Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017975.01.T01 | XP_003603871.1 | 92.201 | 359 | 16 | 2 | 28 | 383 | 1 | 350 | 0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017975.01.T01 | Q9LM66 | 71.131 | 336 | 83 | 4 | 53 | 383 | 30 | 356 | 1.31E-172 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017975.01.T01 | G7J6G3 | 92.201 | 359 | 16 | 2 | 28 | 383 | 1 | 350 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004803.01 | MsG0380017975.01 | 0.847652 | 1.010028e-59 | 1.807679e-56 |
| MsG0380017975.01 | MsG0580024979.01 | 0.920062 | 2.056719e-87 | 6.828552e-83 |
| MsG0380017975.01 | MsG0680031473.01 | 0.806870 | 6.668094e-50 | 3.659653e-47 |
| MsG0380017975.01 | MsG0780039437.01 | 0.863039 | 3.307771e-64 | 9.889586e-61 |
| MsG0380017975.01 | MsG0780039482.01 | 0.841097 | 5.842354e-58 | 8.492816e-55 |
| MsG0380017975.01 | MsG0880041912.01 | 0.876503 | 1.325923e-68 | 6.444824e-65 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017975.01.T01 | MTR_3g116080 | 92.201 | 359 | 16 | 2 | 28 | 383 | 1 | 350 | 0.0 | 677 |
| MsG0380017975.01.T01 | MTR_1g107550 | 50.882 | 340 | 148 | 7 | 53 | 382 | 27 | 357 | 1.17e-115 | 345 |
| MsG0380017975.01.T01 | MTR_1g018840 | 46.543 | 376 | 170 | 9 | 21 | 381 | 3 | 362 | 5.23e-111 | 332 |
| MsG0380017975.01.T01 | MTR_1g018840 | 46.543 | 376 | 170 | 9 | 21 | 381 | 3 | 362 | 5.82e-111 | 333 |
| MsG0380017975.01.T01 | MTR_4g079770 | 48.000 | 350 | 155 | 9 | 41 | 380 | 12 | 344 | 2.55e-107 | 319 |
| MsG0380017975.01.T01 | MTR_4g079800 | 49.533 | 321 | 139 | 7 | 70 | 380 | 37 | 344 | 5.17e-107 | 318 |
| MsG0380017975.01.T01 | MTR_4g047610 | 50.926 | 324 | 135 | 8 | 68 | 380 | 32 | 342 | 6.63e-107 | 318 |
| MsG0380017975.01.T01 | MTR_3g102220 | 47.383 | 363 | 165 | 9 | 36 | 382 | 11 | 363 | 7.17e-107 | 322 |
| MsG0380017975.01.T01 | MTR_4g079470 | 49.235 | 327 | 143 | 7 | 64 | 380 | 31 | 344 | 1.53e-106 | 317 |
| MsG0380017975.01.T01 | MTR_4g104370 | 48.179 | 357 | 161 | 9 | 34 | 382 | 5 | 345 | 3.35e-106 | 317 |
| MsG0380017975.01.T01 | MTR_3g075390 | 46.369 | 358 | 169 | 7 | 32 | 381 | 3 | 345 | 7.56e-106 | 316 |
| MsG0380017975.01.T01 | MTR_5g022560 | 50.938 | 320 | 133 | 8 | 72 | 380 | 37 | 343 | 1.02e-104 | 312 |
| MsG0380017975.01.T01 | MTR_4g094918 | 46.789 | 327 | 156 | 5 | 64 | 381 | 25 | 342 | 1.12e-104 | 313 |
| MsG0380017975.01.T01 | MTR_4g107930 | 49.538 | 325 | 140 | 8 | 67 | 380 | 33 | 344 | 7.34e-104 | 310 |
| MsG0380017975.01.T01 | MTR_4g080700 | 49.686 | 318 | 139 | 8 | 70 | 380 | 36 | 339 | 2.56e-100 | 301 |
| MsG0380017975.01.T01 | MTR_2g075830 | 50.155 | 323 | 136 | 8 | 68 | 380 | 33 | 340 | 9.39e-98 | 295 |
| MsG0380017975.01.T01 | MTR_4g080730 | 49.057 | 318 | 141 | 8 | 70 | 380 | 36 | 339 | 2.66e-97 | 293 |
| MsG0380017975.01.T01 | MTR_3g112430 | 48.428 | 318 | 147 | 5 | 72 | 381 | 34 | 342 | 1.67e-96 | 295 |
| MsG0380017975.01.T01 | MTR_4g079440 | 43.014 | 365 | 181 | 8 | 20 | 379 | 1 | 343 | 1.99e-95 | 289 |
| MsG0380017975.01.T01 | MTR_2g016180 | 44.759 | 353 | 173 | 8 | 40 | 382 | 17 | 357 | 4.61e-93 | 288 |
| MsG0380017975.01.T01 | MTR_2g016270 | 44.318 | 352 | 161 | 8 | 40 | 382 | 17 | 342 | 1.40e-91 | 283 |
| MsG0380017975.01.T01 | MTR_2g083930 | 44.720 | 322 | 158 | 7 | 69 | 379 | 30 | 342 | 1.25e-90 | 276 |
| MsG0380017975.01.T01 | MTR_4g080360 | 46.226 | 318 | 143 | 8 | 75 | 379 | 38 | 340 | 4.28e-88 | 270 |
| MsG0380017975.01.T01 | MTR_2g090890 | 43.590 | 312 | 159 | 5 | 74 | 381 | 39 | 337 | 2.31e-85 | 263 |
| MsG0380017975.01.T01 | MTR_7g078600 | 42.453 | 318 | 156 | 10 | 70 | 379 | 38 | 336 | 1.17e-78 | 246 |
| MsG0380017975.01.T01 | MTR_7g079230 | 41.640 | 317 | 161 | 9 | 70 | 379 | 35 | 334 | 5.90e-74 | 233 |
| MsG0380017975.01.T01 | MTR_2g015920 | 35.734 | 361 | 203 | 13 | 36 | 381 | 13 | 359 | 1.65e-68 | 221 |
| MsG0380017975.01.T01 | MTR_4g065077 | 37.027 | 370 | 207 | 13 | 24 | 381 | 2 | 357 | 2.36e-66 | 214 |
| MsG0380017975.01.T01 | MTR_2g015850 | 42.053 | 302 | 154 | 9 | 86 | 379 | 74 | 362 | 2.71e-65 | 212 |
