AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028422.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028422.01.T01 MTR_5g470730 79.511 327 67 0 1 327 1 327 0.0 542
MsG0580028422.01.T01 MTR_5g070710 79.692 325 64 1 3 327 2 324 0.0 530
MsG0580028422.01.T01 MTR_5g070850 75.229 327 81 0 1 327 1 327 0.0 525
MsG0580028422.01.T01 MTR_5g070920 80.428 327 63 1 1 327 1 326 0.0 515
MsG0580028422.01.T01 MTR_5g070700 79.448 326 67 0 1 326 1 326 0.0 512
MsG0580028422.01.T01 MTR_5g070690 78.750 320 68 0 8 327 6 325 0.0 510
MsG0580028422.01.T01 MTR_5g070800 78.750 320 68 0 8 327 6 325 0.0 510
MsG0580028422.01.T01 MTR_6g084770 60.000 295 115 2 35 327 35 328 1.96e-123 364
MsG0580028422.01.T01 MTR_5g070980 79.476 229 47 0 1 229 1 229 2.61e-122 351
MsG0580028422.01.T01 MTR_5g070830 77.626 219 49 0 109 327 219 437 6.31e-110 333
MsG0580028422.01.T01 MTR_8g104080 59.193 223 89 1 12 232 9 231 1.05e-94 283
MsG0580028422.01.T01 MTR_2g065360 47.333 300 145 4 34 327 4 296 3.18e-88 273
MsG0580028422.01.T01 MTR_8g091690 45.427 328 158 7 6 327 2 314 7.20e-86 266
MsG0580028422.01.T01 MTR_4g104550 44.631 298 149 7 38 328 29 317 1.55e-75 241
MsG0580028422.01.T01 MTR_4g104610 40.476 336 177 9 6 328 1 326 9.40e-73 233
MsG0580028422.01.T01 MTR_3g058240 42.140 299 155 6 38 327 2 291 1.93e-71 229
MsG0580028422.01.T01 MTR_5g018990 38.053 339 182 8 6 327 1 328 4.12e-71 229
MsG0580028422.01.T01 MTR_3g058250 38.623 334 184 7 6 327 1 325 9.53e-71 228
MsG0580028422.01.T01 MTR_4g089020 40.476 294 162 5 38 326 31 316 1.58e-69 225
MsG0580028422.01.T01 MTR_3g058390 38.209 335 184 8 6 327 1 325 2.93e-69 224
MsG0580028422.01.T01 MTR_3g076530 39.628 323 173 9 14 327 18 327 4.69e-69 224
MsG0580028422.01.T01 MTR_3g058400 38.279 337 183 9 4 327 2 326 8.45e-68 221
MsG0580028422.01.T01 MTR_3g057910 38.870 301 165 5 36 327 37 327 9.82e-68 221
MsG0580028422.01.T01 MTR_3g057980 38.272 324 177 6 12 327 12 320 1.47e-67 220
MsG0580028422.01.T01 MTR_3g058210 41.806 299 156 7 38 327 38 327 2.96e-67 219
MsG0580028422.01.T01 MTR_3g057860 37.117 326 192 6 8 327 8 326 3.14e-67 219
MsG0580028422.01.T01 MTR_4g089025 37.798 336 191 8 1 326 14 341 7.04e-67 219
MsG0580028422.01.T01 MTR_3g057800 38.700 323 187 5 8 326 7 322 1.96e-66 217
MsG0580028422.01.T01 MTR_0022s0290 36.795 337 193 7 5 327 10 340 7.46e-66 216
MsG0580028422.01.T01 MTR_4g089055 37.389 337 192 7 1 328 14 340 1.43e-65 215
MsG0580028422.01.T01 MTR_3g058060 40.678 295 161 6 38 325 39 326 1.91e-65 217
MsG0580028422.01.T01 MTR_3g436540 36.111 324 192 4 10 327 16 330 2.06e-65 215
MsG0580028422.01.T01 MTR_5g018980 38.658 313 172 6 29 328 26 331 2.15e-65 214
MsG0580028422.01.T01 MTR_3g058220 36.826 334 190 8 6 327 1 325 2.15e-65 214
MsG0580028422.01.T01 MTR_3g058000 39.189 296 165 6 38 325 39 327 2.97e-65 214
MsG0580028422.01.T01 MTR_4g133750 38.700 323 180 8 13 326 9 322 3.17e-65 214
MsG0580028422.01.T01 MTR_4g089030 38.226 327 189 7 8 326 19 340 3.51e-65 214
MsG0580028422.01.T01 MTR_0554s0020 38.066 331 191 6 6 327 1 326 1.15e-64 213
MsG0580028422.01.T01 MTR_6g462640 35.928 334 193 7 6 327 1 325 1.38e-64 213
MsG0580028422.01.T01 MTR_5g019010 35.347 331 195 7 10 328 5 328 1.61e-64 212
MsG0580028422.01.T01 MTR_3g057900 38.906 329 168 8 12 327 12 320 2.25e-64 211
MsG0580028422.01.T01 MTR_4g104640 42.384 302 153 8 39 328 50 342 2.92e-64 212
MsG0580028422.01.T01 MTR_8g076290 38.721 297 172 5 38 327 36 329 7.29e-64 211
MsG0580028422.01.T01 MTR_8g020940 36.093 302 173 5 38 328 37 329 1.13e-63 210
MsG0580028422.01.T01 MTR_1g442730 39.157 332 182 9 3 325 2 322 1.18e-63 210
MsG0580028422.01.T01 MTR_8g466180 36.747 332 193 6 5 327 2 325 1.51e-63 209
MsG0580028422.01.T01 MTR_1g035190 41.424 309 157 10 29 325 12 308 2.90e-63 208
MsG0580028422.01.T01 MTR_0638s0020 40.000 300 124 5 34 327 4 253 5.33e-63 206
MsG0580028422.01.T01 MTR_5g021390 37.273 330 191 6 6 329 20 339 1.34e-62 207
MsG0580028422.01.T01 MTR_3g057970 38.006 321 175 7 14 327 11 314 2.13e-62 206
MsG0580028422.01.T01 MTR_7g092620 33.951 324 207 3 9 327 8 329 5.24e-62 206
MsG0580028422.01.T01 MTR_3g076560 37.952 332 186 10 3 328 23 340 7.75e-62 206
MsG0580028422.01.T01 MTR_0059s0170 39.759 332 173 11 12 327 6 326 1.36e-61 204
MsG0580028422.01.T01 MTR_6g035100 37.651 332 187 9 2 327 3 320 1.49e-61 204
MsG0580028422.01.T01 MTR_0171s0020 34.911 338 197 8 6 327 1 331 4.87e-61 203
MsG0580028422.01.T01 MTR_5g070685 81.897 116 20 1 1 115 1 116 7.76e-61 190
MsG0580028422.01.T01 MTR_1g023730 38.387 310 164 7 38 327 33 335 1.80e-60 202
MsG0580028422.01.T01 MTR_3g436390 36.455 299 171 5 38 328 37 324 3.06e-60 201
MsG0580028422.01.T01 MTR_4g104660 38.272 324 189 6 10 328 21 338 3.89e-60 201
MsG0580028422.01.T01 MTR_3g058110 37.346 324 185 7 12 325 12 327 4.28e-60 201
MsG0580028422.01.T01 MTR_5g073250 36.824 296 171 7 38 327 39 324 9.97e-60 199
MsG0580028422.01.T01 MTR_8g020950 34.884 301 178 5 38 328 39 331 1.16e-59 199
MsG0580028422.01.T01 MTR_3g025260 37.586 290 167 3 46 326 41 325 4.16e-59 198
MsG0580028422.01.T01 MTR_1g023720 37.419 310 167 7 38 327 33 335 8.99e-59 197
MsG0580028422.01.T01 MTR_5g094660 35.836 293 177 5 38 327 39 323 1.34e-58 196
MsG0580028422.01.T01 MTR_1g035140 37.313 335 192 8 1 327 1 325 1.47e-58 196
MsG0580028422.01.T01 MTR_5g094840 35.736 333 194 7 9 329 8 332 2.02e-58 196
MsG0580028422.01.T01 MTR_0181s0030 33.639 327 203 4 10 327 4 325 2.08e-58 196
MsG0580028422.01.T01 MTR_5g094570 34.451 328 195 8 10 327 7 324 2.65e-58 196
MsG0580028422.01.T01 MTR_6g035115 38.284 303 173 6 29 327 29 321 1.23e-57 194
MsG0580028422.01.T01 MTR_4g071710 33.434 332 200 6 10 327 13 337 1.57e-57 194
MsG0580028422.01.T01 MTR_1g023700 37.217 309 169 7 38 327 34 336 2.11e-57 194
MsG0580028422.01.T01 MTR_6g034965 34.259 324 194 9 12 327 8 320 2.32e-57 193
MsG0580028422.01.T01 MTR_2g010530 37.582 306 171 7 29 327 26 318 3.29e-57 193
MsG0580028422.01.T01 MTR_5g094560 33.333 327 200 7 10 327 7 324 6.65e-57 192
MsG0580028422.01.T01 MTR_8g020960 33.036 336 202 7 6 328 5 330 6.71e-57 192
MsG0580028422.01.T01 MTR_5g094550 33.639 327 199 7 10 327 7 324 1.33e-56 191
MsG0580028422.01.T01 MTR_4g104540 40.840 262 144 6 72 328 1 256 6.19e-56 188
MsG0580028422.01.T01 MTR_7g056103 34.848 330 196 6 6 327 9 327 8.42e-56 189
MsG0580028422.01.T01 MTR_5g073320 35.452 299 172 7 38 327 39 325 8.46e-56 189
MsG0580028422.01.T01 MTR_5g094540 33.435 329 202 7 4 327 8 324 9.91e-56 189
MsG0580028422.01.T01 MTR_3g020780 32.727 330 208 6 4 326 9 331 2.26e-55 188
MsG0580028422.01.T01 MTR_5g094520 34.769 325 196 7 7 326 41 354 1.22e-54 187
MsG0580028422.01.T01 MTR_3g058230 40.927 259 139 5 72 325 1 250 4.04e-54 183
MsG0580028422.01.T01 MTR_4g062500 34.564 298 187 4 38 327 36 333 4.30e-54 185
MsG0580028422.01.T01 MTR_4g025980 34.579 321 189 8 16 327 12 320 4.46e-54 184
MsG0580028422.01.T01 MTR_7g012330 37.624 303 169 8 38 329 35 328 6.27e-54 184
MsG0580028422.01.T01 MTR_0171s0010 32.249 338 213 6 1 327 1 333 2.38e-53 183
MsG0580028422.01.T01 MTR_3g024520 34.783 322 195 4 15 327 11 326 4.53e-53 182
MsG0580028422.01.T01 MTR_3g025230 34.783 322 195 4 15 327 11 326 5.03e-53 182
MsG0580028422.01.T01 MTR_4g109470 35.154 293 170 4 46 327 40 323 6.36e-53 182
MsG0580028422.01.T01 MTR_1g097240 34.356 326 195 5 12 328 6 321 7.38e-53 181
MsG0580028422.01.T01 MTR_6g039630 39.147 258 149 4 5 258 2 255 2.85e-52 174
MsG0580028422.01.T01 MTR_4g048580 31.646 316 206 5 15 327 16 324 4.76e-52 179
