AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043464.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043464.01.T01 MTR_8g036105 97.701 174 4 0 1 174 43 216 2.51e-123 346
MsG0880043464.01.T01 MTR_7g075230 61.818 165 50 6 1 158 39 197 1.30e-53 169
MsG0880043464.01.T01 MTR_8g036085 50.282 177 62 6 1 162 48 213 6.65e-43 143
MsG0880043464.01.T01 MTR_7g074990 75.676 74 18 0 2 75 46 119 1.17e-34 122
MsG0880043464.01.T01 MTR_7g096530 52.419 124 42 1 1 107 39 162 8.38e-34 119
MsG0880043464.01.T01 MTR_1g070205 46.970 132 60 3 1 122 37 168 3.17e-30 110
MsG0880043464.01.T01 MTR_7g096610 49.618 131 53 5 1 126 33 155 4.92e-29 107
MsG0880043464.01.T01 MTR_1g070220 61.446 83 32 0 1 83 40 122 3.78e-28 104
MsG0880043464.01.T01 MTR_5g080470 56.962 79 34 0 1 79 32 110 9.12e-27 100
MsG0880043464.01.T01 MTR_5g083230 53.333 90 39 1 6 95 35 121 4.92e-24 92.8
MsG0880043464.01.T01 MTR_6g027710 45.522 134 64 4 1 126 65 197 8.16e-24 93.6
MsG0880043464.01.T01 MTR_2g068760 56.579 76 33 0 6 81 42 117 8.17e-24 92.0
MsG0880043464.01.T01 MTR_5g083960 50.588 85 42 0 6 90 68 152 7.14e-23 90.5
MsG0880043464.01.T01 MTR_4g083680 60.000 70 28 0 6 75 44 113 1.83e-22 89.0
MsG0880043464.01.T01 MTR_3g071590 56.579 76 33 0 6 81 37 112 4.50e-22 87.4
MsG0880043464.01.T01 MTR_7g033800 59.722 72 29 0 6 77 40 111 5.48e-22 87.4
MsG0880043464.01.T01 MTR_3g094690 59.722 72 29 0 6 77 76 147 7.18e-22 89.0
MsG0880043464.01.T01 MTR_3g031660 50.000 90 43 1 5 92 35 124 3.29e-21 85.5
MsG0880043464.01.T01 MTR_6g005070 52.632 76 36 0 6 81 38 113 7.90e-21 84.0
MsG0880043464.01.T01 MTR_4g060950 42.149 121 56 2 5 111 53 173 9.26e-21 84.7
MsG0880043464.01.T01 MTR_3g077240 58.333 72 30 0 6 77 39 110 1.83e-20 84.0
MsG0880043464.01.T01 MTR_3g071420 55.072 69 31 0 6 74 43 111 2.81e-20 83.6
MsG0880043464.01.T01 MTR_4g105170 62.121 66 25 0 5 70 39 104 2.88e-20 83.6
MsG0880043464.01.T01 MTR_2g093310 51.948 77 37 0 5 81 61 137 3.45e-20 83.6
MsG0880043464.01.T01 MTR_3g094690 59.722 72 28 1 6 77 76 146 3.58e-20 84.3
MsG0880043464.01.T01 MTR_3g073690 56.757 74 32 0 6 79 38 111 5.84e-20 83.2
MsG0880043464.01.T01 MTR_5g083010 41.284 109 57 1 5 106 39 147 9.48e-20 82.0
MsG0880043464.01.T01 MTR_5g017950 49.438 89 39 1 5 87 36 124 1.94e-19 83.6
MsG0880043464.01.T01 MTR_6g005080 52.778 72 34 0 6 77 39 110 1.40e-18 77.8
MsG0880043464.01.T01 MTR_1g095850 50.649 77 38 0 4 80 99 175 3.16e-18 79.0
MsG0880043464.01.T01 MTR_3g452660 47.727 88 46 0 6 93 36 123 4.76e-18 79.7
MsG0880043464.01.T01 MTR_6g027700 54.286 70 32 0 6 75 37 106 5.40e-18 78.2
MsG0880043464.01.T01 MTR_5g075020 62.500 72 27 0 6 77 72 143 1.66e-16 74.3
MsG0880043464.01.T01 MTR_5g075020 62.500 72 27 0 6 77 76 147 2.50e-16 73.9
MsG0880043464.01.T01 MTR_8g040900 49.412 85 43 0 6 90 36 120 2.09e-15 71.6
MsG0880043464.01.T01 MTR_5g093010 43.243 74 42 0 6 79 34 107 2.86e-15 69.3
MsG0880043464.01.T01 MTR_7g028905 38.356 73 45 0 6 78 34 106 7.70e-14 64.7
MsG0880043464.01.T01 MTR_8g079660 42.466 73 42 0 6 78 37 109 3.58e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043464.01.T01 AT4G00210 51.323 189 69 3 1 172 36 218 9.96e-55 172
MsG0880043464.01.T01 AT2G45410 51.190 168 61 3 1 168 41 187 1.16e-45 149
MsG0880043464.01.T01 AT2G45420 72.840 81 22 0 1 81 62 142 1.57e-37 130
MsG0880043464.01.T01 AT4G00220 46.328 177 63 4 1 159 42 204 1.04e-36 127
MsG0880043464.01.T01 AT3G58190 56.250 96 40 1 1 96 36 129 5.19e-30 109
MsG0880043464.01.T01 AT3G03760 70.130 77 23 0 1 77 76 152 7.82e-29 107
MsG0880043464.01.T01 AT2G42430 61.728 81 31 0 1 81 40 120 1.15e-28 106
MsG0880043464.01.T01 AT5G06080 61.039 77 30 0 1 77 32 108 2.58e-28 103
MsG0880043464.01.T01 AT2G42440 50.962 104 46 3 1 101 32 133 2.07e-27 103
MsG0880043464.01.T01 AT2G31310 53.571 84 37 1 1 84 32 113 8.06e-25 95.5
MsG0880043464.01.T01 AT2G30130 57.895 76 32 0 6 81 37 112 1.12e-22 90.1
MsG0880043464.01.T01 AT5G63090 60.274 73 29 0 6 78 40 112 3.84e-21 85.9
MsG0880043464.01.T01 AT5G63090 60.274 73 29 0 6 78 40 112 3.84e-21 85.9
MsG0880043464.01.T01 AT5G63090 60.274 73 29 0 6 78 40 112 3.84e-21 85.9
MsG0880043464.01.T01 AT5G63090 60.274 73 29 0 6 78 40 112 3.84e-21 85.9
MsG0880043464.01.T01 AT1G07900 38.095 126 74 1 5 126 61 186 6.69e-21 85.1
MsG0880043464.01.T01 AT3G27650 56.944 72 31 0 6 77 68 139 1.23e-20 84.0
MsG0880043464.01.T01 AT2G28500 51.948 77 37 0 5 81 83 159 3.84e-20 84.3
MsG0880043464.01.T01 AT2G30340 55.556 72 32 0 6 77 82 153 5.29e-20 84.7
MsG0880043464.01.T01 AT2G30340 55.556 72 32 0 6 77 81 152 6.02e-20 84.3
MsG0880043464.01.T01 AT1G16530 36.364 121 69 1 4 124 42 154 1.29e-19 81.3
MsG0880043464.01.T01 AT3G26660 46.753 77 41 0 5 81 33 109 1.31e-19 80.1
