AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042415.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042415.01.T01 MTR_8g011430 97.317 410 11 0 205 614 12 421 0.0 828
MsG0880042415.01.T01 MTR_8g011430 44.444 207 81 6 16 190 27 231 2.05e-34 136
MsG0880042415.01.T01 MTR_8g011370 78.481 395 80 2 221 614 23 413 0.0 649
MsG0880042415.01.T01 MTR_8g011370 48.000 150 45 5 35 155 44 189 2.08e-24 108
MsG0880042415.01.T01 MTR_8g011410 78.228 395 81 2 221 614 23 413 0.0 642
MsG0880042415.01.T01 MTR_8g011410 46.000 150 48 5 35 155 44 189 3.60e-22 102
MsG0880042415.01.T01 MTR_8g011377 66.076 395 75 3 220 614 257 592 1.47e-174 510
MsG0880042415.01.T01 MTR_8g011377 56.371 259 65 3 356 614 14 224 7.49e-85 278
MsG0880042415.01.T01 MTR_8g011440 71.268 355 91 5 240 591 828 1174 1.35e-161 494
MsG0880042415.01.T01 MTR_8g011440 65.473 391 111 5 221 604 39 412 3.61e-160 490
MsG0880042415.01.T01 MTR_8g011440 53.548 155 42 5 31 155 826 980 2.45e-29 124
MsG0880042415.01.T01 MTR_8g011440 52.577 97 39 1 66 155 96 192 4.75e-19 92.4
MsG0880042415.01.T01 MTR_2g067990 43.951 405 222 5 212 613 223 625 9.93e-110 353
MsG0880042415.01.T01 MTR_2g067980 44.730 389 210 5 227 613 261 646 4.87e-107 347
MsG0880042415.01.T01 MTR_2g067980 33.846 130 60 3 52 155 293 422 2.83e-11 67.4
MsG0880042415.01.T01 MTR_5g013130 42.636 387 198 11 244 614 40 418 9.67e-97 314
MsG0880042415.01.T01 MTR_5g013070 40.806 397 210 12 234 614 32 419 2.84e-91 299
MsG0880042415.01.T01 MTR_2g068650 40.409 391 173 8 226 613 30 363 3.91e-88 290
MsG0880042415.01.T01 MTR_2g067970 43.077 325 173 8 226 540 196 518 5.34e-76 260
MsG0880042415.01.T01 MTR_5g006160 32.161 398 232 18 227 614 24 393 7.50e-41 159
MsG0880042415.01.T01 MTR_4g114270 32.808 381 226 15 244 612 54 416 8.40e-41 159
MsG0880042415.01.T01 MTR_4g114250 30.549 419 249 17 213 612 22 417 1.09e-38 152
MsG0880042415.01.T01 MTR_4g114240 30.713 407 242 17 227 612 37 424 6.91e-32 132
MsG0880042415.01.T01 MTR_1g104555 27.487 382 197 13 244 614 13 325 5.57e-30 125
MsG0880042415.01.T01 MTR_3g031490 27.586 377 244 9 232 600 24 379 7.35e-30 125
MsG0880042415.01.T01 MTR_3g031600 29.708 377 239 10 232 601 24 381 9.73e-30 125
MsG0880042415.01.T01 MTR_3g102400 27.368 380 249 12 230 601 29 389 2.12e-28 121
MsG0880042415.01.T01 MTR_3g031640 28.760 379 240 10 232 601 24 381 2.24e-28 121
MsG0880042415.01.T01 MTR_3g031610 27.968 379 243 8 232 601 24 381 3.01e-28 120
MsG0880042415.01.T01 MTR_3g031480 28.686 373 235 11 232 594 27 378 1.39e-27 119
MsG0880042415.01.T01 MTR_3g031580 28.571 371 217 13 243 600 38 373 1.29e-26 115
MsG0880042415.01.T01 MTR_4g114280 29.176 425 241 17 227 612 37 440 1.77e-26 115
MsG0880042415.01.T01 MTR_7g092050 28.219 365 217 15 244 599 45 373 1.93e-25 112
MsG0880042415.01.T01 MTR_3g031470 28.418 373 223 11 243 595 37 385 3.13e-25 111
MsG0880042415.01.T01 MTR_1g099400 25.653 421 255 17 225 606 13 414 5.28e-25 110
MsG0880042415.01.T01 MTR_7g058550 26.519 362 230 13 243 594 43 378 6.74e-20 94.7
MsG0880042415.01.T01 MTR_4g094858 24.682 393 251 14 217 594 16 378 2.78e-19 92.8
MsG0880042415.01.T01 MTR_7g058530 25.067 375 245 10 243 609 44 390 3.66e-19 92.4
MsG0880042415.01.T01 MTR_2g089360 26.303 403 234 17 225 596 22 392 5.52e-19 91.7
MsG0880042415.01.T01 MTR_3g031500 28.527 319 191 11 281 594 2 288 1.31e-18 90.5
MsG0880042415.01.T01 MTR_8g465580 27.704 379 214 17 243 595 39 383 2.71e-18 89.4
MsG0880042415.01.T01 MTR_4g081650 25.895 363 229 14 245 594 42 377 3.48e-18 89.4
MsG0880042415.01.T01 MTR_7g053050 23.846 390 262 13 217 596 16 380 6.85e-18 88.2
MsG0880042415.01.T01 MTR_3g107070 27.446 368 218 18 242 600 33 360 2.01e-17 86.7
MsG0880042415.01.T01 MTR_7g058830 23.560 382 255 13 225 595 25 380 3.86e-17 85.9
MsG0880042415.01.T01 MTR_8g465410 27.513 378 216 17 243 595 39 383 1.67e-16 84.0
MsG0880042415.01.T01 MTR_2g011170 26.316 380 218 19 243 595 38 382 5.68e-16 81.6
MsG0880042415.01.T01 MTR_5g013050 36.893 103 58 3 423 519 55 156 6.28e-16 75.9
MsG0880042415.01.T01 MTR_0280s0040 23.896 385 236 14 243 599 42 397 6.56e-16 82.0
MsG0880042415.01.T01 MTR_2g011170 25.789 380 220 18 243 595 38 382 1.49e-15 80.9
MsG0880042415.01.T01 MTR_2g011210 25.062 403 256 15 220 605 27 400 3.51e-15 79.7
MsG0880042415.01.T01 MTR_4g081750 24.932 365 234 13 243 594 40 377 3.75e-15 79.7
MsG0880042415.01.T01 MTR_3g051420 24.060 399 242 16 220 596 27 386 5.28e-15 79.0
MsG0880042415.01.T01 MTR_8g465990 24.806 387 257 13 224 596 22 388 7.89e-15 78.2
MsG0880042415.01.T01 MTR_2g011160 26.221 389 232 18 231 596 27 383 8.03e-15 78.2
MsG0880042415.01.T01 MTR_4g081665 24.590 366 235 13 243 594 39 377 8.31e-15 78.6
MsG0880042415.01.T01 MTR_8g465990 24.806 387 257 13 224 596 22 388 1.33e-14 77.8
MsG0880042415.01.T01 MTR_2g011160 26.221 389 232 18 231 596 27 383 1.54e-14 77.8
MsG0880042415.01.T01 MTR_4g091760 28.389 391 224 19 243 604 39 402 1.60e-14 77.4
MsG0880042415.01.T01 MTR_8g465990 24.806 387 257 13 224 596 22 388 1.68e-14 77.4
MsG0880042415.01.T01 MTR_2g011150 25.587 383 212 18 243 594 43 383 2.87e-14 76.6
MsG0880042415.01.T01 MTR_2g011190 25.984 381 233 15 243 605 45 394 3.17e-14 76.6
MsG0880042415.01.T01 MTR_3g020230 24.603 378 227 16 243 596 44 387 4.20e-14 76.3
MsG0880042415.01.T01 MTR_2g081470 26.131 398 232 17 221 595 20 378 6.73e-14 75.5
MsG0880042415.01.T01 MTR_0090s0020 24.346 382 246 14 231 595 25 380 1.19e-13 74.7
MsG0880042415.01.T01 MTR_0090s0020 24.346 382 246 14 231 595 25 380 1.41e-13 74.7
MsG0880042415.01.T01 MTR_2g011280 23.990 396 234 18 244 605 45 407 1.46e-13 74.3
MsG0880042415.01.T01 MTR_0090s0020 24.346 382 246 14 231 595 25 380 1.62e-13 74.3
MsG0880042415.01.T01 MTR_3g007510 27.344 384 219 20 243 594 40 395 1.69e-13 74.3
MsG0880042415.01.T01 MTR_3g007510 27.344 384 219 20 243 594 40 395 1.83e-13 74.3
MsG0880042415.01.T01 MTR_3g007510 27.344 384 219 20 243 594 40 395 1.87e-13 74.3
MsG0880042415.01.T01 MTR_0090s0020 24.346 382 246 14 231 595 25 380 1.91e-13 73.9
MsG0880042415.01.T01 MTR_1g012550 27.056 377 208 19 242 600 57 384 1.96e-13 73.9
MsG0880042415.01.T01 MTR_2g089440 24.054 370 238 12 250 599 52 398 3.19e-13 73.6
MsG0880042415.01.T01 MTR_5g067290 25.469 373 222 16 243 599 45 377 3.32e-13 72.4
MsG0880042415.01.T01 MTR_8g465980 24.936 389 242 16 225 595 21 377 3.84e-13 73.2
MsG0880042415.01.T01 MTR_3g019420 23.885 381 224 16 243 595 41 383 4.48e-13 72.8
MsG0880042415.01.T01 MTR_3g020320 24.409 381 224 16 243 596 44 387 5.21e-13 72.8
MsG0880042415.01.T01 MTR_2g081500 27.273 374 218 18 243 595 41 381 6.76e-13 72.4
MsG0880042415.01.T01 MTR_8g465570 27.213 305 178 12 243 529 40 318 7.11e-13 72.4
MsG0880042415.01.T01 MTR_2g011270 24.672 381 236 15 250 605 31 385 1.26e-12 71.6
MsG0880042415.01.T01 MTR_4g091680 28.093 388 211 21 243 604 63 408 1.28e-12 71.6
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 1.62e-12 70.9
MsG0880042415.01.T01 MTR_2g103810 26.810 373 217 16 242 600 51 381 1.95e-12 70.9
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 1.97e-12 70.9
MsG0880042415.01.T01 MTR_2g011340 23.333 390 230 19 250 605 53 407 2.03e-12 70.9
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 2.06e-12 70.9