MsG0580028422.01.T01 MTR_1g103670 32.733 333 201 5 10 329 1 323 7.44e-52 179
MsG0580028422.01.T01 MTR_5g095290 34.564 298 177 7 36 327 40 325 7.63e-52 179
MsG0580028422.01.T01 MTR_5g045770 35.061 328 196 6 9 327 1 320 8.38e-52 178
MsG0580028422.01.T01 MTR_7g087520 33.993 303 181 3 38 327 38 334 1.83e-51 178
MsG0580028422.01.T01 MTR_8g046210 34.161 322 200 5 13 327 14 330 3.98e-51 177
MsG0580028422.01.T01 MTR_7g012860 36.634 303 172 7 38 329 34 327 1.73e-50 175
MsG0580028422.01.T01 MTR_0287s0060 36.634 303 172 7 38 329 34 327 1.73e-50 175
MsG0580028422.01.T01 MTR_1g031700 31.437 334 207 5 3 329 5 323 1.84e-50 175
MsG0580028422.01.T01 MTR_4g025970 33.841 328 201 5 9 327 1 321 2.17e-50 175
MsG0580028422.01.T01 MTR_5g095260 34.459 296 177 7 38 327 42 326 7.73e-50 173
MsG0580028422.01.T01 MTR_7g103450 30.938 320 203 4 16 324 25 337 3.34e-49 172
MsG0580028422.01.T01 MTR_1g103680 29.851 335 213 5 2 329 5 324 3.49e-49 172
MsG0580028422.01.T01 MTR_5g072980 34.768 302 180 6 38 329 34 328 4.73e-49 171
MsG0580028422.01.T01 MTR_5g072930 34.768 302 180 6 38 329 34 328 4.73e-49 171
MsG0580028422.01.T01 MTR_5g023680 36.667 300 173 6 38 328 6 297 5.86e-49 171
MsG0580028422.01.T01 MTR_4g025950 35.433 254 157 3 29 275 21 274 5.03e-48 164
MsG0580028422.01.T01 MTR_8g046240 33.540 322 202 5 13 327 14 330 6.41e-48 168
MsG0580028422.01.T01 MTR_4g026050 36.615 325 186 8 13 327 6 320 9.14e-48 168
MsG0580028422.01.T01 MTR_4g062510 34.448 299 176 6 44 327 44 337 1.06e-47 168
MsG0580028422.01.T01 MTR_1g107295 33.887 301 175 5 44 327 45 338 1.53e-47 168
MsG0580028422.01.T01 MTR_5g073230 33.446 296 167 9 38 327 42 313 1.55e-47 167
MsG0580028422.01.T01 MTR_3g058380 38.340 253 140 6 82 327 2 245 2.45e-47 165
MsG0580028422.01.T01 MTR_7g092600 33.742 326 199 6 12 327 10 328 9.02e-47 166
MsG0580028422.01.T01 MTR_8g469300 31.953 338 210 6 1 327 1 329 1.47e-46 165
MsG0580028422.01.T01 MTR_4g062530 31.498 327 206 6 8 327 5 320 1.00e-45 161
MsG0580028422.01.T01 MTR_5g016410 32.219 329 200 6 10 327 6 322 1.03e-45 162
MsG0580028422.01.T01 MTR_5g007450 30.982 326 204 4 8 328 13 322 1.13e-45 162
MsG0580028422.01.T01 MTR_0608s0010 30.861 337 191 9 3 329 5 309 1.60e-45 159
MsG0580028422.01.T01 MTR_5g007550 30.982 326 204 4 8 328 13 322 1.64e-45 162
MsG0580028422.01.T01 MTR_4g026200 34.951 309 181 8 29 327 22 320 1.70e-45 162
MsG0580028422.01.T01 MTR_5g018480 32.168 286 176 5 30 297 30 315 1.83e-45 157
MsG0580028422.01.T01 MTR_7g027960 31.751 337 196 10 8 328 4 322 2.57e-45 162
MsG0580028422.01.T01 MTR_5g073020 34.219 301 179 7 38 327 34 326 3.00e-45 161
MsG0580028422.01.T01 MTR_3g077460 36.364 286 140 8 39 321 9 255 5.32e-45 158
MsG0580028422.01.T01 MTR_2g437840 33.433 335 197 7 6 327 1 322 6.48e-45 160
MsG0580028422.01.T01 MTR_6g084910 55.932 118 52 0 115 232 3 120 1.41e-44 149
MsG0580028422.01.T01 MTR_7g028020 31.454 337 197 10 8 328 4 322 2.74e-44 159
MsG0580028422.01.T01 MTR_5g016440 31.498 327 202 8 9 327 5 317 4.66e-44 158
MsG0580028422.01.T01 MTR_4g088400 32.095 296 178 7 33 313 41 328 1.18e-43 157
MsG0580028422.01.T01 MTR_8g091680 38.078 281 129 7 48 327 39 275 1.82e-43 155
MsG0580028422.01.T01 MTR_1g091023 32.012 328 208 5 3 327 5 320 3.04e-43 155
MsG0580028422.01.T01 MTR_5g007460 32.226 301 189 4 36 328 8 301 3.31e-43 155
MsG0580028422.01.T01 MTR_8g468780 33.708 267 159 5 72 327 1 260 3.39e-43 154
MsG0580028422.01.T01 MTR_1g055325 30.931 333 212 5 2 329 25 344 5.63e-43 155
MsG0580028422.01.T01 MTR_2g073420 30.357 336 215 5 3 329 9 334 6.09e-43 155
MsG0580028422.01.T01 MTR_6g008500 31.044 364 198 12 1 327 10 357 5.30e-42 153
MsG0580028422.01.T01 MTR_4g102310 31.208 298 191 5 38 328 40 330 1.06e-41 152
MsG0580028422.01.T01 MTR_1g091010 31.098 328 210 5 3 327 5 319 1.70e-41 151
MsG0580028422.01.T01 MTR_8g036185 31.438 299 182 6 47 329 44 335 2.42e-41 151
MsG0580028422.01.T01 MTR_5g095220 31.633 294 170 7 38 327 29 295 3.25e-41 150
MsG0580028422.01.T01 MTR_7g075390 30.655 336 218 6 1 328 1 329 3.30e-41 150
MsG0580028422.01.T01 MTR_4g094772 31.894 301 191 5 30 328 26 314 5.88e-41 149
MsG0580028422.01.T01 MTR_4g088425 33.223 301 174 9 38 326 40 325 6.60e-41 149
MsG0580028422.01.T01 MTR_6g042540 31.325 332 203 7 18 329 15 341 1.17e-40 149
MsG0580028422.01.T01 MTR_4g094775 28.743 334 209 7 9 327 3 322 1.57e-39 145
MsG0580028422.01.T01 MTR_0171s0030 32.520 246 148 4 93 327 5 243 1.86e-39 144
MsG0580028422.01.T01 MTR_5g094520 32.946 258 161 5 72 326 1 249 2.43e-39 144
MsG0580028422.01.T01 MTR_3g076550 32.602 319 163 10 13 322 48 323 2.51e-39 145
MsG0580028422.01.T01 MTR_4g018800 30.145 345 204 9 6 327 17 347 3.14e-39 145
MsG0580028422.01.T01 MTR_5g094535 33.755 237 132 4 7 241 10 223 3.75e-39 138
MsG0580028422.01.T01 MTR_2g450040 32.154 311 185 8 37 326 34 339 6.03e-39 144
MsG0580028422.01.T01 MTR_7g075610 31.454 337 211 8 1 327 1 327 7.31e-39 144
MsG0580028422.01.T01 MTR_6g008530 28.775 351 215 9 3 327 10 351 7.92e-39 144
MsG0580028422.01.T01 MTR_1g091003 30.091 329 215 5 2 327 4 320 1.12e-38 143
MsG0580028422.01.T01 MTR_4g026070 36.029 272 163 6 13 276 6 274 1.54e-38 139
MsG0580028422.01.T01 MTR_6g008600 28.940 349 215 8 3 327 10 349 2.93e-38 142
MsG0580028422.01.T01 MTR_6g008650 28.895 353 212 9 1 327 8 347 3.92e-38 142
MsG0580028422.01.T01 MTR_6g008640 30.263 304 186 5 45 327 47 345 4.28e-38 142
MsG0580028422.01.T01 MTR_1g107305 31.655 278 162 5 44 302 45 313 4.33e-38 139
MsG0580028422.01.T01 MTR_6g008620 30.347 346 206 10 4 327 15 347 8.79e-38 141
MsG0580028422.01.T01 MTR_1g037370 30.508 295 194 3 38 328 32 319 5.73e-37 139
MsG0580028422.01.T01 MTR_4g095050 30.164 305 188 5 38 327 32 326 1.13e-36 138
MsG0580028422.01.T01 MTR_3g014880 27.635 351 220 9 2 327 7 348 1.80e-36 138
MsG0580028422.01.T01 MTR_8g012585 31.295 278 172 5 64 327 1 273 2.77e-36 136
MsG0580028422.01.T01 MTR_6g008430 28.144 334 212 9 14 327 15 340 3.50e-36 137
MsG0580028422.01.T01 MTR_4g078110 30.612 294 181 4 36 326 27 300 1.47e-35 134
MsG0580028422.01.T01 MTR_8g012590 31.081 296 188 8 37 326 37 322 1.68e-35 135
MsG0580028422.01.T01 MTR_6g042610 29.499 339 208 10 14 329 12 342 1.93e-35 135
MsG0580028422.01.T01 MTR_4g102280 31.164 292 186 5 44 327 51 335 2.12e-35 134
MsG0580028422.01.T01 MTR_6g084760 58.163 98 40 1 113 210 1 97 9.26e-35 123
MsG0580028422.01.T01 MTR_4g035330 30.380 316 198 7 15 327 14 310 1.41e-34 132
MsG0580028422.01.T01 MTR_4g088415 29.749 279 176 6 38 302 45 317 2.08e-34 129
MsG0580028422.01.T01 MTR_4g088170 26.994 326 209 10 20 327 10 324 2.89e-34 131
MsG0580028422.01.T01 MTR_2g437880 32.119 302 174 6 44 327 39 327 4.34e-34 131
MsG0580028422.01.T01 MTR_6g022450 30.303 330 203 10 13 326 15 333 6.12e-34 130
MsG0580028422.01.T01 MTR_2g073440 28.788 330 198 7 6 329 8 306 7.25e-34 130
MsG0580028422.01.T01 MTR_4g088195 27.331 311 203 9 29 327 25 324 8.50e-34 130
MsG0580028422.01.T01 MTR_7g075540 32.849 344 198 9 1 329 1 326 2.33e-33 129
MsG0580028422.01.T01 MTR_4g088160 27.010 311 204 9 29 327 25 324 2.67e-33 129
MsG0580028422.01.T01 MTR_5g073240 42.754 138 73 2 15 146 56 193 7.23e-33 120
MsG0580028422.01.T01 MTR_3g467220 27.463 335 215 9 12 327 19 344 1.61e-32 127
MsG0580028422.01.T01 MTR_8g104030 59.184 98 38 1 232 327 7 104 1.33e-31 120
MsG0580028422.01.T01 MTR_1g116890 29.167 312 193 9 35 329 32 332 1.97e-31 124
MsG0580028422.01.T01 MTR_7g075600 32.344 337 209 8 1 328 1 327 5.69e-31 122
MsG0580028422.01.T01 MTR_4g077210 30.640 297 186 6 44 329 42 329 1.47e-30 121
