Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044769.01.T01 | XP_013445739.1 | 98.592 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 0 | 1021 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044769.01.T01 | Q8L736 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044769.01.T01 | A0A072U1V1 | 98.592 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1021 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044769.01 | MsG0880045819.01 | 0.800858 | 1.182945e-48 | 5.567406e-46 |
| MsG0880044769.01 | MsG0880046226.01 | 0.802473 | 5.517508e-49 | 2.705154e-46 |
| MsG0180003428.01 | MsG0880044769.01 | 0.811956 | 5.402332e-51 | 3.390268e-48 |
| MsG0180004752.01 | MsG0880044769.01 | 0.807045 | 6.123119e-50 | 3.375770e-47 |
| MsG0180006047.01 | MsG0880044769.01 | 0.800831 | 1.198482e-48 | 5.636329e-46 |
| MsG0480019295.01 | MsG0880044769.01 | 0.806238 | 9.066034e-50 | 4.895903e-47 |
| MsG0480019395.01 | MsG0880044769.01 | 0.800410 | 1.460204e-48 | 6.794456e-46 |
| MsG0480020411.01 | MsG0880044769.01 | 0.824167 | 9.345627e-54 | 8.214351e-51 |
| MsG0480021298.01 | MsG0880044769.01 | 0.810301 | 1.234104e-50 | 7.411684e-48 |
| MsG0480022319.01 | MsG0880044769.01 | 0.822128 | 2.794967e-53 | 2.318816e-50 |
| MsG0480022860.01 | MsG0880044769.01 | 0.820410 | 6.960293e-53 | 5.503339e-50 |
| MsG0480023733.01 | MsG0880044769.01 | 0.814900 | 1.217187e-51 | 8.269312e-49 |
| MsG0580025440.01 | MsG0880044769.01 | 0.813262 | 2.798502e-51 | 1.818676e-48 |
| MsG0380017550.01 | MsG0880044769.01 | 0.832728 | 8.010144e-56 | 9.031186e-53 |
| MsG0580026085.01 | MsG0880044769.01 | 0.869577 | 2.790038e-66 | 1.052309e-62 |
| MsG0580026095.01 | MsG0880044769.01 | 0.828595 | 8.236348e-55 | 8.224063e-52 |
| MsG0580027733.01 | MsG0880044769.01 | 0.812610 | 3.887511e-51 | 2.482982e-48 |
| MsG0580028999.01 | MsG0880044769.01 | 0.825711 | 4.038537e-54 | 3.709791e-51 |
| MsG0580030086.01 | MsG0880044769.01 | 0.813422 | 2.580997e-51 | 1.684763e-48 |
| MsG0280010272.01 | MsG0880044769.01 | 0.815063 | 1.120238e-51 | 7.644300e-49 |
| MsG0780037599.01 | MsG0880044769.01 | 0.800216 | 1.599178e-48 | 7.404390e-46 |
| MsG0780039877.01 | MsG0880044769.01 | 0.827810 | 1.273863e-54 | 1.243074e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880044769.01 | MsG0580026085.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044769.01.T01 | MTR_8g468030 | 98.592 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1021 |
| MsG0880044769.01.T01 | MTR_5g039390 | 73.137 | 510 | 90 | 7 | 1 | 497 | 1 | 476 | 0.0 | 744 |
| MsG0880044769.01.T01 | MTR_4g108280 | 62.803 | 371 | 135 | 2 | 130 | 497 | 10 | 380 | 5.77e-175 | 497 |