MsG0880042415.01.T01 MTR_4g081655 23.747 379 235 15 243 595 39 389 2.15e-12 70.9
MsG0880042415.01.T01 MTR_7g056420 22.716 405 254 16 219 594 355 729 2.16e-12 70.9
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 2.26e-12 70.5
MsG0880042415.01.T01 MTR_4g081655 24.274 379 233 15 243 595 74 424 2.51e-12 70.5
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 2.53e-12 70.1
MsG0880042415.01.T01 MTR_8g013610 31.361 169 101 7 228 384 28 193 2.68e-12 70.5
MsG0880042415.01.T01 MTR_2g081520 23.989 371 234 14 243 595 38 378 2.85e-12 70.1
MsG0880042415.01.T01 MTR_4g091690 26.752 314 186 14 243 534 61 352 3.63e-12 70.1
MsG0880042415.01.T01 MTR_2g089290 31.492 181 111 6 225 395 26 203 3.73e-12 70.1
MsG0880042415.01.T01 MTR_3g020280 23.342 377 232 14 243 594 41 385 3.96e-12 69.7
MsG0880042415.01.T01 MTR_7g056430 22.716 405 254 16 219 594 355 729 3.97e-12 70.1
MsG0880042415.01.T01 MTR_4g081655 24.274 379 233 15 243 595 74 424 4.12e-12 69.7
MsG0880042415.01.T01 MTR_2g080080 25.337 371 222 16 240 600 53 378 5.30e-12 69.3
MsG0880042415.01.T01 MTR_8g013560 31.361 169 101 7 228 384 27 192 6.75e-12 69.3
MsG0880042415.01.T01 MTR_2g080100 24.219 384 215 18 240 600 54 384 9.82e-12 68.6
MsG0880042415.01.T01 MTR_2g080090 24.611 386 211 19 240 600 53 383 1.00e-11 68.6
MsG0880042415.01.T01 MTR_3g019490 23.020 404 234 17 226 596 22 381 1.03e-11 68.6
MsG0880042415.01.T01 MTR_3g007630 26.963 382 222 21 243 594 41 395 1.24e-11 68.2
MsG0880042415.01.T01 MTR_3g072800 29.392 296 161 14 229 506 28 293 1.85e-11 67.8
MsG0880042415.01.T01 MTR_7g058860 23.757 362 241 12 243 594 42 378 2.06e-11 67.4
MsG0880042415.01.T01 MTR_8g013580 29.139 151 96 4 243 384 51 199 3.88e-11 66.6
MsG0880042415.01.T01 MTR_4g091840 24.479 384 228 16 243 596 56 407 4.70e-11 66.6
MsG0880042415.01.T01 MTR_3g019530 23.645 406 242 16 217 596 21 384 5.91e-11 65.9
MsG0880042415.01.T01 MTR_3g019530 23.645 406 242 16 217 596 21 384 6.66e-11 65.9
MsG0880042415.01.T01 MTR_7g056663 22.030 404 260 17 227 605 25 398 8.13e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042415.01.T01 AT5G60900 45.122 246 116 9 226 456 31 272 1.39e-51 181
MsG0880042415.01.T01 AT5G60900 37.313 134 49 5 54 153 70 202 7.16e-11 64.3
MsG0880042415.01.T01 AT5G24080 27.924 419 254 20 223 609 26 428 9.76e-29 122
MsG0880042415.01.T01 AT2G41890 28.061 392 230 17 225 599 24 380 2.83e-18 89.7
MsG0880042415.01.T01 AT3G12000 26.440 382 238 13 234 595 40 398 7.23e-18 87.0
MsG0880042415.01.T01 AT1G65790 24.552 391 242 12 225 596 28 384 1.94e-17 86.7
MsG0880042415.01.T01 AT1G65790 24.552 391 242 12 225 596 28 384 1.94e-17 86.7
MsG0880042415.01.T01 AT1G65790 24.808 391 241 12 225 596 28 384 3.36e-17 86.3
MsG0880042415.01.T01 AT1G34300 25.000 392 248 17 225 609 25 377 5.26e-17 85.5
MsG0880042415.01.T01 AT1G11340 27.441 379 215 15 243 594 34 379 2.32e-16 83.6
MsG0880042415.01.T01 AT1G11340 26.984 378 218 15 243 594 102 447 2.99e-16 83.2
MsG0880042415.01.T01 AT1G11340 26.984 378 218 15 243 594 102 447 3.77e-16 82.8
MsG0880042415.01.T01 AT4G21390 25.420 417 254 16 221 610 23 409 2.61e-15 80.1
MsG0880042415.01.T01 AT1G11330 25.641 390 247 15 238 605 42 410 2.62e-15 80.1
MsG0880042415.01.T01 AT1G11330 25.641 390 247 15 238 605 42 410 2.98e-15 80.1
MsG0880042415.01.T01 AT1G11330 25.641 390 247 15 238 605 42 410 3.28e-15 79.7
MsG0880042415.01.T01 AT4G21390 25.420 417 254 16 221 610 23 409 3.36e-15 79.7
MsG0880042415.01.T01 AT4G21380 22.704 392 256 13 223 596 28 390 1.82e-14 77.0
MsG0880042415.01.T01 AT1G11410 24.595 370 237 13 243 594 44 389 1.83e-14 77.4
MsG0880042415.01.T01 AT1G11410 24.595 370 237 13 243 594 37 382 1.89e-14 77.4
MsG0880042415.01.T01 AT1G11410 24.595 370 237 13 243 594 13 358 2.20e-14 77.0
MsG0880042415.01.T01 AT4G21380 22.704 392 256 13 223 596 28 390 4.34e-14 76.3
MsG0880042415.01.T01 AT1G11300 24.812 399 244 18 233 605 32 400 8.54e-14 75.1
MsG0880042415.01.T01 AT1G11300 24.812 399 244 18 233 605 32 400 1.03e-13 75.1
MsG0880042415.01.T01 AT1G65800 23.684 380 239 13 238 596 39 388 7.44e-13 72.0
MsG0880042415.01.T01 AT1G78850 23.342 377 248 15 253 606 52 410 8.23e-13 71.2
MsG0880042415.01.T01 AT1G65800 23.684 380 239 13 238 596 39 388 8.80e-13 72.0
MsG0880042415.01.T01 AT1G78860 23.016 378 248 15 253 606 52 410 1.11e-12 70.9
MsG0880042415.01.T01 AT1G11303 24.038 416 238 16 233 610 32 407 2.35e-12 70.9
MsG0880042415.01.T01 AT1G16905 26.741 359 221 18 261 606 69 398 6.70e-12 68.6
MsG0880042415.01.T01 AT4G03230 24.384 365 222 16 265 606 68 401 7.42e-12 68.9
MsG0880042415.01.T01 AT4G03230 24.165 389 239 17 243 606 44 401 8.67e-12 68.9
MsG0880042415.01.T01 AT4G03230 24.165 389 239 17 243 606 44 401 8.67e-12 68.9
MsG0880042415.01.T01 AT1G11350 26.730 419 216 22 232 605 26 398 2.67e-11 67.4
MsG0880042415.01.T01 AT1G61400 24.165 389 244 14 243 610 48 406 3.19e-11 67.0
MsG0880042415.01.T01 AT4G32300 33.858 127 78 3 242 367 47 168 3.59e-11 67.0
MsG0880042415.01.T01 AT1G61380 23.155 393 249 17 243 610 35 399 3.84e-11 66.6
MsG0880042415.01.T01 AT1G61400 24.165 389 244 14 243 610 48 406 3.84e-11 66.6
MsG0880042415.01.T01 AT5G24080 25.079 315 191 17 326 609 1 301 6.52e-11 65.9
MsG0880042415.01.T01 AT5G24080 25.079 315 191 17 326 609 1 301 6.52e-11 65.9

Find 150 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGCTTTCTTCAAGGTTTA+AGG 0.109452 8:+8427353 MsG0880042415.01.T01:CDS
CCATGGTTGCTTTCACCTTC+TGG 0.162410 8:+8426985 MsG0880042415.01.T01:CDS
ATCAGGGTACTTGTATGTTT+TGG 0.196804 8:+8427542 MsG0880042415.01.T01:CDS
ATAGTTGTTGCAACTCTTAA+TGG 0.237546 8:+8428108 MsG0880042415.01.T01:CDS
CTACACTGCTCTTCAGTAAA+AGG 0.260924 8:-8427996 None:intergenic
ATGGTGAACTTAACAGTCTT+TGG 0.262148 8:+8424962 MsG0880042415.01.T01:CDS
ACCAATGGCTATGGTACTTT+TGG 0.266017 8:-8426932 None:intergenic
AGTATAAGTACATATATTAA+AGG 0.280779 8:-8427727 None:intergenic
CCTTCTGGTGACTTTGCCTT+TGG 0.284286 8:+8427000 MsG0880042415.01.T01:CDS
TCAATCAGTGAGTAATGTTT+TGG 0.296727 8:-8427828 None:intergenic
CACTGGCAACTTTGTGCTTC+AGG 0.298549 8:+8427248 MsG0880042415.01.T01:CDS
TCACTCTTAGTTGAACTCTT+AGG 0.318025 8:-8427678 None:intergenic
TCCATAACCTGACACCATTT+GGG 0.321032 8:-8427179 None:intergenic
CCTTCTCAAGTTGTGGATAA+AGG 0.330526 8:+8427327 MsG0880042415.01.T01:CDS
CCCCAAATGGTGTCAGGTTA+TGG 0.333819 8:+8427178 MsG0880042415.01.T01:CDS
TTCCATAACCTGACACCATT+TGG 0.334304 8:-8427180 None:intergenic
TATAATAGCTTCTGCACTTT+GGG 0.334674 8:+8427777 MsG0880042415.01.T01:CDS
AACAAAACAACAATGGAATA+AGG 0.335885 8:-8428343 None:intergenic
AGGTATACGGTGGCCGGCGC+CGG 0.335964 8:+8425879 MsG0880042415.01.T01:intron
TGGCATCATTGGTACGAAAA+TGG 0.339686 8:+8425921 MsG0880042415.01.T01:CDS
CAGCTGCCATATGGATCATT+AGG 0.345935 8:-8427852 None:intergenic
GCACATCCTTGTATGAAATC+TGG 0.361226 8:-8427879 None:intergenic
CAATTGGTCTTTGACAAATC+AGG 0.365276 8:+8427525 MsG0880042415.01.T01:CDS
TTCCATAGCATGTCACCATT+TGG 0.368612 8:-8424871 None:intergenic
TGACAGGTATGGTGGAACTA+TGG 0.376095 8:-8428170 None:intergenic
TAAATATTCTCTAAATAAGT+TGG 0.379983 8:+8428204 MsG0880042415.01.T01:three_prime_UTR
GCAAAGAAGGTTGGCATCAT+TGG 0.382607 8:+8425910 MsG0880042415.01.T01:CDS
CATTCTATTAATTTACCATC+TGG 0.385953 8:+8427438 MsG0880042415.01.T01:CDS