MsG0580028422.01.T01 MTR_3g465300 27.300 337 222 8 8 327 16 346 8.81e-30 119
MsG0580028422.01.T01 MTR_1g111240 27.986 293 191 8 46 327 74 357 1.82e-29 118
MsG0580028422.01.T01 MTR_1g097220 29.492 295 186 8 40 324 64 346 2.86e-29 117
MsG0580028422.01.T01 MTR_5g075450 27.393 303 200 8 36 326 32 326 5.59e-29 117
MsG0580028422.01.T01 MTR_7g075580 29.080 337 218 6 1 327 1 326 1.14e-28 115
MsG0580028422.01.T01 MTR_4g471620 36.310 168 99 3 10 176 13 173 1.20e-28 110
MsG0580028422.01.T01 MTR_5g094460 33.684 190 93 3 38 224 30 189 1.38e-28 114
MsG0580028422.01.T01 MTR_5g094670 31.132 212 102 5 15 224 16 185 4.76e-28 110
MsG0580028422.01.T01 MTR_5g045250 29.333 300 183 11 39 327 62 343 4.84e-28 114
MsG0580028422.01.T01 MTR_8g073950 27.445 317 204 9 30 327 33 342 1.21e-27 113
MsG0580028422.01.T01 MTR_8g073960 27.108 332 211 10 20 327 22 346 1.90e-27 112
MsG0580028422.01.T01 MTR_4g133760 31.418 261 134 8 72 327 1 221 3.74e-27 110
MsG0580028422.01.T01 MTR_8g027040 26.510 298 194 8 39 327 86 367 1.62e-26 110
MsG0580028422.01.T01 MTR_5g056720 31.159 276 146 6 60 331 20 255 2.40e-26 108
MsG0580028422.01.T01 MTR_8g104100 58.824 85 33 1 245 327 1 85 3.46e-26 105
MsG0580028422.01.T01 MTR_6g084900 57.143 91 37 2 239 328 2 91 2.03e-25 103
MsG0580028422.01.T01 MTR_8g076372 26.490 302 196 9 45 327 52 346 4.27e-23 100
MsG0580028422.01.T01 MTR_3g467200 24.252 301 199 8 46 327 59 349 5.00e-23 100
MsG0580028422.01.T01 MTR_0451s0010 35.593 177 82 4 152 327 1 146 5.14e-22 95.1
MsG0580028422.01.T01 MTR_3g467290 24.784 347 221 12 6 328 25 355 7.16e-22 96.7
MsG0580028422.01.T01 MTR_8g076390 25.796 314 195 10 45 327 52 358 1.58e-21 95.5
MsG0580028422.01.T01 MTR_1g492820 24.699 332 228 10 8 327 18 339 7.70e-21 93.6
MsG0580028422.01.T01 MTR_5g034900 26.948 308 205 9 38 326 32 338 9.68e-21 93.2
MsG0580028422.01.T01 MTR_2g073480 26.515 264 163 6 72 329 1 239 1.15e-20 92.4
MsG0580028422.01.T01 MTR_2g010250 25.083 303 214 6 38 331 31 329 1.23e-20 92.8
MsG0580028422.01.T01 MTR_4g131830 26.647 334 217 10 9 324 3 326 3.60e-20 91.7
MsG0580028422.01.T01 MTR_2g010300 26.645 304 206 7 38 331 31 327 1.65e-19 89.4
MsG0580028422.01.T01 MTR_2g010330 25.806 279 191 7 61 331 61 331 6.26e-19 87.8
MsG0580028422.01.T01 MTR_8g080520 26.846 298 191 10 40 326 70 351 1.17e-18 87.0
MsG0580028422.01.T01 MTR_5g026520 25.868 317 195 11 36 326 28 330 3.86e-18 85.5
MsG0580028422.01.T01 MTR_8g063280 26.846 298 199 9 38 326 31 318 9.37e-18 84.3
MsG0580028422.01.T01 MTR_2g010290 24.919 309 191 10 38 331 74 356 4.83e-17 82.4
MsG0580028422.01.T01 MTR_2g010380 24.911 281 193 8 61 331 61 333 7.51e-17 81.6
MsG0580028422.01.T01 MTR_0155s0010 36.522 115 73 0 40 154 20 134 7.82e-17 76.6
MsG0580028422.01.T01 MTR_2g010280 25.818 275 188 6 61 327 57 323 1.46e-16 80.9
MsG0580028422.01.T01 MTR_2g010320 25.362 276 190 7 61 328 57 324 1.72e-16 80.5
MsG0580028422.01.T01 MTR_3g057880 41.772 79 46 0 13 91 37 115 1.50e-15 72.4
MsG0580028422.01.T01 MTR_5g094790 25.105 239 131 10 94 328 1 195 3.02e-15 74.3
MsG0580028422.01.T01 MTR_8g063260 26.885 305 188 10 38 325 33 319 7.50e-14 72.4
MsG0580028422.01.T01 MTR_4g026030 33.333 147 86 4 187 327 28 168 4.05e-13 69.7
MsG0580028422.01.T01 MTR_6g022460 46.575 73 36 3 37 106 37 109 9.71e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028422.01.T01 AT3G48320 42.073 328 173 7 1 327 1 312 1.74e-77 245
MsG0580028422.01.T01 AT3G48280 38.769 325 183 5 6 329 4 313 2.98e-70 227
MsG0580028422.01.T01 AT3G48300 41.924 291 157 6 39 328 31 310 1.89e-69 224
MsG0580028422.01.T01 AT3G48300 41.924 291 157 6 39 328 33 312 1.98e-69 224
MsG0580028422.01.T01 AT3G48310 40.893 291 160 6 38 327 33 312 2.62e-69 224
MsG0580028422.01.T01 AT3G48290 40.893 291 158 5 38 326 34 312 4.64e-68 221
MsG0580028422.01.T01 AT3G48270 40.345 290 161 6 39 327 33 311 7.34e-68 221
MsG0580028422.01.T01 AT5G07990 36.391 327 195 4 8 328 4 323 7.85e-68 221
MsG0580028422.01.T01 AT2G30770 39.865 296 165 5 38 329 34 320 1.54e-67 220
MsG0580028422.01.T01 AT3G26310 39.091 330 183 7 5 327 2 320 2.61e-67 219
MsG0580028422.01.T01 AT5G24950 37.415 294 172 5 38 327 33 318 7.54e-65 213
MsG0580028422.01.T01 AT3G26330 38.411 302 168 6 35 327 29 321 1.56e-64 212
MsG0580028422.01.T01 AT1G11610 39.322 295 164 5 38 327 34 318 3.55e-64 211
MsG0580028422.01.T01 AT1G11610 39.322 295 164 5 38 327 34 318 4.33e-64 211
MsG0580028422.01.T01 AT3G26290 38.796 299 171 5 35 327 29 321 5.87e-64 211
MsG0580028422.01.T01 AT3G26290 38.796 299 171 5 35 327 42 334 6.00e-64 211
MsG0580028422.01.T01 AT3G26300 36.778 329 189 6 7 327 4 321 7.10e-64 210
MsG0580028422.01.T01 AT5G24960 38.926 298 166 7 38 329 34 321 1.33e-62 204
MsG0580028422.01.T01 AT3G48290 37.539 317 158 6 38 326 34 338 1.87e-62 207
MsG0580028422.01.T01 AT5G24960 39.189 296 164 7 38 327 34 319 1.98e-61 204
MsG0580028422.01.T01 AT3G26320 36.601 306 180 6 29 327 23 321 4.16e-61 203
MsG0580028422.01.T01 AT5G42590 36.364 330 189 7 6 327 3 319 5.71e-61 202
MsG0580028422.01.T01 AT2G30750 40.678 295 162 4 38 328 34 319 1.00e-60 202
MsG0580028422.01.T01 AT5G57260 35.505 307 185 6 27 327 22 321 1.45e-60 202
MsG0580028422.01.T01 AT4G13310 36.824 296 173 6 38 327 33 320 1.34e-59 196
MsG0580028422.01.T01 AT2G24180 36.824 296 176 5 38 327 37 327 2.66e-58 196
MsG0580028422.01.T01 AT4G13310 36.824 296 173 6 38 327 33 320 2.75e-58 196
MsG0580028422.01.T01 AT5G25120 34.462 325 196 6 10 327 3 317 4.23e-56 190
MsG0580028422.01.T01 AT3G26180 34.743 331 197 6 7 327 3 324 8.96e-56 189
MsG0580028422.01.T01 AT3G26150 34.627 335 194 8 7 328 3 325 1.41e-55 189
MsG0580028422.01.T01 AT1G13080 37.764 331 190 6 6 327 1 324 1.89e-55 188
MsG0580028422.01.T01 AT5G06900 34.448 299 178 6 38 327 35 324 2.00e-55 188
MsG0580028422.01.T01 AT3G26170 34.441 331 198 6 7 327 3 324 2.00e-54 186
MsG0580028422.01.T01 AT5G25140 33.846 325 198 6 10 327 3 317 3.24e-54 185
MsG0580028422.01.T01 AT4G13290 34.122 296 173 5 38 327 34 313 9.82e-54 183
MsG0580028422.01.T01 AT4G13770 34.395 314 188 8 24 328 17 321 1.55e-53 183
MsG0580028422.01.T01 AT4G20240 35.235 298 181 4 36 329 32 321 4.92e-53 179
MsG0580028422.01.T01 AT2G02580 36.637 333 188 9 5 327 2 321 1.22e-52 181
MsG0580028422.01.T01 AT4G20240 35.235 298 181 4 36 329 32 321 2.60e-52 179
MsG0580028422.01.T01 AT3G26160 32.931 331 203 7 7 327 3 324 4.69e-52 179
MsG0580028422.01.T01 AT2G45560 34.118 340 203 7 1 329 4 333 5.24e-52 179
MsG0580028422.01.T01 AT5G25180 33.851 322 198 6 12 327 5 317 2.48e-51 177
MsG0580028422.01.T01 AT1G13110 32.219 329 213 5 6 327 1 326 2.51e-51 177
MsG0580028422.01.T01 AT4G31500 33.887 301 181 8 38 329 30 321 1.86e-50 175
MsG0580028422.01.T01 AT5G25130 32.416 327 199 6 8 327 6 317 2.97e-50 174
MsG0580028422.01.T01 AT5G04330 33.013 312 192 6 29 329 24 329 2.50e-49 172
MsG0580028422.01.T01 AT3G53280 31.879 298 192 5 36 327 27 319 6.07e-49 171
MsG0580028422.01.T01 AT4G36220 34.680 297 175 7 45 327 48 339 1.16e-48 171
MsG0580028422.01.T01 AT2G42250 31.818 330 213 4 6 329 9 332 1.66e-48 170
MsG0580028422.01.T01 AT3G26190 32.667 300 189 5 36 327 27 321 2.11e-48 169
MsG0580028422.01.T01 AT3G26200 34.551 301 182 6 36 327 27 321 4.63e-48 169
MsG0580028422.01.T01 AT3G26280 33.956 321 188 8 21 327 15 325 9.72e-47 165
MsG0580028422.01.T01 AT3G26280 33.956 321 188 8 21 327 32 342 1.31e-46 165
MsG0580028422.01.T01 AT2G45550 32.938 337 194 9 12 329 10 333 2.82e-46 164