| MsG0880044769.01.T01 | MTR_0345s0010 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 6.02e-164 | 471 |
| MsG0880044769.01.T01 | MTR_0105s0170 | 62.323 | 353 | 132 | 1 | 145 | 497 | 97 | 448 | 4.38e-163 | 469 |
| MsG0880044769.01.T01 | MTR_0105s0130 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 6.48e-163 | 468 |
| MsG0880044769.01.T01 | MTR_0105s0040 | 62.323 | 353 | 132 | 1 | 145 | 497 | 182 | 533 | 2.91e-162 | 470 |
| MsG0880044769.01.T01 | MTR_0105s0020 | 61.473 | 353 | 135 | 1 | 145 | 497 | 84 | 435 | 3.78e-162 | 466 |
| MsG0880044769.01.T01 | MTR_4g022260 | 61.944 | 360 | 136 | 1 | 138 | 497 | 59 | 417 | 4.27e-162 | 466 |
| MsG0880044769.01.T01 | MTR_0496s0010 | 60.833 | 360 | 134 | 2 | 138 | 497 | 59 | 411 | 1.75e-160 | 461 |
| MsG0880044769.01.T01 | MTR_1330s0010 | 61.960 | 347 | 131 | 1 | 145 | 491 | 97 | 442 | 8.02e-159 | 458 |
| MsG0880044769.01.T01 | MTR_4g022400 | 60.169 | 354 | 140 | 1 | 144 | 497 | 62 | 414 | 4.34e-154 | 445 |
| MsG0880044769.01.T01 | MTR_2g094093 | 51.130 | 354 | 160 | 4 | 149 | 497 | 19 | 364 | 5.79e-117 | 348 |
| MsG0880044769.01.T01 | MTR_7g029290 | 36.031 | 383 | 217 | 10 | 122 | 495 | 38 | 401 | 6.65e-67 | 221 |
| MsG0880044769.01.T01 | MTR_6g023805 | 37.466 | 363 | 193 | 8 | 151 | 495 | 57 | 403 | 6.27e-64 | 213 |
| MsG0880044769.01.T01 | MTR_0105s0060 | 62.637 | 91 | 34 | 0 | 407 | 497 | 15 | 105 | 1.55e-36 | 130 |
| MsG0880044769.01.T01 | MTR_3g085570 | 27.306 | 271 | 168 | 8 | 124 | 373 | 5 | 267 | 2.22e-21 | 96.3 |
| MsG0880044769.01.T01 | MTR_8g080370 | 26.531 | 245 | 155 | 6 | 146 | 373 | 47 | 283 | 3.15e-16 | 80.9 |
| MsG0880044769.01.T01 | MTR_4g114110 | 25.649 | 308 | 200 | 10 | 126 | 422 | 58 | 347 | 4.85e-16 | 80.9 |
| MsG0880044769.01.T01 | MTR_3g073640 | 24.642 | 349 | 187 | 12 | 150 | 429 | 43 | 384 | 5.73e-16 | 80.9 |
| MsG0880044769.01.T01 | MTR_8g085600 | 26.056 | 284 | 182 | 9 | 150 | 422 | 77 | 343 | 1.23e-15 | 79.3 |
| MsG0880044769.01.T01 | MTR_4g011900 | 22.255 | 337 | 220 | 7 | 150 | 460 | 5 | 325 | 1.27e-14 | 75.9 |
| MsG0880044769.01.T01 | MTR_2g008440 | 24.438 | 356 | 190 | 11 | 146 | 429 | 39 | 387 | 1.31e-14 | 76.6 |
| MsG0880044769.01.T01 | MTR_7g095220 | 21.605 | 324 | 207 | 7 | 148 | 454 | 2 | 295 | 1.34e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044769.01.T01 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 553 |
| MsG0880044769.01.T01 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 553 |
| MsG0880044769.01.T01 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 553 |
| MsG0880044769.01.T01 | AT1G14330 | 69.841 | 378 | 108 | 3 | 123 | 497 | 67 | 441 | 0.0 | 541 |
