGACAGATAATGACGAA+TGG 0.632619 5:+28138005 MsG0580025961.01.T01:intron
AGGGCAGTACCATCAGAATG+AGG 0.647525 5:-28137468 None:intergenic
AAATGTACATTGATGACATG+AGG 0.655321 5:+28138228 MsG0580025961.01.T01:CDS
AATGTCGTTGAACACTGCAG+GGG 0.691919 5:-28138156 None:intergenic
TTGTCTGGTTGAGGACAAGG+AGG 0.705398 5:-28137429 None:intergenic
AGTGTTCAACGACATTAGTG+TGG 0.716232 5:+28138163 MsG0580025961.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCATTTAAATTTATTGT+TGG - Chr5:28137831-28137850 None:intergenic 10.0%
!! AAATAAAAAAAGATGAAATG+TGG + Chr5:28137529-28137548 MsG0580025961.01.T01:CDS 15.0%
!!! TTTCATCTTTTTTTATTTGA+AGG - Chr5:28137527-28137546 None:intergenic 15.0%
!! TACATAATATATGTAAAGTC+CGG + Chr5:28137700-28137719 MsG0580025961.01.T01:intron 20.0%
!! TTACTAAATGTAACATGAAA+AGG - Chr5:28137880-28137899 None:intergenic 20.0%
! ACATAATATATGTAAAGTCC+GGG + Chr5:28137701-28137720 MsG0580025961.01.T01:intron 25.0%
! ATTTAACCATTACGATTGAT+TGG + Chr5:28137785-28137804 MsG0580025961.01.T01:intron 25.0%
!!! AATGCTTTTGTTATCAACAT+TGG + Chr5:28137573-28137592 MsG0580025961.01.T01:CDS 25.0%
CATAATATATGTAAAGTCCG+GGG + Chr5:28137702-28137721 MsG0580025961.01.T01:intron 30.0%
! AAATGTACATTGATGACATG+AGG + Chr5:28138228-28138247 MsG0580025961.01.T01:CDS 30.0%
!! ATAACAAAAGCATTTGTGAG+AGG - Chr5:28137567-28137586 None:intergenic 30.0%
!! CTTCTGATTTTATTTCTCGA+AGG - Chr5:28137942-28137961 None:intergenic 30.0%
!!! TTCTCACCACTTTTTTTTGT+TGG - Chr5:28137746-28137765 None:intergenic 30.0%
AGCAACAATTAACTCAGAGA+AGG + Chr5:28138052-28138071 MsG0580025961.01.T01:CDS 35.0%
AGTGTGGAAGATTTCTTCAA+AGG + Chr5:28138179-28138198 MsG0580025961.01.T01:CDS 35.0%
CTCCAACTCAATGAAATAGA+AGG + Chr5:28137501-28137520 MsG0580025961.01.T01:CDS 35.0%
GTTTGACAGATAATGACGAA+TGG + Chr5:28138005-28138024 MsG0580025961.01.T01:intron 35.0%
! TGTACATTTTTCCTTCAAGC+TGG - Chr5:28138217-28138236 None:intergenic 35.0%
! TTTTGTCACCACTTCTAACA+AGG - Chr5:28137646-28137665 None:intergenic 35.0%
!! TTCATTGAGTTGGAGAAGAA+TGG - Chr5:28137496-28137515 None:intergenic 35.0%
!!! GTTTTAGGAGTAATAAGGCT+TGG - Chr5:28138137-28138156 None:intergenic 35.0%
!!! TCACCACTTTTTTTTGTTGG+TGG - Chr5:28137743-28137762 None:intergenic 35.0%
ACACTGCCAATCAATCGTAA+TGG - Chr5:28137794-28137813 None:intergenic 40.0%
AGTGTTCAACGACATTAGTG+TGG + Chr5:28138163-28138182 MsG0580025961.01.T01:CDS 40.0%
CAATCTAGCACTGTGAAATG+TGG - Chr5:28138093-28138112 None:intergenic 40.0%
CAATTAACTCAGAGAAGGAG+AGG + Chr5:28138057-28138076 MsG0580025961.01.T01:CDS 40.0%
CCACCACCAACAAAAAAAAG+TGG + Chr5:28137737-28137756 MsG0580025961.01.T01:intron 40.0%
GAGTTGGAGAAGAATGGTAA+GGG - Chr5:28137490-28137509 None:intergenic 40.0%
GCATTTGTGAGAGGCTTAAT+AGG - Chr5:28137558-28137577 None:intergenic 40.0%
GGCCTTCTATTTCATTGAGT+TGG - Chr5:28137506-28137525 None:intergenic 40.0%
TAATGTCGTTGAACACTGCA+GGG - Chr5:28138160-28138179 None:intergenic 40.0%
TTGAGTCCAATGACTTTGTC+TGG - Chr5:28137447-28137466 None:intergenic 40.0%
! TGAGTTGGAGAAGAATGGTA+AGG - Chr5:28137491-28137510 None:intergenic 40.0%
!! TTTTCGTGCCTTGTTAGAAG+TGG + Chr5:28137635-28137654 MsG0580025961.01.T01:intron 40.0%
!!! CAGGGGTTTTAGGAGTAATA+AGG - Chr5:28138142-28138161 None:intergenic 40.0%
!!! CCACTTTTTTTTGTTGGTGG+TGG - Chr5:28137740-28137759 None:intergenic 40.0%
!!! TTTTTTTTGTTGGTGGTGGC+CGG - Chr5:28137736-28137755 None:intergenic 40.0%
AATGTCGTTGAACACTGCAG+GGG - Chr5:28138159-28138178 None:intergenic 45.0%
ACTTTGTCTGGTTGAGGACA+AGG - Chr5:28137435-28137454 None:intergenic 45.0%
AGCACTGTGAAATGTGGCAA+TGG - Chr5:28138087-28138106 None:intergenic 45.0%
CCAATGACTTTGTCTGGTTG+AGG - Chr5:28137441-28137460 None:intergenic 45.0%
CCTCAACCAGACAAAGTCAT+TGG + Chr5:28137438-28137457 MsG0580025961.01.T01:CDS 45.0%
CTAATGTCGTTGAACACTGC+AGG - Chr5:28138161-28138180 None:intergenic 45.0%
GGACTCAATCCTCATTCTGA+TGG + Chr5:28137459-28137478 MsG0580025961.01.T01:CDS 45.0%
TATTTCTCACGCCAGCTTGA+AGG + Chr5:28138203-28138222 MsG0580025961.01.T01:CDS 45.0%
! GGAGTAATAAGGCTTGGTAC+TGG - Chr5:28138131-28138150 None:intergenic 45.0%
! TTGAACACTGCAGGGGTTTT+AGG - Chr5:28138152-28138171 None:intergenic 45.0%
!!! TTTTTTTGTTGGTGGTGGCC+GGG - Chr5:28137735-28137754 None:intergenic 45.0%
AGGGCAGTACCATCAGAATG+AGG - Chr5:28137471-28137490 None:intergenic 50.0%
AGTGGTGACAAAAGTCCTCG+TGG + Chr5:28137653-28137672 MsG0580025961.01.T01:intron 50.0%
GTGGTGACAAAAGTCCTCGT+GGG + Chr5:28137654-28137673 MsG0580025961.01.T01:intron 50.0%
TGGGCTTAACTCAGTTGGCA+GGG + Chr5:28137673-28137692 MsG0580025961.01.T01:intron 50.0%
TTGTCTGGTTGAGGACAAGG+AGG - Chr5:28137432-28137451 None:intergenic 50.0%
!!! TTTTTTGTTGGTGGTGGCCG+GGG - Chr5:28137734-28137753 None:intergenic 50.0%
AAAGTCCGGGGTTCAAACCC+CGG + Chr5:28137714-28137733 MsG0580025961.01.T01:intron 55.0%
CCAACTGAGTTAAGCCCACG+AGG - Chr5:28137671-28137690 None:intergenic 55.0%
CCTCGTGGGCTTAACTCAGT+TGG + Chr5:28137668-28137687 MsG0580025961.01.T01:intron 55.0%
GTGGGCTTAACTCAGTTGGC+AGG + Chr5:28137672-28137691 MsG0580025961.01.T01:intron 55.0%
GGTGGCCGGGGTTTGAACCC+CGG - Chr5:28137722-28137741 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 28137411 28138265 28137411 ID=MsG0580025961.01;Name=MsG0580025961.01
Chr5 mRNA 28137411 28138265 28137411 ID=MsG0580025961.01.T01;Parent=MsG0580025961.01;Name=MsG0580025961.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|0.5|2|0|149
Chr5 exon 28137411 28137608 28137411 ID=MsG0580025961.01.T01:exon:28924;Parent=MsG0580025961.01.T01
Chr5 exon 28138014 28138265 28138014 ID=MsG0580025961.01.T01:exon:28923;Parent=MsG0580025961.01.T01
Chr5 CDS 28137411 28137608 28137411 ID=MsG0580025961.01.T01:cds;Parent=MsG0580025961.01.T01
Chr5 CDS 28138014 28138265 28138014 ID=MsG0580025961.01.T01:cds;Parent=MsG0580025961.01.T01
Gene Sequence