MsG0580028422.01.T01 AT5G06905 29.969 327 209 6 11 328 7 322 3.54e-45 161
MsG0580028422.01.T01 AT3G44250 32.226 301 188 7 36 327 27 320 3.86e-45 161
MsG0580028422.01.T01 AT3G26270 33.557 298 185 4 38 327 33 325 6.62e-45 160
MsG0580028422.01.T01 AT1G01280 35.593 295 173 5 44 327 39 327 7.55e-45 160
MsG0580028422.01.T01 AT3G26210 35.052 291 177 5 44 327 38 323 7.57e-45 160
MsG0580028422.01.T01 AT1G33720 32.081 346 185 9 12 329 10 333 1.08e-44 160
MsG0580028422.01.T01 AT3G20940 33.548 310 186 8 28 327 33 332 1.24e-44 160
MsG0580028422.01.T01 AT4G37320 35.103 339 178 12 7 327 6 320 1.33e-44 159
MsG0580028422.01.T01 AT4G12300 31.832 333 208 5 1 327 15 334 2.09e-44 159
MsG0580028422.01.T01 AT4G12320 31.642 335 208 6 1 327 15 336 5.55e-44 158
MsG0580028422.01.T01 AT3G26220 32.424 330 209 5 6 327 1 324 7.17e-44 157
MsG0580028422.01.T01 AT3G20950 32.653 343 205 10 4 328 2 336 1.13e-43 157
MsG0580028422.01.T01 AT1G13090 33.113 302 184 6 36 327 27 320 2.22e-42 153
MsG0580028422.01.T01 AT3G61040 32.215 298 186 4 36 327 32 319 5.69e-42 150
MsG0580028422.01.T01 AT4G31970 31.935 310 186 7 39 326 33 339 1.55e-41 151
MsG0580028422.01.T01 AT5G44620 33.220 295 179 4 44 328 53 339 1.56e-41 151
MsG0580028422.01.T01 AT2G45560 33.333 288 179 5 1 277 4 289 2.43e-41 147
MsG0580028422.01.T01 AT2G14100 32.404 287 181 5 48 328 54 333 2.75e-41 150
MsG0580028422.01.T01 AT3G20110 32.000 325 206 7 10 326 10 327 4.28e-41 150
MsG0580028422.01.T01 AT3G61040 32.215 298 186 4 36 327 32 319 1.08e-40 149
MsG0580028422.01.T01 AT5G67310 31.208 298 188 8 38 327 43 331 1.44e-40 149
MsG0580028422.01.T01 AT2G45570 32.941 340 191 8 12 329 10 334 1.48e-40 149
MsG0580028422.01.T01 AT4G37310 31.548 336 204 9 5 327 3 325 2.41e-40 148
MsG0580028422.01.T01 AT3G20140 33.557 298 181 8 38 327 43 331 4.85e-40 147
MsG0580028422.01.T01 AT4G12330 32.414 290 179 3 44 324 53 334 5.61e-40 147
MsG0580028422.01.T01 AT4G22710 31.142 289 186 4 46 327 62 344 6.35e-40 147
MsG0580028422.01.T01 AT4G37330 33.033 333 190 11 7 327 6 317 8.13e-40 146
MsG0580028422.01.T01 AT4G15330 32.110 327 202 8 6 326 14 326 1.48e-39 146
MsG0580028422.01.T01 AT3G53300 30.892 314 197 7 23 327 19 321 1.52e-39 145
MsG0580028422.01.T01 AT3G32047 33.101 287 178 6 48 328 53 331 1.76e-39 145
MsG0580028422.01.T01 AT4G31940 31.090 312 187 7 39 326 33 340 2.01e-39 146
MsG0580028422.01.T01 AT4G22690 30.796 289 187 4 46 327 93 375 4.24e-39 145
MsG0580028422.01.T01 AT4G37430 28.869 336 206 8 9 327 1 320 6.43e-39 144
MsG0580028422.01.T01 AT3G26230 32.831 332 202 8 6 327 1 321 1.92e-38 143
MsG0580028422.01.T01 AT4G15360 30.383 339 209 7 4 326 3 330 3.88e-38 142
MsG0580028422.01.T01 AT4G37410 29.762 336 198 11 7 327 5 317 7.69e-38 141
MsG0580028422.01.T01 AT5G42580 30.627 271 174 3 57 327 60 316 1.48e-37 140
MsG0580028422.01.T01 AT2G45560 34.728 239 147 4 1 232 4 240 1.85e-37 134
MsG0580028422.01.T01 AT2G40890 26.230 305 203 4 35 327 25 319 2.80e-37 140
MsG0580028422.01.T01 AT1G50520 31.959 291 181 7 46 327 52 334 4.43e-37 139
MsG0580028422.01.T01 AT4G20235 32.941 255 145 4 7 256 1 234 7.55e-37 135
MsG0580028422.01.T01 AT3G26830 30.422 332 209 8 6 327 1 320 9.14e-37 138
MsG0580028422.01.T01 AT4G37340 29.794 339 207 9 1 327 1 320 1.67e-36 137
MsG0580028422.01.T01 AT5G36220 31.657 338 197 12 7 328 8 327 2.31e-36 137
MsG0580028422.01.T01 AT5G10610 28.875 329 213 5 7 328 6 320 4.81e-36 136
MsG0580028422.01.T01 AT4G37400 30.717 293 179 7 46 329 40 317 6.46e-36 136
MsG0580028422.01.T01 AT2G05180 33.739 329 201 8 6 328 15 332 6.84e-36 135
MsG0580028422.01.T01 AT2G25160 30.000 340 211 9 6 327 5 335 1.06e-35 134
MsG0580028422.01.T01 AT2G23190 30.994 342 199 11 1 327 45 364 1.44e-35 135
MsG0580028422.01.T01 AT1G13090 43.396 159 90 0 36 194 27 185 1.56e-35 131
MsG0580028422.01.T01 AT5G57220 30.211 331 203 10 6 327 4 315 2.97e-35 134
MsG0580028422.01.T01 AT2G25160 30.000 340 211 10 6 327 5 335 3.54e-35 134
MsG0580028422.01.T01 AT3G20090 30.389 283 186 4 51 328 58 334 4.50e-35 134
MsG0580028422.01.T01 AT3G25180 27.928 333 222 6 10 329 8 335 4.77e-35 132
MsG0580028422.01.T01 AT3G20120 32.335 334 203 9 6 328 10 331 6.62e-35 133
MsG0580028422.01.T01 AT1G13100 31.399 293 179 9 46 326 37 319 2.38e-34 131
MsG0580028422.01.T01 AT1G50560 33.832 334 197 9 6 327 14 335 3.25e-34 131
MsG0580028422.01.T01 AT4G37370 29.412 340 208 9 1 328 1 320 4.17e-34 131
MsG0580028422.01.T01 AT3G25180 27.928 333 222 6 10 329 8 335 4.85e-34 131
MsG0580028422.01.T01 AT3G20130 30.420 286 184 5 48 326 53 330 1.32e-33 130
MsG0580028422.01.T01 AT4G15350 31.834 289 180 6 48 327 45 325 1.98e-33 129
MsG0580028422.01.T01 AT5G10600 29.595 321 202 6 16 327 30 335 2.49e-33 129
MsG0580028422.01.T01 AT4G31950 30.769 312 176 9 39 326 33 328 3.33e-33 129
MsG0580028422.01.T01 AT2G23220 32.459 305 175 9 38 327 47 335 5.30e-33 128
MsG0580028422.01.T01 AT3G20080 30.293 307 202 5 28 328 33 333 6.50e-33 128
MsG0580028422.01.T01 AT3G20080 30.293 307 202 5 28 328 33 333 6.50e-33 128
MsG0580028422.01.T01 AT3G52970 30.392 306 192 12 38 329 37 335 1.95e-32 126
MsG0580028422.01.T01 AT3G20100 31.544 298 174 8 46 328 50 332 2.38e-32 126
MsG0580028422.01.T01 AT5G47990 29.965 287 187 6 48 327 53 332 2.69e-32 126
MsG0580028422.01.T01 AT4G37360 29.204 339 209 11 1 327 1 320 3.46e-32 125
MsG0580028422.01.T01 AT4G12310 29.795 292 193 4 44 327 51 338 8.58e-32 125
MsG0580028422.01.T01 AT3G52970 29.375 320 191 11 38 329 37 349 1.40e-31 124
MsG0580028422.01.T01 AT2G27000 30.389 283 182 6 51 326 54 328 1.01e-30 122
MsG0580028422.01.T01 AT5G09970 30.233 301 186 10 39 328 71 358 2.10e-30 121
MsG0580028422.01.T01 AT2G46660 28.947 342 203 14 4 327 31 350 2.57e-30 120
MsG0580028422.01.T01 AT2G45580 30.000 290 192 6 44 325 45 331 3.41e-30 119
MsG0580028422.01.T01 AT2G45580 30.000 290 192 6 44 325 45 331 7.23e-30 119
MsG0580028422.01.T01 AT1G74550 26.821 302 188 7 38 328 28 307 2.70e-29 117
MsG0580028422.01.T01 AT3G28740 33.444 302 176 8 38 327 40 328 5.64e-29 117
MsG0580028422.01.T01 AT3G20960 29.630 270 179 5 62 326 67 330 7.26e-29 116
MsG0580028422.01.T01 AT1G74110 26.364 330 211 8 17 327 43 359 1.27e-28 116
MsG0580028422.01.T01 AT4G39950 27.746 346 222 8 2 327 19 356 1.52e-27 113
MsG0580028422.01.T01 AT4G39950 27.746 346 222 8 2 327 59 396 1.64e-27 113
MsG0580028422.01.T01 AT4G15330 29.358 327 183 9 6 326 14 298 4.01e-27 111
MsG0580028422.01.T01 AT3G61880 26.032 315 204 9 23 327 55 350 1.38e-26 110
MsG0580028422.01.T01 AT3G61880 26.032 315 204 9 23 327 55 350 1.56e-26 110
MsG0580028422.01.T01 AT1G74540 26.797 306 189 6 38 328 28 313 2.72e-26 109
MsG0580028422.01.T01 AT3G26180 48.718 117 51 2 7 120 3 113 3.56e-26 107
MsG0580028422.01.T01 AT5G35715 27.444 266 176 6 72 327 1 259 6.15e-26 107
MsG0580028422.01.T01 AT1G28430 29.518 332 210 9 9 327 9 329 8.29e-26 108
MsG0580028422.01.T01 AT1G13710 28.013 307 178 14 39 326 55 337 1.67e-25 107
MsG0580028422.01.T01 AT5G05260 26.970 330 204 9 24 328 30 347 3.06e-25 106
MsG0580028422.01.T01 AT2G22330 26.452 310 206 6 34 327 78 381 9.02e-25 105
MsG0580028422.01.T01 AT2G22330 26.452 310 206 6 34 327 55 358 9.45e-25 105
MsG0580028422.01.T01 AT1G58260 23.919 347 228 8 3 327 8 340 3.69e-24 103
MsG0580028422.01.T01 AT4G15380 26.493 268 189 4 62 328 68 328 4.31e-24 103
MsG0580028422.01.T01 AT3G10560 28.000 325 206 8 21 327 22 336 8.15e-24 102
MsG0580028422.01.T01 AT5G35917 26.250 320 196 9 38 328 43 351 3.40e-23 100
