Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043755.01.T01 | XP_003627983.1 | 73.759 | 282 | 71 | 3 | 1 | 281 | 9 | 288 | 2.71E-144 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043755.01.T01 | Q8L5A7 | 47.232 | 271 | 134 | 5 | 15 | 282 | 37 | 301 | 8.25E-89 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043755.01.T01 | G7LHN4 | 73.759 | 282 | 71 | 3 | 1 | 281 | 9 | 288 | 1.30e-144 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000404.01 | MsG0880043755.01 | 0.815569 | 8.642668e-52 | 5.980298e-49 |
| MsG0180003741.01 | MsG0880043755.01 | 0.803236 | 3.837998e-49 | 1.918669e-46 |
| MsG0780041259.01 | MsG0880043755.01 | 0.827890 | 1.218495e-54 | 1.191920e-51 |
| MsG0880043755.01 | MsG0880044704.01 | 0.825304 | 5.041697e-54 | 4.578045e-51 |
| MsG0680030784.01 | MsG0880043755.01 | 0.824475 | 7.909367e-54 | 7.012971e-51 |
| MsG0680030908.01 | MsG0880043755.01 | 0.805862 | 1.087710e-49 | 5.817832e-47 |
| MsG0680031959.01 | MsG0880043755.01 | 0.804216 | 2.402847e-49 | 1.231828e-46 |
| MsG0480019340.01 | MsG0880043755.01 | 0.800596 | 1.338065e-48 | 6.255415e-46 |
| MsG0480020315.01 | MsG0880043755.01 | 0.802800 | 4.723477e-49 | 2.335320e-46 |
| MsG0480018200.01 | MsG0880043755.01 | 0.800724 | 1.259951e-48 | 5.909324e-46 |
| MsG0580027763.01 | MsG0880043755.01 | 0.818186 | 2.235009e-52 | 1.661435e-49 |
| MsG0580029736.01 | MsG0880043755.01 | 0.813891 | 2.034028e-51 | 1.344758e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043755.01.T01 | MTR_8g040820 | 73.759 | 282 | 71 | 3 | 1 | 281 | 9 | 288 | 3.29e-148 | 419 |
| MsG0880043755.01.T01 | MTR_8g040490 | 71.277 | 282 | 77 | 3 | 1 | 281 | 9 | 287 | 2.23e-143 | 408 |
| MsG0880043755.01.T01 | MTR_8g035720 | 73.704 | 270 | 67 | 3 | 14 | 281 | 83 | 350 | 2.60e-138 | 396 |
| MsG0880043755.01.T01 | MTR_8g040430 | 69.258 | 283 | 83 | 3 | 1 | 281 | 9 | 289 | 1.64e-137 | 392 |
| MsG0880043755.01.T01 | MTR_7g007710 | 66.904 | 281 | 82 | 4 | 5 | 283 | 7 | 278 | 3.68e-126 | 363 |
| MsG0880043755.01.T01 | MTR_7g007680 | 64.158 | 279 | 93 | 3 | 4 | 281 | 5 | 277 | 3.10e-121 | 352 |
| MsG0880043755.01.T01 | MTR_8g040520 | 60.140 | 286 | 100 | 9 | 1 | 281 | 9 | 285 | 1.82e-107 | 316 |
| MsG0880043755.01.T01 | MTR_3g013500 | 56.140 | 285 | 110 | 6 | 1 | 283 | 12 | 283 | 2.35e-105 | 310 |
| MsG0880043755.01.T01 | MTR_8g041790 | 58.214 | 280 | 91 | 6 | 5 | 281 | 13 | 269 | 1.50e-100 | 297 |
| MsG0880043755.01.T01 | MTR_8g014380 | 55.357 | 280 | 79 | 7 | 4 | 281 | 12 | 247 | 4.89e-93 | 276 |
| MsG0880043755.01.T01 | MTR_8g040250 | 56.716 | 268 | 82 | 3 | 15 | 281 | 5 | 239 | 3.91e-92 | 275 |
| MsG0880043755.01.T01 | MTR_8g040820 | 75.301 | 166 | 40 | 1 | 117 | 281 | 24 | 189 | 7.61e-85 | 254 |
