Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042677.01.T01 | KEH18437.1 | 91.398 | 186 | 16 | 0 | 47 | 232 | 1 | 186 | 3.26E-112 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042677.01.T01 | A0A072TM10 | 91.398 | 186 | 16 | 0 | 47 | 232 | 1 | 186 | 1.56e-112 | 329 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000655.01 | MsG0880042677.01 | 0.821394 | 4.132751e-53 | 3.358193e-50 |
| MsG0180000942.01 | MsG0880042677.01 | 0.823955 | 1.048250e-53 | 9.158985e-51 |
| MsG0180000976.01 | MsG0880042677.01 | 0.818545 | 1.853591e-52 | 1.391634e-49 |
| MsG0180001591.01 | MsG0880042677.01 | 0.813522 | 2.452750e-51 | 1.605443e-48 |
| MsG0180004106.01 | MsG0880042677.01 | 0.814728 | 1.328949e-51 | 8.987299e-49 |
| MsG0280006400.01 | MsG0880042677.01 | 0.800905 | 1.157303e-48 | 5.453285e-46 |
| MsG0780041129.01 | MsG0880042677.01 | 0.837669 | 4.536169e-57 | 5.935350e-54 |
| MsG0880042084.01 | MsG0880042677.01 | 0.804600 | 1.998179e-49 | 1.034582e-46 |
| MsG0880042415.01 | MsG0880042677.01 | 0.823509 | 1.332926e-53 | 1.150025e-50 |
| MsG0880042677.01 | MsG0880044619.01 | 0.803152 | 3.994991e-49 | 1.992921e-46 |
| MsG0880042677.01 | MsG0880044620.01 | 0.804129 | 2.504635e-49 | 1.281185e-46 |
| MsG0880042677.01 | MsG0880044625.01 | 0.808884 | 2.487362e-50 | 1.438860e-47 |
| MsG0880042677.01 | MsG0880044626.01 | 0.824606 | 7.369519e-54 | 6.560221e-51 |
| MsG0880042677.01 | MsG0880044629.01 | 0.840418 | 8.799123e-58 | 1.252633e-54 |
| MsG0880042677.01 | MsG0880045423.01 | 0.803298 | 3.726589e-49 | 1.865925e-46 |
| MsG0380011883.01 | MsG0880042677.01 | 0.819506 | 1.120498e-52 | 8.639232e-50 |
| MsG0380013813.01 | MsG0880042677.01 | 0.821046 | 4.971130e-53 | 4.000904e-50 |
| MsG0380014510.01 | MsG0880042677.01 | 0.815400 | 9.428015e-52 | 6.493285e-49 |
| MsG0380014794.01 | MsG0880042677.01 | 0.808941 | 2.417940e-50 | 1.400859e-47 |
| MsG0680031996.01 | MsG0880042677.01 | 0.819116 | 1.374879e-52 | 1.048617e-49 |
| MsG0680032002.01 | MsG0880042677.01 | 0.802171 | 6.365909e-49 | 3.097222e-46 |
| MsG0480020433.01 | MsG0880042677.01 | 0.830617 | 2.655195e-55 | 2.812146e-52 |
| MsG0480020904.01 | MsG0880042677.01 | -0.803275 | 3.768689e-49 | 1.885891e-46 |
| MsG0580025226.01 | MsG0880042677.01 | 0.812148 | 4.905820e-51 | 3.094935e-48 |
| MsG0580028422.01 | MsG0880042677.01 | 0.810603 | 1.062017e-50 | 6.429909e-48 |
| MsG0280009644.01 | MsG0880042677.01 | -0.843769 | 1.142547e-58 | 1.806238e-55 |
| MsG0280010253.01 | MsG0880042677.01 | 0.816836 | 4.502957e-52 | 3.225737e-49 |
| MsG0780036182.01 | MsG0880042677.01 | 0.813748 | 2.187862e-51 | 1.440773e-48 |