| MsG0880044769.01.T01 | AT1G26930 | 67.935 | 368 | 115 | 1 | 133 | 497 | 54 | 421 | 0.0 | 525 |
| MsG0880044769.01.T01 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 8.47e-169 | 484 |
| MsG0880044769.01.T01 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 8.47e-169 | 484 |
| MsG0880044769.01.T01 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 8.47e-169 | 484 |
| MsG0880044769.01.T01 | AT1G26930 | 57.609 | 368 | 101 | 2 | 133 | 497 | 54 | 369 | 6.98e-147 | 425 |
| MsG0880044769.01.T01 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.85e-109 | 330 |
| MsG0880044769.01.T01 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.85e-109 | 330 |
| MsG0880044769.01.T01 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.85e-109 | 330 |
| MsG0880044769.01.T01 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.14e-63 | 213 |
| MsG0880044769.01.T01 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.14e-63 | 213 |
| MsG0880044769.01.T01 | AT5G40680 | 33.611 | 360 | 222 | 6 | 146 | 495 | 61 | 413 | 3.02e-59 | 201 |
| MsG0880044769.01.T01 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.35e-22 | 98.6 |
| MsG0880044769.01.T01 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.35e-22 | 98.6 |
| MsG0880044769.01.T01 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.30e-20 | 94.0 |
| MsG0880044769.01.T01 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.30e-20 | 94.0 |
| MsG0880044769.01.T01 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.30e-20 | 94.0 |
| MsG0880044769.01.T01 | AT1G15670 | 25.937 | 347 | 208 | 13 | 150 | 466 | 3 | 330 | 2.27e-17 | 84.0 |
| MsG0880044769.01.T01 | AT1G55270 | 25.352 | 284 | 184 | 10 | 150 | 422 | 78 | 344 | 1.09e-15 | 79.7 |
| MsG0880044769.01.T01 | AT1G80440 | 24.924 | 329 | 211 | 11 | 150 | 457 | 3 | 316 | 9.41e-14 | 73.2 |
| MsG0880044769.01.T01 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 2 | 214 | 2.72e-13 | 71.6 |
| MsG0880044769.01.T01 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 3.34e-13 | 71.2 |
| MsG0880044769.01.T01 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 3.34e-13 | 71.2 |
Find 142 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATTCATGCCGGATT+TGG | 0.208968 | 8:+48875953 | MsG0880044769.01.T01:CDS |
| GGAGATAGGCTTATTGTTAT+TGG | 0.237398 | 8:+48877208 | MsG0880044769.01.T01:CDS |
| TTCCTGGGCTTGATCATGTT+TGG | 0.245172 | 8:-48876839 | None:intergenic |
| ACGGTTGGGGTCTTGCATTT+AGG | 0.270827 | 8:+48877179 | MsG0880044769.01.T01:CDS |
| TCCTGGGCTTGATCATGTTT+GGG | 0.274266 | 8:-48876838 | None:intergenic |
| CGGTTGGGGTCTTGCATTTA+GGG | 0.286736 | 8:+48877180 | MsG0880044769.01.T01:CDS |