MsG0580028422.01.T01 AT1G16400 26.012 346 220 9 8 327 13 348 4.00e-22 97.4
MsG0580028422.01.T01 AT1G79370 25.904 332 191 9 36 326 39 356 4.18e-22 97.4
MsG0580028422.01.T01 AT5G05260 26.364 330 174 9 24 328 30 315 3.62e-21 94.4
MsG0580028422.01.T01 AT3G20130 28.571 238 156 4 95 326 73 302 6.83e-21 93.6
MsG0580028422.01.T01 AT1G01190 23.939 330 202 12 15 327 60 357 4.40e-20 91.3
MsG0580028422.01.T01 AT1G01190 23.939 330 202 12 15 327 55 352 4.65e-20 91.3
MsG0580028422.01.T01 AT2G27010 29.225 284 166 8 51 326 50 306 5.64e-20 90.9
MsG0580028422.01.T01 AT2G30490 23.288 292 207 7 47 328 43 327 2.02e-19 89.4
MsG0580028422.01.T01 AT1G16410 24.198 343 230 9 8 327 14 349 2.80e-19 88.6
MsG0580028422.01.T01 AT1G11600 25.150 334 223 10 7 324 6 328 2.92e-19 89.0
MsG0580028422.01.T01 AT1G16410 24.198 343 230 9 8 327 14 349 4.04e-19 88.6
MsG0580028422.01.T01 AT5G04630 25.076 331 223 9 9 327 14 331 6.45e-19 87.8
MsG0580028422.01.T01 AT3G53305 31.515 165 102 3 72 226 1 164 4.77e-18 84.0
MsG0580028422.01.T01 AT3G03470 24.092 303 215 6 35 327 29 326 8.53e-18 84.3
MsG0580028422.01.T01 AT1G66540 28.700 223 128 8 120 327 1 207 9.00e-18 84.0
MsG0580028422.01.T01 AT1G33720 29.302 215 120 6 132 329 2 201 5.37e-17 81.6
MsG0580028422.01.T01 AT1G33720 29.302 215 120 6 132 329 2 201 5.37e-17 81.6
MsG0580028422.01.T01 AT1G33720 29.302 215 120 6 132 329 2 201 5.37e-17 81.6
MsG0580028422.01.T01 AT3G20960 27.897 233 157 5 99 326 1 227 5.52e-17 81.6
MsG0580028422.01.T01 AT1G33730 28.780 205 120 5 139 329 5 197 6.54e-16 78.2
MsG0580028422.01.T01 AT1G33730 28.780 205 120 5 139 329 5 197 6.54e-16 78.2
MsG0580028422.01.T01 AT3G10570 25.714 280 196 6 54 327 63 336 7.10e-16 78.6
MsG0580028422.01.T01 AT5G04660 24.638 276 188 7 62 327 69 334 1.34e-15 77.8
MsG0580028422.01.T01 AT3G20120 29.412 204 128 6 132 328 1 195 1.59e-15 77.0
MsG0580028422.01.T01 AT3G20120 29.412 204 128 6 132 328 1 195 1.59e-15 77.0
MsG0580028422.01.T01 AT3G20120 29.412 204 128 6 132 328 1 195 1.59e-15 77.0
MsG0580028422.01.T01 AT3G53290 26.316 209 142 5 87 286 8 213 2.69e-15 76.6
MsG0580028422.01.T01 AT3G61035 28.114 281 153 12 46 306 51 302 1.70e-13 70.9
MsG0580028422.01.T01 AT1G13080 28.649 185 117 5 152 327 28 206 3.61e-13 70.1
MsG0580028422.01.T01 AT1G33720 26.050 238 123 8 132 329 2 226 2.89e-12 67.4
MsG0580028422.01.T01 AT2G12190 23.432 303 216 8 38 327 33 332 3.08e-12 67.8
MsG0580028422.01.T01 AT1G64940 24.074 324 190 13 38 328 34 334 2.24e-11 65.1
MsG0580028422.01.T01 AT3G20090 26.238 202 138 4 132 328 1 196 2.61e-11 64.7

Find 59 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAGGTTCATTTGATCTTC+AGG 0.253410 5:+80319564 MsG0580028422.01.T01:CDS
AGTTCATATCCTTGAATCTT+TGG 0.261312 5:-80319202 None:intergenic
ATGTGTAGGTTTCCTATTAT+TGG 0.265282 5:-80319022 None:intergenic
CCTAACTGTAAGGACATAAT+TGG 0.278805 5:-80319097 None:intergenic
TTTCTGAGTATGGTCCTTAT+TGG 0.280007 5:+80319254 MsG0580028422.01.T01:CDS
CACTTTGAAGAAAGCGTCTT+TGG 0.284043 5:+80319375 MsG0580028422.01.T01:CDS
GAAGGAGGAGTTGGGTGTTT+TGG 0.300247 5:+80319348 MsG0580028422.01.T01:CDS
CCTCCAACACTACCAATAAT+AGG 0.315451 5:+80319010 MsG0580028422.01.T01:CDS
GGATATGAACTCTTGTCTTA+TGG 0.317693 5:+80319214 MsG0580028422.01.T01:CDS
TATTGTGTATAAGATGATAT+TGG 0.333101 5:+80319447 MsG0580028422.01.T01:CDS
GAAGATGAAATGACAATAGT+TGG 0.334321 5:-80319127 None:intergenic
ATAGGAAACCTACACATATT+AGG 0.339582 5:+80319028 MsG0580028422.01.T01:CDS
GTATCAAGAGTTTGAATATA+AGG 0.361561 5:-80318946 None:intergenic
ATGCACCAAACCATTGATCT+AGG 0.374769 5:+80322245 MsG0580028422.01.T01:CDS
GGGCTATGTCTGAACTTCTA+AGG 0.376673 5:+80322366 MsG0580028422.01.T01:CDS
TTGAGATGTTTGGTCCTATT+CGG 0.378788 5:+80319326 MsG0580028422.01.T01:CDS
CCTATTATTGGTAGTGTTGG+AGG 0.392226 5:-80319010 None:intergenic
CCAATTATGTCCTTACAGTT+AGG 0.400582 5:+80319097 MsG0580028422.01.T01:CDS
TTCCTCACACTACGCCAATA+AGG 0.401019 5:-80319268 None:intergenic
GCTGATTATGTTCCTTGGCT+AGG 0.412219 5:+80319547 MsG0580028422.01.T01:CDS
TTTCCTATTATTGGTAGTGT+TGG 0.414642 5:-80319013 None:intergenic
GCTTCAAAAGTTGAGATGTT+TGG 0.415220 5:+80319316 MsG0580028422.01.T01:CDS
CGTTTCCTAGATCAATGGTT+TGG 0.416313 5:-80322250 None:intergenic
ATCTGCGACCGCGATTGAAT+GGG 0.416433 5:+80322346 MsG0580028422.01.T01:CDS
CATCTGCGACCGCGATTGAA+TGG 0.416565 5:+80322345 MsG0580028422.01.T01:CDS
ATCTAGCTGATTATGTTCCT+TGG 0.420213 5:+80319542 MsG0580028422.01.T01:CDS
ATTGTGTATAAGATGATATT+GGG 0.423232 5:+80319448 MsG0580028422.01.T01:CDS
GCAAGTCGACCAAAGATTCA+AGG 0.427698 5:+80319193 MsG0580028422.01.T01:CDS
CGAGAAGCAATTACTTTGAC+CGG 0.441988 5:+80319511 MsG0580028422.01.T01:CDS
TCCTATTCGGAAGGAGGAGT+TGG 0.443908 5:+80319339 MsG0580028422.01.T01:CDS
GTCTTATGGTTCCAAAGGGA+TGG 0.447356 5:+80319228 MsG0580028422.01.T01:CDS
CCCAACTCCTCCTTCCGAAT+AGG 0.452930 5:-80319340 None:intergenic
CTCTTGTCTTATGGTTCCAA+AGG 0.459794 5:+80319223 MsG0580028422.01.T01:CDS
TTCTTCGTTTCCTAGATCAA+TGG 0.483565 5:-80322255 None:intergenic
TCTCAAGATCCGCCACTGCT+TGG 0.486808 5:-80322392 None:intergenic
CCTATTCGGAAGGAGGAGTT+GGG 0.493357 5:+80319340 MsG0580028422.01.T01:CDS
ATCAGCTAGATTAAAAGCTC+CGG 0.508008 5:-80319530 None:intergenic
TGTATAAGATGATATTGGGT+AGG 0.511451 5:+80319452 MsG0580028422.01.T01:CDS
TAAAGCACTTGATGAGGTGC+TGG 0.511998 5:+80322139 MsG0580028422.01.T01:CDS
ATTGGTAGTGTTGGAGGACC+CGG 0.526376 5:-80319004 None:intergenic
TCTTGTCTTATGGTTCCAAA+GGG 0.535258 5:+80319224 MsG0580028422.01.T01:CDS
GTATAAGATGATATTGGGTA+GGG 0.536852 5:+80319453 MsG0580028422.01.T01:CDS
GAAGTTTACCTAATATGTGT+AGG 0.546279 5:-80319036 None:intergenic
TGGAACTTGACCTAACTGTA+AGG 0.552489 5:-80319107 None:intergenic
TTGAAGAAAGCGTCTTTGGT+AGG 0.557454 5:+80319379 MsG0580028422.01.T01:CDS
AGGGATTGAAGTGTTCTATG+TGG 0.575470 5:-80319058 None:intergenic
GATGTTTGGTCCTATTCGGA+AGG 0.581974 5:+80319330 MsG0580028422.01.T01:CDS
GTCCTTATTGGCGTAGTGTG+AGG 0.602620 5:+80319266 MsG0580028422.01.T01:CDS
GTTTGGTCCTATTCGGAAGG+AGG 0.604526 5:+80319333 MsG0580028422.01.T01:CDS
TATTGATCGAACTAACATCA+AGG 0.604873 5:+80322286 MsG0580028422.01.T01:CDS
GAAAGCGTCTTTGGTAGGTG+AGG 0.605616 5:+80319384 MsG0580028422.01.T01:CDS
TATAAGATGATATTGGGTAG+GGG 0.617140 5:+80319454 MsG0580028422.01.T01:CDS
AACGAGTAAAGCACTTGATG+AGG 0.631085 5:+80322133 MsG0580028422.01.T01:CDS
CTAAGGCATCCAAGCAGTGG+CGG 0.632287 5:+80322383 MsG0580028422.01.T01:CDS
CTTCTAAGGCATCCAAGCAG+TGG 0.635684 5:+80322380 MsG0580028422.01.T01:CDS
GGTAGTGTTGGAGGACCCGG+TGG 0.657280 5:-80319001 None:intergenic
AGATCAAATGAACCTAGCCA+AGG 0.661909 5:-80319559 None:intergenic
TGAGGTTGTGAATATAAGTG+AGG 0.664401 5:+80319402 MsG0580028422.01.T01:CDS
AGACATAGCCCATTCAATCG+CGG 0.729027 5:-80322354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATCAAGAATTTATTTTT+GGG - Chr5:80321402-80321421 None:intergenic 10.0%
!!! ATTTAAAATAGATATAATAG+AGG + Chr5:80321303-80321322 MsG0580028422.01.T01:intron 10.0%
!!! CTATTTTAAATTGTTTTATT+TGG - Chr5:80321294-80321313 None:intergenic 10.0%
!! CTTTCCTTATTATTAAAAAT+TGG + Chr5:80320276-80320295 MsG0580028422.01.T01:intron 15.0%
!! TCAAAATTCTCAAATATTTA+AGG + Chr5:80321667-80321686 MsG0580028422.01.T01:intron 15.0%
!! TCTTATCAAAAAAAAAAATC+TGG - Chr5:80320058-80320077 None:intergenic 15.0%
!!! AAAATTAAGTTGAATTCTTA+CGG - Chr5:80320234-80320253 None:intergenic 15.0%
!!! ATTAATGTAACTCTTTTTTA+GGG + Chr5:80322089-80322108 MsG0580028422.01.T01:intron 15.0%
!!! GAAAATCAAGAATTTATTTT+TGG - Chr5:80321403-80321422 None:intergenic 15.0%