| MsG0780036509.01 | MsG0880042677.01 | 0.812164 | 4.864409e-51 | 3.070172e-48 |
| MsG0780036613.01 | MsG0880042677.01 | 0.836222 | 1.061858e-56 | 1.329743e-53 |
| MsG0780036620.01 | MsG0880042677.01 | 0.831665 | 1.467655e-55 | 1.603467e-52 |
| MsG0780037351.01 | MsG0880042677.01 | 0.818730 | 1.682887e-52 | 1.269871e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042677.01.T01 | MTR_8g019440 | 91.398 | 186 | 16 | 0 | 47 | 232 | 1 | 186 | 3.95e-116 | 329 |
| MsG0880042677.01.T01 | MTR_8g019060 | 67.123 | 219 | 71 | 1 | 1 | 219 | 44 | 261 | 9.61e-92 | 277 |
| MsG0880042677.01.T01 | MTR_8g019060 | 68.817 | 186 | 55 | 3 | 26 | 209 | 259 | 443 | 3.72e-73 | 229 |
| MsG0880042677.01.T01 | MTR_8g019450 | 50.206 | 243 | 101 | 3 | 1 | 226 | 1 | 240 | 3.82e-76 | 230 |
| MsG0880042677.01.T01 | MTR_8g018980 | 48.548 | 241 | 106 | 2 | 1 | 224 | 1 | 240 | 3.61e-71 | 218 |
| MsG0880042677.01.T01 | MTR_0470s0020 | 47.303 | 241 | 109 | 2 | 1 | 224 | 1 | 240 | 1.38e-70 | 216 |
| MsG0880042677.01.T01 | MTR_8g019050 | 47.303 | 241 | 109 | 2 | 1 | 224 | 1 | 240 | 1.38e-70 | 216 |
| MsG0880042677.01.T01 | MTR_0514s0010 | 48.133 | 241 | 107 | 3 | 1 | 224 | 3 | 242 | 5.29e-70 | 215 |
| MsG0880042677.01.T01 | MTR_8g019370 | 69.811 | 159 | 46 | 2 | 65 | 222 | 1 | 158 | 1.43e-67 | 206 |
| MsG0880042677.01.T01 | MTR_8g019380 | 46.444 | 239 | 114 | 5 | 1 | 226 | 1 | 238 | 9.59e-63 | 197 |
| MsG0880042677.01.T01 | MTR_8g019260 | 47.183 | 142 | 68 | 2 | 38 | 179 | 8 | 142 | 4.72e-37 | 128 |
| MsG0880042677.01.T01 | MTR_8g019110 | 47.183 | 142 | 68 | 2 | 38 | 179 | 8 | 142 | 4.72e-37 | 128 |
| MsG0880042677.01.T01 | MTR_8g019290 | 45.775 | 142 | 70 | 2 | 38 | 179 | 8 | 142 | 8.56e-36 | 125 |
| MsG0880042677.01.T01 | MTR_7g055630 | 46.043 | 139 | 67 | 3 | 42 | 177 | 13 | 146 | 4.72e-32 | 115 |
| MsG0880042677.01.T01 | MTR_0470s0010 | 43.571 | 140 | 78 | 1 | 38 | 177 | 10 | 148 | 9.01e-31 | 112 |
| MsG0880042677.01.T01 | MTR_8g019020 | 43.571 | 140 | 78 | 1 | 38 | 177 | 10 | 148 | 9.01e-31 | 112 |
| MsG0880042677.01.T01 | MTR_8g019280 | 48.305 | 118 | 54 | 2 | 62 | 179 | 2 | 112 | 2.81e-27 | 102 |
| MsG0880042677.01.T01 | MTR_1g069110 | 31.884 | 207 | 124 | 5 | 6 | 209 | 242 | 434 | 2.71e-22 | 94.7 |
| MsG0880042677.01.T01 | MTR_7g099570 | 34.682 | 173 | 103 | 4 | 39 | 209 | 424 | 588 | 2.65e-20 | 89.4 |
| MsG0880042677.01.T01 | MTR_7g087540 | 34.356 | 163 | 92 | 4 | 37 | 197 | 26 | 175 | 2.84e-19 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042677.01.T01 | AT3G13950 | 27.841 | 176 | 107 | 5 | 38 | 207 | 24 | 185 | 3.10e-14 | 69.3 |