| TGCATCCACCGTTCGCGAAT+TGG | 0.289308 | 8:-48876524 | None:intergenic |
| TTGACAAACTCGTGGGAATC+TGG | 0.303822 | 8:+48876671 | MsG0880044769.01.T01:CDS |
| GGTACCGAACTTCTTGTGTT+TGG | 0.310632 | 8:+48876608 | MsG0880044769.01.T01:CDS |
| CATTCGTTAGAAGCCATTCT+AGG | 0.314758 | 8:-48876551 | None:intergenic |
| TACCCCAGAGCACATCTTCC+TGG | 0.332847 | 8:-48876855 | None:intergenic |
| CATTTAGGGCATGTGGAGAT+AGG | 0.347335 | 8:+48877194 | MsG0880044769.01.T01:CDS |
| GTACCGAACTTCTTGTGTTT+GGG | 0.354894 | 8:+48876609 | MsG0880044769.01.T01:CDS |
| CGATGTTCAAGGTCTGATTA+TGG | 0.355945 | 8:+48876365 | MsG0880044769.01.T01:CDS |
| CGCAGCCGAGGAAGGTTAAC+AGG | 0.363634 | 8:+48876018 | MsG0880044769.01.T01:CDS |
| TGCCTCTGCCTGACAAGAAC+TGG | 0.372108 | 8:-48875913 | None:intergenic |
| CCGTTCGCGAATTGGATCAT+AGG | 0.379832 | 8:-48876516 | None:intergenic |
| TGTTTCCCATGTTTGATTCT+CGG | 0.387447 | 8:-48876813 | None:intergenic |
| CCTGTCTAAGCCGATGTTCA+AGG | 0.410507 | 8:+48876354 | MsG0880044769.01.T01:CDS |
| GATGTGCTCTGGGGTATTCA+TGG | 0.419067 | 8:+48876862 | MsG0880044769.01.T01:CDS |
| TGTCACCCGGGCGTAGTGCT+AGG | 0.424613 | 8:+48876993 | MsG0880044769.01.T01:CDS |
| CTACGCCCGGGTGACATGTT+AGG | 0.424620 | 8:-48876986 | None:intergenic |
| GCTTACAATTGGTAGATTAC+CGG | 0.426080 | 8:+48877138 | MsG0880044769.01.T01:CDS |
| AATCTCCTGTTAACCTTCCT+CGG | 0.429428 | 8:-48876023 | None:intergenic |
| TGTTGTTCCGCAAATCGATC+TGG | 0.429697 | 8:+48876076 | MsG0880044769.01.T01:CDS |
| CTGAAGAAGCAGCTTGATGA+TGG | 0.430503 | 8:+48876218 | MsG0880044769.01.T01:CDS |
| AGGCAGAGGCAGAGAACAAT+TGG | 0.435851 | 8:+48875925 | MsG0880044769.01.T01:CDS |
| GTGGATGCATTTACCTAGAA+TGG | 0.438443 | 8:+48876538 | MsG0880044769.01.T01:CDS |
| TTTCGTGTGCCCTCCTCGAA+TGG | 0.440135 | 8:+48876489 | MsG0880044769.01.T01:CDS |
| GCAATTATAAACAAAGTTAC+CGG | 0.440298 | 8:-48877326 | None:intergenic |
| AGCAGCTTCGATGAACGGTT+GGG | 0.443209 | 8:+48877165 | MsG0880044769.01.T01:CDS |
| GGTGGTGCCTCGGCTGTGGC+AGG | 0.444795 | 8:-48877028 | None:intergenic |
| TTCGTGTGCCCTCCTCGAAT+GGG | 0.453967 | 8:+48876490 | MsG0880044769.01.T01:CDS |
| AAGCCCAGGAAGATGTGCTC+TGG | 0.455338 | 8:+48876851 | MsG0880044769.01.T01:CDS |
| ACACTTTGGCAATCATTCAA+TGG | 0.458613 | 8:-48876125 | None:intergenic |
| AACAAAGTGTGGCTTACAAT+TGG | 0.460894 | 8:+48877127 | MsG0880044769.01.T01:CDS |
| GTCACCCGGGCGTAGTGCTA+GGG | 0.467230 | 8:+48876994 | MsG0880044769.01.T01:CDS |
| AGAGCTTCCGCAACATAATC+CGG | 0.467928 | 8:+48876408 | MsG0880044769.01.T01:CDS |
| TTCCAGTTCTTGTCAGGCAG+AGG | 0.467981 | 8:+48875911 | MsG0880044769.01.T01:CDS |
| TGTTTATAATTGCGCCGTGA+TGG | 0.469236 | 8:+48877336 | MsG0880044769.01.T01:CDS |