| MsG0880043755.01.T01 | MTR_0071s0010 | 46.332 | 259 | 133 | 4 | 26 | 282 | 24 | 278 | 3.60e-83 | 253 |
| MsG0880043755.01.T01 | MTR_3g046670 | 46.332 | 259 | 133 | 4 | 26 | 282 | 24 | 278 | 3.60e-83 | 253 |
| MsG0880043755.01.T01 | MTR_8g066220 | 47.656 | 256 | 129 | 3 | 28 | 282 | 27 | 278 | 4.29e-83 | 253 |
| MsG0880043755.01.T01 | MTR_3g435130 | 44.574 | 258 | 137 | 4 | 27 | 282 | 26 | 279 | 2.05e-79 | 244 |
| MsG0880043755.01.T01 | MTR_8g040430 | 72.393 | 163 | 44 | 1 | 120 | 281 | 27 | 189 | 2.10e-78 | 238 |
| MsG0880043755.01.T01 | MTR_8g066210 | 44.747 | 257 | 122 | 3 | 27 | 282 | 26 | 263 | 5.49e-77 | 237 |
| MsG0880043755.01.T01 | MTR_8g040730 | 48.347 | 242 | 75 | 9 | 1 | 238 | 1 | 196 | 1.44e-54 | 185 |
| MsG0880043755.01.T01 | MTR_8g040730 | 59.783 | 184 | 65 | 7 | 1 | 183 | 324 | 499 | 7.05e-54 | 183 |
| MsG0880043755.01.T01 | MTR_8g066280 | 47.368 | 152 | 75 | 3 | 135 | 282 | 4 | 154 | 2.99e-45 | 152 |
| MsG0880043755.01.T01 | MTR_3g434790 | 46.094 | 128 | 67 | 2 | 156 | 282 | 53 | 179 | 1.29e-35 | 128 |
| MsG0880043755.01.T01 | MTR_8g040710 | 56.311 | 103 | 43 | 2 | 181 | 281 | 134 | 236 | 1.69e-32 | 121 |
| MsG0880043755.01.T01 | MTR_8g040315 | 87.324 | 71 | 8 | 1 | 213 | 282 | 8 | 78 | 2.23e-28 | 106 |
| MsG0880043755.01.T01 | MTR_8g040410 | 67.797 | 59 | 17 | 1 | 68 | 124 | 22 | 80 | 1.13e-19 | 83.6 |
| MsG0880043755.01.T01 | MTR_8g040410 | 82.609 | 46 | 7 | 1 | 229 | 273 | 82 | 127 | 4.98e-18 | 79.3 |
| MsG0880043755.01.T01 | MTR_8g066190 | 52.830 | 53 | 24 | 1 | 230 | 281 | 2 | 54 | 2.01e-11 | 59.7 |
| MsG0880043755.01.T01 | MTR_8g038710 | 57.407 | 54 | 22 | 1 | 135 | 187 | 11 | 64 | 2.93e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043755.01.T01 | AT5G07010 | 47.232 | 271 | 134 | 5 | 15 | 282 | 37 | 301 | 8.41e-90 | 271 |
| MsG0880043755.01.T01 | AT5G07000 | 47.529 | 263 | 128 | 5 | 25 | 282 | 32 | 289 | 1.02e-85 | 260 |
| MsG0880043755.01.T01 | AT3G45070 | 42.701 | 274 | 144 | 4 | 11 | 283 | 8 | 269 | 7.43e-74 | 229 |
| MsG0880043755.01.T01 | AT3G45070 | 42.701 | 274 | 144 | 4 | 11 | 283 | 13 | 274 | 7.49e-74 | 229 |
| MsG0880043755.01.T01 | AT3G45070 | 42.701 | 274 | 144 | 4 | 11 | 283 | 40 | 301 | 1.65e-73 | 229 |
| MsG0880043755.01.T01 | AT2G03770 | 42.636 | 258 | 135 | 4 | 26 | 282 | 22 | 267 | 1.38e-68 | 216 |
| MsG0880043755.01.T01 | AT1G18590 | 44.656 | 262 | 133 | 6 | 24 | 282 | 32 | 284 | 7.47e-68 | 214 |
| MsG0880043755.01.T01 | AT1G13420 | 43.191 | 257 | 138 | 4 | 28 | 283 | 28 | 277 | 6.37e-67 | 212 |
| MsG0880043755.01.T01 | AT3G45080 | 41.245 | 257 | 146 | 3 | 28 | 283 | 22 | 274 | 4.77e-65 | 207 |
| MsG0880043755.01.T01 | AT2G14920 | 41.473 | 258 | 148 | 3 | 28 | 283 | 24 | 280 | 3.49e-64 | 204 |