Find 52 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACACTGCGTATTATTATT+TGG | 0.053800 | 8:+12478227 | MsG0880042677.01.T01:CDS |
| TTTCAACATTGCTTCGTATT+TGG | 0.140918 | 8:+12478173 | MsG0880042677.01.T01:CDS |
| CACACTGCGTATTATTATTT+GGG | 0.201281 | 8:+12478228 | MsG0880042677.01.T01:CDS |
| TTACCGAATAGCAATATTAA+TGG | 0.237697 | 8:+12478111 | MsG0880042677.01.T01:CDS |
| AGGAAGTGAGAATAGTATTC+AGG | 0.264992 | 8:-12477950 | None:intergenic |
| TGGTTACCCCAGATCCTGTC+TGG | 0.315673 | 8:+12478131 | MsG0880042677.01.T01:CDS |
| AGCTTTCTCCAACCTTTCTT+TGG | 0.316627 | 8:-12477680 | None:intergenic |
| ACCTTTCTTTGGTTCGTCAT+TGG | 0.323590 | 8:-12477669 | None:intergenic |
| TTATCTCCATCGTCTTTAAT+AGG | 0.335574 | 8:-12477845 | None:intergenic |
| GTGGAATTCGTTTGAGTCAT+AGG | 0.336965 | 8:+12478029 | MsG0880042677.01.T01:CDS |
| AGCATGTTCTAAAGGTTATA+AGG | 0.340199 | 8:+12477883 | MsG0880042677.01.T01:CDS |
| TTCTTTGGTTCGTCATTGGT+TGG | 0.355017 | 8:-12477665 | None:intergenic |
| TCTTTGGTTCGTCATTGGTT+GGG | 0.357553 | 8:-12477664 | None:intergenic |
| TTATCACCCCAGACAGGATC+TGG | 0.370204 | 8:-12478139 | None:intergenic |
| TAACCATTAATATTGCTATT+CGG | 0.415211 | 8:-12478114 | None:intergenic |
| CTTTGGTTCGTCATTGGTTG+GGG | 0.416447 | 8:-12477663 | None:intergenic |
| AACATATTGTGTTCCAGAAA+AGG | 0.437742 | 8:-12477970 | None:intergenic |
| ACATTGCTTCGTATTTGGAT+TGG | 0.451577 | 8:+12478178 | MsG0880042677.01.T01:CDS |
| GGAAGTGAGAATAGTATTCA+GGG | 0.452495 | 8:-12477949 | None:intergenic |
| CAAGCCGATGCAATCATCAT+TGG | 0.452634 | 8:-12478298 | None:intergenic |
| AGCAACAATAACGTTTCAAA+TGG | 0.467865 | 8:+12477796 | MsG0880042677.01.T01:CDS |
| TAAGGACTTGAAGCTATGTC+CGG | 0.473893 | 8:+12477901 | MsG0880042677.01.T01:CDS |
| TAAATCCACCCGGTGGCGTT+AGG | 0.490777 | 8:+12477822 | MsG0880042677.01.T01:CDS |
| AATAATACAGCATGTTCTAA+AGG | 0.504058 | 8:+12477875 | MsG0880042677.01.T01:CDS |
| GGTTACCCCAGATCCTGTCT+GGG | 0.508011 | 8:+12478132 | MsG0880042677.01.T01:CDS |
| AACAATCAAGTGGATAATCA+TGG | 0.516221 | 8:+12477626 | MsG0880042677.01.T01:CDS |
| TCCTGTCTGGGGTGATAATG+AGG | 0.519092 | 8:+12478144 | MsG0880042677.01.T01:CDS |
| TGAGTCATAGGTTTAGTATG+TGG | 0.529830 | 8:+12478041 | MsG0880042677.01.T01:CDS |
| CGAAAACAAGAATGAGTGGT+TGG | 0.531380 | 8:+12477733 | MsG0880042677.01.T01:CDS |
| TTTAATAGGCCTAACGCCAC+CGG | 0.537214 | 8:-12477831 | None:intergenic |
| ACACTGCGTATTATTATTTG+GGG | 0.542002 | 8:+12478229 | MsG0880042677.01.T01:CDS |
| ACCAATGACGAACCAAAGAA+AGG | 0.542566 | 8:+12477668 | MsG0880042677.01.T01:CDS |