MsG0880043464.01.T01 AT3G26620 47.368 76 40 0 6 81 34 109 2.00e-19 79.7
MsG0880043464.01.T01 AT1G31320 62.069 58 22 0 6 63 42 99 2.86e-19 80.5
MsG0880043464.01.T01 AT3G11090 50.000 72 36 0 6 77 40 111 2.07e-18 78.2
MsG0880043464.01.T01 AT5G66870 46.429 112 50 2 6 107 36 147 1.27e-17 79.0
MsG0880043464.01.T01 AT2G40470 62.500 72 27 0 6 77 49 120 4.38e-17 75.5
MsG0880043464.01.T01 AT2G40470 62.500 72 27 0 6 77 74 145 5.58e-17 75.9
MsG0880043464.01.T01 AT2G23660 47.297 74 39 0 5 78 33 106 1.21e-15 73.2
MsG0880043464.01.T01 AT2G23660 47.297 74 39 0 5 78 33 106 1.21e-15 73.2
MsG0880043464.01.T01 AT2G23660 47.297 74 39 0 5 78 33 106 1.21e-15 73.2
MsG0880043464.01.T01 AT1G65620 52.500 80 38 0 6 85 38 117 3.10e-14 67.8
MsG0880043464.01.T01 AT1G65620 52.500 80 38 0 6 85 38 117 3.10e-14 67.8
MsG0880043464.01.T01 AT1G65620 52.500 80 38 0 6 85 38 117 3.10e-14 67.8
MsG0880043464.01.T01 AT1G65620 52.500 80 38 0 6 85 38 117 3.10e-14 67.8
MsG0880043464.01.T01 AT1G65620 52.500 80 38 0 6 85 38 117 3.10e-14 67.8
MsG0880043464.01.T01 AT3G50510 37.647 85 53 0 5 89 40 124 1.34e-11 60.8
MsG0880043464.01.T01 AT3G50510 37.647 85 53 0 5 89 40 124 1.34e-11 60.8

Find 37 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGATGGAGCTAGCGATAT+TGG 0.266369 8:-25235896 None:intergenic
AGGGCTAGAGACCCTGTTTA+TGG 0.285999 8:+25230088 MsG0880043464.01.T01:CDS
GGTGAAGAGCTTTGAGGGTT+TGG 0.329428 8:-25235920 None:intergenic
CTTTGAGGGTTTGGAAGAGA+TGG 0.383095 8:-25235911 None:intergenic
GAGATGGAGCTAGCGATATT+GGG 0.399594 8:-25235895 None:intergenic
TGAGCAACACAACCATAAAC+AGG 0.407283 8:-25230100 None:intergenic
GCAGCAGTTCACAAAGTGTT+TGG 0.411879 8:+25229977 MsG0880043464.01.T01:CDS
CATCTTTGCACTTCAACAAC+AGG 0.427473 8:+25230123 MsG0880043464.01.T01:CDS
GGTGCAGGTTATGAGCTTGC+AGG 0.442243 8:+25235826 MsG0880043464.01.T01:intron
TGATGATGAACTCCAAGCTT+TGG 0.447081 8:+25236087 MsG0880043464.01.T01:CDS
CGCAAGAGTGGCTTGAACAT+AGG 0.447193 8:-25235858 None:intergenic
AAAATGCATGGACATGTTAG+AGG 0.451013 8:-25235996 None:intergenic
CTGCAAAATGAAACGTTCCT+TGG 0.454959 8:-25229958 None:intergenic
AATACGCATGAGTAACTTAG+AGG 0.455089 8:-25230011 None:intergenic
AACTTGGTGAAGAGCTTTGA+GGG 0.457519 8:-25235925 None:intergenic
AGTAACTAGTGAGAATTAGA+TGG 0.459047 8:-25236154 None:intergenic
TTTGCTATGAAGCTCTTGCT+AGG 0.463484 8:+25230068 MsG0880043464.01.T01:CDS
TCATTCCTCCTCAGATCACT+TGG 0.466936 8:+25235949 MsG0880043464.01.T01:CDS
CAAATTCTCGAGCCAAAGCT+TGG 0.467986 8:-25236099 None:intergenic
AAACTTGGTGAAGAGCTTTG+AGG 0.503962 8:-25235926 None:intergenic
TCATCAACCACTTTCATCAC+TGG 0.504907 8:+25236024 MsG0880043464.01.T01:CDS
TTGCTATGAAGCTCTTGCTA+GGG 0.514592 8:+25230069 MsG0880043464.01.T01:CDS
TTTGTCTCTAGGTACTTGCC+TGG 0.516400 8:+25236118 MsG0880043464.01.T01:CDS
CATTCCTCCTCAGATCACTT+GGG 0.532364 8:+25235950 MsG0880043464.01.T01:CDS
GCATCAAGACGTTTATGAGC+TGG 0.532888 8:-25230034 None:intergenic
TGGCTCGAGAATTTGTCTCT+AGG 0.535132 8:+25236107 MsG0880043464.01.T01:CDS
ACTAGTGAGAATTAGATGGC+TGG 0.550122 8:-25236150 None:intergenic
GCGCTGCATTGTCGCAAGAG+TGG 0.559032 8:-25235870 None:intergenic
GATGGCTGGAATCTTACTCC+AGG 0.577857 8:-25236136 None:intergenic
TCTGAGGAGGAATGAAAACT+TGG 0.592858 8:-25235941 None:intergenic
ATTTGTTCCCAAGTGATCTG+AGG 0.614152 8:-25235957 None:intergenic
TGTTCCCAAGTGATCTGAGG+AGG 0.621503 8:-25235954 None:intergenic
CTCAAGTCCAGTGATGAAAG+TGG 0.626559 8:-25236031 None:intergenic
TTGATGAGGATCAAAATGCA+TGG 0.659360 8:-25236008 None:intergenic
AGTGATGAAAGTGGTTGATG+AGG 0.671964 8:-25236022 None:intergenic
ATGGAGCTAGCGATATTGGG+AGG 0.696834 8:-25235892 None:intergenic
GAGCAACACAACCATAAACA+GGG 0.712463 8:-25230099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATATATTATTAAAAA+GGG + Chr8:25234738-25234757 MsG0880043464.01.T01:intron 0.0%
!! AAAAAGTTTGTATATTTATA+AGG - Chr8:25231326-25231345 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - Chr8:25231036-25231055 None:intergenic 10.0%
!! AATTAAAGTTATATTGTATT+GGG - Chr8:25230972-25230991 None:intergenic 10.0%
!! TAAAGAATAATTTCTTAATT+TGG + Chr8:25235087-25235106 MsG0880043464.01.T01:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - Chr8:25231037-25231056 None:intergenic 10.0%
!! TAATTAAAGTTATATTGTAT+TGG - Chr8:25230973-25230992 None:intergenic 10.0%
!! TTAAAATCGATTATTATTAA+GGG + Chr8:25231283-25231302 MsG0880043464.01.T01:intron 10.0%
!! TTATTATTATTGAATTTGTA+TGG + Chr8:25235805-25235824 MsG0880043464.01.T01:intron 10.0%
!!! AATAGTTGATTTAAAAAAAA+TGG + Chr8:25232678-25232697 MsG0880043464.01.T01:intron 10.0%
!!! ACACTTTTTTTTTATAAAAT+GGG - Chr8:25230902-25230921 None:intergenic 10.0%