| MsG0380017975.01.T01 | MTR_2g015930 | 36.538 | 364 | 197 | 14 | 36 | 381 | 12 | 359 | 1.08e-64 | 210 |
| MsG0380017975.01.T01 | MTR_8g086470 | 34.973 | 366 | 204 | 12 | 24 | 381 | 18 | 357 | 9.23e-60 | 197 |
| MsG0380017975.01.T01 | MTR_4g125300 | 38.339 | 313 | 172 | 11 | 74 | 380 | 51 | 348 | 1.77e-59 | 196 |
| MsG0380017975.01.T01 | MTR_4g071060 | 35.826 | 321 | 174 | 11 | 74 | 377 | 48 | 353 | 2.24e-51 | 176 |
| MsG0380017975.01.T01 | MTR_1g023210 | 35.826 | 321 | 175 | 9 | 74 | 377 | 51 | 357 | 3.45e-51 | 175 |
| MsG0380017975.01.T01 | MTR_2g067900 | 37.304 | 319 | 173 | 12 | 75 | 378 | 17 | 323 | 3.27e-50 | 172 |
| MsG0380017975.01.T01 | MTR_2g067560 | 37.695 | 321 | 163 | 12 | 74 | 372 | 16 | 321 | 1.88e-49 | 179 |
| MsG0380017975.01.T01 | MTR_2g064475 | 33.994 | 353 | 168 | 14 | 75 | 380 | 17 | 351 | 1.41e-47 | 165 |
| MsG0380017975.01.T01 | MTR_1g094135 | 33.426 | 359 | 197 | 10 | 44 | 377 | 22 | 363 | 3.86e-47 | 165 |
| MsG0380017975.01.T01 | MTR_7g078630 | 37.895 | 285 | 140 | 8 | 58 | 335 | 690 | 944 | 5.28e-46 | 169 |
| MsG0380017975.01.T01 | MTR_4g072790 | 34.615 | 364 | 166 | 15 | 34 | 377 | 6 | 317 | 9.16e-43 | 152 |
| MsG0380017975.01.T01 | MTR_1g023810 | 36.800 | 250 | 136 | 10 | 137 | 378 | 26 | 261 | 7.77e-42 | 148 |
| MsG0380017975.01.T01 | MTR_4g073660 | 33.424 | 368 | 169 | 15 | 34 | 377 | 5 | 320 | 2.48e-40 | 145 |
| MsG0380017975.01.T01 | MTR_4g072340 | 33.060 | 366 | 173 | 15 | 34 | 377 | 6 | 321 | 1.93e-39 | 143 |
| MsG0380017975.01.T01 | MTR_2g066980 | 31.498 | 327 | 160 | 14 | 75 | 380 | 35 | 318 | 3.01e-39 | 142 |
| MsG0380017975.01.T01 | MTR_2g016380 | 50.413 | 121 | 56 | 2 | 265 | 382 | 18 | 137 | 4.83e-33 | 124 |
| MsG0380017975.01.T01 | MTR_7g078580 | 56.122 | 98 | 41 | 2 | 283 | 379 | 4 | 100 | 7.29e-32 | 117 |
| MsG0380017975.01.T01 | MTR_2g015840 | 43.902 | 123 | 67 | 2 | 259 | 380 | 150 | 271 | 1.28e-29 | 115 |
| MsG0380017975.01.T01 | MTR_2g015840 | 38.281 | 128 | 71 | 5 | 70 | 190 | 29 | 155 | 7.99e-17 | 80.1 |
| MsG0380017975.01.T01 | MTR_7g079130 | 54.444 | 90 | 40 | 1 | 291 | 379 | 7 | 96 | 4.83e-28 | 106 |
| MsG0380017975.01.T01 | MTR_1g025450 | 35.294 | 187 | 85 | 8 | 159 | 338 | 55 | 212 | 2.30e-23 | 102 |
| MsG0380017975.01.T01 | MTR_7g078310 | 40.714 | 140 | 69 | 6 | 117 | 254 | 117 | 244 | 1.43e-19 | 87.8 |
| MsG0380017975.01.T01 | MTR_8g087510 | 34.615 | 130 | 79 | 4 | 206 | 333 | 23 | 148 | 3.47e-14 | 70.5 |
| MsG0380017975.01.T01 | MTR_2g047960 | 43.182 | 88 | 38 | 2 | 168 | 252 | 7 | 85 | 1.69e-12 | 63.5 |
| MsG0380017975.01.T01 | MTR_7g079260 | 44.444 | 72 | 23 | 2 | 307 | 377 | 7 | 62 | 1.19e-11 | 61.6 |
| MsG0380017975.01.T01 | MTR_7g111050 | 25.862 | 290 | 174 | 15 | 121 | 382 | 63 | 339 | 2.67e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017975.01.T01 | AT1G20850 | 71.131 | 336 | 83 | 4 | 53 | 383 | 30 | 356 | 1.33e-173 | 488 |
| MsG0380017975.01.T01 | AT4G35350 | 63.187 | 364 | 117 | 4 | 28 | 383 | 1 | 355 | 3.80e-173 | 487 |
| MsG0380017975.01.T01 | AT4G35350 | 59.727 | 293 | 101 | 4 | 28 | 312 | 1 | 284 | 8.10e-126 | 364 |
| MsG0380017975.01.T01 | AT5G43060 | 48.509 | 369 | 162 | 7 | 28 | 382 | 1 | 355 | 7.32e-113 | 337 |
| MsG0380017975.01.T01 | AT5G50260 | 49.435 | 354 | 156 | 7 | 36 | 381 | 5 | 343 | 1.95e-112 | 333 |
| MsG0380017975.01.T01 | AT1G47128 | 46.995 | 366 | 169 | 7 | 28 | 381 | 1 | 353 | 5.63e-112 | 335 |
| MsG0380017975.01.T01 | AT3G19390 | 49.292 | 353 | 158 | 8 | 35 | 381 | 9 | 346 | 1.58e-110 | 331 |
| MsG0380017975.01.T01 | AT3G48340 | 46.132 | 349 | 169 | 5 | 42 | 381 | 6 | 344 | 1.04e-102 | 308 |
| MsG0380017975.01.T01 | AT1G09850 | 48.113 | 318 | 152 | 3 | 68 | 381 | 26 | 334 | 2.35e-99 | 302 |
| MsG0380017975.01.T01 | AT5G45890 | 44.857 | 350 | 166 | 9 | 44 | 380 | 10 | 345 | 1.36e-97 | 294 |
| MsG0380017975.01.T01 | AT4G36880 | 44.578 | 332 | 160 | 6 | 65 | 381 | 40 | 362 | 2.76e-95 | 290 |
| MsG0380017975.01.T01 | AT3G19400 | 46.057 | 317 | 153 | 8 | 73 | 381 | 43 | 349 | 3.04e-92 | 281 |
| MsG0380017975.01.T01 | AT1G06260 | 46.815 | 314 | 152 | 5 | 70 | 379 | 39 | 341 | 3.95e-92 | 280 |