| TATCACCCCAGACAGGATCT+GGG | 0.544206 | 8:-12478138 | None:intergenic |
| ATGACGAACCAAAGAAAGGT+TGG | 0.557249 | 8:+12477672 | MsG0880042677.01.T01:CDS |
| CACTCCAATGATGATTGCAT+CGG | 0.588109 | 8:+12478294 | MsG0880042677.01.T01:CDS |
| ACCTCATTATCACCCCAGAC+AGG | 0.593150 | 8:-12478145 | None:intergenic |
| AAGGACTTGAAGCTATGTCC+GGG | 0.593407 | 8:+12477902 | MsG0880042677.01.T01:CDS |
| TTAATAGGCCTAACGCCACC+GGG | 0.595486 | 8:-12477830 | None:intergenic |
| TGTGAGTAACAAACCCGAGA+AGG | 0.604751 | 8:-12478209 | None:intergenic |
| GAGTGGTTGGATCAAATGAG+AGG | 0.610628 | 8:+12477746 | MsG0880042677.01.T01:CDS |
| ATGGCTAAGACAGCATTACC+CGG | 0.613591 | 8:-12477920 | None:intergenic |
| ACAGACAATGAACAATCAAG+TGG | 0.632140 | 8:+12477616 | None:intergenic |
| CGATGCAATCATCATTGGAG+TGG | 0.636920 | 8:-12478293 | None:intergenic |
| AGTGGTTGGATCAAATGAGA+GGG | 0.637995 | 8:+12477747 | MsG0880042677.01.T01:CDS |
| CATACGAAAACAAGAATGAG+TGG | 0.644319 | 8:+12477729 | MsG0880042677.01.T01:CDS |
| CAAATGGCTATAAATCCACC+CGG | 0.647825 | 8:+12477812 | MsG0880042677.01.T01:CDS |
| ATCACCCCAGACAGGATCTG+GGG | 0.669371 | 8:-12478137 | None:intergenic |
| ATAGTATTCAGGGTATACAA+TGG | 0.671783 | 8:-12477939 | None:intergenic |
| GTTAGGCCTATTAAAGACGA+TGG | 0.688519 | 8:+12477839 | MsG0880042677.01.T01:CDS |
| ATAGGCCTAACGCCACCGGG+TGG | 0.692695 | 8:-12477827 | None:intergenic |
| GTTACCCCAGATCCTGTCTG+GGG | 0.708353 | 8:+12478133 | MsG0880042677.01.T01:CDS |
| ATGGCTATAAATCCACCCGG+TGG | 0.752819 | 8:+12477815 | MsG0880042677.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATGATTTCCTCAAAAA+AGG | + | Chr8:12478253-12478272 | MsG0880042677.01.T01:CDS | 20.0% |
| !!! | TAACCATTAATATTGCTATT+CGG | - | Chr8:12478117-12478136 | None:intergenic | 20.0% |
| ! | AATAATACAGCATGTTCTAA+AGG | + | Chr8:12477875-12477894 | MsG0880042677.01.T01:CDS | 25.0% |
| ! | CAAAAAAGGTGAATGTAAAA+AGG | + | Chr8:12478267-12478286 | MsG0880042677.01.T01:CDS | 25.0% |
| ! | TTACCGAATAGCAATATTAA+TGG | + | Chr8:12478111-12478130 | MsG0880042677.01.T01:CDS | 25.0% |
| !!! | TTTTACATTCACCTTTTTTG+AGG | - | Chr8:12478267-12478286 | None:intergenic | 25.0% |
| !!! | TTTTAGAACTAGTAGTGAAT+TGG | + | Chr8:12477702-12477721 | MsG0880042677.01.T01:CDS | 25.0% |
| AACAATCAAGTGGATAATCA+TGG | + | Chr8:12477626-12477645 | MsG0880042677.01.T01:CDS | 30.0% | |
| AACATATTGTGTTCCAGAAA+AGG | - | Chr8:12477973-12477992 | None:intergenic | 30.0% | |
| ACACTGCGTATTATTATTTG+GGG | + | Chr8:12478229-12478248 | MsG0880042677.01.T01:CDS | 30.0% | |
| AGCAACAATAACGTTTCAAA+TGG | + | Chr8:12477796-12477815 | MsG0880042677.01.T01:CDS | 30.0% | |