!!! ATGTATTTAAAATTGTTTAA+TGG + Chr8:25234959-25234978 MsG0880043464.01.T01:intron 10.0%
!!! TATTTTTAAAATCATACAAA+TGG - Chr8:25230704-25230723 None:intergenic 10.0%
!!! TGTATTTAAAATTGTTTAAT+GGG + Chr8:25234960-25234979 MsG0880043464.01.T01:intron 10.0%
!! AAACAACAATCAAAAAAATA+AGG + Chr8:25232799-25232818 MsG0880043464.01.T01:intron 15.0%
!! AACGCTATTAATAATATTAA+TGG + Chr8:25231777-25231796 MsG0880043464.01.T01:intron 15.0%
!! GAATGATTTATTTACTTAAT+GGG + Chr8:25235301-25235320 MsG0880043464.01.T01:intron 15.0%
!! GTTAAAATCGATTATTATTA+AGG + Chr8:25231282-25231301 MsG0880043464.01.T01:intron 15.0%
!! TATTAAAAGATAGATAATTG+AGG - Chr8:25233250-25233269 None:intergenic 15.0%
!! TGAATGATTTATTTACTTAA+TGG + Chr8:25235300-25235319 MsG0880043464.01.T01:intron 15.0%
!! TGATATTATTCAAACTTTAT+TGG + Chr8:25233713-25233732 MsG0880043464.01.T01:intron 15.0%
!! TTAATATTATAACATGAACA+CGG + Chr8:25233264-25233283 MsG0880043464.01.T01:intron 15.0%
!! TTTCAAAATTATAACTACAA+AGG - Chr8:25230284-25230303 None:intergenic 15.0%
!!! AAACTCAAAGAAAAATTTTA+AGG + Chr8:25231708-25231727 MsG0880043464.01.T01:intron 15.0%
!!! AACTTTATTTTAATAAGACT+AGG - Chr8:25235419-25235438 None:intergenic 15.0%
!!! AGATAAAGATTTATACATTT+TGG - Chr8:25234445-25234464 None:intergenic 15.0%
!!! ATCACATATTTTTAAATCAT+TGG + Chr8:25230343-25230362 MsG0880043464.01.T01:intron 15.0%
!!! GACACTTTTTTTTTATAAAA+TGG - Chr8:25230903-25230922 None:intergenic 15.0%
!!! TAAGAAATTTTTCACTTTTT+AGG - Chr8:25232498-25232517 None:intergenic 15.0%
!!! TATATATTTTTAGTTGAAAG+TGG + Chr8:25235469-25235488 MsG0880043464.01.T01:intron 15.0%
!!! TATTTTCGAATTGAATTATT+CGG + Chr8:25231448-25231467 MsG0880043464.01.T01:intron 15.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr8:25231013-25231032 None:intergenic 20.0%
!! AACCAAAATCTAAAAAATCA+AGG + Chr8:25234787-25234806 MsG0880043464.01.T01:intron 20.0%
!! AACTATTCTACAAAAAATAG+TGG - Chr8:25232665-25232684 None:intergenic 20.0%
!! AATCAATGTATTGTTAAAGT+TGG + Chr8:25232840-25232859 MsG0880043464.01.T01:intron 20.0%
!! AATTCTACTAGTATATGAAA+GGG - Chr8:25235341-25235360 None:intergenic 20.0%
!! ACAAGATTTCAATTAATGAA+GGG + Chr8:25233791-25233810 MsG0880043464.01.T01:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - Chr8:25230940-25230959 None:intergenic 20.0%
!! ATAAATTGGTGGAAATTATA+TGG - Chr8:25232728-25232747 None:intergenic 20.0%
!! ATGTGAAGAATATTCTTATT+TGG - Chr8:25234395-25234414 None:intergenic 20.0%
!! CTACAATGAAGAAAAATTAA+AGG - Chr8:25230189-25230208 None:intergenic 20.0%
!! CTTACTCAATTATTATATCT+TGG - Chr8:25234091-25234110 None:intergenic 20.0%
!! CTTTAATCTTGCTTATATAT+TGG + Chr8:25230589-25230608 MsG0880043464.01.T01:intron 20.0%
!! GTAACAAAGTCAAAATTAAA+TGG - Chr8:25235256-25235275 None:intergenic 20.0%
!! TAATCACATATTATTTCATG+TGG - Chr8:25234135-25234154 None:intergenic 20.0%
!! TAGATAGTGAATTTAATACT+TGG - Chr8:25233140-25233159 None:intergenic 20.0%
!! TCATTCATTAAATGATTATG+TGG - Chr8:25233572-25233591 None:intergenic 20.0%
!! TTGGTTAGTATAAATTTCTA+AGG + Chr8:25232859-25232878 MsG0880043464.01.T01:intron 20.0%
!!! ATTTTTTGAAGAACTAAAAG+TGG - Chr8:25231375-25231394 None:intergenic 20.0%
!!! CAAAGAAAAATTTTAAGGAT+AGG + Chr8:25231713-25231732 MsG0880043464.01.T01:intron 20.0%
!!! CATTTTTTTTTCTTTTCGAT+AGG + Chr8:25234651-25234670 MsG0880043464.01.T01:intron 20.0%
!!! GAAGGCTTTAAAATAAAAAA+TGG - Chr8:25230553-25230572 None:intergenic 20.0%
!!! GGTAATGTTTTTGTAAAATA+AGG - Chr8:25232158-25232177 None:intergenic 20.0%
!!! GTAAAGGTAGTATATATTTT+TGG - Chr8:25232136-25232155 None:intergenic 20.0%
!!! GTTAAACAACTTTAGAATAT+AGG - Chr8:25235364-25235383 None:intergenic 20.0%
!!! GTTTTTGTAAAATAAGGTAA+AGG - Chr8:25232152-25232171 None:intergenic 20.0%
!!! TAACAATACATTGATTTCAT+TGG - Chr8:25232836-25232855 None:intergenic 20.0%
!!! TAAGAAACTTTTCACTTTTT+AGG + Chr8:25232409-25232428 MsG0880043464.01.T01:intron 20.0%
!!! TATATTTTTGGACTCAAATA+TGG - Chr8:25232124-25232143 None:intergenic 20.0%
!!! TGATTTTTTAGATTTTGGTT+CGG - Chr8:25234787-25234806 None:intergenic 20.0%
!!! TTCCTTGATTTTTTAGATTT+TGG - Chr8:25234792-25234811 None:intergenic 20.0%
! AAAGACTATGAGTCAATAAA+TGG + Chr8:25233205-25233224 MsG0880043464.01.T01:intron 25.0%
! AAGACTATGAGTCAATAAAT+GGG + Chr8:25233206-25233225 MsG0880043464.01.T01:intron 25.0%
! ACAAAGTTAAACATAAAGAG+AGG - Chr8:25230524-25230543 None:intergenic 25.0%
! ACTTTCTTAACACATAATGT+TGG - Chr8:25230457-25230476 None:intergenic 25.0%
! AGAAAAAAAAGCAAAGAAAG+CGG + Chr8:25234835-25234854 MsG0880043464.01.T01:intron 25.0%
! AGTTGAAAATAAAGAATCAC+TGG + Chr8:25235435-25235454 MsG0880043464.01.T01:intron 25.0%
! ATAAAAATAAGGACCAAAAG+TGG - Chr8:25231406-25231425 None:intergenic 25.0%