TTTAAACTAGTATACCATTT+GGG 0.386881 8:-8425628 None:intergenic
TGACGCCTTCTTGCCTTCTC+AGG 0.401906 8:+8425005 MsG0880042415.01.T01:CDS
ACCTTCTTTGCCACACCGCC+CGG 0.405497 8:-8425898 None:intergenic
TGGTGAACTTAACAGTCTTT+GGG 0.415246 8:+8424963 MsG0880042415.01.T01:CDS
GAGAAACTCACTGCCAATGA+TGG 0.416886 8:+8424832 MsG0880042415.01.T01:CDS
ATCAAGTGCTGGAGCTCAAT+TGG 0.420184 8:+8427509 MsG0880042415.01.T01:CDS
TTGTGCTTCACTTGCCCAAA+TGG 0.422490 8:+8425614 MsG0880042415.01.T01:CDS
AAGGAAGAAAGCTTTCTTCA+AGG 0.423341 8:+8427346 MsG0880042415.01.T01:CDS
GGTATACGGTGGCCGGCGCC+GGG 0.423801 8:+8425880 MsG0880042415.01.T01:intron
TTTGCCACACCGCCCGGCGC+CGG 0.426356 8:-8425892 None:intergenic
CACTTACTTTATTCTCGTGT+TGG 0.430276 8:-8422778 None:intergenic
CTCCAAATGGTGACATGCTA+TGG 0.432332 8:+8424869 MsG0880042415.01.T01:CDS
TCAGGTTAGGTGATAGTTGT+TGG 0.437474 8:+8428060 MsG0880042415.01.T01:CDS
CGAAAATGGCCGGAGGCAGC+TGG 0.438343 8:+8425935 MsG0880042415.01.T01:CDS
TCTGGCTTGCAGCTGCCATA+TGG 0.441887 8:-8427861 None:intergenic
ACTCTATCACCAAGCCCCTC+AGG 0.442069 8:-8424895 None:intergenic
AGCTCCAGCACTTGATGTAC+TGG 0.446907 8:-8427502 None:intergenic
GTGGAACTCACTGCCAATGA+TGG 0.454151 8:+8427141 MsG0880042415.01.T01:CDS
AAAGAGACTAATTTCAGTAA+AGG 0.455417 8:+8425042 MsG0880042415.01.T01:CDS
CTCTAAATAAGTTGGTTAGC+AGG 0.456002 8:+8428212 MsG0880042415.01.T01:three_prime_UTR
ACTGTTGTGTGGTATGCTAA+TGG 0.458658 8:+8427090 MsG0880042415.01.T01:CDS
AGCTAGCACCAGCCCATCAT+TGG 0.459051 8:-8424845 None:intergenic
CGTTTCTAAGACTTGACTCC+AGG 0.463553 8:-8422410 None:intergenic
GTGGCCGGCGCCGGGCGGTG+TGG 0.463733 8:+8425888 MsG0880042415.01.T01:CDS
AGAAATGTTTGCATACCAAA+TGG 0.463887 8:-8424809 None:intergenic
TGGAGTGGCTCCAAGACGAC+AGG 0.465726 8:+8425955 MsG0880042415.01.T01:CDS
TGCCTTCTCAGGTTGTTGAA+AGG 0.468344 8:+8425016 MsG0880042415.01.T01:CDS
GTGAAGGTTGGACCACAGTA+TGG 0.468347 8:+8427697 MsG0880042415.01.T01:CDS
CTATGGAACCCTGAGGGGCT+TGG 0.468655 8:+8424886 MsG0880042415.01.T01:CDS
CTGGTGCTAGCTTCTCCAAA+TGG 0.475850 8:+8424856 MsG0880042415.01.T01:CDS
ATTGATCCTAATGATCCATA+TGG 0.477623 8:+8427846 MsG0880042415.01.T01:CDS
AAGGAGACAGATTTCAGTAA+AGG 0.480815 8:+8427372 MsG0880042415.01.T01:CDS
ATTTAATACTAATTTGTGAC+AGG 0.481714 8:-8428186 None:intergenic
TACTTTGAAAGTAATACTGT+TGG 0.483409 8:+8427477 MsG0880042415.01.T01:CDS
TGCAACTCTTAATGGTGCTA+AGG 0.486847 8:+8428116 MsG0880042415.01.T01:exon
ATATAATAGCTTCTGCACTT+TGG 0.487312 8:+8427776 MsG0880042415.01.T01:CDS
GTATAAGTACATATATTAAA+GGG 0.488197 8:-8427726 None:intergenic
GGTTAGCAGGTGTTAGATGC+TGG 0.489359 8:+8428225 MsG0880042415.01.T01:three_prime_UTR
GAGTCGAGGCAGGAATTGAA+TGG 0.490520 8:+8422376 MsG0880042415.01.T01:CDS
CCTTTATCCACAACTTGAGA+AGG 0.492964 8:-8427327 None:intergenic
AGAGACTCACCCTGTCGTCT+TGG 0.497938 8:-8425965 None:intergenic
AGTTAGCACCAACCCATCAT+TGG 0.498106 8:-8427154 None:intergenic
GCCGGGCGGTGTGGCAAAGA+AGG 0.501163 8:+8425897 MsG0880042415.01.T01:CDS
GCAGTGTAGGAAATCTTGTA+TGG 0.504417 8:+8428010 MsG0880042415.01.T01:CDS
ATACTAATTTGTGACAGGTA+TGG 0.507981 8:-8428181 None:intergenic
CAACAACTATCATTTGAAAG+TGG 0.508032 8:-8428095 None:intergenic
GGATGATTGTTTGTGTTCTG+TGG 0.510059 8:+8428031 MsG0880042415.01.T01:CDS
ATGGCCGGAGGCAGCTGGAG+TGG 0.516737 8:+8425940 MsG0880042415.01.T01:CDS
AAAAGAATCACCAATGGCTA+TGG 0.516781 8:-8426941 None:intergenic
AGTGCAGGTAGTGGTGTTTG+TGG 0.518931 8:+8427753 MsG0880042415.01.T01:CDS
GGAGCCACTCCAGCTGCCTC+CGG 0.519400 8:-8425944 None:intergenic
GCAGGAATTGAATGGGATGT+AGG 0.520838 8:+8422384 MsG0880042415.01.T01:CDS
TAACTTCCCCAAATGGTGTC+AGG 0.521731 8:+8427172 MsG0880042415.01.T01:CDS
TATCAGATTATGTGCTTCAA+AGG 0.523234 8:+8427973 MsG0880042415.01.T01:CDS
TTGGTGCTAACTTCCCCAAA+TGG 0.527112 8:+8427165 MsG0880042415.01.T01:CDS
ACTCACTGCCAATGATGGGC+TGG 0.527611 8:+8424837 MsG0880042415.01.T01:CDS
ATCATTGGTACGAAAATGGC+CGG 0.529914 8:+8425925 MsG0880042415.01.T01:CDS
CTTGTTGCCTTCTCAAGTTG+TGG 0.533132 8:+8427320 MsG0880042415.01.T01:CDS
TGTGGTGTGTTCAATGACAT+TGG 0.533191 8:+8424922 MsG0880042415.01.T01:CDS
AGCCTTTCAACAACCTGAGA+AGG 0.536142 8:-8425018 None:intergenic
AATTGGTCTTTGACAAATCA+GGG 0.536218 8:+8427526 MsG0880042415.01.T01:CDS
TGAAGCACATAATCTGATAG+AGG 0.536988 8:-8427969 None:intergenic
CATTGGAAACTCTGTGCTTG+AGG 0.537589 8:+8424939 MsG0880042415.01.T01:CDS
AGACAGATTTCAGTAAAGGA+AGG 0.543432 8:+8427376 MsG0880042415.01.T01:CDS
GAGATCCTTCTACAAAATGA+TGG 0.546683 8:+8425072 MsG0880042415.01.T01:CDS
GGATCCAGTACATCAAGTGC+TGG 0.549542 8:+8427498 MsG0880042415.01.T01:CDS
GGAGACAGTCCTGCACCAAA+AGG 0.549672 8:+8427111 MsG0880042415.01.T01:CDS
TGCAAGCCAGATTTCATACA+AGG 0.550125 8:+8427873 MsG0880042415.01.T01:CDS
GACAGGTATGGTGGAACTAT+GGG 0.550857 8:-8428169 None:intergenic
GGCGGTGTGGCAAAGAAGGT+TGG 0.558918 8:+8425901 MsG0880042415.01.T01:CDS
GTATGTCTTGTATCAAGTTG+TGG 0.561892 8:+8428288 MsG0880042415.01.T01:three_prime_UTR
AGTCGAGGCAGGAATTGAAT+GGG 0.562815 8:+8422377 MsG0880042415.01.T01:CDS
TGCACCAAAAGGATCAAAAG+TGG 0.563251 8:+8427122 MsG0880042415.01.T01:CDS
ACCAAAAGTACCATAGCCAT+TGG 0.565235 8:+8426931 MsG0880042415.01.T01:CDS
TATACTGTTAGTGCAGGTAG+TGG 0.565930 8:+8427744 MsG0880042415.01.T01:CDS
GAAGGCAACAAGGTGTCACT+AGG 0.565970 8:-8427309 None:intergenic
CTCTATCACCAAGCCCCTCA+GGG 0.566871 8:-8424894 None:intergenic
AAAAGATTAGTGTCTTTGAG+TGG 0.569176 8:-8427030 None:intergenic
AAGCAACCATGGAGATGTGC+TGG 0.569700 8:-8426974 None:intergenic
ATGGTAAATTCAACAGTCTG+TGG 0.569947 8:+8427271 MsG0880042415.01.T01:CDS
TGAATGGGATGTAGGAGACC+TGG 0.571871 8:+8422392 MsG0880042415.01.T01:CDS
AGAAACTCACTGCCAATGAT+GGG 0.573388 8:+8424833 MsG0880042415.01.T01:CDS
GGAAACTCTGTGCTTGAGGA+TGG 0.575358 8:+8424943 MsG0880042415.01.T01:CDS
GGCAACTTTGTGCTTCAGGA+TGG 0.577553 8:+8427252 MsG0880042415.01.T01:CDS
TGTACTTATACTGTTAGTGC+AGG 0.578443 8:+8427738 MsG0880042415.01.T01:CDS
AATTTAGGTAGTGATGTTTG+TGG 0.578508 8:+8425519 MsG0880042415.01.T01:intron
CGCGGTGTATTGAATGACAC+TGG 0.581627 8:+8427231 MsG0880042415.01.T01:CDS
ACAATTATAAAATTTGCAGT+AGG 0.582274 8:-8425550 None:intergenic
CTAATTTGTGACAGGTATGG+TGG 0.587677 8:-8428178 None:intergenic
ACTATGAAAAGAGTCGAGGC+AGG 0.588551 8:+8422366 None:intergenic
TGGTAAATTCAACAGTCTGT+GGG 0.591832 8:+8427272 MsG0880042415.01.T01:CDS
CTTGGTGATAGAGTTTCTTG+TGG 0.592795 8:+8424904 MsG0880042415.01.T01:CDS
AGACTAATTTCAGTAAAGGA+AGG 0.594962 8:+8425046 MsG0880042415.01.T01:CDS
TGACTTTAAACAACAAAACA+AGG 0.595220 8:-8428249 None:intergenic
CACAAGCCAGCACATCTCCA+TGG 0.597254 8:+8426968 MsG0880042415.01.T01:CDS
CCAGAAGGTGAAAGCAACCA+TGG 0.600409 8:-8426985 None:intergenic
GACATGCTATGGAACCCTGA+GGG 0.606652 8:+8424880 MsG0880042415.01.T01:CDS
ACTCACTGCCAATGATGGGT+TGG 0.610259 8:+8427146 MsG0880042415.01.T01:CDS
AAGAGTTCAACTAAGAGTGA+AGG 0.613595 8:+8427681 MsG0880042415.01.T01:CDS
TATCCAAAACAAAACAACAA+TGG 0.614201 8:-8428350 None:intergenic
AACAACCTGAGAAGGCAAGA+AGG 0.614766 8:-8425010 None:intergenic
TTTCTTTAACCACATTGGAG+TGG 0.615190 8:+8425586 MsG0880042415.01.T01:CDS
GTTCAACTAAGAGTGAAGGT+TGG 0.619862 8:+8427685 MsG0880042415.01.T01:CDS
CTCAATGTTAAAGTTTCTCG+CGG 0.620103 8:+8427213 MsG0880042415.01.T01:CDS
TTTCCGAGAAAACTGTTGTG+TGG 0.627609 8:+8427079 MsG0880042415.01.T01:CDS