>MsG0580025961.01.T01

ATGAGGATGAATTACTATCCTCCTTGTCCTCAACCAGACAAAGTCATTGGACTCAATCCTCATTCTGATGGTACTGCCCTTACCATTCTTCTCCAACTCAATGAAATAGAAGGCCTTCAAATAAAAAAAGATGAAATGTGGATTCCTATTAAGCCTCTCACAAATGCTTTTGTTATCAACATTGGAGACATGCTAGAAATAATGACGAATGGTATTTATCGAAGTATTGAACATCGAGCAACAATTAACTCAGAGAAGGAGAGGATTTCCATTGCCACATTTCACAGTGCTAGATTGAATGCAATTCTTGCTCCAGTACCAAGCCTTATTACTCCTAAAACCCCTGCAGTGTTCAACGACATTAGTGTGGAAGATTTCTTCAAAGGATATTTCTCACGCCAGCTTGAAGGAAAAATGTACATTGATGACATGAGGATGAAAAAAGAGTGA

Protein sequence

>MsG0580025961.01.T01

MRMNYYPPCPQPDKVIGLNPHSDGTALTILLQLNEIEGLQIKKDEMWIPIKPLTNAFVINIGDMLEIMTNGIYRSIEHRATINSEKERISIATFHSARLNAILAPVPSLITPKTPAVFNDISVEDFFKGYFSRQLEGKMYIDDMRMKKE*