! ATGTATAAATAAAGGGAAAG+TGG - Chr8:25231029-25231048 None:intergenic 25.0%
! ATTCAGAGAATACAAACTAA+AGG - Chr8:25232570-25232589 None:intergenic 25.0%
! CACAAGATTTCAATTAATGA+AGG + Chr8:25233790-25233809 MsG0880043464.01.T01:intron 25.0%
! CATTCAATAATTGATGTATG+TGG + Chr8:25232434-25232453 MsG0880043464.01.T01:intron 25.0%
! CATTCAATAATTGATGTATG+TGG - Chr8:25232453-25232434 None:intergenic 25.0%
! CTTTCTTAACACATAATGTT+GGG - Chr8:25230456-25230475 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr8:25231014-25231033 None:intergenic 25.0%
! GAATTCTACTAGTATATGAA+AGG - Chr8:25235342-25235361 None:intergenic 25.0%
! GCATTCATTATCTTTCAATT+AGG + Chr8:25234186-25234205 MsG0880043464.01.T01:intron 25.0%
! GTAACTTATCACTTAAACAA+TGG - Chr8:25234219-25234238 None:intergenic 25.0%
! GTTGGATAATAATGTCTAAA+TGG - Chr8:25233650-25233669 None:intergenic 25.0%
! TAATTTCCACCAATTTATTG+AGG + Chr8:25232730-25232749 MsG0880043464.01.T01:intron 25.0%
! TATATGAGGGGATATAAAAT+TGG + Chr8:25233888-25233907 MsG0880043464.01.T01:intron 25.0%
! TCATTCAATCTATGATGTAT+AGG + Chr8:25233533-25233552 MsG0880043464.01.T01:intron 25.0%
! TCTACTTGATTATATATGCT+TGG - Chr8:25232090-25232109 None:intergenic 25.0%
! TGAGATTGTAATAATTGTCA+TGG + Chr8:25234532-25234551 MsG0880043464.01.T01:intron 25.0%
! TGTTGAGAGAAATTAAACAA+GGG - Chr8:25235152-25235171 None:intergenic 25.0%
! TTGTTGAGAGAAATTAAACA+AGG - Chr8:25235153-25235172 None:intergenic 25.0%
!! AAATTTCTTACATTTGAGAC+CGG + Chr8:25232508-25232527 MsG0880043464.01.T01:intron 25.0%
!! ACTTTTCCTTGTTCTATTAT+TGG - Chr8:25234283-25234302 None:intergenic 25.0%
!! ATTCACTATTGTATTAGTCT+GGG + Chr8:25231250-25231269 MsG0880043464.01.T01:intron 25.0%
!! ATTTATTTACTTAATGGGTC+TGG + Chr8:25235306-25235325 MsG0880043464.01.T01:intron 25.0%
!! CTTTTCCTTGTTCTATTATT+GGG - Chr8:25234282-25234301 None:intergenic 25.0%
!! TAAGTATCTAACTAGTGTTT+TGG - Chr8:25232179-25232198 None:intergenic 25.0%
!! TCAAACTTTATTGGTAACTT+AGG + Chr8:25233722-25233741 MsG0880043464.01.T01:intron 25.0%
!! TTGAAATGGATCAGTTATTT+TGG - Chr8:25230926-25230945 None:intergenic 25.0%
!!! AACTTTTGAACTTTGAAAAG+AGG + Chr8:25232347-25232366 MsG0880043464.01.T01:intron 25.0%
!!! ACTTTTGAACTTTGAAAAGA+GGG + Chr8:25232348-25232367 MsG0880043464.01.T01:intron 25.0%
!!! ATAAAATTGGTTTTCTAGCA+GGG + Chr8:25233901-25233920 MsG0880043464.01.T01:intron 25.0%
!!! ATATTTTAAAGAGATAGTGG+TGG + Chr8:25232918-25232937 MsG0880043464.01.T01:intron 25.0%
!!! ATGTTTTGTTGCTTTTCTAA+AGG + Chr8:25230427-25230446 MsG0880043464.01.T01:intron 25.0%
!!! CAAGTGTTGACATAAAAATA+AGG - Chr8:25231417-25231436 None:intergenic 25.0%
!!! CTCTCATTTTAAGTTGTTTT+AGG + Chr8:25230235-25230254 MsG0880043464.01.T01:intron 25.0%
!!! GATGTTTATCTTGTTTTATC+TGG + Chr8:25233180-25233199 MsG0880043464.01.T01:intron 25.0%
!!! GCAATATTTTAAAGAGATAG+TGG + Chr8:25232915-25232934 MsG0880043464.01.T01:intron 25.0%
!!! TATAAAATTGGTTTTCTAGC+AGG + Chr8:25233900-25233919 MsG0880043464.01.T01:intron 25.0%
!!! TGAAATGGATCAGTTATTTT+GGG - Chr8:25230925-25230944 None:intergenic 25.0%
AAGTTGTGTAATTAGTGCAT+TGG + Chr8:25235043-25235062 MsG0880043464.01.T01:intron 30.0%
AATAAGACTAGGCTCTTAAT+TGG - Chr8:25235408-25235427 None:intergenic 30.0%
AATACCTACCTACACTTATA+GGG - Chr8:25232049-25232068 None:intergenic 30.0%
ACACATTTAAGTGGAAAAGT+CGG + Chr8:25234561-25234580 MsG0880043464.01.T01:intron 30.0%
AGGTAAAGATAAACTCATGT+TGG - Chr8:25230401-25230420 None:intergenic 30.0%
ATAAAATGGGTCAGATATTC+CGG - Chr8:25230889-25230908 None:intergenic 30.0%
ATATTCCAGTGAAGTATATG+AGG + Chr8:25233874-25233893 MsG0880043464.01.T01:intron 30.0%
ATCACTTAAACAATGGAATC+CGG - Chr8:25234212-25234231 None:intergenic 30.0%
ATGTGGATGAATATCTAAAG+AGG - Chr8:25234118-25234137 None:intergenic 30.0%
CATTCACTATTGTATTAGTC+TGG + Chr8:25231249-25231268 MsG0880043464.01.T01:intron 30.0%
GAAAATATACATACAAGAGG+GGG + Chr8:25234761-25234780 MsG0880043464.01.T01:intron 30.0%
GATGTATGTGGTCTATAATA+TGG - Chr8:25232461-25232480 None:intergenic 30.0%
GGAAAATATACATACAAGAG+GGG + Chr8:25234760-25234779 MsG0880043464.01.T01:intron 30.0%
GGGAAAATATACATACAAGA+GGG + Chr8:25234759-25234778 MsG0880043464.01.T01:intron 30.0%
GTACTTAATTCGTATTTGGT+TGG - Chr8:25234241-25234260 None:intergenic 30.0%
GTGAGTACTTAATTCGTATT+TGG - Chr8:25234245-25234264 None:intergenic 30.0%
TAATACCTACCTACACTTAT+AGG - Chr8:25232050-25232069 None:intergenic 30.0%
TACACTTAGACTAATGATGT+TGG - Chr8:25233668-25233687 None:intergenic 30.0%
TAGAACAAGGAAAAGTTGTT+TGG + Chr8:25234287-25234306 MsG0880043464.01.T01:intron 30.0%
TAGGTAGGTATTATGTTTCA+TGG + Chr8:25232057-25232076 MsG0880043464.01.T01:intron 30.0%