| MsG0380017975.01.T01 | AT4G11310 | 42.077 | 366 | 187 | 8 | 28 | 381 | 1 | 353 | 2.59e-91 | 279 |
| MsG0380017975.01.T01 | AT4G11320 | 41.644 | 365 | 190 | 8 | 28 | 381 | 8 | 360 | 9.69e-91 | 278 |
| MsG0380017975.01.T01 | AT4G11320 | 41.644 | 365 | 190 | 8 | 28 | 381 | 8 | 360 | 9.69e-91 | 278 |
| MsG0380017975.01.T01 | AT3G48350 | 42.535 | 355 | 180 | 8 | 36 | 381 | 5 | 344 | 1.23e-89 | 275 |
| MsG0380017975.01.T01 | AT4G23520 | 40.000 | 360 | 200 | 6 | 28 | 381 | 1 | 350 | 3.10e-89 | 273 |
| MsG0380017975.01.T01 | AT3G49340 | 43.750 | 320 | 157 | 8 | 71 | 379 | 32 | 339 | 2.33e-86 | 265 |
| MsG0380017975.01.T01 | AT2G27420 | 42.945 | 326 | 158 | 8 | 71 | 379 | 32 | 346 | 7.57e-84 | 259 |
| MsG0380017975.01.T01 | AT1G29090 | 43.344 | 323 | 160 | 8 | 70 | 380 | 43 | 354 | 4.29e-82 | 255 |
| MsG0380017975.01.T01 | AT2G34080 | 42.056 | 321 | 165 | 7 | 70 | 380 | 35 | 344 | 7.51e-82 | 254 |
| MsG0380017975.01.T01 | AT1G29080 | 39.489 | 352 | 187 | 11 | 42 | 380 | 7 | 345 | 3.88e-79 | 247 |
| MsG0380017975.01.T01 | AT1G29110 | 37.283 | 346 | 189 | 7 | 44 | 380 | 7 | 333 | 1.59e-78 | 245 |
| MsG0380017975.01.T01 | AT3G43960 | 41.566 | 332 | 173 | 11 | 60 | 381 | 27 | 347 | 1.79e-70 | 226 |
| MsG0380017975.01.T01 | AT5G60360 | 40.256 | 313 | 166 | 11 | 74 | 380 | 59 | 356 | 3.25e-65 | 211 |
| MsG0380017975.01.T01 | AT5G60360 | 39.936 | 313 | 166 | 12 | 74 | 380 | 59 | 355 | 1.19e-62 | 205 |
| MsG0380017975.01.T01 | AT5G60360 | 40.196 | 306 | 162 | 11 | 74 | 373 | 59 | 349 | 2.06e-62 | 204 |
| MsG0380017975.01.T01 | AT3G19400 | 44.309 | 246 | 119 | 8 | 73 | 310 | 43 | 278 | 1.16e-60 | 197 |
| MsG0380017975.01.T01 | AT3G48350 | 38.889 | 288 | 153 | 7 | 36 | 315 | 5 | 277 | 2.41e-58 | 192 |
| MsG0380017975.01.T01 | AT3G45310 | 38.339 | 313 | 172 | 11 | 74 | 380 | 59 | 356 | 3.19e-58 | 193 |
| MsG0380017975.01.T01 | AT4G39090 | 36.842 | 342 | 175 | 11 | 56 | 377 | 37 | 357 | 4.23e-58 | 193 |
| MsG0380017975.01.T01 | AT2G21430 | 37.126 | 334 | 175 | 11 | 61 | 377 | 39 | 354 | 3.94e-57 | 191 |
| MsG0380017975.01.T01 | AT3G45310 | 37.097 | 310 | 178 | 9 | 74 | 377 | 59 | 357 | 7.83e-56 | 187 |
| MsG0380017975.01.T01 | AT4G16190 | 36.615 | 325 | 169 | 10 | 74 | 377 | 55 | 363 | 9.55e-50 | 172 |
| MsG0380017975.01.T01 | AT3G54940 | 32.877 | 365 | 207 | 10 | 37 | 377 | 9 | 359 | 3.99e-48 | 167 |
| MsG0380017975.01.T01 | AT3G54940 | 30.545 | 275 | 170 | 5 | 37 | 297 | 9 | 276 | 1.33e-33 | 126 |
Find 96 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAGGTTCGAGGTCTTTA+AGG | 0.183217 | 3:+102786032 | MsG0380017975.01.T01:CDS |
| AAGGAAATTATGAAATTTAA+TGG | 0.188919 | 3:-102787530 | None:intergenic |
| ACTGATGTTGTGACTATTAA+TGG | 0.222069 | 3:+102787064 | MsG0380017975.01.T01:CDS |
| CATTGCTTCAAAGGAAAATA+TGG | 0.243961 | 3:-102787595 | None:intergenic |
| GCAGGTCAGGACAAGTGTTT+TGG | 0.258810 | 3:-102785854 | None:intergenic |
| GGAAGATTATCCTTACATTA+TGG | 0.312016 | 3:+102786907 | MsG0380017975.01.T01:CDS |
| ATCTCTGCCTGAAGCCTCTA+TGG | 0.319266 | 3:-102787158 | None:intergenic |
| ACTTGTTCTTGAACTCTTGA+TGG | 0.328420 | 3:-102786134 | None:intergenic |
| ATATGGTACATCAAAGGGTT+TGG | 0.369364 | 3:+102787346 | MsG0380017975.01.T01:CDS |
| TTATTTCTATCTTTAGCATT+TGG | 0.374681 | 3:+102785886 | MsG0380017975.01.T01:CDS |
| GCAACAATGTGTTATTGAAT+TGG | 0.378685 | 3:-102785810 | None:intergenic |
| CATTTGTAGGGTGTGTTTGA+TGG | 0.384261 | 3:+102787281 | MsG0380017975.01.T01:intron |
| AAGCACTTGCGAGATGAAAA+AGG | 0.391386 | 3:+102786934 | MsG0380017975.01.T01:CDS |
| AACATACTCCACTATAGAAC+TGG | 0.404978 | 3:-102787183 | None:intergenic |
| CATTGACCTTGATTCTTGAC+CGG | 0.416938 | 3:-102786273 | None:intergenic |
| ACATTATAGTGAAGAATTCA+TGG | 0.418831 | 3:+102787372 | MsG0380017975.01.T01:CDS |
| TTTCTCCAATCAACTGACTT+AGG | 0.421540 | 3:-102786234 | None:intergenic |
| ATAAGCATAAGGAGCAGGTC+AGG | 0.428907 | 3:-102785867 | None:intergenic |
| GGAGCAAAGTGGGGTGAGAA+AGG | 0.429527 | 3:+102787395 | MsG0380017975.01.T01:CDS |