!!! TATTAATGTAACTCTTTTTT+AGG + Chr5:80322088-80322107 MsG0580028422.01.T01:intron 15.0%
!!! TTTGGTTAATTTTTTCTTAT+TGG - Chr5:80320135-80320154 None:intergenic 15.0%
!! AACCTAAAAAGTTTGTAATT+AGG - Chr5:80321635-80321654 None:intergenic 20.0%
!! ACAAAATAGATTACATAGTA+AGG - Chr5:80320577-80320596 None:intergenic 20.0%
!! ATTGTGTATAAGATGATATT+GGG + Chr5:80319448-80319467 MsG0580028422.01.T01:CDS 20.0%
!! TATTGTGTATAAGATGATAT+TGG + Chr5:80319447-80319466 MsG0580028422.01.T01:CDS 20.0%
!!! AAAATTGCTTTAAAATGATG+TGG + Chr5:80320657-80320676 MsG0580028422.01.T01:intron 20.0%
!!! AAATTAAGTTGAATTCTTAC+GGG - Chr5:80320233-80320252 None:intergenic 20.0%
!!! AAGCAATTTTGAAATTTACT+TGG - Chr5:80320647-80320666 None:intergenic 20.0%
!!! ACGACCAATTTTTAATAATA+AGG - Chr5:80320283-80320302 None:intergenic 20.0%
!!! ATATTTGAGAATTTTGAAGT+AGG - Chr5:80321664-80321683 None:intergenic 20.0%
!!! TAGTGAAAATACTTTTTGTA+TGG - Chr5:80320980-80320999 None:intergenic 20.0%
!!! TTGATTTGACTTAAAATAAG+TGG - Chr5:80320909-80320928 None:intergenic 20.0%
! AGTAAGGATAATCTATTTAG+AGG - Chr5:80320561-80320580 None:intergenic 25.0%
! ATGGTTGTTTGTAATTGAAA+AGG + Chr5:80319831-80319850 MsG0580028422.01.T01:intron 25.0%
! CAAAGACCTAATTAAAACTT+AGG - Chr5:80321528-80321547 None:intergenic 25.0%
! GTATCAAGAGTTTGAATATA+AGG - Chr5:80318949-80318968 None:intergenic 25.0%
! GTTGACTAATGAAAATGTAA+CGG + Chr5:80321573-80321592 MsG0580028422.01.T01:intron 25.0%
! TGGTTGTTTGTAATTGAAAA+GGG + Chr5:80319832-80319851 MsG0580028422.01.T01:intron 25.0%
!! AAATTGCATAAAGCACATTT+TGG - Chr5:80319941-80319960 None:intergenic 25.0%
!! AATTAATGTCATGAGTTTTG+AGG - Chr5:80319171-80319190 None:intergenic 25.0%
!! AATTGCATAAAGCACATTTT+GGG - Chr5:80319940-80319959 None:intergenic 25.0%
!! ATATGTTGCTTACTCAAATA+AGG - Chr5:80321443-80321462 None:intergenic 25.0%
!! ATCAAGAATAAATGATTTGC+TGG + Chr5:80320480-80320499 MsG0580028422.01.T01:intron 25.0%
!! GACCTAATTACAAACTTTTT+AGG + Chr5:80321630-80321649 MsG0580028422.01.T01:intron 25.0%
!! GTTACATTTTCATTAGTCAA+CGG - Chr5:80321574-80321593 None:intergenic 25.0%
!! GTTGATTGTTGATAGAAAAA+TGG + Chr5:80319992-80320011 MsG0580028422.01.T01:intron 25.0%
!! TTTATCATGCTCTTTTTAAC+TGG + Chr5:80319671-80319690 MsG0580028422.01.T01:intron 25.0%
!! TTTTTCTCTTGTGCAATAAA+GGG + Chr5:80319709-80319728 MsG0580028422.01.T01:intron 25.0%
!!! AAATTGCTCTTTTGAGAAAA+TGG - Chr5:80321173-80321192 None:intergenic 25.0%
!!! ATCAAGAATTTATTTTTGGG+TGG - Chr5:80321399-80321418 None:intergenic 25.0%
!!! CATAATTGGACCATATTTTT+TGG - Chr5:80319086-80319105 None:intergenic 25.0%
!!! TTGCTTTTGATTATCATAGT+TGG - Chr5:80320185-80320204 None:intergenic 25.0%
AAATAAGGACTAGATTGTCA+GGG - Chr5:80321428-80321447 None:intergenic 30.0%
AAGCTCAAATTATCACATCT+TGG - Chr5:80320259-80320278 None:intergenic 30.0%
AAGGATAATCTATTTAGAGG+TGG - Chr5:80320558-80320577 None:intergenic 30.0%
AATAGAGGAAATGATACATG+AGG + Chr5:80321318-80321337 MsG0580028422.01.T01:intron 30.0%
AGATTTGAACCAAAACAACA+AGG + Chr5:80321778-80321797 MsG0580028422.01.T01:intron 30.0%
AGGATATGCCTTTAACATAT+AGG - Chr5:80320945-80320964 None:intergenic 30.0%
AGTTCATATCCTTGAATCTT+TGG - Chr5:80319205-80319224 None:intergenic 30.0%
ATAGGAAACCTACACATATT+AGG + Chr5:80319028-80319047 MsG0580028422.01.T01:CDS 30.0%
ATATATAGACCTAAAAGCCA+GGG - Chr5:80319759-80319778 None:intergenic 30.0%
ATGTGTAGGTTTCCTATTAT+TGG - Chr5:80319025-80319044 None:intergenic 30.0%
ATTATCCATAAAAAACCACC+GGG + Chr5:80318986-80319005 MsG0580028422.01.T01:CDS 30.0%
CATGAGTTATTTGGAAAGAA+CGG - Chr5:80320307-80320326 None:intergenic 30.0%
CATTATCCATAAAAAACCAC+CGG + Chr5:80318985-80319004 MsG0580028422.01.T01:CDS 30.0%
CTTTAACATATAGGTTTCAG+AGG - Chr5:80320936-80320955 None:intergenic 30.0%
CTTTATTGCACAAGAGAAAA+AGG - Chr5:80319710-80319729 None:intergenic 30.0%
GAAGATGAAATGACAATAGT+TGG - Chr5:80319130-80319149 None:intergenic 30.0%
GAAGTTTACCTAATATGTGT+AGG - Chr5:80319039-80319058 None:intergenic 30.0%
GACCTAATTAAAACTTAGGT+TGG - Chr5:80321524-80321543 None:intergenic 30.0%
GAGTTAGTGCATATATGTAA+TGG - Chr5:80321033-80321052 None:intergenic 30.0%
GGATCATAAGAAAGTTTCTT+AGG - Chr5:80321264-80321283 None:intergenic 30.0%
GTATAAGATGATATTGGGTA+GGG + Chr5:80319453-80319472 MsG0580028422.01.T01:CDS 30.0%
TATAAGATGATATTGGGTAG+GGG + Chr5:80319454-80319473 MsG0580028422.01.T01:CDS 30.0%
TATTGATCGAACTAACATCA+AGG + Chr5:80322286-80322305 MsG0580028422.01.T01:CDS 30.0%
TGTATAAGATGATATTGGGT+AGG + Chr5:80319452-80319471 MsG0580028422.01.T01:CDS 30.0%
TGTATTGTTTCCTTACTACT+CGG - Chr5:80320686-80320705 None:intergenic 30.0%
! ATTGCATAAAGCACATTTTG+GGG - Chr5:80319939-80319958 None:intergenic 30.0%
! CTTTTTCTCTTGTGCAATAA+AGG + Chr5:80319708-80319727 MsG0580028422.01.T01:intron 30.0%
! TAAAATAAGTGGTTTGCATG+TGG - Chr5:80320898-80320917 None:intergenic 30.0%
! TATTTTACTAGACATGCTTG+TGG + Chr5:80322310-80322329 MsG0580028422.01.T01:CDS 30.0%
! TCTATTTTGTAAAAGTCGTC+AGG + Chr5:80320587-80320606 MsG0580028422.01.T01:intron 30.0%
! TGGCAAACATGTTTTCTTTA+GGG - Chr5:80320878-80320897 None:intergenic 30.0%
!! ATACTTTTTGTATGGATCGA+TGG - Chr5:80320972-80320991 None:intergenic 30.0%
!! CAAGACTTTGGTGTTTAATT+TGG - Chr5:80320090-80320109 None:intergenic 30.0%
!! CTCTGAAACCTATATGTTAA+AGG + Chr5:80320934-80320953 MsG0580028422.01.T01:intron 30.0%
!! CTTAACCCTTTTGTTTGTTT+GGG - Chr5:80320159-80320178 None:intergenic 30.0%
!! CTTTTGATTATCATAGTTGG+TGG - Chr5:80320182-80320201 None:intergenic 30.0%
!! TTTAGCATCTTTTTCGTAGT+TGG - Chr5:80320440-80320459 None:intergenic 30.0%
!! TTTCCTATTATTGGTAGTGT+TGG - Chr5:80319016-80319035 None:intergenic 30.0%
!!! ACTTCTATTCCTTGTTGTTT+TGG - Chr5:80321790-80321809 None:intergenic 30.0%
!!! AGAATTTATTTTTGGGTGGT+CGG - Chr5:80321395-80321414 None:intergenic 30.0%
!!! ATTGTTTTATTTGGGTGTTG+AGG - Chr5:80321285-80321304 None:intergenic 30.0%
!!! TGGATAATGGTTTTTTGCTT+TGG - Chr5:80318974-80318993 None:intergenic 30.0%
!!! TTGTTACTTTTGCAAGACTT+TGG - Chr5:80320102-80320121 None:intergenic 30.0%
!!! TTTTTGGTTTAGAGTGTTGT+CGG - Chr5:80321121-80321140 None:intergenic 30.0%
AAATGATCCGCAATTCGAAA+TGG + Chr5:80320393-80320412 MsG0580028422.01.T01:intron 35.0%
ACTACTTTATCTCAAGATCC+CGG - Chr5:80319899-80319918 None:intergenic 35.0%
AGTTGATCCATTTCGAATTG+CGG - Chr5:80320403-80320422 None:intergenic 35.0%
ATCAGCTAGATTAAAAGCTC+CGG - Chr5:80319533-80319552 None:intergenic 35.0%
ATCTAGCTGATTATGTTCCT+TGG + Chr5:80319542-80319561 MsG0580028422.01.T01:CDS 35.0%
CAAAGCCCAAACAAACAAAA+GGG + Chr5:80320151-80320170 MsG0580028422.01.T01:intron 35.0%
CAAATAAGGACTAGATTGTC+AGG - Chr5:80321429-80321448 None:intergenic 35.0%
CAATCCCTCTCCAAAAAATA+TGG + Chr5:80319073-80319092 MsG0580028422.01.T01:CDS 35.0%
CATTATGATTCAGATGTGAC+AGG + Chr5:80321726-80321745 MsG0580028422.01.T01:intron 35.0%
CCAATTATGTCCTTACAGTT+AGG + Chr5:80319097-80319116 MsG0580028422.01.T01:CDS 35.0%
CCTAACTGTAAGGACATAAT+TGG - Chr5:80319100-80319119 None:intergenic 35.0%
CTGTCACATCTGAATCATAA+TGG - Chr5:80321728-80321747 None:intergenic 35.0%
GATATATAGACCTAAAAGCC+AGG - Chr5:80319760-80319779 None:intergenic 35.0%
GCTTCAAAAGTTGAGATGTT+TGG + Chr5:80319316-80319335 MsG0580028422.01.T01:CDS 35.0%
GGATATGAACTCTTGTCTTA+TGG + Chr5:80319214-80319233 MsG0580028422.01.T01:CDS 35.0%
GGTCAATAATGCATTTGGTT+TGG - Chr5:80320340-80320359 None:intergenic 35.0%
GTATTGTTTCCTTACTACTC+GGG - Chr5:80320685-80320704 None:intergenic 35.0%
TAAGGAAACAATACACTCCA+TGG + Chr5:80320691-80320710 MsG0580028422.01.T01:intron 35.0%