| MsG0880043755.01.T01 | AT5G43690 | 39.847 | 261 | 146 | 7 | 28 | 283 | 23 | 277 | 5.62e-63 | 201 |
| MsG0880043755.01.T01 | AT1G74100 | 41.603 | 262 | 139 | 8 | 25 | 282 | 25 | 276 | 3.71e-61 | 197 |
| MsG0880043755.01.T01 | AT1G28170 | 41.573 | 267 | 150 | 4 | 18 | 282 | 9 | 271 | 8.00e-61 | 196 |
| MsG0880043755.01.T01 | AT1G13430 | 40.684 | 263 | 135 | 4 | 28 | 272 | 28 | 287 | 3.57e-59 | 192 |
| MsG0880043755.01.T01 | AT2G03760 | 44.358 | 257 | 131 | 6 | 28 | 282 | 23 | 269 | 1.05e-58 | 190 |
| MsG0880043755.01.T01 | AT4G26280 | 37.452 | 259 | 137 | 4 | 28 | 283 | 19 | 255 | 9.46e-57 | 185 |
| MsG0880043755.01.T01 | AT2G03750 | 37.313 | 268 | 160 | 5 | 16 | 282 | 35 | 295 | 5.79e-55 | 181 |
| MsG0880043755.01.T01 | AT1G74090 | 42.529 | 261 | 138 | 6 | 25 | 282 | 37 | 288 | 4.09e-54 | 179 |
| MsG0880043755.01.T01 | AT2G27570 | 33.730 | 252 | 120 | 4 | 28 | 276 | 22 | 229 | 6.46e-44 | 150 |
Find 47 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAGGTCAATTTGAAAATT+TGG | 0.159871 | 8:-30125321 | None:intergenic |
| TAAAAGTTTAATTCAAAATA+AGG | 0.190833 | 8:-30125282 | None:intergenic |
| TTGATACATTTGTGTCATAT+TGG | 0.271726 | 8:+30125451 | MsG0880043755.01.T01:CDS |
| AACCATGTAGTGCCCCATTT+TGG | 0.277009 | 8:-30125165 | None:intergenic |
| TTGTAGCCTCCATGCCAAAA+TGG | 0.281020 | 8:+30125151 | MsG0880043755.01.T01:CDS |
| GCAAAATAATTTATATATAT+AGG | 0.292858 | 8:+30125421 | MsG0880043755.01.T01:CDS |
| TTCAAGAATAAAATCTTATT+AGG | 0.305417 | 8:-30125618 | None:intergenic |
| TTTCTTGTTCACCCCTTGAT+TGG | 0.315825 | 8:-30124942 | None:intergenic |
| ATGACACAAATGTATCAAAT+TGG | 0.339400 | 8:-30125446 | None:intergenic |
| TTGTCACTTCCTAAAGAAAA+TGG | 0.342211 | 8:+30125018 | MsG0880043755.01.T01:CDS |
| ACTCAAGAAGAGGAAAATAA+TGG | 0.377886 | 8:+30125708 | MsG0880043755.01.T01:CDS |
| AAAAGTTTAATTCAAAATAA+GGG | 0.394335 | 8:-30125281 | None:intergenic |
| CAAAAGAATTGCAGAGTTTG+TGG | 0.398800 | 8:+30125674 | MsG0880043755.01.T01:CDS |
| TTTGAAAAGAGTTTATTGAT+TGG | 0.400016 | 8:-30125098 | None:intergenic |
| TGTTAAAATTAACATCTTTG+AGG | 0.400392 | 8:-30125650 | None:intergenic |
| ATTGATTGGATGAGAGTTGA+TGG | 0.406498 | 8:-30125084 | None:intergenic |
| TTGGTTCAATCATGTTTGAT+AGG | 0.413833 | 8:-30125338 | None:intergenic |
| TGTAGCCTCCATGCCAAAAT+GGG | 0.428888 | 8:+30125152 | MsG0880043755.01.T01:CDS |
| TAAGTGCGTATGGACCGTTT+TGG | 0.444155 | 8:+30125556 | MsG0880043755.01.T01:CDS |
| GGTTAACAATGGCATATGTA+AGG | 0.461890 | 8:-30125194 | None:intergenic |
| AAAAGAATTGCAGAGTTTGT+GGG | 0.464930 | 8:+30125675 | MsG0880043755.01.T01:CDS |
| ACACATTCCATTCTCTTCGT+TGG | 0.466230 | 8:+30125374 | MsG0880043755.01.T01:CDS |
| TCATATGTTGGGTTGCTTGA+AGG | 0.474585 | 8:+30125581 | MsG0880043755.01.T01:CDS |