| ATTTGCCTAAGTCAGTTGAT+TGG | 0.430861 | 3:+102786229 | MsG0380017975.01.T01:CDS |
| CTTACAACAATGGTTGCAAT+GGG | 0.434061 | 3:+102786828 | MsG0380017975.01.T01:CDS |
| GGGGTGAGAAAGGGTTTATA+AGG | 0.436382 | 3:+102787405 | MsG0380017975.01.T01:CDS |
| TAACACATTGTTGCCAATCA+TGG | 0.437681 | 3:+102785819 | MsG0380017975.01.T01:CDS |
| TTACAATAACATTGCTTCAA+AGG | 0.446603 | 3:-102787604 | None:intergenic |
| GGTGTGTCAGCCGTTGGATA+TGG | 0.454497 | 3:+102787329 | MsG0380017975.01.T01:CDS |
| AGTTCAAGAACAAGTATCTT+GGG | 0.458742 | 3:+102786142 | MsG0380017975.01.T01:CDS |
| GAACAAGTATCTTGGGCTAA+AGG | 0.462245 | 3:+102786149 | MsG0380017975.01.T01:CDS |
| GAGTTCAAGAACAAGTATCT+TGG | 0.466462 | 3:+102786141 | MsG0380017975.01.T01:CDS |
| AGAGATTTCCAGTTCTATAG+TGG | 0.466790 | 3:+102787175 | MsG0380017975.01.T01:CDS |
| GGAAAGTCTGAAGGGATTTG+TGG | 0.476760 | 3:+102787443 | MsG0380017975.01.T01:CDS |
| TCATTGAACTCTTCGAATCA+TGG | 0.479297 | 3:+102785965 | MsG0380017975.01.T01:CDS |
| GAATTCATGGGGAGCAAAGT+GGG | 0.481502 | 3:+102787385 | MsG0380017975.01.T01:CDS |
| TCCATGGACTTCAAGTCCTC+TGG | 0.486674 | 3:-102785937 | None:intergenic |
| TAATGAACAAAGCTTATTGA+AGG | 0.491336 | 3:+102787108 | MsG0380017975.01.T01:CDS |
| GAGCAAAGTGGGGTGAGAAA+GGG | 0.494121 | 3:+102787396 | MsG0380017975.01.T01:CDS |
| ATCTAAAGCACATTGATGAT+AGG | 0.494574 | 3:+102786058 | MsG0380017975.01.T01:CDS |
| GTGCTTTCCTCCATAATGTA+AGG | 0.494914 | 3:-102786917 | None:intergenic |
| TAGAAATAAGCATAAGGAGC+AGG | 0.496949 | 3:-102785872 | None:intergenic |
| ACAAGGTTGTCAGCAACTAC+TGG | 0.500291 | 3:+102786082 | MsG0380017975.01.T01:CDS |
| GAAGAGAAGAATATAAGAGA+AGG | 0.502963 | 3:-102785776 | None:intergenic |
| GTTGTCAGCAACTACTGGCT+TGG | 0.503373 | 3:+102786087 | MsG0380017975.01.T01:CDS |
| ATTGACCTTGATTCTTGACC+GGG | 0.509041 | 3:-102786272 | None:intergenic |
| TCAGTTGATTGGAGAAAGAA+AGG | 0.509647 | 3:+102786240 | MsG0380017975.01.T01:CDS |
| TAAAGATAGAAATAAGCATA+AGG | 0.512917 | 3:-102785878 | None:intergenic |
| GTTGGATATGGTACATCAAA+GGG | 0.516544 | 3:+102787341 | MsG0380017975.01.T01:CDS |
| CTATGGCCACACTGAGTGGT+TGG | 0.516563 | 3:-102787141 | None:intergenic |
| AAGAGAAGAATATAAGAGAA+GGG | 0.517194 | 3:-102785775 | None:intergenic |
| TGCATCGACTATGTGGATGC+GGG | 0.522881 | 3:-102786350 | None:intergenic |
| CGTTGGATATGGTACATCAA+AGG | 0.524173 | 3:+102787340 | MsG0380017975.01.T01:CDS |
| ATAAGGATGAAGAGAAACAT+TGG | 0.526478 | 3:+102787422 | MsG0380017975.01.T01:CDS |
| AGAAACATTGGAAAGTCTGA+AGG | 0.526996 | 3:+102787434 | MsG0380017975.01.T01:CDS |
| CATTATAGTGAAGAATTCAT+GGG | 0.532840 | 3:+102787373 | MsG0380017975.01.T01:CDS |
| ACTTACAACAATGGTTGCAA+TGG | 0.533682 | 3:+102786827 | MsG0380017975.01.T01:CDS |
| GGACGTGATTTCTCCATCGT+GGG | 0.535021 | 3:+102785907 | MsG0380017975.01.T01:CDS |
| GTGCATCGACTATGTGGATG+CGG | 0.538096 | 3:-102786351 | None:intergenic |
| TACAACAATGGTTGCAATGG+GGG | 0.543003 | 3:+102786830 | MsG0380017975.01.T01:CDS |
| ACCACTCAGTGTGGCCATAG+AGG | 0.545434 | 3:+102787144 | MsG0380017975.01.T01:CDS |
| AAAGAAAGGTGCTGTAACCC+CGG | 0.549002 | 3:+102786254 | MsG0380017975.01.T01:CDS |
| TAAAGGTTGACTTGTCTCAA+AGG | 0.550091 | 3:+102786166 | MsG0380017975.01.T01:CDS |
| GATCATGGTGTGTCAGCCGT+TGG | 0.556769 | 3:+102787323 | MsG0380017975.01.T01:CDS |
| GTAACCCCGGTCAAGAATCA+AGG | 0.557737 | 3:+102786267 | MsG0380017975.01.T01:CDS |
| AAACGGTGGACTACATAAAG+AGG | 0.559559 | 3:+102786886 | MsG0380017975.01.T01:CDS |
| AGTGTGGCCATAGAGGCTTC+AGG | 0.567247 | 3:+102787151 | MsG0380017975.01.T01:CDS |
| GAGTTCAATGAGCTTATCCA+TGG | 0.571450 | 3:-102785953 | None:intergenic |
| ACCAGAGGACTTGAAGTCCA+TGG | 0.576800 | 3:+102785936 | MsG0380017975.01.T01:CDS |
| TGGACGTGATTTCTCCATCG+TGG | 0.576917 | 3:+102785906 | MsG0380017975.01.T01:CDS |
| CATCCACATAGTCGATGCAC+TGG | 0.578901 | 3:+102786354 | MsG0380017975.01.T01:CDS |
| TGCGGAAGTGAACTAGATCA+TGG | 0.579661 | 3:+102787308 | MsG0380017975.01.T01:CDS |
| CCATTGAAGAAAAGCTACTC+AGG | 0.581738 | 3:+102786016 | MsG0380017975.01.T01:CDS |