TATATAGACCTAAAAGCCAG+GGG - Chr5:80319758-80319777 None:intergenic 35.0%
TCTCTTGTGCATGAGTTATT+TGG - Chr5:80320316-80320335 None:intergenic 35.0%
TCTTGTCTTATGGTTCCAAA+GGG + Chr5:80319224-80319243 MsG0580028422.01.T01:CDS 35.0%
TGACTGGAGACTATTTGTTT+GGG - Chr5:80321240-80321259 None:intergenic 35.0%
TGAGGTTGTGAATATAAGTG+AGG + Chr5:80319402-80319421 MsG0580028422.01.T01:CDS 35.0%
TTCTTCGTTTCCTAGATCAA+TGG - Chr5:80322258-80322277 None:intergenic 35.0%
TTGACTGGAGACTATTTGTT+TGG - Chr5:80321241-80321260 None:intergenic 35.0%
TTGAGATGTTTGGTCCTATT+CGG + Chr5:80319326-80319345 MsG0580028422.01.T01:CDS 35.0%
TTTCTGAGTATGGTCCTTAT+TGG + Chr5:80319254-80319273 MsG0580028422.01.T01:CDS 35.0%
! AAAATGGTGTTGGAGGATAA+TGG - Chr5:80321157-80321176 None:intergenic 35.0%
! ACTTCAAAATGTGTCATTGC+AGG - Chr5:80320772-80320791 None:intergenic 35.0%
! AGTGCATATATGTAATGGAG+TGG - Chr5:80321028-80321047 None:intergenic 35.0%
! ATATTGATGATTACCAGCGT+TGG - Chr5:80320746-80320765 None:intergenic 35.0%
! ATCATTTTGTTCAGCTTGGT+AGG - Chr5:80320380-80320399 None:intergenic 35.0%
! GGAGGATAATGGTGTATAAA+GGG - Chr5:80321146-80321165 None:intergenic 35.0%
! GTGCATATATGTAATGGAGT+GGG - Chr5:80321027-80321046 None:intergenic 35.0%
! GTGGCAAACATGTTTTCTTT+AGG - Chr5:80320879-80320898 None:intergenic 35.0%
! TGGAGGATAATGGTGTATAA+AGG - Chr5:80321147-80321166 None:intergenic 35.0%
! TGGTGTATAAAGGGAGTTTT+TGG - Chr5:80321137-80321156 None:intergenic 35.0%
!! AGAAAGTTTCTTAGGTTGAC+TGG - Chr5:80321256-80321275 None:intergenic 35.0%
!! CAAACATGTTTTCTTTAGGG+TGG - Chr5:80320875-80320894 None:intergenic 35.0%
!! CTCTTTTGAGAAAATGGTGT+TGG - Chr5:80321167-80321186 None:intergenic 35.0%
!! GCTTAACCCTTTTGTTTGTT+TGG - Chr5:80320160-80320179 None:intergenic 35.0%
!! TTAAGTTGAATTCTTACGGG+TGG - Chr5:80320230-80320249 None:intergenic 35.0%
!! TTTTGAGAAAATGGTGTTGG+AGG - Chr5:80321164-80321183 None:intergenic 35.0%
!!! ATGTCATGAGTTTTGAGGAA+TGG - Chr5:80319166-80319185 None:intergenic 35.0%
!!! CGGTGGTTTTTTATGGATAA+TGG - Chr5:80318987-80319006 None:intergenic 35.0%
!!! GGCCAACCTAAGTTTTAATT+AGG + Chr5:80321519-80321538 MsG0580028422.01.T01:intron 35.0%
!!! TGGACCATATTTTTTGGAGA+GGG - Chr5:80319080-80319099 None:intergenic 35.0%
!!! TTGGACCATATTTTTTGGAG+AGG - Chr5:80319081-80319100 None:intergenic 35.0%
AGACTATTTGTTTGGGGAAG+GGG - Chr5:80321233-80321252 None:intergenic 40.0%
AGATCAAATGAACCTAGCCA+AGG - Chr5:80319562-80319581 None:intergenic 40.0%
ATGCACCAAACCATTGATCT+AGG + Chr5:80322245-80322264 MsG0580028422.01.T01:CDS 40.0%
CACAAAGCTGAGATTCAGAA+AGG + Chr5:80320526-80320545 MsG0580028422.01.T01:intron 40.0%
CCAAAGCCCAAACAAACAAA+AGG + Chr5:80320150-80320169 MsG0580028422.01.T01:intron 40.0%
CCTCCAACACTACCAATAAT+AGG + Chr5:80319010-80319029 MsG0580028422.01.T01:CDS 40.0%
CGAGAAGCAATTACTTTGAC+CGG + Chr5:80319511-80319530 MsG0580028422.01.T01:CDS 40.0%
CGTTTCCTAGATCAATGGTT+TGG - Chr5:80322253-80322272 None:intergenic 40.0%
CTCAGAAAAAACCATCCCTT+TGG - Chr5:80319242-80319261 None:intergenic 40.0%
CTCTTGTCTTATGGTTCCAA+AGG + Chr5:80319223-80319242 MsG0580028422.01.T01:CDS 40.0%
GACTGGAGACTATTTGTTTG+GGG - Chr5:80321239-80321258 None:intergenic 40.0%
GAGACTATTTGTTTGGGGAA+GGG - Chr5:80321234-80321253 None:intergenic 40.0%
GCAAACATAGACATCTTCAG+AGG + Chr5:80320609-80320628 MsG0580028422.01.T01:intron 40.0%
GCTAGGTTCATTTGATCTTC+AGG + Chr5:80319564-80319583 MsG0580028422.01.T01:CDS 40.0%
GCTTGGTAGGTGTTTCAAAA+TGG - Chr5:80320367-80320386 None:intergenic 40.0%
TGGAACTTGACCTAACTGTA+AGG - Chr5:80319110-80319129 None:intergenic 40.0%
TGGTAGGTGTTTCAAAATGG+CGG - Chr5:80320364-80320383 None:intergenic 40.0%
TGTGCAATAAAGGGATCACT+TGG + Chr5:80319718-80319737 MsG0580028422.01.T01:intron 40.0%
TTGTATGGATCGATGGTTAG+AGG - Chr5:80320965-80320984 None:intergenic 40.0%
! AACGAGTAAAGCACTTGATG+AGG + Chr5:80322133-80322152 MsG0580028422.01.T01:CDS 40.0%
! ACGCACATCGATTGAAACTT+TGG - Chr5:80321467-80321486 None:intergenic 40.0%
! AGGGATTGAAGTGTTCTATG+TGG - Chr5:80319061-80319080 None:intergenic 40.0%
! ATGTAATGGAGTGGGTTTAG+AGG - Chr5:80321019-80321038 None:intergenic 40.0%
! TGATTACCAGCGTTGGAATT+TGG - Chr5:80320739-80320758 None:intergenic 40.0%
!! AGGTTGGCCTTTGTGTATTT+GGG - Chr5:80321508-80321527 None:intergenic 40.0%
!! CACTTTGAAGAAAGCGTCTT+TGG + Chr5:80319375-80319394 MsG0580028422.01.T01:CDS 40.0%
!! CATCTTTTTCGTAGTTGGCT+TGG - Chr5:80320435-80320454 None:intergenic 40.0%
!! CCTATTATTGGTAGTGTTGG+AGG - Chr5:80319013-80319032 None:intergenic 40.0%
!! CCTTTTGTTTGTTTGGGCTT+TGG - Chr5:80320153-80320172 None:intergenic 40.0%
!! TAGGTTGGCCTTTGTGTATT+TGG - Chr5:80321509-80321528 None:intergenic 40.0%
!! TTGAAGAAAGCGTCTTTGGT+AGG + Chr5:80319379-80319398 MsG0580028422.01.T01:CDS 40.0%
!!! ACATGTTTTCTTTAGGGTGG+AGG - Chr5:80320872-80320891 None:intergenic 40.0%
!!! CATGTTTTCTTTAGGGTGGA+GGG - Chr5:80320871-80320890 None:intergenic 40.0%
!!! GGGATGGTTTTTTCTGAGTA+TGG + Chr5:80319244-80319263 MsG0580028422.01.T01:CDS 40.0%
AGACATAGCCCATTCAATCG+CGG - Chr5:80322357-80322376 None:intergenic 45.0%
ATTACCCATCAAGCTCTCTC+CGG + Chr5:80319877-80319896 MsG0580028422.01.T01:intron 45.0%
ATTTGTTTGGGGAAGGGGTA+TGG - Chr5:80321228-80321247 None:intergenic 45.0%
CCATTAGGGTACACAATCCA+TGG - Chr5:80320711-80320730 None:intergenic 45.0%
CTACGCTCTTTCCTTCTTCA+AGG - Chr5:80321347-80321366 None:intergenic 45.0%
GATGTTTGGTCCTATTCGGA+AGG + Chr5:80319330-80319349 MsG0580028422.01.T01:CDS 45.0%
GCAAGTCGACCAAAGATTCA+AGG + Chr5:80319193-80319212 MsG0580028422.01.T01:CDS 45.0%
GCGGTGGTCAATAATGCATT+TGG - Chr5:80320345-80320364 None:intergenic 45.0%
GCGTAGACAGGACATACTTA+AGG + Chr5:80321361-80321380 MsG0580028422.01.T01:intron 45.0%
GCTGATTATGTTCCTTGGCT+AGG + Chr5:80319547-80319566 MsG0580028422.01.T01:CDS 45.0%
GGAATTTGGACCAGCCATTA+GGG - Chr5:80320725-80320744 None:intergenic 45.0%
GGAGACTATTTGTTTGGGGA+AGG - Chr5:80321235-80321254 None:intergenic 45.0%
GGGCTATGTCTGAACTTCTA+AGG + Chr5:80322366-80322385 MsG0580028422.01.T01:CDS 45.0%
GTCTTATGGTTCCAAAGGGA+TGG + Chr5:80319228-80319247 MsG0580028422.01.T01:CDS 45.0%
TAAGGACTAGATTGTCAGGG+TGG - Chr5:80321425-80321444 None:intergenic 45.0%
TAGGTGTTTCAAAATGGCGG+TGG - Chr5:80320361-80320380 None:intergenic 45.0%
TGGAATTTGGACCAGCCATT+AGG - Chr5:80320726-80320745 None:intergenic 45.0%
TTCCTCACACTACGCCAATA+AGG - Chr5:80319271-80319290 None:intergenic 45.0%
! AAGAAGGAAAGAGCGTAGAC+AGG + Chr5:80321349-80321368 MsG0580028422.01.T01:intron 45.0%
! AATGGAGTGGGTTTAGAGGA+GGG - Chr5:80321015-80321034 None:intergenic 45.0%
! AGCTTTGTGTGAGTGGTTGT+GGG - Chr5:80320515-80320534 None:intergenic 45.0%
! AGGAACTGGTAGAGAAGTGT+AGG - Chr5:80320800-80320819 None:intergenic 45.0%
! CCATGGATTGTGTACCCTAA+TGG + Chr5:80320708-80320727 MsG0580028422.01.T01:intron 45.0%
! GAATCTCAGCTTTGTGTGAG+TGG - Chr5:80320522-80320541 None:intergenic 45.0%
! GCGGATCATTTTGTTCAGCT+TGG - Chr5:80320384-80320403 None:intergenic 45.0%
! TAAAGCACTTGATGAGGTGC+TGG + Chr5:80322139-80322158 MsG0580028422.01.T01:CDS 45.0%
! TAATGGAGTGGGTTTAGAGG+AGG - Chr5:80321016-80321035 None:intergenic 45.0%
!! ACCATGACGTTGATGATGCT+TGG - Chr5:80319816-80319835 None:intergenic 45.0%
!! CCATGACGTTGATGATGCTT+GGG - Chr5:80319815-80319834 None:intergenic 45.0%
!! GGTTTTATCTCGAATTCCCC+TGG + Chr5:80319739-80319758 MsG0580028422.01.T01:intron 45.0%
!!! TTTATTTTTGGGTGGTCGGC+TGG - Chr5:80321391-80321410 None:intergenic 45.0%