| CAAAGGAGGGAAAATGTTTG+CGG | 0.484909 | 8:-30125215 | None:intergenic |
| ATTTCATCTATGGTTAACAT+AGG | 0.493382 | 8:-30125510 | None:intergenic |
| TGCAGCTTTGAGAGTATGAA+TGG | 0.495135 | 8:+30125756 | MsG0880043755.01.T01:CDS |
| AATTAATGAAGAAGATAAGC+TGG | 0.503949 | 8:+30124966 | MsG0880043755.01.T01:CDS |
| ATATGAATGGAAACCAATCA+AGG | 0.508078 | 8:+30124929 | None:intergenic |
| CACACATATGATGATATGAA+TGG | 0.514461 | 8:+30124916 | None:intergenic |
| GACTTAGCCAACGAAGAGAA+TGG | 0.521939 | 8:-30125381 | None:intergenic |
| TGCCAAAATGGGGCACTACA+TGG | 0.533557 | 8:+30125163 | MsG0880043755.01.T01:CDS |
| ATTTCCTTTCACTCAAGAAG+AGG | 0.550723 | 8:+30125698 | MsG0880043755.01.T01:CDS |
| TGTAATGGGATAAGTGCGTA+TGG | 0.562143 | 8:+30125546 | MsG0880043755.01.T01:CDS |
| AAAATGTTTGCGGTTAACAA+TGG | 0.564835 | 8:-30125205 | None:intergenic |
| AGAAGAGGAAAATAATGGAA+TGG | 0.576707 | 8:+30125713 | MsG0880043755.01.T01:CDS |
| GGATGGTCATTCTCAAAGGA+GGG | 0.580828 | 8:-30125228 | None:intergenic |
| GTTAACAATGGCATATGTAA+GGG | 0.583627 | 8:-30125193 | None:intergenic |
| CCCAACATATGATCCCAAAA+CGG | 0.591413 | 8:-30125570 | None:intergenic |
| TAATGGATGGTCATTCTCAA+AGG | 0.594736 | 8:-30125232 | None:intergenic |
| TATGAATGGAAACCAATCAA+GGG | 0.595765 | 8:+30124930 | None:intergenic |
| TGGATGGTCATTCTCAAAGG+AGG | 0.596431 | 8:-30125229 | None:intergenic |
| AAATAAGGGACTAATTCGTG+TGG | 0.604696 | 8:-30125267 | None:intergenic |
| TGTGGATTGAATGCAAGTAA+TGG | 0.622386 | 8:-30125249 | None:intergenic |
| ATGAATGGAAACCAATCAAG+GGG | 0.638662 | 8:+30124931 | MsG0880043755.01.T01:CDS |
| GTAGCCTCCATGCCAAAATG+GGG | 0.673239 | 8:+30125153 | MsG0880043755.01.T01:CDS |
| TATCAAACATGATTGAACCA+AGG | 0.678125 | 8:+30125340 | MsG0880043755.01.T01:CDS |
| GATTGAATGCAAGTAATGGA+TGG | 0.685646 | 8:-30125245 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTTTAATTCAAAATAA+GGG | - | Chr8:30125284-30125303 | None:intergenic | 10.0% |
| !! | ATGATAAAAATACAAATATT+GGG | - | Chr8:30125052-30125071 | None:intergenic | 10.0% |
| !! | GCAAAATAATTTATATATAT+AGG | + | Chr8:30125421-30125440 | MsG0880043755.01.T01:CDS | 10.0% |
| !! | TAAAAGTTTAATTCAAAATA+AGG | - | Chr8:30125285-30125304 | None:intergenic | 10.0% |
| !!! | TATATAAATTATTTTGCAAT+TGG | - | Chr8:30125418-30125437 | None:intergenic | 10.0% |
| !!! | TATTTTGAATTAAACTTTTA+TGG | + | Chr8:30125285-30125304 | MsG0880043755.01.T01:CDS | 10.0% |
| !! | CATGATAAAAATACAAATAT+TGG | - | Chr8:30125053-30125072 | None:intergenic | 15.0% |
| !! | TTCAAGAATAAAATCTTATT+AGG | - | Chr8:30125621-30125640 | None:intergenic | 15.0% |
| !!! | ATTTTTGAAAAATACTGTAA+TGG | + | Chr8:30125531-30125550 | MsG0880043755.01.T01:CDS | 15.0% |
| !!! | CAATATTTGTATTTTTATCA+TGG | + | Chr8:30125051-30125070 | MsG0880043755.01.T01:CDS | 15.0% |