TGCAGTAAAAGAATCACCAA+TGG 0.629150 8:-8426947 None:intergenic
TGGAACTCACTGCCAATGAT+GGG 0.629211 8:+8427142 MsG0880042415.01.T01:CDS
GTCAGGTTATGGAATACTGA+AGG 0.629411 8:+8427189 MsG0880042415.01.T01:CDS
ATACGGTGGCCGGCGCCGGG+CGG 0.633950 8:+8425883 MsG0880042415.01.T01:CDS
CACAACTTGAGAAGGCAACA+AGG 0.635203 8:-8427319 None:intergenic
CCAAAGGCAAAGTCACCAGA+AGG 0.636933 8:-8427000 None:intergenic
CCATAACCTGACACCATTTG+GGG 0.639256 8:-8427178 None:intergenic
TTTGAGTGGAAGAAAACCAA+AGG 0.654690 8:-8427016 None:intergenic
AGGTATGGTGGAACTATGGG+AGG 0.656973 8:-8428166 None:intergenic
GGAGTGGCTCCAAGACGACA+GGG 0.664654 8:+8425956 MsG0880042415.01.T01:CDS
ACATGCTATGGAACCCTGAG+GGG 0.673116 8:+8424881 MsG0880042415.01.T01:CDS
TGCTCTAAGATAGAATTGTG+TGG 0.685180 8:-8427616 None:intergenic
GTGTACTATGAAAAGAGTCG+AGG 0.704366 8:+8422362 None:intergenic
ATTGGTACGAAAATGGCCGG+AGG 0.726443 8:+8425928 MsG0880042415.01.T01:CDS
ACAACTTGACCACTCCAATG+TGG 0.728821 8:-8425595 None:intergenic
AAAGGGCTTAGACCATACTG+TGG 0.757626 8:-8427709 None:intergenic
TGACATGCTATGGAACCCTG+AGG 0.767248 8:+8424879 MsG0880042415.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATCTATAAATCATA+TGG + Chr8:8426736-8426755 MsG0880042415.01.T01:intron 10.0%
!! CCTAATAAAATTAATAAATA+AGG + Chr8:8423374-8423393 MsG0880042415.01.T01:intron 10.0%
!! TGTAATTATATTGTTAATTT+AGG + Chr8:8425504-8425523 MsG0880042415.01.T01:intron 10.0%
!!! ATTTTAATTTTCTATGAAAA+AGG + Chr8:8426609-8426628 MsG0880042415.01.T01:intron 10.0%
!!! ATTTTTATTTTCTATGAAAA+GGG + Chr8:8424392-8424411 MsG0880042415.01.T01:intron 10.0%
!!! CCTTATTTATTAATTTTATT+AGG - Chr8:8423377-8423396 None:intergenic 10.0%
!!! TATTTTTATTTTCTATGAAA+AGG + Chr8:8424391-8424410 MsG0880042415.01.T01:intron 10.0%
!!! TTTTAATTTTCTATGAAAAA+GGG + Chr8:8426610-8426629 MsG0880042415.01.T01:intron 10.0%
!!! TTTTTTGTTAATTTAACATT+TGG + Chr8:8425108-8425127 MsG0880042415.01.T01:intron 10.0%
!! AAATATTAATTTACCCAATA+TGG + Chr8:8423574-8423593 MsG0880042415.01.T01:intron 15.0%
!! AGTATAAGTACATATATTAA+AGG - Chr8:8427730-8427749 None:intergenic 15.0%
!! ATAATGTAATATATATGTAG+AGG - Chr8:8423510-8423529 None:intergenic 15.0%
!! ATATAATTACACATATTATC+AGG - Chr8:8425495-8425514 None:intergenic 15.0%
!! ATATGATAATATCTGTAAAA+GGG - Chr8:8425998-8426017 None:intergenic 15.0%
!! ATATTGGGTAAATTAATATT+TGG - Chr8:8423575-8423594 None:intergenic 15.0%
!! GTATAAGTACATATATTAAA+GGG - Chr8:8427729-8427748 None:intergenic 15.0%
!! TAAAGAGTTGAATTTAAATA+TGG + Chr8:8423064-8423083 MsG0880042415.01.T01:intron 15.0%
!! TAAATATTCTCTAAATAAGT+TGG + Chr8:8428204-8428223 MsG0880042415.01.T01:three_prime_UTR 15.0%
!! TAATGTAATATATATGTAGA+GGG - Chr8:8423509-8423528 None:intergenic 15.0%
!! TATATGATAATATCTGTAAA+AGG - Chr8:8425999-8426018 None:intergenic 15.0%
!! TATTTCCTATAAAAATCATA+TGG + Chr8:8426814-8426833 MsG0880042415.01.T01:intron 15.0%
!!! TTTCTAATTTTAACTATCTT+AGG - Chr8:8424109-8424128 None:intergenic 15.0%
!!! TTTTTTCATTTCAACTTAAA+CGG - Chr8:8422700-8422719 None:intergenic 15.0%
!! AATTAAACCAACTTGTATAT+TGG + Chr8:8424010-8424029 MsG0880042415.01.T01:intron 20.0%
!! ACAATTATAAAATTTGCAGT+AGG - Chr8:8425553-8425572 None:intergenic 20.0%
!! ATTGAAGTTAATGTTAGTAT+TGG - Chr8:8426402-8426421 None:intergenic 20.0%
!! ATTTAAACTAGTATACCATT+TGG - Chr8:8425632-8425651 None:intergenic 20.0%
!! CTTTCAACAAAAAAATTCTT+GGG + Chr8:8422566-8422585 MsG0880042415.01.T01:intron 20.0%
!! TCTATTTACTATGAATCATA+TGG + Chr8:8424563-8424582 MsG0880042415.01.T01:intron 20.0%
!! TCTTTCAACAAAAAAATTCT+TGG + Chr8:8422565-8422584 MsG0880042415.01.T01:intron 20.0%
!! TTAATTGTAATAACATGTGT+CGG - Chr8:8425321-8425340 None:intergenic 20.0%
!! TTTAAACTAGTATACCATTT+GGG - Chr8:8425631-8425650 None:intergenic 20.0%
!! TTTAGATTATAGAACCAATT+CGG - Chr8:8424590-8424609 None:intergenic 20.0%
!! TTTCATCATTGTGTAATAAT+AGG + Chr8:8423822-8423841 MsG0880042415.01.T01:intron 20.0%
!!! ATCAACTTTTTAACTATCTT+AGG - Chr8:8426315-8426334 None:intergenic 20.0%
!!! ATCTTTTTTTGCTTTCAATT+TGG + Chr8:8427046-8427065 MsG0880042415.01.T01:CDS 20.0%
!!! ATTTAATACTAATTTGTGAC+AGG - Chr8:8428189-8428208 None:intergenic 20.0%
!!! TACTGCAAATTTTATAATTG+TGG + Chr8:8425552-8425571 MsG0880042415.01.T01:CDS 20.0%
!!! TATACAAGTTGGTTTAATTT+TGG - Chr8:8424009-8424028 None:intergenic 20.0%
!!! TTATTTTCTATAAAAATGGG+AGG + Chr8:8423962-8423981 MsG0880042415.01.T01:intron 20.0%
!!! TTGATCCATATGATTTTTAT+AGG - Chr8:8426822-8426841 None:intergenic 20.0%
!!! TTTAATTTTGGAGATAACAA+AGG - Chr8:8423997-8424016 None:intergenic 20.0%
! AAAGAGACTAATTTCAGTAA+AGG + Chr8:8425042-8425061 MsG0880042415.01.T01:CDS 25.0%
! AAATGGAAAGCAAAAAAACA+TGG - Chr8:8424795-8424814 None:intergenic 25.0%
! AACAAAACAACAATGGAATA+AGG - Chr8:8428346-8428365 None:intergenic 25.0%
! ACACAATGATGAAAATTTAC+AGG - Chr8:8423816-8423835 None:intergenic 25.0%
! ATAAATCATATGGACCAAAT+TGG + Chr8:8426746-8426765 MsG0880042415.01.T01:intron 25.0%
! ATCTCATTGACAAATAAATG+TGG - Chr8:8423235-8423254 None:intergenic 25.0%
! ATTAGAAATGACAACATTGT+AGG + Chr8:8422853-8422872 MsG0880042415.01.T01:intron 25.0%
! CATTCTATTAATTTACCATC+TGG + Chr8:8427438-8427457 MsG0880042415.01.T01:CDS 25.0%
! CTTCTTATTATAGAATCTAC+AGG - Chr8:8422954-8422973 None:intergenic 25.0%
! GAGAACAAAATATTCTTGTT+TGG + Chr8:8424261-8424280 MsG0880042415.01.T01:intron 25.0%
! GTAATTCATTGTATTCAAGT+TGG + Chr8:8422625-8422644 MsG0880042415.01.T01:intron 25.0%
! GTATAAACATTGTGGAAAAT+AGG + Chr8:8422898-8422917 MsG0880042415.01.T01:intron 25.0%
! TAACAGACAAAATTAGTGAA+CGG + Chr8:8426086-8426105 MsG0880042415.01.T01:intron 25.0%
! TAATTTACCCAATATGGTTT+AGG + Chr8:8423580-8423599 MsG0880042415.01.T01:intron 25.0%
! TACTAAACCAATATACAAGT+TGG - Chr8:8424020-8424039 None:intergenic 25.0%
! TAGTTTAAATAAGATTGTCC+CGG + Chr8:8423624-8423643 MsG0880042415.01.T01:intron 25.0%
! TATGCACTAAAATCAACATT+TGG - Chr8:8423792-8423811 None:intergenic 25.0%
! TCAATACTAATGTGAGTATT+TGG - Chr8:8424199-8424218 None:intergenic 25.0%
! TCATACTAAATCAACAAACA+AGG - Chr8:8426674-8426693 None:intergenic 25.0%
! TGACTTTAAACAACAAAACA+AGG - Chr8:8428252-8428271 None:intergenic 25.0%
! TGTATAACAAAAAACACATG+AGG - Chr8:8422671-8422690 None:intergenic 25.0%
! TTACACAGTTTAGATATCTT+GGG + Chr8:8422537-8422556 MsG0880042415.01.T01:intron 25.0%
! TTAGAAATGACAACATTGTA+GGG + Chr8:8422854-8422873 MsG0880042415.01.T01:intron 25.0%
! TTAGATTATAGAACCAATTC+GGG - Chr8:8424589-8424608 None:intergenic 25.0%
! TTCCACAATGTTTATACTAT+AGG - Chr8:8422895-8422914 None:intergenic 25.0%
!! AGATCATTTCTCTTTTTACT+TGG - Chr8:8427915-8427934 None:intergenic 25.0%
!! GATGTATTCTAGTGATTTTA+AGG - Chr8:8426040-8426059 None:intergenic 25.0%
!! TACTTTGAAAGTAATACTGT+TGG + Chr8:8427477-8427496 MsG0880042415.01.T01:CDS 25.0%
!! TCTTCTATTAACTTTTCGTT+AGG + Chr8:8424749-8424768 MsG0880042415.01.T01:intron 25.0%
!! TGATTATTGAATACGTTTTC+AGG - Chr8:8426228-8426247 None:intergenic 25.0%
!! TGTTTTATGGAACAAAGTAT+TGG + Chr8:8422745-8422764 MsG0880042415.01.T01:CDS 25.0%
!! TTCATTTTCTTTAACCACAT+TGG + Chr8:8425581-8425600 MsG0880042415.01.T01:CDS 25.0%
!! TTTAGTATGAGTTGACTATA+AGG + Chr8:8426684-8426703 MsG0880042415.01.T01:intron 25.0%