| GAACCAGTGCATCGACTATG+TGG | 0.582767 | 3:-102786357 | None:intergenic |
| AGAAAAGCTACTCAGGTTCG+AGG | 0.582875 | 3:+102786023 | MsG0380017975.01.T01:CDS |
| AAGGAGAGAGTCCTCAGAAG+AGG | 0.591057 | 3:+102786185 | MsG0380017975.01.T01:CDS |
| CAAAGAAGAAATTAAGACAA+AGG | 0.591687 | 3:-102787549 | None:intergenic |
| AGAATTCATGGGGAGCAAAG+TGG | 0.591803 | 3:+102787384 | MsG0380017975.01.T01:CDS |
| GGATGAGAATGAATGTGCAA+AGG | 0.594385 | 3:-102785754 | None:intergenic |
| GGCCACACTGAGTGGTTGGT+TGG | 0.597846 | 3:-102787137 | None:intergenic |
| ATAAGTGAATTCCTCTTCTG+AGG | 0.598495 | 3:-102786196 | None:intergenic |
| GCAGTCGATTAATTCTTGCT+CGG | 0.604512 | 3:-102786798 | None:intergenic |
| GCCTCTATGGCCACACTGAG+TGG | 0.610194 | 3:-102787145 | None:intergenic |
| AGATTATCCTTACATTATGG+AGG | 0.615877 | 3:+102786910 | MsG0380017975.01.T01:CDS |
| GAAACATTGGAAAGTCTGAA+GGG | 0.619388 | 3:+102787435 | MsG0380017975.01.T01:CDS |
| GATTTGTGGACTCTACAAGA+TGG | 0.625513 | 3:+102787457 | MsG0380017975.01.T01:CDS |
| CTTTGATGTACCATATCCAA+CGG | 0.626421 | 3:-102787339 | None:intergenic |
| TGCGACACAACTTACAACAA+TGG | 0.635197 | 3:+102786818 | MsG0380017975.01.T01:CDS |
| GAATCATGGATGTCGAGACA+CGG | 0.654814 | 3:+102785979 | MsG0380017975.01.T01:CDS |
| GCATCGACTATGTGGATGCG+GGG | 0.656222 | 3:-102786349 | None:intergenic |
| CTCTGGTGAATAGCCCACGA+TGG | 0.663678 | 3:-102785920 | None:intergenic |
| ATTATAGTGAAGAATTCATG+GGG | 0.665269 | 3:+102787374 | MsG0380017975.01.T01:CDS |
| GCACATTGATGATAGGAACA+AGG | 0.668624 | 3:+102786065 | MsG0380017975.01.T01:CDS |
| AATTCATGGGGAGCAAAGTG+GGG | 0.670875 | 3:+102787386 | MsG0380017975.01.T01:CDS |
| TGCCAACCAACCACTCAGTG+TGG | 0.678227 | 3:+102787135 | MsG0380017975.01.T01:CDS |
| CATCGTGGGCTATTCACCAG+AGG | 0.679810 | 3:+102785921 | MsG0380017975.01.T01:CDS |
| GTCAAGAATCAAGGTCAATG+TGG | 0.700857 | 3:+102786276 | MsG0380017975.01.T01:CDS |
| TTACAACAATGGTTGCAATG+GGG | 0.703567 | 3:+102786829 | MsG0380017975.01.T01:CDS |
| TTGACCTTGATTCTTGACCG+GGG | 0.717921 | 3:-102786271 | None:intergenic |
| GGTGTGTTTGATGGACATTG+CGG | 0.757484 | 3:+102787290 | MsG0380017975.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATTATTTTTTTTTAA+TGG | + | Chr3:102787211-102787230 | MsG0380017975.01.T01:intron | 0.0% |
| !!! | ATTAATTATTTTTTTTTAAT+GGG | + | Chr3:102787212-102787231 | MsG0380017975.01.T01:intron | 0.0% |
| !! | AAGGAAATTATGAAATTTAA+TGG | - | Chr3:102787533-102787552 | None:intergenic | 15.0% |
| !! | TTATATATACTATTGGATAA+CGG | + | Chr3:102786616-102786635 | MsG0380017975.01.T01:intron | 15.0% |
| !!! | AAATCTTATTTCTTTTTAGT+GGG | - | Chr3:102787491-102787510 | None:intergenic | 15.0% |
| !!! | TAAATCTTATTTCTTTTTAG+TGG | - | Chr3:102787492-102787511 | None:intergenic | 15.0% |
| !! | ATAAGTAACATAACTTTCAT+TGG | + | Chr3:102787022-102787041 | MsG0380017975.01.T01:intron | 20.0% |
| !! | ATTATTTAACTACCATTTGT+AGG | + | Chr3:102787268-102787287 | MsG0380017975.01.T01:intron | 20.0% |
| !! | GTTCAGTTTATATATACTAT+TGG | + | Chr3:102786609-102786628 | MsG0380017975.01.T01:intron | 20.0% |
| !! | TAAAGATAGAAATAAGCATA+AGG | - | Chr3:102785881-102785900 | None:intergenic | 20.0% |
| !! | TTATTTAACTACCATTTGTA+GGG | + | Chr3:102787269-102787288 | MsG0380017975.01.T01:intron | 20.0% |
| !!! | TTATTTCTATCTTTAGCATT+TGG | + | Chr3:102785886-102785905 | MsG0380017975.01.T01:CDS | 20.0% |
| ! | AAGAGAAGAATATAAGAGAA+GGG | - | Chr3:102785778-102785797 | None:intergenic | 25.0% |
| ! | ACATTATAGTGAAGAATTCA+TGG | + | Chr3:102787372-102787391 | MsG0380017975.01.T01:CDS | 25.0% |
| ! | ATCATTGAATTGATATCAGA+CGG | - | Chr3:102786473-102786492 | None:intergenic | 25.0% |
| ! | ATTATAGTGAAGAATTCATG+GGG | + | Chr3:102787374-102787393 | MsG0380017975.01.T01:CDS | 25.0% |
| ! | CAAAGAAGAAATTAAGACAA+AGG | - | Chr3:102787552-102787571 | None:intergenic | 25.0% |
| ! | CATTATAGTGAAGAATTCAT+GGG | + | Chr3:102787373-102787392 | MsG0380017975.01.T01:CDS | 25.0% |
| ! | TAATGAACAAAGCTTATTGA+AGG | + | Chr3:102787108-102787127 | MsG0380017975.01.T01:CDS | 25.0% |