TATAGGAACTAGTTAAAGCA+AGG + Chr8:25233963-25233982 MsG0880043464.01.T01:intron 30.0%
TATTCCAGTGAAGTATATGA+GGG + Chr8:25233875-25233894 MsG0880043464.01.T01:intron 30.0%
TCATGATGTCTTTCAATTTG+AGG + Chr8:25235175-25235194 MsG0880043464.01.T01:intron 30.0%
TCATTATCTTTCAATTAGGC+CGG + Chr8:25234190-25234209 MsG0880043464.01.T01:intron 30.0%
TGAGTTTATCTTTACCTCTT+TGG + Chr8:25230404-25230423 MsG0880043464.01.T01:intron 30.0%
TGGAAAATCACACATTTAAG+TGG + Chr8:25234552-25234571 MsG0880043464.01.T01:intron 30.0%
TTAATTCTTATGTTCACCCT+CGG + Chr8:25233479-25233498 MsG0880043464.01.T01:intron 30.0%
TTAGTCTAAGTGTAATGTCA+TGG + Chr8:25233674-25233693 MsG0880043464.01.T01:intron 30.0%
TTATTGAATTTGTATGGTGC+AGG + Chr8:25235811-25235830 MsG0880043464.01.T01:intron 30.0%
TTTGCTTATATAGTAACCGA+GGG - Chr8:25233498-25233517 None:intergenic 30.0%
! AAAATTTCAGTCACCACTTT+TGG + Chr8:25231390-25231409 MsG0880043464.01.T01:intron 30.0%
! ACTAAAGGCACAATATATAG+AGG - Chr8:25232555-25232574 None:intergenic 30.0%
! AGTGGCATGTTTTATAATTG+GGG + Chr8:25234489-25234508 MsG0880043464.01.T01:intron 30.0%
! ATTTTGCTTTATATAGTGCC+GGG + Chr8:25233605-25233624 MsG0880043464.01.T01:intron 30.0%
! CAGTGGCATGTTTTATAATT+GGG + Chr8:25234488-25234507 MsG0880043464.01.T01:intron 30.0%
! GATTTTGCTTTATATAGTGC+CGG + Chr8:25233604-25233623 MsG0880043464.01.T01:intron 30.0%
! TATGTGTTTTGCTTCTGATA+AGG - Chr8:25235773-25235792 None:intergenic 30.0%
! TTTTGCTTATATAGTAACCG+AGG - Chr8:25233499-25233518 None:intergenic 30.0%
!! CTTTCTAAAAGTTTTAACGC+TGG - Chr8:25233366-25233385 None:intergenic 30.0%
!!! TATAGAGTTTTGTTGACTCA+TGG + Chr8:25231808-25231827 MsG0880043464.01.T01:intron 30.0%
AAAAGAGGGTCCATCTAATA+CGG + Chr8:25232362-25232381 MsG0880043464.01.T01:intron 35.0%
AAAATGCATGGACATGTTAG+AGG - Chr8:25235999-25236018 None:intergenic 35.0%
AAGAGTCCACCTCAATAAAT+TGG - Chr8:25232742-25232761 None:intergenic 35.0%
AAGCAACAAAACATCCAAAG+AGG - Chr8:25230421-25230440 None:intergenic 35.0%
AATACGCATGAGTAACTTAG+AGG - Chr8:25230014-25230033 None:intergenic 35.0%
AATTTCATTGCTTGTAGCTC+CGG - Chr8:25232995-25233014 None:intergenic 35.0%
ACGTAAACAATGCATACCTT+TGG - Chr8:25235203-25235222 None:intergenic 35.0%
AGTAGCATCCATGTAAAATG+TGG - Chr8:25232014-25232033 None:intergenic 35.0%
ATACCTACCTACACTTATAG+GGG - Chr8:25232048-25232067 None:intergenic 35.0%
ATATTATTAGTAGGCAGCAG+AGG - Chr8:25234727-25234746 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + Chr8:25231057-25231076 MsG0880043464.01.T01:intron 35.0%
ATGAGATCGAATCCAATCTT+GGG + Chr8:25233334-25233353 MsG0880043464.01.T01:intron 35.0%
ATTCCAGTGAAGTATATGAG+GGG + Chr8:25233876-25233895 MsG0880043464.01.T01:intron 35.0%
ATTGGATTCGATCTCATCTA+GGG - Chr8:25233331-25233350 None:intergenic 35.0%
CCAATTATAAAACATGCCAC+TGG - Chr8:25234490-25234509 None:intergenic 35.0%
CTAGGCTCTTAATTGGAATT+TGG - Chr8:25235401-25235420 None:intergenic 35.0%
CTCTACCCAATAATAGAACA+AGG + Chr8:25234274-25234293 MsG0880043464.01.T01:intron 35.0%
GGGGAAAATATACATACAAG+AGG + Chr8:25234758-25234777 MsG0880043464.01.T01:intron 35.0%
GGTGAAGCTATCATATAATG+AGG + Chr8:25235490-25235509 MsG0880043464.01.T01:intron 35.0%
GTTTGTATTCTCTGAATCAC+CGG + Chr8:25232573-25232592 MsG0880043464.01.T01:intron 35.0%
TAAAATGGGTCAGATATTCC+GGG - Chr8:25230888-25230907 None:intergenic 35.0%
TAAACACCTGTTCTAATGTC+TGG + Chr8:25234588-25234607 MsG0880043464.01.T01:intron 35.0%
TACAATAGTGAATGCACGAT+AGG - Chr8:25231243-25231262 None:intergenic 35.0%
TATTCCAATGCACTCAACTA+CGG - Chr8:25235734-25235753 None:intergenic 35.0%
TCACATGCATGCACATAATT+TGG + Chr8:25234409-25234428 MsG0880043464.01.T01:intron 35.0%
TTGATGAGGATCAAAATGCA+TGG - Chr8:25236011-25236030 None:intergenic 35.0%
TTTCCACCAATTTATTGAGG+TGG + Chr8:25232733-25232752 MsG0880043464.01.T01:intron 35.0%
! AACCATATGAGCAGGTTTTT+CGG - Chr8:25234619-25234638 None:intergenic 35.0%
! ACATGGATGCTACTTAACTA+GGG + Chr8:25232020-25232039 MsG0880043464.01.T01:intron 35.0%
! CCAGTGGCATGTTTTATAAT+TGG + Chr8:25234487-25234506 MsG0880043464.01.T01:intron 35.0%
! CTTTCAATTTGAGGTTCCAA+AGG + Chr8:25235184-25235203 MsG0880043464.01.T01:intron 35.0%
! TACATGGATGCTACTTAACT+AGG + Chr8:25232019-25232038 MsG0880043464.01.T01:intron 35.0%
! TAGAGGTTATTTCCAGGTTA+AGG - Chr8:25235581-25235600 None:intergenic 35.0%
! TCCTACAACACTCGTTTTAA+GGG - Chr8:25234901-25234920 None:intergenic 35.0%
! TTCCTACAACACTCGTTTTA+AGG - Chr8:25234902-25234921 None:intergenic 35.0%
! TTCTTACATTTGAGACCGAA+GGG - Chr8:25232395-25232414 None:intergenic 35.0%
! TTTCTTACATTTGAGACCGA+AGG - Chr8:25232396-25232415 None:intergenic 35.0%
! TTTTCGATAGGCTAAGAGAT+AGG + Chr8:25234663-25234682 MsG0880043464.01.T01:intron 35.0%