!! TTTTCATTAACATAACCAGA+TGG - Chr8:8427456-8427475 None:intergenic 25.0%
!! TTTTCATTCCTACTAGATTT+TGG - Chr8:8423285-8423304 None:intergenic 25.0%
!!! AAAGTTGATAACAAATAGAC+AGG + Chr8:8426326-8426345 MsG0880042415.01.T01:intron 25.0%
!!! ACTAAGTGCTTTAATTTTGA+TGG + Chr8:8424529-8424548 MsG0880042415.01.T01:intron 25.0%
!!! ATACATTACAATTTTGACCA+TGG - Chr8:8426585-8426604 None:intergenic 25.0%
!!! ATCTTAGGTTATAGTTTTAC+AGG - Chr8:8424094-8424113 None:intergenic 25.0%
!!! ATGTTTTTTTGCTTTCCATT+TGG + Chr8:8424794-8424813 MsG0880042415.01.T01:CDS 25.0%
!!! TATTCCATTGTTGTTTTGTT+TGG + Chr8:8428346-8428365 MsG0880042415.01.T01:three_prime_UTR 25.0%
!!! TCTTAGGTTATAGTTTTACA+GGG - Chr8:8424093-8424112 None:intergenic 25.0%
!!! TTGGTTCTATAATCTAAACA+TGG + Chr8:8424592-8424611 MsG0880042415.01.T01:intron 25.0%
AAAAGATTAGTGTCTTTGAG+TGG - Chr8:8427033-8427052 None:intergenic 30.0%
AAAGCTTTCTTCAAGGTTTA+AGG + Chr8:8427353-8427372 MsG0880042415.01.T01:CDS 30.0%
AAGAAGAGTAGATCAAATAG+AGG + Chr8:8422968-8422987 MsG0880042415.01.T01:intron 30.0%
AATTTAGGTAGTGATGTTTG+TGG + Chr8:8425519-8425538 MsG0880042415.01.T01:intron 30.0%
AGAAATGTTTGCATACCAAA+TGG - Chr8:8424812-8424831 None:intergenic 30.0%
AGACTAATTTCAGTAAAGGA+AGG + Chr8:8425046-8425065 MsG0880042415.01.T01:CDS 30.0%
AGATGAAAACAACCATGAAA+AGG - Chr8:8424732-8424751 None:intergenic 30.0%
ATAAGAGAAACTATCAGGAA+AGG + Chr8:8423032-8423051 MsG0880042415.01.T01:intron 30.0%
ATAGCAAAAAGAGAGGAATT+TGG + Chr8:8424137-8424156 MsG0880042415.01.T01:intron 30.0%
ATAGTTGTTGCAACTCTTAA+TGG + Chr8:8428108-8428127 MsG0880042415.01.T01:CDS 30.0%
ATATAATAGCTTCTGCACTT+TGG + Chr8:8427776-8427795 MsG0880042415.01.T01:CDS 30.0%
ATCAGTGAGGAGAAATATTA+GGG + Chr8:8423309-8423328 MsG0880042415.01.T01:intron 30.0%
ATTGATCCTAATGATCCATA+TGG + Chr8:8427846-8427865 MsG0880042415.01.T01:CDS 30.0%
CAAACATTATCCCATTAAGT+GGG - Chr8:8423134-8423153 None:intergenic 30.0%
CAACAACTATCATTTGAAAG+TGG - Chr8:8428098-8428117 None:intergenic 30.0%
CACCTATAGTATAAACATTG+TGG + Chr8:8422890-8422909 MsG0880042415.01.T01:intron 30.0%
CATGGATGACAAAAGTAAAT+AGG + Chr8:8425762-8425781 MsG0880042415.01.T01:intron 30.0%
GAAAATAGGTTTATGTGGTT+TGG + Chr8:8422912-8422931 MsG0880042415.01.T01:intron 30.0%
GAACTATAAGAGAAACTATC+AGG + Chr8:8423027-8423046 MsG0880042415.01.T01:intron 30.0%
GGAATTTGGTTACATAGATT+CGG + Chr8:8424151-8424170 MsG0880042415.01.T01:intron 30.0%
GTTACACAGTTTAGATATCT+TGG + Chr8:8422536-8422555 MsG0880042415.01.T01:intron 30.0%
GTTTCTCTTATAGTTCTTCT+AGG - Chr8:8423023-8423042 None:intergenic 30.0%
TACTAAATCAACAAACAAGG+TGG - Chr8:8426671-8426690 None:intergenic 30.0%
TATAATAGCTTCTGCACTTT+GGG + Chr8:8427777-8427796 MsG0880042415.01.T01:CDS 30.0%
TATCAGATTATGTGCTTCAA+AGG + Chr8:8427973-8427992 MsG0880042415.01.T01:CDS 30.0%
TATCTCACCTAAACCATATT+GGG - Chr8:8423590-8423609 None:intergenic 30.0%
TCACATTACTAGAGTAACAA+TGG - Chr8:8426260-8426279 None:intergenic 30.0%
TTATCTCACCTAAACCATAT+TGG - Chr8:8423591-8423610 None:intergenic 30.0%
TTGAAACATAGCAAAAAGAG+AGG + Chr8:8424130-8424149 MsG0880042415.01.T01:intron 30.0%
TTGATTCCACATTCTAAACA+TGG + Chr8:8426843-8426862 MsG0880042415.01.T01:intron 30.0%
TTGTGGAAAATAGGTTTATG+TGG + Chr8:8422907-8422926 MsG0880042415.01.T01:intron 30.0%
TTGTTACTCTAGTAATGTGA+TGG + Chr8:8426260-8426279 MsG0880042415.01.T01:intron 30.0%
! AACAGTTTTCTCGGAAATTT+TGG - Chr8:8427076-8427095 None:intergenic 30.0%
! ACAGTTTTCTCGGAAATTTT+GGG - Chr8:8427075-8427094 None:intergenic 30.0%
! ACTTTTGTCATCCATGAATT+TGG - Chr8:8425758-8425777 None:intergenic 30.0%
! AGAGCAACTCTTAATTTTGA+TGG + Chr8:8427633-8427652 MsG0880042415.01.T01:CDS 30.0%
! AGTCATATTACAAGAGGTAT+AGG + Chr8:8422993-8423012 MsG0880042415.01.T01:intron 30.0%
! ATACTAATTTGTGACAGGTA+TGG - Chr8:8428184-8428203 None:intergenic 30.0%
! GATTACCATCATTTTGTAGA+AGG - Chr8:8425080-8425099 None:intergenic 30.0%
! GTATTTGTGTTCTTCTAAAG+TGG - Chr8:8424354-8424373 None:intergenic 30.0%
! GTCAGAACAAAGATGTTTTA+TGG + Chr8:8422732-8422751 MsG0880042415.01.T01:CDS 30.0%
! TCAATCAGTGAGTAATGTTT+TGG - Chr8:8427831-8427850 None:intergenic 30.0%
!! AATTAGTCTTTGACAGATCA+GGG + Chr8:8425204-8425223 MsG0880042415.01.T01:intron 30.0%
!! AATTGGTCTTTGACAAATCA+GGG + Chr8:8427526-8427545 MsG0880042415.01.T01:CDS 30.0%
!! ATTAGGGTTAGCATTTTAGA+GGG + Chr8:8423325-8423344 MsG0880042415.01.T01:intron 30.0%
!! TATTAGGGTTAGCATTTTAG+AGG + Chr8:8423324-8423343 MsG0880042415.01.T01:intron 30.0%
!! TGTTTTGGACATTGACATTT+TGG - Chr8:8427816-8427835 None:intergenic 30.0%
!! TTCATTGTATTCAAGTTGGA+TGG + Chr8:8422629-8422648 MsG0880042415.01.T01:intron 30.0%
!! TTGTTGTTGTCGTTATCTTT+TGG + Chr8:8423158-8423177 MsG0880042415.01.T01:intron 30.0%
!!! CAACTAGTCTGTTATTTTCT+TGG + Chr8:8425702-8425721 MsG0880042415.01.T01:intron 30.0%
AAAAGAATCACCAATGGCTA+TGG - Chr8:8426944-8426963 None:intergenic 35.0%
AAACAACCATGAAAAGGAGT+TGG - Chr8:8424726-8424745 None:intergenic 35.0%
AAGAGTTCAACTAAGAGTGA+AGG + Chr8:8427681-8427700 MsG0880042415.01.T01:CDS 35.0%
AAGGAAGAAAGCTTTCTTCA+AGG + Chr8:8427346-8427365 MsG0880042415.01.T01:CDS 35.0%
AAGGAGACAGATTTCAGTAA+AGG + Chr8:8427372-8427391 MsG0880042415.01.T01:CDS 35.0%
AAGTATACCAACTTGTGTGT+TGG + Chr8:8424449-8424468 MsG0880042415.01.T01:intron 35.0%
AATGAACATGACAGAAGAAG+AGG + Chr8:8425843-8425862 MsG0880042415.01.T01:intron 35.0%
ACAACATTGTAGGGATAGTT+GGG + Chr8:8422863-8422882 MsG0880042415.01.T01:intron 35.0%
ACGAAGTAGTTCAAACATAG+AGG + Chr8:8422487-8422506 MsG0880042415.01.T01:intron 35.0%
ACGAGAATAAAGTAAGTGTG+TGG + Chr8:8422783-8422802 MsG0880042415.01.T01:intron 35.0%
AGACAGATTTCAGTAAAGGA+AGG + Chr8:8427376-8427395 MsG0880042415.01.T01:CDS 35.0%
AGTAAATAGGTGGAAACAGA+AGG + Chr8:8425775-8425794 MsG0880042415.01.T01:intron 35.0%
ATAAAGTAAGTGTGTGGAGA+TGG + Chr8:8422789-8422808 MsG0880042415.01.T01:intron 35.0%
ATAGACAGGAACTTTAGATG+CGG + Chr8:8426340-8426359 MsG0880042415.01.T01:intron 35.0%
ATCAGGTTTAGATCACACTA+TGG - Chr8:8425478-8425497 None:intergenic 35.0%
ATGGTAAATTCAACAGTCTG+TGG + Chr8:8427271-8427290 MsG0880042415.01.T01:CDS 35.0%
ATGGTGAACTTAACAGTCTT+TGG + Chr8:8424962-8424981 MsG0880042415.01.T01:CDS 35.0%
ATTGAAGAATCAGTGAGTAG+AGG - Chr8:8424640-8424659 None:intergenic 35.0%
CAAACAAGGTGGCTTAAATT+TGG - Chr8:8426660-8426679 None:intergenic 35.0%
CAAATAACCAACACACAAGT+TGG - Chr8:8424459-8424478 None:intergenic 35.0%
CACTTACTTTATTCTCGTGT+TGG - Chr8:8422781-8422800 None:intergenic 35.0%
CATCAGTGAGGAGAAATATT+AGG + Chr8:8423308-8423327 MsG0880042415.01.T01:intron 35.0%
CCAAACATTATCCCATTAAG+TGG - Chr8:8423135-8423154 None:intergenic 35.0%
CCACTTAATGGGATAATGTT+TGG + Chr8:8423132-8423151 MsG0880042415.01.T01:intron 35.0%
CGCTTCATACATAGGTAATT+AGG + Chr8:8426125-8426144 MsG0880042415.01.T01:intron 35.0%
CTCAATGTTAAAGTTTCTCG+CGG + Chr8:8427213-8427232 MsG0880042415.01.T01:CDS 35.0%
GAAACAGAAGGAAATTCAGA+TGG + Chr8:8425787-8425806 MsG0880042415.01.T01:intron 35.0%
GAATGAAAAACTCATCAGTG+AGG + Chr8:8423296-8423315 MsG0880042415.01.T01:intron 35.0%
GAGATCCTTCTACAAAATGA+TGG + Chr8:8425072-8425091 MsG0880042415.01.T01:CDS 35.0%
GAGGATAGTCATATTACAAG+AGG + Chr8:8422987-8423006 MsG0880042415.01.T01:intron 35.0%
GCATTTGTAGATCAATAGCT+CGG + Chr8:8425662-8425681 MsG0880042415.01.T01:intron 35.0%