| ATAGTATTCAGGGTATACAA+TGG | - | Chr8:12477942-12477961 | None:intergenic | 30.0% | |
| CACACTGCGTATTATTATTT+GGG | + | Chr8:12478228-12478247 | MsG0880042677.01.T01:CDS | 30.0% | |
| TCACACTGCGTATTATTATT+TGG | + | Chr8:12478227-12478246 | MsG0880042677.01.T01:CDS | 30.0% | |
| TTATCTCCATCGTCTTTAAT+AGG | - | Chr8:12477848-12477867 | None:intergenic | 30.0% | |
| TTTCAACATTGCTTCGTATT+TGG | + | Chr8:12478173-12478192 | MsG0880042677.01.T01:CDS | 30.0% | |
| !! | AGCATGTTCTAAAGGTTATA+AGG | + | Chr8:12477883-12477902 | MsG0880042677.01.T01:CDS | 30.0% |
| ACATTGCTTCGTATTTGGAT+TGG | + | Chr8:12478178-12478197 | MsG0880042677.01.T01:CDS | 35.0% | |
| AGGAAGTGAGAATAGTATTC+AGG | - | Chr8:12477953-12477972 | None:intergenic | 35.0% | |
| CATACGAAAACAAGAATGAG+TGG | + | Chr8:12477729-12477748 | MsG0880042677.01.T01:CDS | 35.0% | |
| GGAAGTGAGAATAGTATTCA+GGG | - | Chr8:12477952-12477971 | None:intergenic | 35.0% | |
| TGAGTCATAGGTTTAGTATG+TGG | + | Chr8:12478041-12478060 | MsG0880042677.01.T01:CDS | 35.0% | |
| ! | ACTATTCTCACTTCCTTTTC+TGG | + | Chr8:12477957-12477976 | MsG0880042677.01.T01:CDS | 35.0% |
| ! | ATTGGATTGTTTTCCTTCTC+GGG | + | Chr8:12478196-12478215 | MsG0880042677.01.T01:CDS | 35.0% |
| ! | GATTGGATTGTTTTCCTTCT+CGG | + | Chr8:12478195-12478214 | MsG0880042677.01.T01:CDS | 35.0% |
| ! | GTTTTACTCTTGCTTATGAG+TGG | + | Chr8:12478010-12478029 | MsG0880042677.01.T01:CDS | 35.0% |
| !!! | AGTATGTGGCTTTTTTCGAT+AGG | + | Chr8:12478055-12478074 | MsG0880042677.01.T01:CDS | 35.0% |
| !!! | GTATGTGGCTTTTTTCGATA+GGG | + | Chr8:12478056-12478075 | MsG0880042677.01.T01:CDS | 35.0% |
| ACCAATGACGAACCAAAGAA+AGG | + | Chr8:12477668-12477687 | MsG0880042677.01.T01:CDS | 40.0% | |
| AGCTTTCTCCAACCTTTCTT+TGG | - | Chr8:12477683-12477702 | None:intergenic | 40.0% | |
| AGTGGTTGGATCAAATGAGA+GGG | + | Chr8:12477747-12477766 | MsG0880042677.01.T01:CDS | 40.0% | |
| ATGACGAACCAAAGAAAGGT+TGG | + | Chr8:12477672-12477691 | MsG0880042677.01.T01:CDS | 40.0% | |
| CAAATGGCTATAAATCCACC+CGG | + | Chr8:12477812-12477831 | MsG0880042677.01.T01:CDS | 40.0% | |
| CACTCCAATGATGATTGCAT+CGG | + | Chr8:12478294-12478313 | MsG0880042677.01.T01:CDS | 40.0% | |
| CGAAAACAAGAATGAGTGGT+TGG | + | Chr8:12477733-12477752 | MsG0880042677.01.T01:CDS | 40.0% | |
| GTGGAATTCGTTTGAGTCAT+AGG | + | Chr8:12478029-12478048 | MsG0880042677.01.T01:CDS | 40.0% | |
| GTTAGGCCTATTAAAGACGA+TGG | + | Chr8:12477839-12477858 | MsG0880042677.01.T01:CDS | 40.0% | |
| TAAGGACTTGAAGCTATGTC+CGG | + | Chr8:12477901-12477920 | MsG0880042677.01.T01:CDS | 40.0% | |