!!! TTTTCTTTAGGGTGGAGGGA+GGG - Chr5:80320867-80320886 None:intergenic 45.0%
!! TAATAATAAAAAATTAAAAG+AGG + Chr5:80321985-80322004 MsG0580028422.01.T01:intron 5.0%
!!! TATTTTAAATTGTTTTATTT+GGG - Chr5:80321293-80321312 None:intergenic 5.0%
ACATGAGGCAGCCTTGAAGA+AGG + Chr5:80321333-80321352 MsG0580028422.01.T01:intron 50.0%
ATCTGCGACCGCGATTGAAT+GGG + Chr5:80322346-80322365 MsG0580028422.01.T01:CDS 50.0%
ATTTGGGCCGCCTCCATATA+GGG - Chr5:80321492-80321511 None:intergenic 50.0%
CCCAAGCATCATCAACGTCA+TGG + Chr5:80319812-80319831 MsG0580028422.01.T01:intron 50.0%
CCTATTCGGAAGGAGGAGTT+GGG + Chr5:80319340-80319359 MsG0580028422.01.T01:CDS 50.0%
GAATTCTTACGGGTGGCTGA+AGG - Chr5:80320223-80320242 None:intergenic 50.0%
GATGTGGTTCCCGAGTAGTA+AGG + Chr5:80320673-80320692 MsG0580028422.01.T01:intron 50.0%
GGATTGTGTACCCTAATGGC+TGG + Chr5:80320712-80320731 MsG0580028422.01.T01:intron 50.0%
GTCATGTGAAGCTGGGTGAT+GGG - Chr5:80321077-80321096 None:intergenic 50.0%
GTCCTTATTGGCGTAGTGTG+AGG + Chr5:80319266-80319285 MsG0580028422.01.T01:CDS 50.0%
GTGTCAAGGGTTGCTTGCAT+GGG - Chr5:80320826-80320845 None:intergenic 50.0%
GTTTGGTCCTATTCGGAAGG+AGG + Chr5:80319333-80319352 MsG0580028422.01.T01:CDS 50.0%
TATTTGGGCCGCCTCCATAT+AGG - Chr5:80321493-80321512 None:intergenic 50.0%
TCATGTGAAGCTGGGTGATG+GGG - Chr5:80321076-80321095 None:intergenic 50.0%
TCCTATTCGGAAGGAGGAGT+TGG + Chr5:80319339-80319358 MsG0580028422.01.T01:CDS 50.0%
TTACCCATCAAGCTCTCTCC+GGG + Chr5:80319878-80319897 MsG0580028422.01.T01:intron 50.0%
! CAGCTTTGTGTGAGTGGTTG+TGG - Chr5:80320516-80320535 None:intergenic 50.0%
! GAAGGAGGAGTTGGGTGTTT+TGG + Chr5:80319348-80319367 MsG0580028422.01.T01:CDS 50.0%
! TCGGCTCGTTACGATGTAGA+GGG - Chr5:80321102-80321121 None:intergenic 50.0%
!! ATTGGTAGTGTTGGAGGACC+CGG - Chr5:80319007-80319026 None:intergenic 50.0%
!! CTCGAATTCCCCTGGCTTTT+AGG + Chr5:80319747-80319766 MsG0580028422.01.T01:intron 50.0%
!! CTTCTAAGGCATCCAAGCAG+TGG + Chr5:80322380-80322399 MsG0580028422.01.T01:CDS 50.0%
!! GAAAGCGTCTTTGGTAGGTG+AGG + Chr5:80319384-80319403 MsG0580028422.01.T01:CDS 50.0%
!!! GAGGACCCGGTGGTTTTTTA+TGG - Chr5:80318994-80319013 None:intergenic 50.0%
!!! GTTTTCTTTAGGGTGGAGGG+AGG - Chr5:80320868-80320887 None:intergenic 50.0%
AGATCCCGGAGAGAGCTTGA+TGG - Chr5:80319885-80319904 None:intergenic 55.0%
ATGTGCGTCCCCCTATATGG+AGG + Chr5:80321479-80321498 MsG0580028422.01.T01:intron 55.0%
CATCTGCGACCGCGATTGAA+TGG + Chr5:80322345-80322364 MsG0580028422.01.T01:CDS 55.0%
CCCAACTCCTCCTTCCGAAT+AGG - Chr5:80319343-80319362 None:intergenic 55.0%
CGGCTCGTTACGATGTAGAG+GGG - Chr5:80321101-80321120 None:intergenic 55.0%
GAGGCGGCCCAAATACACAA+AGG + Chr5:80321498-80321517 MsG0580028422.01.T01:intron 55.0%
GATCCCGGAGAGAGCTTGAT+GGG - Chr5:80319884-80319903 None:intergenic 55.0%
GCTCGTTACGATGTAGAGGG+GGG - Chr5:80321099-80321118 None:intergenic 55.0%
GCTGGTCCAAATTCCAACGC+TGG + Chr5:80320730-80320749 MsG0580028422.01.T01:intron 55.0%
GGCTCGTTACGATGTAGAGG+GGG - Chr5:80321100-80321119 None:intergenic 55.0%
GGTATGGAGGTTTGGGGGTA+AGG - Chr5:80321212-80321231 None:intergenic 55.0%
GGTCATGTGAAGCTGGGTGA+TGG - Chr5:80321078-80321097 None:intergenic 55.0%
GGTGTCAAGGGTTGCTTGCA+TGG - Chr5:80320827-80320846 None:intergenic 55.0%
TCAAGGGTTGCTTGCATGGG+AGG - Chr5:80320823-80320842 None:intergenic 55.0%
TCGATGTGCGTCCCCCTATA+TGG + Chr5:80321476-80321495 MsG0580028422.01.T01:intron 55.0%
TTTGGGCCGCCTCCATATAG+GGG - Chr5:80321491-80321510 None:intergenic 55.0%
! AGGCGTGGAACTGGTGTCAA+GGG - Chr5:80320839-80320858 None:intergenic 55.0%
! CTAAGGCATCCAAGCAGTGG+CGG + Chr5:80322383-80322402 MsG0580028422.01.T01:CDS 55.0%
! GAAGGGGTATGGAGGTTTGG+GGG - Chr5:80321217-80321236 None:intergenic 55.0%
! GGAAGGGGTATGGAGGTTTG+GGG - Chr5:80321218-80321237 None:intergenic 55.0%
! GGGAAGGGGTATGGAGGTTT+GGG - Chr5:80321219-80321238 None:intergenic 55.0%
! TGTTTGGGGAAGGGGTATGG+AGG - Chr5:80321225-80321244 None:intergenic 55.0%
!! GTCGGCTCGTTACGATGTAG+AGG - Chr5:80321103-80321122 None:intergenic 55.0%
AGAGGGGGGTCATGTGAAGC+TGG - Chr5:80321085-80321104 None:intergenic 60.0%
AGGGTGATGAGGCGTGGAAC+TGG - Chr5:80320848-80320867 None:intergenic 60.0%
AGGGTTGCTTGCATGGGAGG+AGG - Chr5:80320820-80320839 None:intergenic 60.0%
ATGGGGACGGGTCTGTTTGG+TGG - Chr5:80321059-80321078 None:intergenic 60.0%
GAGGGGGGTCATGTGAAGCT+GGG - Chr5:80321084-80321103 None:intergenic 60.0%
GAGGTTTGGGGGTAAGGCAG+AGG - Chr5:80321206-80321225 None:intergenic 60.0%
GCTTGCATGGGAGGAGGAAC+TGG - Chr5:80320814-80320833 None:intergenic 60.0%
GTTTGGGGGTAAGGCAGAGG+AGG - Chr5:80321203-80321222 None:intergenic 60.0%
TGCGTCCCCCTATATGGAGG+CGG + Chr5:80321482-80321501 MsG0580028422.01.T01:intron 60.0%
TTGGGCCGCCTCCATATAGG+GGG - Chr5:80321490-80321509 None:intergenic 60.0%
! GAGGCGTGGAACTGGTGTCA+AGG - Chr5:80320840-80320859 None:intergenic 60.0%
! GGGGAAGGGGTATGGAGGTT+TGG - Chr5:80321220-80321239 None:intergenic 60.0%
! GTGATGGGGACGGGTCTGTT+TGG - Chr5:80321062-80321081 None:intergenic 60.0%
!! GTGAAGCTGGGTGATGGGGA+CGG - Chr5:80321072-80321091 None:intergenic 60.0%
!! TGAAGCTGGGTGATGGGGAC+GGG - Chr5:80321071-80321090 None:intergenic 60.0%
AGGGTGGAGGGAGGGTGATG+AGG - Chr5:80320859-80320878 None:intergenic 65.0%
! GGTAGTGTTGGAGGACCCGG+TGG - Chr5:80319004-80319023 None:intergenic 65.0%
GGAGGGAGGGTGATGAGGCG+TGG - Chr5:80320854-80320873 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 80318890 80322412 80318890 ID=MsG0580028422.01;Name=MsG0580028422.01
Chr5 mRNA 80318890 80322412 80318890 ID=MsG0580028422.01.T01;Parent=MsG0580028422.01;Name=MsG0580028422.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0|0|1|1|1|2|0|332
Chr5 exon 80318890 80319585 80318890 ID=MsG0580028422.01.T01:exon:7686;Parent=MsG0580028422.01.T01
Chr5 exon 80322110 80322412 80322110 ID=MsG0580028422.01.T01:exon:7687;Parent=MsG0580028422.01.T01
Chr5 CDS 80318890 80319585 80318890 ID=MsG0580028422.01.T01:cds;Parent=MsG0580028422.01.T01
Chr5 CDS 80322110 80322412 80322110 ID=MsG0580028422.01.T01:cds;Parent=MsG0580028422.01.T01
Gene Sequence

>MsG0580028422.01.T01

ATGTCTTCTGCAGCAATGATAATATTACTTTCTTTCATTCTCTTTACTTTCACATACCTTATATTCAAACTCTTGATACATCCAAAGCAAAAAACCATTATCCATAAAAAACCACCGGGTCCTCCAACACTACCAATAATAGGAAACCTACACATATTAGGTAAACTTCCACATAGAACACTTCAATCCCTCTCCAAAAAATATGGTCCAATTATGTCCTTACAGTTAGGTCAAGTTCCAACTATTGTCATTTCATCTTCAAAAGCAGCAGAACCATTCCTCAAAACTCATGACATTAATTTTGCAAGTCGACCAAAGATTCAAGGATATGAACTCTTGTCTTATGGTTCCAAAGGGATGGTTTTTTCTGAGTATGGTCCTTATTGGCGTAGTGTGAGGAAACTATGCACTTTAAAACTTCTGAGTGCTTCAAAAGTTGAGATGTTTGGTCCTATTCGGAAGGAGGAGTTGGGTGTTTTGGTTAACACTTTGAAGAAAGCGTCTTTGGTAGGTGAGGTTGTGAATATAAGTGAGGTTGTAGAGAATCTTATTGAGAATATTGTGTATAAGATGATATTGGGTAGGGGTAAGTATGAGCAATTTGACTTGAAGAAGTCTGTTCGAGAAGCAATTACTTTGACCGGAGCTTTTAATCTAGCTGATTATGTTCCTTGGCTAGGTTCATTTGATCTTCAGGGATTAACACGAGCATGCAAGAAAACGAGTAAAGCACTTGATGAGGTGCTGGAAGTGATAATAATAGAACATGAAGAAACTACTAATGTAGATAAAACTCTTCATGAAGACTTTGTTGACATACTTCTTTCATTTATGCACCAAACCATTGATCTAGGAAACGAAGAAAATCATGCTATTGATCGAACTAACATCAAGGCTATTTTACTAGACATGCTTGTGGCAGCAATTGATACATCTGCGACCGCGATTGAATGGGCTATGTCTGAACTTCTAAGGCATCCAAGCAGTGGCGGATCTTGA

Protein sequence

>MsG0580028422.01.T01

MSSAAMIILLSFILFTFTYLIFKLLIHPKQKTIIHKKPPGPPTLPIIGNLHILGKLPHRTLQSLSKKYGPIMSLQLGQVPTIVISSSKAAEPFLKTHDINFASRPKIQGYELLSYGSKGMVFSEYGPYWRSVRKLCTLKLLSASKVEMFGPIRKEELGVLVNTLKKASLVGEVVNISEVVENLIENIVYKMILGRGKYEQFDLKKSVREAITLTGAFNLADYVPWLGSFDLQGLTRACKKTSKALDEVLEVIIIEHEETTNVDKTLHEDFVDILLSFMHQTIDLGNEENHAIDRTNIKAILLDMLVAAIDTSATAIEWAMSELLRHPSSGGS*