| !!! | TTTTTCAAAAATTTCATCTA+TGG | - | Chr8:30125523-30125542 | None:intergenic | 15.0% |
| !!! | TTTTTGAAAAATACTGTAAT+GGG | + | Chr8:30125532-30125551 | MsG0880043755.01.T01:CDS | 15.0% |
| !! | AAAAATACAAATATTGGGTT+AGG | - | Chr8:30125047-30125066 | None:intergenic | 20.0% |
| !! | TGTTAAAATTAACATCTTTG+AGG | - | Chr8:30125653-30125672 | None:intergenic | 20.0% |
| !! | TTTGAAAAGAGTTTATTGAT+TGG | - | Chr8:30125101-30125120 | None:intergenic | 20.0% |
| !!! | TGTATTTTTATCATGGATTT+TGG | + | Chr8:30125058-30125077 | MsG0880043755.01.T01:CDS | 20.0% |
| ! | AATTAATGAAGAAGATAAGC+TGG | + | Chr8:30124966-30124985 | MsG0880043755.01.T01:CDS | 25.0% |
| ! | ATGACACAAATGTATCAAAT+TGG | - | Chr8:30125449-30125468 | None:intergenic | 25.0% |
| ! | ATTTCATCTATGGTTAACAT+AGG | - | Chr8:30125513-30125532 | None:intergenic | 25.0% |
| ! | GATAGGTCAATTTGAAAATT+TGG | - | Chr8:30125324-30125343 | None:intergenic | 25.0% |
| ! | TTGATACATTTGTGTCATAT+TGG | + | Chr8:30125451-30125470 | MsG0880043755.01.T01:CDS | 25.0% |
| AAAAGAATTGCAGAGTTTGT+GGG | + | Chr8:30125675-30125694 | MsG0880043755.01.T01:CDS | 30.0% | |
| AAAATGTTTGCGGTTAACAA+TGG | - | Chr8:30125208-30125227 | None:intergenic | 30.0% | |
| ACTCAAGAAGAGGAAAATAA+TGG | + | Chr8:30125708-30125727 | MsG0880043755.01.T01:CDS | 30.0% | |
| GTTAACAATGGCATATGTAA+GGG | - | Chr8:30125196-30125215 | None:intergenic | 30.0% | |
| TATCAAACATGATTGAACCA+AGG | + | Chr8:30125340-30125359 | MsG0880043755.01.T01:CDS | 30.0% | |
| TTGGTTCAATCATGTTTGAT+AGG | - | Chr8:30125341-30125360 | None:intergenic | 30.0% | |
| ! | AACTTTTATGGTGATAGAGA+TGG | + | Chr8:30125297-30125316 | MsG0880043755.01.T01:CDS | 30.0% |
| ! | AGAAGAGGAAAATAATGGAA+TGG | + | Chr8:30125713-30125732 | MsG0880043755.01.T01:CDS | 30.0% |
| ! | TTGTCACTTCCTAAAGAAAA+TGG | + | Chr8:30125018-30125037 | MsG0880043755.01.T01:CDS | 30.0% |
| AAATAAGGGACTAATTCGTG+TGG | - | Chr8:30125270-30125289 | None:intergenic | 35.0% | |
| ATGAATGGAAACCAATCAAG+GGG | + | Chr8:30124931-30124950 | MsG0880043755.01.T01:CDS | 35.0% | |
| ATGTGTGTTACAAAAAGCCT+TGG | - | Chr8:30125360-30125379 | None:intergenic | 35.0% | |
| ATTGATTGGATGAGAGTTGA+TGG | - | Chr8:30125087-30125106 | None:intergenic | 35.0% | |
| ATTTCCTTTCACTCAAGAAG+AGG | + | Chr8:30125698-30125717 | MsG0880043755.01.T01:CDS | 35.0% | |
| CAAAAGAATTGCAGAGTTTG+TGG | + | Chr8:30125674-30125693 | MsG0880043755.01.T01:CDS | 35.0% | |
| GGTTAACAATGGCATATGTA+AGG | - | Chr8:30125197-30125216 | None:intergenic | 35.0% | |
| ! | GATTGAATGCAAGTAATGGA+TGG | - | Chr8:30125248-30125267 | None:intergenic | 35.0% |
| ! | GTTAGGTGACCATTTTCTTT+AGG | - | Chr8:30125030-30125049 | None:intergenic | 35.0% |