! TTTTGCTTTATATAGTGCCG+GGG + Chr8:25233606-25233625 MsG0880043464.01.T01:intron 35.0%
!! AATAAATGGGCTAACGACTA+AGG + Chr8:25233219-25233238 MsG0880043464.01.T01:intron 35.0%
!! ACATAAAGAGAGGAAGTACT+AGG - Chr8:25230514-25230533 None:intergenic 35.0%
!! AGAGTATTTTCACGTCTTGA+AGG - Chr8:25230571-25230590 None:intergenic 35.0%
!! AGTCAAGCATTTTAACGTGA+TGG + Chr8:25230735-25230754 MsG0880043464.01.T01:intron 35.0%
!! CATAAAGAGAGGAAGTACTA+GGG - Chr8:25230513-25230532 None:intergenic 35.0%
!! GTTGTTTCTATACCTTAACC+TGG + Chr8:25235566-25235585 MsG0880043464.01.T01:intron 35.0%
!! TAGCTTGTCCACATTTTACA+TGG + Chr8:25232003-25232022 MsG0880043464.01.T01:intron 35.0%
!! TTTTAAAGAGATAGTGGTGG+TGG + Chr8:25232921-25232940 MsG0880043464.01.T01:intron 35.0%
AACCGAAAAACCTGCTCATA+TGG + Chr8:25234614-25234633 MsG0880043464.01.T01:intron 40.0%
AAGGCACAATATATAGAGGC+TGG - Chr8:25232551-25232570 None:intergenic 40.0%
AATAGTGAATGCACGATAGG+TGG - Chr8:25231240-25231259 None:intergenic 40.0%
AGTCCACCTCAATAAATTGG+TGG - Chr8:25232739-25232758 None:intergenic 40.0%
ATAACCTCTAATGACCTGAG+TGG + Chr8:25235591-25235610 MsG0880043464.01.T01:intron 40.0%
ATTTGTTCCCAAGTGATCTG+AGG - Chr8:25235960-25235979 None:intergenic 40.0%
CACATGTAAACCATATGAGC+AGG - Chr8:25234627-25234646 None:intergenic 40.0%
CATCTTTGCACTTCAACAAC+AGG + Chr8:25230123-25230142 MsG0880043464.01.T01:CDS 40.0%
GAGCAACACAACCATAAACA+GGG - Chr8:25230102-25230121 None:intergenic 40.0%
GAGTTTACGTTTCTTCTGCT+TGG + Chr8:25234924-25234943 MsG0880043464.01.T01:intron 40.0%
GATGAGATCGAATCCAATCT+TGG + Chr8:25233333-25233352 MsG0880043464.01.T01:intron 40.0%
GATGGCGTCAAAACAATGTT+TGG + Chr8:25235674-25235693 MsG0880043464.01.T01:intron 40.0%
GATTGGATTCGATCTCATCT+AGG - Chr8:25233332-25233351 None:intergenic 40.0%
GTTAGACCAGACATTAGAAC+AGG - Chr8:25234597-25234616 None:intergenic 40.0%
TAAGAGATAGGTGAGCATCA+AGG + Chr8:25234675-25234694 MsG0880043464.01.T01:intron 40.0%
TAATGACCTGAGTGGTTGTA+AGG + Chr8:25235599-25235618 MsG0880043464.01.T01:intron 40.0%
TAGGGCACATATTCTTTGTG+TGG - Chr8:25230495-25230514 None:intergenic 40.0%
TATCCCCTCATATACTTCAC+TGG - Chr8:25233882-25233901 None:intergenic 40.0%
TATTGTGAGACCCAAATGGA+CGG - Chr8:25233395-25233414 None:intergenic 40.0%
TCATCAACCACTTTCATCAC+TGG + Chr8:25236024-25236043 MsG0880043464.01.T01:CDS 40.0%
TCATGCTAACAAGTGCATCA+AGG - Chr8:25231193-25231212 None:intergenic 40.0%
TCTGAGGAGGAATGAAAACT+TGG - Chr8:25235944-25235963 None:intergenic 40.0%
TGAGCAACACAACCATAAAC+AGG - Chr8:25230103-25230122 None:intergenic 40.0%
TTGCTATGAAGCTCTTGCTA+GGG + Chr8:25230069-25230088 MsG0880043464.01.T01:CDS 40.0%
TTTAAGGGTGAACTCAAGGA+TGG - Chr8:25234886-25234905 None:intergenic 40.0%
! AAACTTGGTGAAGAGCTTTG+AGG - Chr8:25235929-25235948 None:intergenic 40.0%
! AACTTGGTGAAGAGCTTTGA+GGG - Chr8:25235928-25235947 None:intergenic 40.0%
! ACCCTTAAAACGAGTGTTGT+AGG + Chr8:25234897-25234916 MsG0880043464.01.T01:intron 40.0%
! AGTGATGAAAGTGGTTGATG+AGG - Chr8:25236025-25236044 None:intergenic 40.0%
! CAAACTGGCTCAGATAAAAC+GGG + Chr8:25231072-25231091 MsG0880043464.01.T01:intron 40.0%
! CCAAACTGGCTCAGATAAAA+CGG + Chr8:25231071-25231090 MsG0880043464.01.T01:intron 40.0%
! GGTCATTAGAGGTTATTTCC+AGG - Chr8:25235587-25235606 None:intergenic 40.0%
! TGATGATGAACTCCAAGCTT+TGG + Chr8:25236087-25236106 MsG0880043464.01.T01:CDS 40.0%
! TTCTTACATTTGAGACCGGA+GGG + Chr8:25232512-25232531 MsG0880043464.01.T01:intron 40.0%
! TTTCTTACATTTGAGACCGG+AGG + Chr8:25232511-25232530 MsG0880043464.01.T01:intron 40.0%
! TTTGCTATGAAGCTCTTGCT+AGG + Chr8:25230068-25230087 MsG0880043464.01.T01:CDS 40.0%
!!! ATTGTTTTGACGCCATCGAA+AGG - Chr8:25235671-25235690 None:intergenic 40.0%
!!! TCGTTTTAAGGGTGAACTCA+AGG - Chr8:25234890-25234909 None:intergenic 40.0%
AAAGAGCTTGCCGTCCATTT+GGG + Chr8:25233382-25233401 MsG0880043464.01.T01:intron 45.0%
AAATGTTAACCAGTGCCCCA+GGG + Chr8:25234983-25235002 MsG0880043464.01.T01:intron 45.0%
AAGCGACAATACTAGAGTGC+AGG - Chr8:25231882-25231901 None:intergenic 45.0%
ACAACCACTCAGGTCATTAG+AGG - Chr8:25235598-25235617 None:intergenic 45.0%
AGAGATGGAGCTAGCGATAT+TGG - Chr8:25235899-25235918 None:intergenic 45.0%
ATTCTCTGAATCACCGGTCT+CGG + Chr8:25232579-25232598 MsG0880043464.01.T01:intron 45.0%
CAAATTCTCGAGCCAAAGCT+TGG - Chr8:25236102-25236121 None:intergenic 45.0%
CATTCCTCCTCAGATCACTT+GGG + Chr8:25235950-25235969 MsG0880043464.01.T01:CDS 45.0%
CTCAAGTCCAGTGATGAAAG+TGG - Chr8:25236034-25236053 None:intergenic 45.0%
CTCTGACATTTCATTGCCAG+TGG + Chr8:25234471-25234490 MsG0880043464.01.T01:intron 45.0%
GAGATGGAGCTAGCGATATT+GGG - Chr8:25235898-25235917 None:intergenic 45.0%