| GTTGGAAGGTCGTTCCTGCT+TGG | 0.471319 | 8:+48875875 | MsG0880044769.01.T01:CDS |
| GCAGAACCAAACAAGCATCT+TGG | 0.482493 | 8:-48876710 | None:intergenic |
| AGATTGGAATCTTGTTATCA+AGG | 0.484042 | 8:+48876041 | MsG0880044769.01.T01:CDS |
| AAACCCTCGCCATGACTCCT+TGG | 0.487015 | 8:-48877235 | None:intergenic |
| GAGGAAGGTTAACAGGAGAT+TGG | 0.488758 | 8:+48876025 | MsG0880044769.01.T01:CDS |
| GAACAGAAGCAGCATCATGC+AGG | 0.492940 | 8:+48876275 | MsG0880044769.01.T01:CDS |
| GTTTATAATTGCGCCGTGAT+GGG | 0.493022 | 8:+48877337 | MsG0880044769.01.T01:CDS |
| CTCGCCGCACGTAAGAAGCT+TGG | 0.497088 | 8:-48876927 | None:intergenic |
| TAGAGGTGGTGCCTCGGCTG+TGG | 0.497106 | 8:-48877032 | None:intergenic |
| AACGATAGAGCTCACCGCTC+CGG | 0.501276 | 8:-48876427 | None:intergenic |
| GTCGTTCCTGCTTGGTTCCG+AGG | 0.503606 | 8:+48875883 | MsG0880044769.01.T01:CDS |
| TGCTGCTTCTGTTCATCCGT+CGG | 0.504235 | 8:-48876266 | None:intergenic |
| GAGCAGCTTCGATGAACGGT+TGG | 0.506989 | 8:+48877164 | MsG0880044769.01.T01:CDS |
| TTCATCGAAGCTGCTCTCTC+CGG | 0.508226 | 8:-48877157 | None:intergenic |
| AGCCCAGGAAGATGTGCTCT+GGG | 0.511106 | 8:+48876852 | MsG0880044769.01.T01:CDS |
| CTGTTAACCTTCCTCGGCTG+CGG | 0.511143 | 8:-48876017 | None:intergenic |
| GATAGGCTTATTGTTATTGG+CGG | 0.511196 | 8:+48877211 | MsG0880044769.01.T01:CDS |
| GGTCTTGCATTTAGGGCATG+TGG | 0.511219 | 8:+48877187 | MsG0880044769.01.T01:CDS |
| GTCTTTCATGAAATTCATGC+CGG | 0.514207 | 8:+48875947 | MsG0880044769.01.T01:CDS |
| CGATCCCCTAGCACTACGCC+CGG | 0.523209 | 8:-48876999 | None:intergenic |
| ATGCTTCATGTGTTCAGATA+AGG | 0.523900 | 8:+48876571 | MsG0880044769.01.T01:CDS |
| CCGAACTTCTTGTGTTTGGG+AGG | 0.526756 | 8:+48876612 | MsG0880044769.01.T01:CDS |
| CATTGTGGAGGTCCTTCACT+AGG | 0.527917 | 8:-48877280 | None:intergenic |
| GACTGTATCTGTATATAACA+TGG | 0.528568 | 8:-48876646 | None:intergenic |
| AGAGAGATTGCAATTCTAGC+TGG | 0.531625 | 8:+48876740 | MsG0880044769.01.T01:CDS |
| GATCATAGGCCTCCCATTCG+AGG | 0.531967 | 8:-48876502 | None:intergenic |
| CGCCGCTGATTATGCTGACA+TGG | 0.534149 | 8:+48877081 | MsG0880044769.01.T01:CDS |
| ACCCCAGAGCACATCTTCCT+GGG | 0.535814 | 8:-48876854 | None:intergenic |
| CCTCCCAAACACAAGAAGTT+CGG | 0.539106 | 8:-48876612 | None:intergenic |
| CGGGCGTAGTGCTAGGGGAT+CGG | 0.539496 | 8:+48877000 | MsG0880044769.01.T01:CDS |
| TTCATCCGTCGGCTCGTCAG+TGG | 0.539654 | 8:-48876255 | None:intergenic |
| CCTTGAACATCGGCTTAGAC+AGG | 0.541539 | 8:-48876354 | None:intergenic |
| CTACTTGCTAGAAAACAATC+CGG | 0.542893 | 8:+48877307 | MsG0880044769.01.T01:CDS |
| TCATCATCCAGATCGATTTG+CGG | 0.545355 | 8:-48876083 | None:intergenic |