| ! | TAATGGATGGTCATTCTCAA+AGG | - | Chr8:30125235-30125254 | None:intergenic | 35.0% |
| ! | TGTGGATTGAATGCAAGTAA+TGG | - | Chr8:30125252-30125271 | None:intergenic | 35.0% |
| ! | TTTTCCTCTTCTTGAGTGAA+AGG | - | Chr8:30125705-30125724 | None:intergenic | 35.0% |
| ACACATTCCATTCTCTTCGT+TGG | + | Chr8:30125374-30125393 | MsG0880043755.01.T01:CDS | 40.0% | |
| CAAAGGAGGGAAAATGTTTG+CGG | - | Chr8:30125218-30125237 | None:intergenic | 40.0% | |
| CCCAACATATGATCCCAAAA+CGG | - | Chr8:30125573-30125592 | None:intergenic | 40.0% | |
| TTTCTTGTTCACCCCTTGAT+TGG | - | Chr8:30124945-30124964 | None:intergenic | 40.0% | |
| ! | TCATATGTTGGGTTGCTTGA+AGG | + | Chr8:30125581-30125600 | MsG0880043755.01.T01:CDS | 40.0% |
| ! | TGTAATGGGATAAGTGCGTA+TGG | + | Chr8:30125546-30125565 | MsG0880043755.01.T01:CDS | 40.0% |
| !! | TGCAGCTTTGAGAGTATGAA+TGG | + | Chr8:30125756-30125775 | MsG0880043755.01.T01:CDS | 40.0% |
| !!! | ACCGTTTTGGGATCATATGT+TGG | + | Chr8:30125569-30125588 | MsG0880043755.01.T01:CDS | 40.0% |
| !!! | CCGTTTTGGGATCATATGTT+GGG | + | Chr8:30125570-30125589 | MsG0880043755.01.T01:CDS | 40.0% |
| GACTTAGCCAACGAAGAGAA+TGG | - | Chr8:30125384-30125403 | None:intergenic | 45.0% | |
| GGATGGTCATTCTCAAAGGA+GGG | - | Chr8:30125231-30125250 | None:intergenic | 45.0% | |
| TGGATGGTCATTCTCAAAGG+AGG | - | Chr8:30125232-30125251 | None:intergenic | 45.0% | |
| TGTAGCCTCCATGCCAAAAT+GGG | + | Chr8:30125152-30125171 | MsG0880043755.01.T01:CDS | 45.0% | |
| TTGTAGCCTCCATGCCAAAA+TGG | + | Chr8:30125151-30125170 | MsG0880043755.01.T01:CDS | 45.0% | |
| ! | AACCATGTAGTGCCCCATTT+TGG | - | Chr8:30125168-30125187 | None:intergenic | 45.0% |
| ! | AAGTGCGTATGGACCGTTTT+GGG | + | Chr8:30125557-30125576 | MsG0880043755.01.T01:CDS | 45.0% |
| ! | TAAGTGCGTATGGACCGTTT+TGG | + | Chr8:30125556-30125575 | MsG0880043755.01.T01:CDS | 45.0% |
| GTAGCCTCCATGCCAAAATG+GGG | + | Chr8:30125153-30125172 | MsG0880043755.01.T01:CDS | 50.0% | |
| ! | TGCCAAAATGGGGCACTACA+TGG | + | Chr8:30125163-30125182 | MsG0880043755.01.T01:CDS | 50.0% |
| !! | TGTAGTGCCCCATTTTGGCA+TGG | - | Chr8:30125163-30125182 | None:intergenic | 50.0% |
| !! | AGTGCCCCATTTTGGCATGG+AGG | - | Chr8:30125160-30125179 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 30124931 | 30125782 | 30124931 | ID=MsG0880043755.01;Name=MsG0880043755.01 |
| Chr8 | mRNA | 30124931 | 30125782 | 30124931 | ID=MsG0880043755.01.T01;Parent=MsG0880043755.01;Name=MsG0880043755.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|283 |
| Chr8 | exon | 30124931 | 30125782 | 30124931 | ID=MsG0880043755.01.T01:exon:7153;Parent=MsG0880043755.01.T01 |
| Chr8 | CDS | 30124931 | 30125782 | 30124931 | ID=MsG0880043755.01.T01:cds;Parent=MsG0880043755.01.T01 |
| Gene Sequence |
| Protein sequence |