GGATGACAAAAGTAAATAGG+TGG + Chr8:8425765-8425784 MsG0880042415.01.T01:intron 35.0%
GGGTTCATAGTACACAATAA+TGG + Chr8:8422586-8422605 MsG0880042415.01.T01:intron 35.0%
TAAAGTAAGTGTGTGGAGAT+GGG + Chr8:8422790-8422809 MsG0880042415.01.T01:intron 35.0%
TATTACCTGTGTCAACATGT+CGG + Chr8:8425356-8425375 MsG0880042415.01.T01:intron 35.0%
TCAAACATAGAGGTGAAAGT+TGG + Chr8:8422497-8422516 MsG0880042415.01.T01:intron 35.0%
TCACTCTTAGTTGAACTCTT+AGG - Chr8:8427681-8427700 None:intergenic 35.0%
TGAAGCACATAATCTGATAG+AGG - Chr8:8427972-8427991 None:intergenic 35.0%
TGCAAGTTGTTCCAAATTCA+TGG + Chr8:8425744-8425763 MsG0880042415.01.T01:intron 35.0%
TGCAGTAAAAGAATCACCAA+TGG - Chr8:8424699-8424718 None:intergenic 35.0%
TGGTAAATTCAACAGTCTGT+GGG + Chr8:8427272-8427291 MsG0880042415.01.T01:CDS 35.0%
TGGTGAACTTAACAGTCTTT+GGG + Chr8:8424963-8424982 MsG0880042415.01.T01:CDS 35.0%
TGTACTTATACTGTTAGTGC+AGG + Chr8:8427738-8427757 MsG0880042415.01.T01:CDS 35.0%
TGTGGTAGTTGATCATGAAA+TGG - Chr8:8423217-8423236 None:intergenic 35.0%
TTTCTTTAACCACATTGGAG+TGG + Chr8:8425586-8425605 MsG0880042415.01.T01:CDS 35.0%
TTTGAGTGGAAGAAAACCAA+AGG - Chr8:8427019-8427038 None:intergenic 35.0%
TTTGTATCCTTGTGTAGACT+TGG - Chr8:8424498-8424517 None:intergenic 35.0%
! AAGAAGCCATGTTTAGAATG+TGG - Chr8:8426852-8426871 None:intergenic 35.0%
! ACCAATCGCTATAGTACTTT+TGG - Chr8:8424684-8424703 None:intergenic 35.0%
! ATACCACACAACAGTTTTCT+CGG - Chr8:8427085-8427104 None:intergenic 35.0%
! GAACTCGTTTTACAAAGTGA+TGG + Chr8:8427402-8427421 MsG0880042415.01.T01:CDS 35.0%
! GTATGTCTTGTATCAAGTTG+TGG + Chr8:8428288-8428307 MsG0880042415.01.T01:three_prime_UTR 35.0%
!! ACACACAAGTTGGTATACTT+TGG - Chr8:8424449-8424468 None:intergenic 35.0%
!! ACCAAAAGTACTATAGCGAT+TGG + Chr8:8424680-8424699 MsG0880042415.01.T01:intron 35.0%
!! AGATTTTGATCGACACTGAT+TGG + Chr8:8427946-8427965 MsG0880042415.01.T01:CDS 35.0%
!! AGTTCCACTTTTGATCCTTT+TGG - Chr8:8427129-8427148 None:intergenic 35.0%
!! AGTTGGTATACTTTGGAGTT+TGG - Chr8:8424442-8424461 None:intergenic 35.0%
!! ATCAGGGTACTTGTATGTTT+TGG + Chr8:8427542-8427561 MsG0880042415.01.T01:CDS 35.0%
!! CAACTTGTGTGTTGGTTATT+TGG + Chr8:8424457-8424476 MsG0880042415.01.T01:intron 35.0%
!! CAATTAGTCTTTGACAGATC+AGG + Chr8:8425203-8425222 MsG0880042415.01.T01:intron 35.0%
!! CAATTGGTCTTTGACAAATC+AGG + Chr8:8427525-8427544 MsG0880042415.01.T01:CDS 35.0%
!! CTCTAAATAAGTTGGTTAGC+AGG + Chr8:8428212-8428231 MsG0880042415.01.T01:three_prime_UTR 35.0%
!! CTTTTGTTTGAGTAGAAGCA+TGG + Chr8:8422438-8422457 MsG0880042415.01.T01:intron 35.0%
!! GCTCAGTGCTTTAATTTTGA+TGG + Chr8:8426779-8426798 MsG0880042415.01.T01:intron 35.0%
!! GTTGATTTGTTGTGTAGACT+TGG - Chr8:8424051-8424070 None:intergenic 35.0%
!! TAGTTTTACAGGGTTCAAGT+TGG - Chr8:8426289-8426308 None:intergenic 35.0%
!! TCAGGGTACTTGTATGTTTT+GGG + Chr8:8427543-8427562 MsG0880042415.01.T01:CDS 35.0%
!! TCGGTGCTTCATAATTTTGA+TGG + Chr8:8425398-8425417 MsG0880042415.01.T01:intron 35.0%
!! TGCTCTAAGATAGAATTGTG+TGG - Chr8:8427619-8427638 None:intergenic 35.0%
!!! TGAGGATGGTTTTAGGTATA+CGG + Chr8:8425866-8425885 MsG0880042415.01.T01:intron 35.0%
AAAGTAAGTGTGTGGAGATG+GGG + Chr8:8422791-8422810 MsG0880042415.01.T01:intron 40.0%
AAGACTTCAACTGAGAGTGA+AGG + Chr8:8425447-8425466 MsG0880042415.01.T01:intron 40.0%
AATCAGTGAGTAGAGGAGAA+AGG - Chr8:8424633-8424652 None:intergenic 40.0%
AATCAGTGAGTAGAGGAGAA+GGG - Chr8:8424633-8424652 None:intergenic 40.0%
ACATGCCTTAGATCATTCAG+AGG - Chr8:8425263-8425282 None:intergenic 40.0%
ACTGTTGTGTGGTATGCTAA+TGG + Chr8:8427090-8427109 MsG0880042415.01.T01:CDS 40.0%
AGAAACTCACTGCCAATGAT+GGG + Chr8:8424833-8424852 MsG0880042415.01.T01:CDS 40.0%
ATCAGTGAGTAGAGGAGAAA+GGG - Chr8:8426883-8426902 None:intergenic 40.0%
ATCATTGGTACGAAAATGGC+CGG + Chr8:8425925-8425944 MsG0880042415.01.T01:CDS 40.0%
ATGAATCATATGGCCCGAAT+TGG + Chr8:8424573-8424592 MsG0880042415.01.T01:intron 40.0%
ATTACCTATGTATGAAGCGC+AGG - Chr8:8426124-8426143 None:intergenic 40.0%
ATTGCAGAATCAGTGAGTAG+AGG - Chr8:8426891-8426910 None:intergenic 40.0%
CAACATTGTAGGGATAGTTG+GGG + Chr8:8422864-8422883 MsG0880042415.01.T01:intron 40.0%
CATACATAGGTAATTAGGCC+AGG + Chr8:8426130-8426149 MsG0880042415.01.T01:intron 40.0%
CCTTTATCCACAACTTGAGA+AGG - Chr8:8427330-8427349 None:intergenic 40.0%
CTACACTGCTCTTCAGTAAA+AGG - Chr8:8427999-8428018 None:intergenic 40.0%
CTCAAACCTTAGATGTAGCT+TGG + Chr8:8423647-8423666 MsG0880042415.01.T01:intron 40.0%
GACAACATTGTAGGGATAGT+TGG + Chr8:8422862-8422881 MsG0880042415.01.T01:intron 40.0%
GCACATCCTTGTATGAAATC+TGG - Chr8:8427882-8427901 None:intergenic 40.0%
GCAGTGTAGGAAATCTTGTA+TGG + Chr8:8428010-8428029 MsG0880042415.01.T01:CDS 40.0%
GGACCAAATTGGAAGACTAA+TGG + Chr8:8426757-8426776 MsG0880042415.01.T01:intron 40.0%
GGATGATTGTTTGTGTTCTG+TGG + Chr8:8428031-8428050 MsG0880042415.01.T01:CDS 40.0%
GTCAGGTTATGGAATACTGA+AGG + Chr8:8427189-8427208 MsG0880042415.01.T01:CDS 40.0%
GTTCAACTAAGAGTGAAGGT+TGG + Chr8:8427685-8427704 MsG0880042415.01.T01:CDS 40.0%
TATACTGTTAGTGCAGGTAG+TGG + Chr8:8427744-8427763 MsG0880042415.01.T01:CDS 40.0%
TCACTCTCAGTTGAAGTCTT+TGG - Chr8:8425447-8425466 None:intergenic 40.0%
TCAGGTTAGGTGATAGTTGT+TGG + Chr8:8428060-8428079 MsG0880042415.01.T01:CDS 40.0%
TCCATAACCTGACACCATTT+GGG - Chr8:8427182-8427201 None:intergenic 40.0%
TCTTTGTTCTGACAACTGTC+TGG - Chr8:8422725-8422744 None:intergenic 40.0%
TGCAAGCCAGATTTCATACA+AGG + Chr8:8427873-8427892 MsG0880042415.01.T01:CDS 40.0%
TGCACCAAAAGGATCAAAAG+TGG + Chr8:8427122-8427141 MsG0880042415.01.T01:CDS 40.0%
TGGCATCATTGGTACGAAAA+TGG + Chr8:8425921-8425940 MsG0880042415.01.T01:CDS 40.0%
TGTAGTCAAGCCCACTTAAT+GGG + Chr8:8423121-8423140 MsG0880042415.01.T01:intron 40.0%
TGTGGTGTGTTCAATGACAT+TGG + Chr8:8424922-8424941 MsG0880042415.01.T01:CDS 40.0%
TTCCATAACCTGACACCATT+TGG - Chr8:8427183-8427202 None:intergenic 40.0%
TTCCATAGCATGTCACCATT+TGG - Chr8:8424874-8424893 None:intergenic 40.0%
TTTCCGAGAAAACTGTTGTG+TGG + Chr8:8427079-8427098 MsG0880042415.01.T01:CDS 40.0%
! ACCAATGGCTATGGTACTTT+TGG - Chr8:8426935-8426954 None:intergenic 40.0%
! ATCAGGGTACTTGTATGTCT+TGG + Chr8:8425220-8425239 MsG0880042415.01.T01:intron 40.0%
! ATTAAGTGGGCTTGACTACA+CGG - Chr8:8423121-8423140 None:intergenic 40.0%
! CACAAACCAACTCCTTTTCA+TGG + Chr8:8424717-8424736 MsG0880042415.01.T01:intron 40.0%
! CCTTCTCAAGTTGTGGATAA+AGG + Chr8:8427327-8427346 MsG0880042415.01.T01:CDS 40.0%
! CTAATTTGTGACAGGTATGG+TGG - Chr8:8428181-8428200 None:intergenic 40.0%
! CTTAGATCATTCAGAGGTGT+CGG - Chr8:8425257-8425276 None:intergenic 40.0%
! CTTGGTGATAGAGTTTCTTG+TGG + Chr8:8424904-8424923 MsG0880042415.01.T01:CDS 40.0%
! CTTGTGTAAAGTGGACTTTC+AGG - Chr8:8426561-8426580 None:intergenic 40.0%
! CTTTTACTGAAGAGCAGTGT+AGG + Chr8:8427997-8428016 MsG0880042415.01.T01:CDS 40.0%
! TCAGGGTACTTGTATGTCTT+GGG + Chr8:8425221-8425240 MsG0880042415.01.T01:intron 40.0%
! TCTATGTATGAAGTGCTTCC+TGG - Chr8:8426151-8426170 None:intergenic 40.0%
! TGAATGATCTAAGGCATGTC+TGG + Chr8:8425264-8425283 MsG0880042415.01.T01:intron 40.0%
! TGCAACTCTTAATGGTGCTA+AGG + Chr8:8428116-8428135 MsG0880042415.01.T01:exon 40.0%
!! ACCAAAAGTACCATAGCCAT+TGG + Chr8:8426931-8426950 MsG0880042415.01.T01:CDS 40.0%