| ATCTTGTTATCAAGGTGAGA+TGG | 0.548591 | 8:+48876049 | MsG0880044769.01.T01:CDS |
| TATCGTTGGCGGAGACTGAA+CGG | 0.553625 | 8:+48876443 | MsG0880044769.01.T01:CDS |
| GCAGCTTCGATGAACGGTTG+GGG | 0.555988 | 8:+48877166 | MsG0880044769.01.T01:CDS |
| AGCTACTAGAGGTGGTGCCT+CGG | 0.556190 | 8:-48877038 | None:intergenic |
| GATAAGGAGTCTTTAGCGGT+AGG | 0.560609 | 8:+48876587 | MsG0880044769.01.T01:CDS |
| CGAACTTCTTGTGTTTGGGA+GGG | 0.560794 | 8:+48876613 | MsG0880044769.01.T01:CDS |
| TTCAGATAAGGAGTCTTTAG+CGG | 0.567602 | 8:+48876583 | MsG0880044769.01.T01:CDS |
| TATAGAGCTCAGCCGAGTCA+AGG | 0.569597 | 8:-48876787 | None:intergenic |
| TAATTCCACTGACGAGCCGA+CGG | 0.571828 | 8:+48876250 | MsG0880044769.01.T01:CDS |
| TGCTCTGGGGTATTCATGGA+CGG | 0.572915 | 8:+48876866 | MsG0880044769.01.T01:CDS |
| GCTGGTGGTTGTGATTCAGA+TGG | 0.575080 | 8:+48876758 | MsG0880044769.01.T01:CDS |
| GGAGATGCCTGCCACAGCCG+AGG | 0.577171 | 8:+48877021 | MsG0880044769.01.T01:CDS |
| ATGATCCAATTCGCGAACGG+TGG | 0.578353 | 8:+48876519 | MsG0880044769.01.T01:CDS |
| AACAGAAGCAGCATCATGCA+GGG | 0.580432 | 8:+48876276 | MsG0880044769.01.T01:CDS |
| AAACAACCTCGGAACCAAGC+AGG | 0.584981 | 8:-48875889 | None:intergenic |
| GAGATTGCAATTCTAGCTGG+TGG | 0.586483 | 8:+48876743 | MsG0880044769.01.T01:CDS |
| ATGAAGATGAACCGCAGCCG+AGG | 0.586920 | 8:+48876006 | MsG0880044769.01.T01:CDS |
| ATTGGCGGACCAAGGAGTCA+TGG | 0.588019 | 8:+48877226 | MsG0880044769.01.T01:CDS |
| GTGTGCCCTCCTCGAATGGG+AGG | 0.588964 | 8:+48876493 | MsG0880044769.01.T01:CDS |
| GAAATTCCTAACATGTCACC+CGG | 0.589237 | 8:+48876980 | MsG0880044769.01.T01:CDS |
| GAGAGAGCAGCTTCGATGAA+CGG | 0.590084 | 8:+48877160 | MsG0880044769.01.T01:CDS |
| GCGGTGAGCTCTATCGTTGG+CGG | 0.596893 | 8:+48876432 | MsG0880044769.01.T01:CDS |
| ACGATAAAGGTAACAAAGTG+TGG | 0.600614 | 8:+48877116 | MsG0880044769.01.T01:CDS |
| CAAGCTTCTTACGTGCGGCG+AGG | 0.604569 | 8:+48876928 | MsG0880044769.01.T01:CDS |
| CATAATCAGACCTTGAACAT+CGG | 0.607165 | 8:-48876364 | None:intergenic |
| TCCCAAACATGATCAAGCCC+AGG | 0.608139 | 8:+48876837 | MsG0880044769.01.T01:CDS |
| AGATGAACCGCAGCCGAGGA+AGG | 0.608999 | 8:+48876010 | MsG0880044769.01.T01:CDS |
| CTGGTGGTTGTGATTCAGAT+GGG | 0.609342 | 8:+48876759 | MsG0880044769.01.T01:CDS |
| TCACCCGGGCGTAGTGCTAG+GGG | 0.612909 | 8:+48876995 | MsG0880044769.01.T01:CDS |
| CACCGCTCCGGATTATGTTG+CGG | 0.613767 | 8:-48876415 | None:intergenic |
| ACTCGTGGGAATCTGGAATG+AGG | 0.616994 | 8:+48876678 | MsG0880044769.01.T01:CDS |
| AGATGGGCATATCCTTGACT+CGG | 0.619344 | 8:+48876775 | MsG0880044769.01.T01:CDS |
| TGAAGAAGCAGCTTGATGAT+GGG | 0.619716 | 8:+48876219 | MsG0880044769.01.T01:CDS |