| ! | TTACAATAACATTGCTTCAA+AGG | - | Chr3:102787607-102787626 | None:intergenic | 25.0% |
| ! | TTCTCCTTCATTGTAAAAAA+CGG | + | Chr3:102786869-102786888 | MsG0380017975.01.T01:CDS | 25.0% |
| !!! | AAGCTTTGTTCATTATTTTG+TGG | - | Chr3:102787103-102787122 | None:intergenic | 25.0% |
| ACTGATGTTGTGACTATTAA+TGG | + | Chr3:102787064-102787083 | MsG0380017975.01.T01:CDS | 30.0% | |
| AGATTATCCTTACATTATGG+AGG | + | Chr3:102786910-102786929 | MsG0380017975.01.T01:CDS | 30.0% | |
| AGCGAAAAATTTGCATGATT+AGG | - | Chr3:102786553-102786572 | None:intergenic | 30.0% | |
| AGTTCAAGAACAAGTATCTT+GGG | + | Chr3:102786142-102786161 | MsG0380017975.01.T01:CDS | 30.0% | |
| ATAAGGATGAAGAGAAACAT+TGG | + | Chr3:102787422-102787441 | MsG0380017975.01.T01:CDS | 30.0% | |
| CATTGCTTCAAAGGAAAATA+TGG | - | Chr3:102787598-102787617 | None:intergenic | 30.0% | |
| GAAGAGAAGAATATAAGAGA+AGG | - | Chr3:102785779-102785798 | None:intergenic | 30.0% | |
| GAATAAACCAAATTGTGACA+GGG | + | Chr3:102786759-102786778 | MsG0380017975.01.T01:intron | 30.0% | |
| GGAAGATTATCCTTACATTA+TGG | + | Chr3:102786907-102786926 | MsG0380017975.01.T01:CDS | 30.0% | |
| TAGGCATGTTTACATATAGT+AGG | - | Chr3:102786534-102786553 | None:intergenic | 30.0% | |
| TGGGTGAATCTAATCTTAAA+TGG | + | Chr3:102787231-102787250 | MsG0380017975.01.T01:intron | 30.0% | |
| ! | ATCTAAAGCACATTGATGAT+AGG | + | Chr3:102786058-102786077 | MsG0380017975.01.T01:CDS | 30.0% |
| ! | GCAACAATGTGTTATTGAAT+TGG | - | Chr3:102785813-102785832 | None:intergenic | 30.0% |
| AACATACTCCACTATAGAAC+TGG | - | Chr3:102787186-102787205 | None:intergenic | 35.0% | |
| ACTTACAACAATGGTTGCAA+TGG | + | Chr3:102786827-102786846 | MsG0380017975.01.T01:CDS | 35.0% | |
| ACTTGTTCTTGAACTCTTGA+TGG | - | Chr3:102786137-102786156 | None:intergenic | 35.0% | |
| AGAAACATTGGAAAGTCTGA+AGG | + | Chr3:102787434-102787453 | MsG0380017975.01.T01:CDS | 35.0% | |
| AGAGATTTCCAGTTCTATAG+TGG | + | Chr3:102787175-102787194 | MsG0380017975.01.T01:CDS | 35.0% | |
| ATAAGTGAATTCCTCTTCTG+AGG | - | Chr3:102786199-102786218 | None:intergenic | 35.0% | |
| ATATGGTACATCAAAGGGTT+TGG | + | Chr3:102787346-102787365 | MsG0380017975.01.T01:CDS | 35.0% | |
| ATTTGCCTAAGTCAGTTGAT+TGG | + | Chr3:102786229-102786248 | MsG0380017975.01.T01:CDS | 35.0% | |
| CTTACAACAATGGTTGCAAT+GGG | + | Chr3:102786828-102786847 | MsG0380017975.01.T01:CDS | 35.0% | |
| CTTTGATGTACCATATCCAA+CGG | - | Chr3:102787342-102787361 | None:intergenic | 35.0% | |
| GAAACATTGGAAAGTCTGAA+GGG | + | Chr3:102787435-102787454 | MsG0380017975.01.T01:CDS | 35.0% | |
| GAGTTCAAGAACAAGTATCT+TGG | + | Chr3:102786141-102786160 | MsG0380017975.01.T01:CDS | 35.0% | |
| GGAATAAACCAAATTGTGAC+AGG | + | Chr3:102786758-102786777 | MsG0380017975.01.T01:intron | 35.0% | |
| GTTGGATATGGTACATCAAA+GGG | + | Chr3:102787341-102787360 | MsG0380017975.01.T01:CDS | 35.0% | |
| TAACACATTGTTGCCAATCA+TGG | + | Chr3:102785819-102785838 | MsG0380017975.01.T01:CDS | 35.0% | |
| TAGAAATAAGCATAAGGAGC+AGG | - | Chr3:102785875-102785894 | None:intergenic | 35.0% | |
| TCAAATTCCCTGTCACAATT+TGG | - | Chr3:102786769-102786788 | None:intergenic | 35.0% | |
| TCAGTTGATTGGAGAAAGAA+AGG | + | Chr3:102786240-102786259 | MsG0380017975.01.T01:CDS | 35.0% | |
| TCATTGAACTCTTCGAATCA+TGG | + | Chr3:102785965-102785984 | MsG0380017975.01.T01:CDS | 35.0% | |
| TCCTTCATTGTAAAAAACGG+TGG | + | Chr3:102786872-102786891 | MsG0380017975.01.T01:CDS | 35.0% | |
| TTACAACAATGGTTGCAATG+GGG | + | Chr3:102786829-102786848 | MsG0380017975.01.T01:CDS | 35.0% | |
| ! | TTTCTCCAATCAACTGACTT+AGG | - | Chr3:102786237-102786256 | None:intergenic | 35.0% |
| !! | TAAAGGTTGACTTGTCTCAA+AGG | + | Chr3:102786166-102786185 | MsG0380017975.01.T01:CDS | 35.0% |
| !! | TTTCATTGGTTTGTTTCACC+AGG | + | Chr3:102787036-102787055 | MsG0380017975.01.T01:intron | 35.0% |
| !!! | TCCACCGTTTTTTACAATGA+AGG | - | Chr3:102786876-102786895 | None:intergenic | 35.0% |
| AAGCACTTGCGAGATGAAAA+AGG | + | Chr3:102786934-102786953 | MsG0380017975.01.T01:CDS | 40.0% | |
| AGCTTGCAAGCATATTGACA+TGG | + | Chr3:102786673-102786692 | MsG0380017975.01.T01:intron | 40.0% | |