!! ACTTTTGATCCTTTTGGTGC+AGG - Chr8:8427123-8427142 None:intergenic 40.0%
!! GAGCCATTAGTCTTCCAATT+TGG - Chr8:8426763-8426782 None:intergenic 40.0%
!! TGTGTTCTGTGGCTATTTTC+AGG + Chr8:8428042-8428061 MsG0880042415.01.T01:CDS 40.0%
!!! GTTTTCAGGTGTGTCATGTT+TGG - Chr8:8426214-8426233 None:intergenic 40.0%
!!! TCTGTGGCTATTTTCAGGTT+AGG + Chr8:8428047-8428066 MsG0880042415.01.T01:CDS 40.0%
AAAGGGCTTAGACCATACTG+TGG - Chr8:8427712-8427731 None:intergenic 45.0%
AACAACCTGAGAAGGCAAGA+AGG - Chr8:8425013-8425032 None:intergenic 45.0%
ACAACTTGACCACTCCAATG+TGG - Chr8:8425598-8425617 None:intergenic 45.0%
ACATGACAGAAGAAGAGGTG+AGG + Chr8:8425848-8425867 MsG0880042415.01.T01:intron 45.0%
AGCCTTTCAACAACCTGAGA+AGG - Chr8:8425021-8425040 None:intergenic 45.0%
AGTCGAGGCAGGAATTGAAT+GGG + Chr8:8422377-8422396 MsG0880042415.01.T01:CDS 45.0%
AGTTAGCACCAACCCATCAT+TGG - Chr8:8427157-8427176 None:intergenic 45.0%
ATCAGTGAGTAGAGGAGAAG+GGG - Chr8:8424632-8424651 None:intergenic 45.0%
CACAACTTGAGAAGGCAACA+AGG - Chr8:8427322-8427341 None:intergenic 45.0%
CAGCTGCCATATGGATCATT+AGG - Chr8:8427855-8427874 None:intergenic 45.0%
CATTGGAAACTCTGTGCTTG+AGG + Chr8:8424939-8424958 MsG0880042415.01.T01:CDS 45.0%
CCATAACCTGACACCATTTG+GGG - Chr8:8427181-8427200 None:intergenic 45.0%
CGACACCTCTGAATGATCTA+AGG + Chr8:8425255-8425274 MsG0880042415.01.T01:intron 45.0%
CTATGTATGAAGCGCAGGAA+AGG - Chr8:8426119-8426138 None:intergenic 45.0%
CTCCAAATGGTGACATGCTA+TGG + Chr8:8424869-8424888 MsG0880042415.01.T01:CDS 45.0%
CTTCAACTGAGAGTGAAGGT+TGG + Chr8:8425451-8425470 MsG0880042415.01.T01:intron 45.0%
CTTTCCTGCGCTTCATACAT+AGG + Chr8:8426117-8426136 MsG0880042415.01.T01:intron 45.0%
GAAGAGTTTGCCGCTCATTT+GGG + Chr8:8423696-8423715 MsG0880042415.01.T01:intron 45.0%
GAATCAGTGAGTAGAGGAGA+AGG - Chr8:8424634-8424653 None:intergenic 45.0%
GACCATGGACTTGTGTAAAG+TGG - Chr8:8426570-8426589 None:intergenic 45.0%
GACTAATTGAGTTCCAGCAC+TGG - Chr8:8425192-8425211 None:intergenic 45.0%
GAGAAACTCACTGCCAATGA+TGG + Chr8:8424832-8424851 MsG0880042415.01.T01:CDS 45.0%
GAGTTGACCAAGTCTACACA+AGG + Chr8:8424041-8424060 MsG0880042415.01.T01:intron 45.0%
GCAAAGAAGGTTGGCATCAT+TGG + Chr8:8425910-8425929 MsG0880042415.01.T01:CDS 45.0%
GCAGGAATTGAATGGGATGT+AGG + Chr8:8422384-8422403 MsG0880042415.01.T01:CDS 45.0%
GCATGTCCAAGCTACATCTA+AGG - Chr8:8423656-8423675 None:intergenic 45.0%
GGTTTGAGCTACAACACTGA+TGG - Chr8:8424663-8424682 None:intergenic 45.0%
GTCCACTTTACACAAGTCCA+TGG + Chr8:8426565-8426584 MsG0880042415.01.T01:intron 45.0%
GTGTAGTCAAGCCCACTTAA+TGG + Chr8:8423120-8423139 MsG0880042415.01.T01:intron 45.0%
GTTTAAGCGCGGAAGATACT+TGG + Chr8:8423750-8423769 MsG0880042415.01.T01:intron 45.0%
TAAACGCGGAGATTAACCCT+TGG - Chr8:8423735-8423754 None:intergenic 45.0%
TAACTTCCCCAAATGGTGTC+AGG + Chr8:8427172-8427191 MsG0880042415.01.T01:CDS 45.0%
TGAAGAGTTTGCCGCTCATT+TGG + Chr8:8423695-8423714 MsG0880042415.01.T01:intron 45.0%
TGGAACTCACTGCCAATGAT+GGG + Chr8:8427142-8427161 MsG0880042415.01.T01:CDS 45.0%
TTAACCCTTGGAGCCTTTGT+CGG - Chr8:8423723-8423742 None:intergenic 45.0%
TTAATCTCCGCGTTTAAGCG+CGG + Chr8:8423739-8423758 MsG0880042415.01.T01:intron 45.0%
TTGTGCTTCACTTGCCCAAA+TGG + Chr8:8425614-8425633 MsG0880042415.01.T01:CDS 45.0%
! CTACATCTAAGGTTTGAGCC+GGG - Chr8:8423645-8423664 None:intergenic 45.0%
! CTTGTTGCCTTCTCAAGTTG+TGG + Chr8:8427320-8427339 MsG0880042415.01.T01:CDS 45.0%
! GAAGAGGTGAGGATGGTTTT+AGG + Chr8:8425859-8425878 MsG0880042415.01.T01:intron 45.0%
! GACAGGTATGGTGGAACTAT+GGG - Chr8:8428172-8428191 None:intergenic 45.0%
! GCTACATCTAAGGTTTGAGC+CGG - Chr8:8423646-8423665 None:intergenic 45.0%
! TGACAGGTATGGTGGAACTA+TGG - Chr8:8428173-8428192 None:intergenic 45.0%
! TGCCTTCTCAGGTTGTTGAA+AGG + Chr8:8425016-8425035 MsG0880042415.01.T01:CDS 45.0%
!! ATCAAGTGCTGGAGCTCAAT+TGG + Chr8:8427509-8427528 MsG0880042415.01.T01:CDS 45.0%
!! ATGAAGCACCGACATAGACA+CGG - Chr8:8425390-8425409 None:intergenic 45.0%
!! CGTTTCTAAGACTTGACTCC+AGG - Chr8:8422413-8422432 None:intergenic 45.0%
!! TTGGTGCTAACTTCCCCAAA+TGG + Chr8:8427165-8427184 MsG0880042415.01.T01:CDS 45.0%
!!! GGATGGTTTTAGGTATACGG+TGG + Chr8:8425869-8425888 MsG0880042415.01.T01:intron 45.0%
!! ATATTATTATAAATTATAGT+AGG - Chr8:8426491-8426510 None:intergenic 5.0%
!!! ATATTTATTTTCTATAAAAA+TGG + Chr8:8423958-8423977 MsG0880042415.01.T01:intron 5.0%
!!! TATTTATTTTCTATAAAAAT+GGG + Chr8:8423959-8423978 MsG0880042415.01.T01:intron 5.0%
AAGCAACCATGGAGATGTGC+TGG - Chr8:8426977-8426996 None:intergenic 50.0%
ACATGCTATGGAACCCTGAG+GGG + Chr8:8424881-8424900 MsG0880042415.01.T01:CDS 50.0%
AGATCCAGTACATCCAGTGC+TGG + Chr8:8425176-8425195 MsG0880042415.01.T01:intron 50.0%
AGCTCCAGCACTTGATGTAC+TGG - Chr8:8427505-8427524 None:intergenic 50.0%
ATTGGTACGAAAATGGCCGG+AGG + Chr8:8425928-8425947 MsG0880042415.01.T01:CDS 50.0%
CAACACCGACATGTTGACAC+AGG - Chr8:8425364-8425383 None:intergenic 50.0%
CACTGGCAACTTTGTGCTTC+AGG + Chr8:8427248-8427267 MsG0880042415.01.T01:CDS 50.0%
CCAAAGGCAAAGTCACCAGA+AGG - Chr8:8427003-8427022 None:intergenic 50.0%
CCAGAAGGTGAAAGCAACCA+TGG - Chr8:8426988-8427007 None:intergenic 50.0%
CCTTCTGGTGACTTTGCCTT+TGG + Chr8:8427000-8427019 MsG0880042415.01.T01:CDS 50.0%
CGCGGTGTATTGAATGACAC+TGG + Chr8:8427231-8427250 MsG0880042415.01.T01:CDS 50.0%
CTTTGTCGGACCCAAATGAG+CGG - Chr8:8423709-8423728 None:intergenic 50.0%
GACAGAAGAAGAGGTGAGGA+TGG + Chr8:8425852-8425871 MsG0880042415.01.T01:intron 50.0%
GACATGCTATGGAACCCTGA+GGG + Chr8:8424880-8424899 MsG0880042415.01.T01:CDS 50.0%
GAGTCGAGGCAGGAATTGAA+TGG + Chr8:8422376-8422395 MsG0880042415.01.T01:CDS 50.0%
GCACGGGTCCAAAATCTAGT+AGG + Chr8:8423274-8423293 MsG0880042415.01.T01:intron 50.0%
GGAAACTCTGTGCTTGAGGA+TGG + Chr8:8424943-8424962 MsG0880042415.01.T01:CDS 50.0%
GGATCCAGTACATCAAGTGC+TGG + Chr8:8427498-8427517 MsG0880042415.01.T01:CDS 50.0%
GGCAACTTTGTGCTTCAGGA+TGG + Chr8:8427252-8427271 MsG0880042415.01.T01:CDS 50.0%
GGTTAGCAGGTGTTAGATGC+TGG + Chr8:8428225-8428244 MsG0880042415.01.T01:three_prime_UTR 50.0%
GGTTTGAGCTACAGCACAGA+TGG - Chr8:8426914-8426933 None:intergenic 50.0%
GTATCTTCCGCGCTTAAACG+CGG - Chr8:8423749-8423768 None:intergenic 50.0%
GTGAAGGTTGGACCACAGTA+TGG + Chr8:8427697-8427716 MsG0880042415.01.T01:CDS 50.0%
GTGGAACTCACTGCCAATGA+TGG + Chr8:8427141-8427160 MsG0880042415.01.T01:CDS 50.0%
TGAATGGGATGTAGGAGACC+TGG + Chr8:8422392-8422411 MsG0880042415.01.T01:CDS 50.0%
TGACATGCTATGGAACCCTG+AGG + Chr8:8424879-8424898 MsG0880042415.01.T01:CDS 50.0%
TGTTGCGTCCGTGTCTATGT+CGG + Chr8:8425379-8425398 MsG0880042415.01.T01:intron 50.0%
! AGGTATGGTGGAACTATGGG+AGG - Chr8:8428169-8428188 None:intergenic 50.0%
! AGTGCAGGTAGTGGTGTTTG+TGG + Chr8:8427753-8427772 MsG0880042415.01.T01:CDS 50.0%
! AGTTCCAGCACTGGATGTAC+TGG - Chr8:8425183-8425202 None:intergenic 50.0%
! CCATGGTTGCTTTCACCTTC+TGG + Chr8:8426985-8427004 MsG0880042415.01.T01:CDS 50.0%
! CCCCAAATGGTGTCAGGTTA+TGG + Chr8:8427178-8427197 MsG0880042415.01.T01:CDS 50.0%
! CTGGTGCTAGCTTCTCCAAA+TGG + Chr8:8424856-8424875 MsG0880042415.01.T01:CDS 50.0%
!! AACATGTGTCGGTGTCGTGT+TGG - Chr8:8425310-8425329 None:intergenic 50.0%
!! ACATGTGTCGGTGTCGTGTT+GGG - Chr8:8425309-8425328 None:intergenic 50.0%