| GGACCAAGGAGTCATGGCGA+GGG | 0.620296 | 8:+48877232 | MsG0880044769.01.T01:CDS |
| TTATTTACAACAGCTACTAG+AGG | 0.621989 | 8:-48877049 | None:intergenic |
| CGGACCAAGGAGTCATGGCG+AGG | 0.624374 | 8:+48877231 | MsG0880044769.01.T01:CDS |
| AATTCTTCAGCATCCCATCA+CGG | 0.624527 | 8:-48877350 | None:intergenic |
| AATTCATGGGTTCCTAGTGA+AGG | 0.624631 | 8:+48877268 | MsG0880044769.01.T01:CDS |
| TCTGGATGATGATCAGAGGA+AGG | 0.626736 | 8:+48876094 | MsG0880044769.01.T01:CDS |
| ACTGTATCTGTATATAACAT+GGG | 0.627241 | 8:-48876645 | None:intergenic |
| TTTACAACAGCTACTAGAGG+TGG | 0.628438 | 8:-48877046 | None:intergenic |
| TGAACGGTATCATAGAGCAC+TGG | 0.630163 | 8:+48876459 | MsG0880044769.01.T01:CDS |
| TTATTGTTATTGGCGGACCA+AGG | 0.631861 | 8:+48877218 | MsG0880044769.01.T01:CDS |
| ATAACTCCGAGAATCAAACA+TGG | 0.632851 | 8:+48876807 | MsG0880044769.01.T01:CDS |
| GATCCCCTAGCACTACGCCC+GGG | 0.636164 | 8:-48876998 | None:intergenic |
| ACAATCTACAAACTAGAACA+TGG | 0.636640 | 8:+48876954 | MsG0880044769.01.T01:CDS |
| GCAAGTAGATTCCATTGTGG+AGG | 0.637868 | 8:-48877292 | None:intergenic |
| GGAGCGGTGAGCTCTATCGT+TGG | 0.642006 | 8:+48876429 | MsG0880044769.01.T01:CDS |
| TCGATCTGGATGATGATCAG+AGG | 0.644226 | 8:+48876090 | MsG0880044769.01.T01:CDS |
| ATTGAATGATTGCCAAAGTG+TGG | 0.647338 | 8:+48876127 | MsG0880044769.01.T01:CDS |
| CAAGAACTGGAAAACAACCT+CGG | 0.650518 | 8:-48875900 | None:intergenic |
| CGCTGATTATGCTGACATGG+AGG | 0.655991 | 8:+48877084 | MsG0880044769.01.T01:CDS |
| ATAGGCCTCCCATTCGAGGA+GGG | 0.657950 | 8:-48876498 | None:intergenic |
| CTCCATGTCAGCATAATCAG+CGG | 0.662179 | 8:-48877083 | None:intergenic |
| CCTATGATCCAATTCGCGAA+CGG | 0.662545 | 8:+48876516 | MsG0880044769.01.T01:CDS |
| TAACTCCGAGAATCAAACAT+GGG | 0.666523 | 8:+48876808 | MsG0880044769.01.T01:CDS |
| CTAGAATTGCAATCTCTCTG+AGG | 0.668609 | 8:-48876736 | None:intergenic |
| CTAGTGAAGGACCTCCACAA+TGG | 0.672606 | 8:+48877281 | MsG0880044769.01.T01:CDS |
| CATAGGCCTCCCATTCGAGG+AGG | 0.672969 | 8:-48876499 | None:intergenic |
| CTAGCAAGTAGATTCCATTG+TGG | 0.677748 | 8:-48877295 | None:intergenic |
| GATTCCAAGCTTCTTACGTG+CGG | 0.696878 | 8:+48876923 | MsG0880044769.01.T01:CDS |
| AAATTCCTAACATGTCACCC+GGG | 0.697406 | 8:+48876981 | MsG0880044769.01.T01:CDS |
| ACAGAAGCAGCATCATGCAG+GGG | 0.699667 | 8:+48876277 | MsG0880044769.01.T01:CDS |
| GAGCTGTCCCGATTCATGCG+CGG | 0.706639 | 8:-48876326 | None:intergenic |
| GCTGCAAAGACTATGTTGGA+AGG | 0.710611 | 8:+48875861 | None:intergenic |
| GCCCAGGAAGATGTGCTCTG+GGG | 0.715567 | 8:+48876853 | MsG0880044769.01.T01:CDS |
| TTCCGCAACATAATCCGGAG+CGG | 0.719088 | 8:+48876413 | MsG0880044769.01.T01:CDS |