GAGCAACACCTTCACTTCAA+GGG - Chr8:25234861-25234880 None:intergenic 45.0%
GAGTAAGATCTTGACCTACG+AGG - Chr8:25231927-25231946 None:intergenic 45.0%
GCATCAAGACGTTTATGAGC+TGG - Chr8:25230037-25230056 None:intergenic 45.0%
GGACTATTCACTATCGCCAT+GGG - Chr8:25235713-25235732 None:intergenic 45.0%
GTACCCCTATAAGTGTAGGT+AGG + Chr8:25232042-25232061 MsG0880043464.01.T01:intron 45.0%
TAAACAAAACACCCTCACCC+CGG - Chr8:25233626-25233645 None:intergenic 45.0%
TAATACGGACGTACTCCCTT+CGG + Chr8:25232377-25232396 MsG0880043464.01.T01:intron 45.0%
TAGTCCGTAGTTGAGTGCAT+TGG + Chr8:25235727-25235746 MsG0880043464.01.T01:intron 45.0%
TATTAGTAGGCAGCAGAGGA+TGG - Chr8:25234723-25234742 None:intergenic 45.0%
TCACTGTTTGCATTCCTCGT+AGG + Chr8:25231910-25231929 MsG0880043464.01.T01:intron 45.0%
TCATTCCTCCTCAGATCACT+TGG + Chr8:25235949-25235968 MsG0880043464.01.T01:CDS 45.0%
TGAGCAACACCTTCACTTCA+AGG - Chr8:25234862-25234881 None:intergenic 45.0%
TGGCTCGAGAATTTGTCTCT+AGG + Chr8:25236107-25236126 MsG0880043464.01.T01:CDS 45.0%
TTGGGTCTCACAATACTCGA+AGG + Chr8:25233400-25233419 MsG0880043464.01.T01:intron 45.0%
TTTGTCTCTAGGTACTTGCC+TGG + Chr8:25236118-25236137 MsG0880043464.01.T01:CDS 45.0%
! ATTAGTCTCCGCATTGCATG+CGG + Chr8:25233423-25233442 MsG0880043464.01.T01:intron 45.0%
! CCGTTTTATCTGAGCCAGTT+TGG - Chr8:25231074-25231093 None:intergenic 45.0%
! CGAGTATTGTGAGACCCAAA+TGG - Chr8:25233399-25233418 None:intergenic 45.0%
! CTTTGAGGGTTTGGAAGAGA+TGG - Chr8:25235914-25235933 None:intergenic 45.0%
! GCAGCAGTTCACAAAGTGTT+TGG + Chr8:25229977-25229996 MsG0880043464.01.T01:CDS 45.0%
! TAGGGTACCCCTATAAGTGT+AGG + Chr8:25232038-25232057 MsG0880043464.01.T01:intron 45.0%
! TTTATATAGTGCCGGGGTGA+GGG + Chr8:25233612-25233631 MsG0880043464.01.T01:intron 45.0%
! TTTCTAGCAGGGACAATGGA+TGG + Chr8:25233912-25233931 MsG0880043464.01.T01:intron 45.0%
!! ATTTGGCCTTACAACCACTC+AGG - Chr8:25235608-25235627 None:intergenic 45.0%
!! TGGTTTTCTAGCAGGGACAA+TGG + Chr8:25233908-25233927 MsG0880043464.01.T01:intron 45.0%
!!! GGATGTTGTTTTACTCCCTC+CGG - Chr8:25232530-25232549 None:intergenic 45.0%
!! AATAATATATTATTAAAAAG+GGG + Chr8:25234739-25234758 MsG0880043464.01.T01:intron 5.0%
!! ATATGTTAAAAAATTTAAAA+AGG - Chr8:25231168-25231187 None:intergenic 5.0%
!! CTAATAATATATTATTAAAA+AGG + Chr8:25234737-25234756 MsG0880043464.01.T01:intron 5.0%
!! TTTAATAATATATTATTAGT+AGG - Chr8:25234736-25234755 None:intergenic 5.0%
AAAGCCCTTAACTAGTGCCC+TGG - Chr8:25235003-25235022 None:intergenic 50.0%
AAGCCCTTAACTAGTGCCCT+GGG - Chr8:25235002-25235021 None:intergenic 50.0%
ACACATGTGCTGTGAGTGTG+AGG - Chr8:25232209-25232228 None:intergenic 50.0%
AGCATCAAGGTGAGTCTGGA+GGG + Chr8:25234688-25234707 MsG0880043464.01.T01:intron 50.0%
AGGGCTAGAGACCCTGTTTA+TGG + Chr8:25230088-25230107 MsG0880043464.01.T01:CDS 50.0%
AGTATCCTCCGCATGCAATG+CGG - Chr8:25233434-25233453 None:intergenic 50.0%
ATGGAGCTAGCGATATTGGG+AGG - Chr8:25235895-25235914 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG - Chr8:25230884-25230903 None:intergenic 50.0%
CAACTGGGTATGGCTGACTA+CGG + Chr8:25232951-25232970 MsG0880043464.01.T01:intron 50.0%
CACATGTGCTGTGAGTGTGA+GGG - Chr8:25232208-25232227 None:intergenic 50.0%
CATTGCATGCGGAGGATACT+CGG + Chr8:25233434-25233453 MsG0880043464.01.T01:intron 50.0%
CCAAATCCTTTGCCACTCCA+GGG + Chr8:25235622-25235641 MsG0880043464.01.T01:intron 50.0%
CGCAAGAGTGGCTTGAACAT+AGG - Chr8:25235861-25235880 None:intergenic 50.0%
CGGACTATTCACTATCGCCA+TGG - Chr8:25235714-25235733 None:intergenic 50.0%
CTATTCACTATCGCCATGGG+TGG - Chr8:25235710-25235729 None:intergenic 50.0%
CTCAGATAAAACGGGACGGA+GGG + Chr8:25231080-25231099 MsG0880043464.01.T01:intron 50.0%
CTGGCTCAGATAAAACGGGA+CGG + Chr8:25231076-25231095 MsG0880043464.01.T01:intron 50.0%
CTTCCAGGTTCACCTTTCGA+TGG + Chr8:25235656-25235675 MsG0880043464.01.T01:intron 50.0%
GAAAGAGCTTGCCGTCCATT+TGG + Chr8:25233381-25233400 MsG0880043464.01.T01:intron 50.0%
GAAATGTTAACCAGTGCCCC+AGG + Chr8:25234982-25235001 MsG0880043464.01.T01:intron 50.0%
GATGGCTGGAATCTTACTCC+AGG - Chr8:25236139-25236158 None:intergenic 50.0%
GTTCGTCTTGAGCAGTGATC+TGG + Chr8:25232601-25232620 MsG0880043464.01.T01:intron 50.0%
TCTTGTTAACGAGTGTCCCC+GGG - Chr8:25235129-25235148 None:intergenic 50.0%
TGTTCCCAAGTGATCTGAGG+AGG - Chr8:25235957-25235976 None:intergenic 50.0%
! CTTTATATAGTGCCGGGGTG+AGG + Chr8:25233611-25233630 MsG0880043464.01.T01:intron 50.0%
! GGGAGTACGTCCGTATTAGA+TGG - Chr8:25232375-25232394 None:intergenic 50.0%
! GTCTTGTTAACGAGTGTCCC+CGG - Chr8:25235130-25235149 None:intergenic 50.0%
!! GGTGAAGAGCTTTGAGGGTT+TGG - Chr8:25235923-25235942 None:intergenic 50.0%