| ATTGACCTTGATTCTTGACC+GGG | - | Chr3:102786275-102786294 | None:intergenic | 40.0% | |
| CATCAAACACACCCTACAAA+TGG | - | Chr3:102787283-102787302 | None:intergenic | 40.0% | |
| CATTGACCTTGATTCTTGAC+CGG | - | Chr3:102786276-102786295 | None:intergenic | 40.0% | |
| CATTTGTAGGGTGTGTTTGA+TGG | + | Chr3:102787281-102787300 | MsG0380017975.01.T01:intron | 40.0% | |
| CCATTGAAGAAAAGCTACTC+AGG | + | Chr3:102786016-102786035 | MsG0380017975.01.T01:CDS | 40.0% | |
| CGTTGGATATGGTACATCAA+AGG | + | Chr3:102787340-102787359 | MsG0380017975.01.T01:CDS | 40.0% | |
| GAACAAGTATCTTGGGCTAA+AGG | + | Chr3:102786149-102786168 | MsG0380017975.01.T01:CDS | 40.0% | |
| GAGTTCAATGAGCTTATCCA+TGG | - | Chr3:102785956-102785975 | None:intergenic | 40.0% | |
| GATTTGTGGACTCTACAAGA+TGG | + | Chr3:102787457-102787476 | MsG0380017975.01.T01:CDS | 40.0% | |
| GCAGTCGATTAATTCTTGCT+CGG | - | Chr3:102786801-102786820 | None:intergenic | 40.0% | |
| GTCAAGAATCAAGGTCAATG+TGG | + | Chr3:102786276-102786295 | MsG0380017975.01.T01:CDS | 40.0% | |
| GTGCTTTCCTCCATAATGTA+AGG | - | Chr3:102786920-102786939 | None:intergenic | 40.0% | |
| TACAACAATGGTTGCAATGG+GGG | + | Chr3:102786830-102786849 | MsG0380017975.01.T01:CDS | 40.0% | |
| TCACAACATCAGTTACTTCC+TGG | - | Chr3:102787057-102787076 | None:intergenic | 40.0% | |
| TGCGACACAACTTACAACAA+TGG | + | Chr3:102786818-102786837 | MsG0380017975.01.T01:CDS | 40.0% | |
| TTGCAAGCATATTGACATGG+TGG | + | Chr3:102786676-102786695 | MsG0380017975.01.T01:intron | 40.0% | |
| TTGGTTTATTCCTTCAACCG+CGG | - | Chr3:102786750-102786769 | None:intergenic | 40.0% | |
| ! | CCTGAGTAGCTTTTCTTCAA+TGG | - | Chr3:102786019-102786038 | None:intergenic | 40.0% |
| ! | GCACATTGATGATAGGAACA+AGG | + | Chr3:102786065-102786084 | MsG0380017975.01.T01:CDS | 40.0% |
| !! | AAACGGTGGACTACATAAAG+AGG | + | Chr3:102786886-102786905 | MsG0380017975.01.T01:CDS | 40.0% |
| AATTCATGGGGAGCAAAGTG+GGG | + | Chr3:102787386-102787405 | MsG0380017975.01.T01:CDS | 45.0% | |
| ACAAGGTTGTCAGCAACTAC+TGG | + | Chr3:102786082-102786101 | MsG0380017975.01.T01:CDS | 45.0% | |
| ACTCAGGTTCGAGGTCTTTA+AGG | + | Chr3:102786032-102786051 | MsG0380017975.01.T01:CDS | 45.0% | |
| AGAAAAGCTACTCAGGTTCG+AGG | + | Chr3:102786023-102786042 | MsG0380017975.01.T01:CDS | 45.0% | |
| AGAATTCATGGGGAGCAAAG+TGG | + | Chr3:102787384-102787403 | MsG0380017975.01.T01:CDS | 45.0% | |
| AGTACTTGCAGGTAGTTGCT+GGG | + | Chr3:102786709-102786728 | MsG0380017975.01.T01:intron | 45.0% | |
| ATAAGCATAAGGAGCAGGTC+AGG | - | Chr3:102785870-102785889 | None:intergenic | 45.0% | |
| GAATCATGGATGTCGAGACA+CGG | + | Chr3:102785979-102785998 | MsG0380017975.01.T01:CDS | 45.0% | |
| GAATTCATGGGGAGCAAAGT+GGG | + | Chr3:102787385-102787404 | MsG0380017975.01.T01:CDS | 45.0% | |
| GGAAAGTCTGAAGGGATTTG+TGG | + | Chr3:102787443-102787462 | MsG0380017975.01.T01:CDS | 45.0% | |
| GGGGAGAAAAAAGCCATGAT+TGG | - | Chr3:102785835-102785854 | None:intergenic | 45.0% | |
| GGGGTGAGAAAGGGTTTATA+AGG | + | Chr3:102787405-102787424 | MsG0380017975.01.T01:CDS | 45.0% | |
| GTATGAACACGAGTACTTGC+AGG | + | Chr3:102786698-102786717 | MsG0380017975.01.T01:intron | 45.0% | |
| TGCGGAAGTGAACTAGATCA+TGG | + | Chr3:102787308-102787327 | MsG0380017975.01.T01:CDS | 45.0% | |
| TTGACCTTGATTCTTGACCG+GGG | - | Chr3:102786274-102786293 | None:intergenic | 45.0% | |
| ! | AGGTCAGGACAAGTGTTTTG+GGG | - | Chr3:102785855-102785874 | None:intergenic | 45.0% |
| ! | CAGGTCAGGACAAGTGTTTT+GGG | - | Chr3:102785856-102785875 | None:intergenic | 45.0% |
| ! | GGTGTGTTTGATGGACATTG+CGG | + | Chr3:102787290-102787309 | MsG0380017975.01.T01:CDS | 45.0% |
| !! | AAAGAAAGGTGCTGTAACCC+CGG | + | Chr3:102786254-102786273 | MsG0380017975.01.T01:CDS | 45.0% |
| AAGGAGAGAGTCCTCAGAAG+AGG | + | Chr3:102786185-102786204 | MsG0380017975.01.T01:CDS | 50.0% | |
| ACCAGAGGACTTGAAGTCCA+TGG | + | Chr3:102785936-102785955 | MsG0380017975.01.T01:CDS | 50.0% | |
| ATCTCTGCCTGAAGCCTCTA+TGG | - | Chr3:102787161-102787180 | None:intergenic | 50.0% | |