| ! | ACCTTTCTTTGGTTCGTCAT+TGG | - | Chr8:12477672-12477691 | None:intergenic | 40.0% |
| ! | TCTTTGGTTCGTCATTGGTT+GGG | - | Chr8:12477667-12477686 | None:intergenic | 40.0% |
| ! | TTCTTTGGTTCGTCATTGGT+TGG | - | Chr8:12477668-12477687 | None:intergenic | 40.0% |
| AAGGACTTGAAGCTATGTCC+GGG | + | Chr8:12477902-12477921 | MsG0880042677.01.T01:CDS | 45.0% | |
| ATGGCTAAGACAGCATTACC+CGG | - | Chr8:12477923-12477942 | None:intergenic | 45.0% | |
| CAAGCCGATGCAATCATCAT+TGG | - | Chr8:12478301-12478320 | None:intergenic | 45.0% | |
| CGATGCAATCATCATTGGAG+TGG | - | Chr8:12478296-12478315 | None:intergenic | 45.0% | |
| GAGTGGTTGGATCAAATGAG+AGG | + | Chr8:12477746-12477765 | MsG0880042677.01.T01:CDS | 45.0% | |
| TGTGAGTAACAAACCCGAGA+AGG | - | Chr8:12478212-12478231 | None:intergenic | 45.0% | |
| TTTAATAGGCCTAACGCCAC+CGG | - | Chr8:12477834-12477853 | None:intergenic | 45.0% | |
| ! | CTTTGGTTCGTCATTGGTTG+GGG | - | Chr8:12477666-12477685 | None:intergenic | 45.0% |
| ACCTCATTATCACCCCAGAC+AGG | - | Chr8:12478148-12478167 | None:intergenic | 50.0% | |
| ATGGCTATAAATCCACCCGG+TGG | + | Chr8:12477815-12477834 | MsG0880042677.01.T01:CDS | 50.0% | |
| TATCACCCCAGACAGGATCT+GGG | - | Chr8:12478141-12478160 | None:intergenic | 50.0% | |
| TTAATAGGCCTAACGCCACC+GGG | - | Chr8:12477833-12477852 | None:intergenic | 50.0% | |
| TTATCACCCCAGACAGGATC+TGG | - | Chr8:12478142-12478161 | None:intergenic | 50.0% | |
| ! | TCCTGTCTGGGGTGATAATG+AGG | + | Chr8:12478144-12478163 | MsG0880042677.01.T01:CDS | 50.0% |
| ATCACCCCAGACAGGATCTG+GGG | - | Chr8:12478140-12478159 | None:intergenic | 55.0% | |
| GGTTACCCCAGATCCTGTCT+GGG | + | Chr8:12478132-12478151 | MsG0880042677.01.T01:CDS | 55.0% | |
| GTTACCCCAGATCCTGTCTG+GGG | + | Chr8:12478133-12478152 | MsG0880042677.01.T01:CDS | 55.0% | |
| TAAATCCACCCGGTGGCGTT+AGG | + | Chr8:12477822-12477841 | MsG0880042677.01.T01:CDS | 55.0% | |
| TGGTTACCCCAGATCCTGTC+TGG | + | Chr8:12478131-12478150 | MsG0880042677.01.T01:CDS | 55.0% | |
| ATAGGCCTAACGCCACCGGG+TGG | - | Chr8:12477830-12477849 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 12477623 | 12478321 | 12477623 | ID=MsG0880042677.01;Name=MsG0880042677.01 |
| Chr8 | mRNA | 12477623 | 12478321 | 12477623 | ID=MsG0880042677.01.T01;Parent=MsG0880042677.01;Name=MsG0880042677.01.T01;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|232 |
| Chr8 | exon | 12477623 | 12478321 | 12477623 | ID=MsG0880042677.01.T01:exon:242;Parent=MsG0880042677.01.T01 |
| Chr8 | CDS | 12477623 | 12478321 | 12477623 | ID=MsG0880042677.01.T01:cds;Parent=MsG0880042677.01.T01 |
| Gene Sequence |
| Protein sequence |