ACGCCATCGAAAGGTGAACC+TGG - Chr8:25235662-25235681 None:intergenic 55.0%
ACTATGTACTCCCTCCGTCC+CGG + Chr8:25230867-25230886 MsG0880043464.01.T01:intron 55.0%
AGCCCTTAACTAGTGCCCTG+GGG - Chr8:25235001-25235020 None:intergenic 55.0%
AGTCAGCCATACCCAGTTGG+CGG - Chr8:25232950-25232969 None:intergenic 55.0%
CCCTGGAGTGGCAAAGGATT+TGG - Chr8:25235625-25235644 None:intergenic 55.0%
CGCTGGTACATGCCCAAGAT+TGG - Chr8:25233349-25233368 None:intergenic 55.0%
CGTAGTCAGCCATACCCAGT+TGG - Chr8:25232953-25232972 None:intergenic 55.0%
CTTGTTAACGAGTGTCCCCG+GGG - Chr8:25235128-25235147 None:intergenic 55.0%
GAAAGCGGCCCTTGAAGTGA+AGG + Chr8:25234850-25234869 MsG0880043464.01.T01:intron 55.0%
GAGCATCAAGGTGAGTCTGG+AGG + Chr8:25234687-25234706 MsG0880043464.01.T01:intron 55.0%
GATCATGCTAACGTGCACCG+TGG + Chr8:25231848-25231867 MsG0880043464.01.T01:intron 55.0%
GCCAAATCCTTTGCCACTCC+AGG + Chr8:25235621-25235640 MsG0880043464.01.T01:intron 55.0%
GCTCAGATAAAACGGGACGG+AGG + Chr8:25231079-25231098 MsG0880043464.01.T01:intron 55.0%
GGTGAGCATCAAGGTGAGTC+TGG + Chr8:25234684-25234703 MsG0880043464.01.T01:intron 55.0%
GGTGCAGGTTATGAGCTTGC+AGG + Chr8:25235826-25235845 MsG0880043464.01.T01:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - Chr8:25230880-25230899 None:intergenic 55.0%
TGCTCAAGACGAACCGAGAC+CGG - Chr8:25232595-25232614 None:intergenic 55.0%
! GAGGACTGTCTGTTGCTTGC+CGG + Chr8:25232973-25232992 MsG0880043464.01.T01:intron 55.0%
! TGCCCCAGGGCACTAGTTAA+GGG + Chr8:25234996-25235015 MsG0880043464.01.T01:intron 55.0%
!! CATGCTTAAAGAGTGCCCCG+GGG + Chr8:25235110-25235129 MsG0880043464.01.T01:intron 55.0%
!! GCATGCTTAAAGAGTGCCCC+GGG + Chr8:25235109-25235128 MsG0880043464.01.T01:intron 55.0%
!! GGCATGCTTAAAGAGTGCCC+CGG + Chr8:25235108-25235127 MsG0880043464.01.T01:intron 55.0%
AGGGTCGATCTGGTGCTTCC+AGG + Chr8:25235641-25235660 MsG0880043464.01.T01:intron 60.0%
AGTCTCCGCATTGCATGCGG+AGG + Chr8:25233426-25233445 MsG0880043464.01.T01:intron 60.0%
CTGGGTATGGCTGACTACGG+AGG + Chr8:25232954-25232973 MsG0880043464.01.T01:intron 60.0%
GAGTGCAGGACTTCGCACCA+CGG - Chr8:25231868-25231887 None:intergenic 60.0%
GATCGACCCTGGAGTGGCAA+AGG - Chr8:25235631-25235650 None:intergenic 60.0%
GCGCTGCATTGTCGCAAGAG+TGG - Chr8:25235873-25235892 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - Chr8:25230881-25230900 None:intergenic 60.0%
TAACTAGTGCCCTGGGGCAC+TGG - Chr8:25234995-25235014 None:intergenic 60.0%
TTGCCACTCCAGGGTCGATC+TGG + Chr8:25235631-25235650 MsG0880043464.01.T01:intron 60.0%
! GTGCCCCAGGGCACTAGTTA+AGG + Chr8:25234995-25235014 MsG0880043464.01.T01:intron 60.0%
!! TGGAAGCACCAGATCGACCC+TGG - Chr8:25235642-25235661 None:intergenic 60.0%
GCACCAGATCGACCCTGGAG+TGG - Chr8:25235637-25235656 None:intergenic 65.0%
TCGCCATGGGTGGCTACAGC+TGG - Chr8:25235700-25235719 None:intergenic 65.0%
TGGCAGCCGCCAACTGGGTA+TGG + Chr8:25232941-25232960 MsG0880043464.01.T01:intron 65.0%
TGGCCAGCTGTAGCCACCCA+TGG + Chr8:25235694-25235713 MsG0880043464.01.T01:intron 65.0%
! GGTGGTGGCAGCCGCCAACT+GGG + Chr8:25232936-25232955 MsG0880043464.01.T01:intron 70.0%
!! TGGTGGTGGCAGCCGCCAAC+TGG + Chr8:25232935-25232954 MsG0880043464.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 25229959 25236171 25229959 ID=MsG0880043464.01;Name=MsG0880043464.01
Chr8 mRNA 25229959 25236171 25229959 ID=MsG0880043464.01.T01;Parent=MsG0880043464.01;Name=MsG0880043464.01.T01;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|0.5|2|0|174
Chr8 exon 25229959 25230144 25229959 ID=MsG0880043464.01.T01:exon:5048;Parent=MsG0880043464.01.T01
Chr8 exon 25235833 25236171 25235833 ID=MsG0880043464.01.T01:exon:5049;Parent=MsG0880043464.01.T01
Chr8 CDS 25229959 25230144 25229959 ID=MsG0880043464.01.T01:cds;Parent=MsG0880043464.01.T01
Chr8 CDS 25235833 25236171 25235833 ID=MsG0880043464.01.T01:cds;Parent=MsG0880043464.01.T01
Gene Sequence

>MsG0880043464.01.T01

CAAGGAACGTTTCATTTTGCAGCAGTTCACAAAGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTATTCCAGCTCATAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAAGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGCTCACATCTTTGCACTTCAACAACAGGTTATGAGCTTGCAGGCAGAGTTAACCTATGTTCAAGCCACTCTTGCGACAATGCAGCGCCTCCCAATATCGCTAGCTCCATCTCTTCCAAACCCTCAAAGCTCTTCACCAAGTTTTCATTCCTCCTCAGATCACTTGGGAACAAATGCAGACATGCAAAGTACCTCTAACATGTCCATGCATTTTGATCCTCATCAACCACTTTCATCACTGGACTTGAGCAGCTTCTTCAATCAATCAGATCAACAACTTGATGATGATGAACTCCAAGCTTTGGCTCGAGAATTTGTCTCTAGGTACTTGCCTGGAGTAAGATTCCAGCCATCTAATTCTCACTAG
Protein sequence

>MsG0880043464.01.T01

QGTFHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQRLPISLAPSLPNPQSSSPSFHSSSDHLGTNADMQSTSNMSMHFDPHQPLSSLDLSSFFNQSDQQLDDDELQALAREFVSRYLPGVRFQPSNSH*