| CATCCACATAGTCGATGCAC+TGG | + | Chr3:102786354-102786373 | MsG0380017975.01.T01:CDS | 50.0% | |
| GAGCAAAGTGGGGTGAGAAA+GGG | + | Chr3:102787396-102787415 | MsG0380017975.01.T01:CDS | 50.0% | |
| GAGTACTTGCAGGTAGTTGC+TGG | + | Chr3:102786708-102786727 | MsG0380017975.01.T01:intron | 50.0% | |
| GGACGTGATTTCTCCATCGT+GGG | + | Chr3:102785907-102785926 | MsG0380017975.01.T01:CDS | 50.0% | |
| GTAACCCCGGTCAAGAATCA+AGG | + | Chr3:102786267-102786286 | MsG0380017975.01.T01:CDS | 50.0% | |
| TCCATGGACTTCAAGTCCTC+TGG | - | Chr3:102785940-102785959 | None:intergenic | 50.0% | |
| TGGACGTGATTTCTCCATCG+TGG | + | Chr3:102785906-102785925 | MsG0380017975.01.T01:CDS | 50.0% | |
| TGGTTGCAATGGGGGTCTAA+TGG | + | Chr3:102786838-102786857 | MsG0380017975.01.T01:CDS | 50.0% | |
| ! | GCAGGTCAGGACAAGTGTTT+TGG | - | Chr3:102785857-102785876 | None:intergenic | 50.0% |
| ! | GGCATTTTCAACTGTTGCCG+CGG | + | Chr3:102786730-102786749 | MsG0380017975.01.T01:intron | 50.0% |
| ! | GTTGTCAGCAACTACTGGCT+TGG | + | Chr3:102786087-102786106 | MsG0380017975.01.T01:CDS | 50.0% |
| !! | GAACCAGTGCATCGACTATG+TGG | - | Chr3:102786360-102786379 | None:intergenic | 50.0% |
| !! | GGTCAGGACAAGTGTTTTGG+GGG | - | Chr3:102785854-102785873 | None:intergenic | 50.0% |
| !! | GTGCATCGACTATGTGGATG+CGG | - | Chr3:102786354-102786373 | None:intergenic | 50.0% |
| !! | TGCATCGACTATGTGGATGC+GGG | - | Chr3:102786353-102786372 | None:intergenic | 50.0% |
| ACCACTCAGTGTGGCCATAG+AGG | + | Chr3:102787144-102787163 | MsG0380017975.01.T01:CDS | 55.0% | |
| AGTGTGGCCATAGAGGCTTC+AGG | + | Chr3:102787151-102787170 | MsG0380017975.01.T01:CDS | 55.0% | |
| CTATGGCCACACTGAGTGGT+TGG | - | Chr3:102787144-102787163 | None:intergenic | 55.0% | |
| CTCTGGTGAATAGCCCACGA+TGG | - | Chr3:102785923-102785942 | None:intergenic | 55.0% | |
| GATCATGGTGTGTCAGCCGT+TGG | + | Chr3:102787323-102787342 | MsG0380017975.01.T01:CDS | 55.0% | |
| GGAGCAAAGTGGGGTGAGAA+AGG | + | Chr3:102787395-102787414 | MsG0380017975.01.T01:CDS | 55.0% | |
| GGTGTGTCAGCCGTTGGATA+TGG | + | Chr3:102787329-102787348 | MsG0380017975.01.T01:CDS | 55.0% | |
| TCAACTGTTGCCGCGGTTGA+AGG | + | Chr3:102786737-102786756 | MsG0380017975.01.T01:intron | 55.0% | |
| TGCCAACCAACCACTCAGTG+TGG | + | Chr3:102787135-102787154 | MsG0380017975.01.T01:CDS | 55.0% | |
| ! | CATCGTGGGCTATTCACCAG+AGG | + | Chr3:102785921-102785940 | MsG0380017975.01.T01:CDS | 55.0% |
| !! | GCATCGACTATGTGGATGCG+GGG | - | Chr3:102786352-102786371 | None:intergenic | 55.0% |
| GCCTCTATGGCCACACTGAG+TGG | - | Chr3:102787148-102787167 | None:intergenic | 60.0% | |
| GGCCACACTGAGTGGTTGGT+TGG | - | Chr3:102787140-102787159 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 102785757 | 102787675 | 102785757 | ID=MsG0380017975.01;Name=MsG0380017975.01 |
| Chr3 | mRNA | 102785757 | 102787675 | 102785757 | ID=MsG0380017975.01.T01;Parent=MsG0380017975.01;Name=MsG0380017975.01.T01;_AED=0.42;_eAED=0.44;_QI=0|0.66|0.5|1|1|1|4|170|383 |
| Chr3 | exon | 102785757 | 102786375 | 102785757 | ID=MsG0380017975.01.T01:exon:18299;Parent=MsG0380017975.01.T01 |
| Chr3 | exon | 102786780 | 102786955 | 102786780 | ID=MsG0380017975.01.T01:exon:18300;Parent=MsG0380017975.01.T01 |
| Chr3 | exon | 102787058 | 102787198 | 102787058 | ID=MsG0380017975.01.T01:exon:18301;Parent=MsG0380017975.01.T01 |
| Chr3 | exon | 102787290 | 102787675 | 102787290 | ID=MsG0380017975.01.T01:exon:18302;Parent=MsG0380017975.01.T01 |
| Chr3 | CDS | 102785757 | 102786375 | 102785757 | ID=MsG0380017975.01.T01:cds;Parent=MsG0380017975.01.T01 |
| Chr3 | CDS | 102786780 | 102786955 | 102786780 | ID=MsG0380017975.01.T01:cds;Parent=MsG0380017975.01.T01 |
| Chr3 | CDS | 102787058 | 102787198 | 102787058 | ID=MsG0380017975.01.T01:cds;Parent=MsG0380017975.01.T01 |
| Chr3 | CDS | 102787290 | 102787505 | 102787290 | ID=MsG0380017975.01.T01:cds;Parent=MsG0380017975.01.T01 |
| Chr3 | three_prime_UTR | 102787506 | 102787675 | 102787506 | ID=MsG0380017975.01.T01:three_prime_utr;Parent=MsG0380017975.01.T01 |
| Gene Sequence |
| Protein sequence |