!! ACTCACTGCCAATGATGGGT+TGG + Chr8:8427146-8427165 MsG0880042415.01.T01:CDS 50.0%
!! GAAGGCAACAAGGTGTCACT+AGG - Chr8:8427312-8427331 None:intergenic 50.0%
!!! GGTTTTAGGTATACGGTGGC+CGG + Chr8:8425873-8425892 MsG0880042415.01.T01:intron 50.0%
AAGACGACAGGGTGAGTCTC+TGG + Chr8:8425967-8425986 MsG0880042415.01.T01:intron 55.0%
ACTCTATCACCAAGCCCCTC+AGG - Chr8:8424898-8424917 None:intergenic 55.0%
AGAGACTCACCCTGTCGTCT+TGG - Chr8:8425968-8425987 None:intergenic 55.0%
AGCTAGCACCAGCCCATCAT+TGG - Chr8:8424848-8424867 None:intergenic 55.0%
CACAAGCCAGCACATCTCCA+TGG + Chr8:8426968-8426987 MsG0880042415.01.T01:CDS 55.0%
CGCTCATTTGGGTCCGACAA+AGG + Chr8:8423707-8423726 MsG0880042415.01.T01:intron 55.0%
CTCTATCACCAAGCCCCTCA+GGG - Chr8:8424897-8424916 None:intergenic 55.0%
GAGGAGAAGGGGAAGTAGAG+AGG - Chr8:8424621-8424640 None:intergenic 55.0%
GGAGACAGTCCTGCACCAAA+AGG + Chr8:8427111-8427130 MsG0880042415.01.T01:CDS 55.0%
GGGATGTTGCGTTGGATGTG+TGG + Chr8:8422811-8422830 MsG0880042415.01.T01:intron 55.0%
TCAACTTCCCGTGCATCGCA+CGG + Chr8:8423257-8423276 MsG0880042415.01.T01:intron 55.0%
TGACGCCTTCTTGCCTTCTC+AGG + Chr8:8425005-8425024 MsG0880042415.01.T01:CDS 55.0%
TGGAGATGGGGATGTTGCGT+TGG + Chr8:8422803-8422822 MsG0880042415.01.T01:intron 55.0%
TGTTGGGGACTGACACGTGT+CGG - Chr8:8425293-8425312 None:intergenic 55.0%
! TCTGGCTTGCAGCTGCCATA+TGG - Chr8:8427864-8427883 None:intergenic 55.0%
! TTTTGGACCCGTGCGATGCA+CGG - Chr8:8423268-8423287 None:intergenic 55.0%
!! ACTCACTGCCAATGATGGGC+TGG + Chr8:8424837-8424856 MsG0880042415.01.T01:CDS 55.0%
!! CATGTGTCGGTGTCGTGTTG+GGG - Chr8:8425308-8425327 None:intergenic 55.0%
ACCTTCTTTGCCACACCGCC+CGG - Chr8:8425901-8425920 None:intergenic 60.0%
CAACTTCCCGTGCATCGCAC+GGG + Chr8:8423258-8423277 MsG0880042415.01.T01:intron 60.0%
CTATGGAACCCTGAGGGGCT+TGG + Chr8:8424886-8424905 MsG0880042415.01.T01:CDS 60.0%
GGAGTGGCTCCAAGACGACA+GGG + Chr8:8425956-8425975 MsG0880042415.01.T01:CDS 60.0%
GGCGGTGTGGCAAAGAAGGT+TGG + Chr8:8425901-8425920 MsG0880042415.01.T01:CDS 60.0%
GGGTCCGACAAAGGCTCCAA+GGG + Chr8:8423716-8423735 MsG0880042415.01.T01:intron 60.0%
TGGAGTGGCTCCAAGACGAC+AGG + Chr8:8425955-8425974 MsG0880042415.01.T01:CDS 60.0%
TGGGTCCGACAAAGGCTCCA+AGG + Chr8:8423715-8423734 MsG0880042415.01.T01:intron 60.0%
TTTGGACCCGTGCGATGCAC+GGG - Chr8:8423267-8423286 None:intergenic 60.0%
CGAAAATGGCCGGAGGCAGC+TGG + Chr8:8425935-8425954 MsG0880042415.01.T01:CDS 65.0%
AGGTATACGGTGGCCGGCGC+CGG + Chr8:8425879-8425898 MsG0880042415.01.T01:intron 70.0%
ATGGCCGGAGGCAGCTGGAG+TGG + Chr8:8425940-8425959 MsG0880042415.01.T01:CDS 70.0%
GCCGGGCGGTGTGGCAAAGA+AGG + Chr8:8425897-8425916 MsG0880042415.01.T01:CDS 70.0%
GGAGCCACTCCAGCTGCCTC+CGG - Chr8:8425947-8425966 None:intergenic 70.0%
GGTATACGGTGGCCGGCGCC+GGG + Chr8:8425880-8425899 MsG0880042415.01.T01:intron 75.0%
TTTGCCACACCGCCCGGCGC+CGG - Chr8:8425895-8425914 None:intergenic 75.0%
!! ATACGGTGGCCGGCGCCGGG+CGG + Chr8:8425883-8425902 MsG0880042415.01.T01:CDS 80.0%
!! GTGGCCGGCGCCGGGCGGTG+TGG + Chr8:8425888-8425907 MsG0880042415.01.T01:CDS 90.0%
Chromosome Type Strat End Strand Name
Chr8 gene 8422369 8428366 8422369 ID=MsG0880042415.01;Name=MsG0880042415.01
Chr8 mRNA 8422369 8428366 8422369 ID=MsG0880042415.01.T01;Parent=MsG0880042415.01;Name=MsG0880042415.01.T01;_AED=0.39;_eAED=0.40;_QI=0|0.2|0.16|0.66|1|1|6|239|620
Chr8 exon 8426926 8428366 8426926 ID=MsG0880042415.01.T01:exon:699;Parent=MsG0880042415.01.T01
Chr8 exon 8425881 8425977 8425881 ID=MsG0880042415.01.T01:exon:698;Parent=MsG0880042415.01.T01
Chr8 exon 8425526 8425635 8425526 ID=MsG0880042415.01.T01:exon:697;Parent=MsG0880042415.01.T01
Chr8 exon 8424771 8425093 8424771 ID=MsG0880042415.01.T01:exon:696;Parent=MsG0880042415.01.T01
Chr8 exon 8422726 8422793 8422726 ID=MsG0880042415.01.T01:exon:695;Parent=MsG0880042415.01.T01
Chr8 exon 8422369 8422431 8422369 ID=MsG0880042415.01.T01:exon:694;Parent=MsG0880042415.01.T01
Chr8 CDS 8422369 8422431 8422369 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 CDS 8422726 8422793 8422726 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 CDS 8424771 8425093 8424771 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 CDS 8425526 8425635 8425526 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 CDS 8425881 8425977 8425881 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 CDS 8426926 8428127 8426926 ID=MsG0880042415.01.T01:cds;Parent=MsG0880042415.01.T01
Chr8 three_prime_UTR 8428128 8428366 8428128 ID=MsG0880042415.01.T01:three_prime_utr;Parent=MsG0880042415.01.T01
Gene Sequence

>MsG0880042415.01.T01

ATGAAAAGAGTCGAGGCAGGAATTGAATGGGATGTAGGAGACCTGGAGTCAAGTCTTAGAAACACAGTTGTCAGAACAAAGATGTTTTATGGAACAAAGTATTGGCTGTTAAGAACCAACACGAGAATAAAGTTTTCTTCTACTAAAAGATACCATGTTTTTTTGCTTTCCATTTGGTATGCAAACATTTCTGAGAAACTCACTGCCAATGATGGGCTGGTGCTAGCTTCTCCAAATGGTGACATGCTATGGAACCCTGAGGGGCTTGGTGATAGAGTTTCTTGTGGTGTGTTCAATGACATTGGAAACTCTGTGCTTGAGGATGGTGAACTTAACAGTCTTTGGGAGACTTTCAAGTTTTCTAGTGACGCCTTCTTGCCTTCTCAGGTTGTTGAAAGGCTTAAAGAGACTAATTTCAGTAAAGGAAGGTGTGAGATCCTTCTACAAAATGATGGTAGTGATGTTTGTGGATATAACACCTACTGCAAATTTTATAATTGTGGATGTGCTTCATTTTCTTTAACCACATTGGAGTGGTCAAGTTGTGCTTCACTTGCCCAAATGGTATACGGTGGCCGGCGCCGGGCGGTGTGGCAAAGAAGGTTGGCATCATTGGTACGAAAATGGCCGGAGGCAGCTGGAGTGGCTCCAAGACGACAGGCTCAAACCAAAAGTACCATAGCCATTGGTGATTCTTTTACTGCACAAGCCAGCACATCTCCATGGTTGCTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTTCCACTCAAAGACACTAATCTTTTTTTGCTTTCAATTTGGTATCCCAAAATTTCCGAGAAAACTGTTGTGTGGTATGCTAATGGAGACAGTCCTGCACCAAAAGGATCAAAAGTGGAACTCACTGCCAATGATGGGTTGGTGCTAACTTCCCCAAATGGTGTCAGGTTATGGAATACTGAAGGACTCAATGTTAAAGTTTCTCGCGGTGTATTGAATGACACTGGCAACTTTGTGCTTCAGGATGGTAAATTCAACAGTCTGTGGGAGACTTTCAAGTTTCCTAGTGACACCTTGTTGCCTTCTCAAGTTGTGGATAAAGGAAGAAAGCTTTCTTCAAGGTTTAAGGAGACAGATTTCAGTAAAGGAAGGTTTGAACTCGTTTTACAAAGTGATGGTAATCTTGTTATGCATTCTATTAATTTACCATCTGGTTATGTTAATGAAAACTACTTTGAAAGTAATACTGTTGGATCCAGTACATCAAGTGCTGGAGCTCAATTGGTCTTTGACAAATCAGGGTACTTGTATGTTTTGGGAGAGAACAATGAGAAATATAATGTGTTTGAAGAAGAGAGTAACGTCTCGACCACACAATTCTATCTTAGAGCAACTCTTAATTTTGATGGAGTGTTCACACTTTACAAGCATCCTAAGAGTTCAACTAAGAGTGAAGGTTGGACCACAGTATGGTCTAAGCCCTTTAATATATGTACTTATACTGTTAGTGCAGGTAGTGGTGTTTGTGGATATAATAGCTTCTGCACTTTGGGAGTTGATAAGAGACCAAAATGTCAATGTCCAAAACATTACTCACTGATTGATCCTAATGATCCATATGGCAGCTGCAAGCCAGATTTCATACAAGGATGTGCAGAAGATGATCCAAGTAAAAAGAGAAATGATCTCTATGAGTTCGAGATTTTGATCGACACTGATTGGCCTCTATCAGATTATGTGCTTCAAAGGCCTTTTACTGAAGAGCAGTGTAGGAAATCTTGTATGGATGATTGTTTGTGTTCTGTGGCTATTTTCAGGTTAGGTGATAGTTGTTGGAAGAAGAAGTTACCACTTTCAAATGATAGTTGTTGCAACTCTTAA

Protein sequence

>MsG0880042415.01.T01

MKRVEAGIEWDVGDLESSLRNTVVRTKMFYGTKYWLLRTNTRIKFSSTKRYHVFLLSIWYANISEKLTANDGLVLASPNGDMLWNPEGLGDRVSCGVFNDIGNSVLEDGELNSLWETFKFSSDAFLPSQVVERLKETNFSKGRCEILLQNDGSDVCGYNTYCKFYNCGCASFSLTTLEWSSCASLAQMVYGGRRRAVWQRRLASLVRKWPEAAGVAPRRQAQTKSTIAIGDSFTAQASTSPWLLSPSGDFAFGFLPLKDTNLFLLSIWYPKISEKTVVWYANGDSPAPKGSKVELTANDGLVLTSPNGVRLWNTEGLNVKVSRGVLNDTGNFVLQDGKFNSLWETFKFPSDTLLPSQVVDKGRKLSSRFKETDFSKGRFELVLQSDGNLVMHSINLPSGYVNENYFESNTVGSSTSSAGAQLVFDKSGYLYVLGENNEKYNVFEEESNVSTTQFYLRATLNFDGVFTLYKHPKSSTKSEGWTTVWSKPFNICTYTVSAGSGVCGYNSFCTLGVDKRPKCQCPKHYSLIDPNDPYGSCKPDFIQGCAEDDPSKKRNDLYEFEILIDTDWPLSDYVLQRPFTEEQCRKSCMDDCLCSVAIFRLGDSCWKKKLPLSNDSCCNS*