| GCGGAAGCTCTGATTCAGCG+AGG | 0.753966 | 8:-48876396 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACTGTATCTGTATATAACAT+GGG | - | Chr8:48876648-48876667 | None:intergenic | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | - | Chr8:48877329-48877348 | None:intergenic | 25.0% |
| !! | ACGGAAATTTTTATGTTATC+GGG | + | Chr8:48876885-48876904 | MsG0880044769.01.T01:CDS | 25.0% |
| !! | GACGGAAATTTTTATGTTAT+CGG | + | Chr8:48876884-48876903 | MsG0880044769.01.T01:CDS | 25.0% |
| !! | TTTTATCGAACTCAATTCAT+GGG | + | Chr8:48877255-48877274 | MsG0880044769.01.T01:CDS | 25.0% |
| ACAATCTACAAACTAGAACA+TGG | + | Chr8:48876954-48876973 | MsG0880044769.01.T01:CDS | 30.0% | |
| CCGGATTTGGAAATAAAAAA+CGG | + | Chr8:48875966-48875985 | MsG0880044769.01.T01:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | - | Chr8:48876649-48876668 | None:intergenic | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | - | Chr8:48877052-48877071 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | + | Chr8:48876704-48876723 | MsG0880044769.01.T01:CDS | 30.0% |
| ! | AGATTGGAATCTTGTTATCA+AGG | + | Chr8:48876041-48876060 | MsG0880044769.01.T01:CDS | 30.0% |
| ! | CGGAAATTTTTATGTTATCG+GGG | + | Chr8:48876886-48876905 | MsG0880044769.01.T01:CDS | 30.0% |
| ! | GAGGTTAAAAAGTACGATAA+AGG | + | Chr8:48877103-48877122 | MsG0880044769.01.T01:CDS | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | + | Chr8:48876887-48876906 | MsG0880044769.01.T01:CDS | 30.0% |
| ! | GTTTTATCGAACTCAATTCA+TGG | + | Chr8:48877254-48877273 | MsG0880044769.01.T01:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | - | Chr8:48875969-48875988 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCTGTCATGTTTT+TGG | + | Chr8:48876160-48876179 | MsG0880044769.01.T01:CDS | 30.0% |
| AACAAAGTGTGGCTTACAAT+TGG | + | Chr8:48877127-48877146 | MsG0880044769.01.T01:CDS | 35.0% | |
| ACACTTTGGCAATCATTCAA+TGG | - | Chr8:48876128-48876147 | None:intergenic | 35.0% | |
| ACGATAAAGGTAACAAAGTG+TGG | + | Chr8:48877116-48877135 | MsG0880044769.01.T01:CDS | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | + | Chr8:48876807-48876826 | MsG0880044769.01.T01:CDS | 35.0% | |
| ATGCTTCATGTGTTCAGATA+AGG | + | Chr8:48876571-48876590 | MsG0880044769.01.T01:CDS | 35.0% | |
| ATTGAATGATTGCCAAAGTG+TGG | + | Chr8:48876127-48876146 | MsG0880044769.01.T01:CDS | 35.0% | |
| CATAATCAGACCTTGAACAT+CGG | - | Chr8:48876367-48876386 | None:intergenic | 35.0% | |
| GAAAAATCTCAGCATTCGTT+CGG | + | Chr8:48876185-48876204 | MsG0880044769.01.T01:CDS | 35.0% | |
| GAAATAAAAAACGGAAAGCG+AGG | + | Chr8:48875975-48875994 | MsG0880044769.01.T01:CDS | 35.0% | |
| GCTTACAATTGGTAGATTAC+CGG | + | Chr8:48877138-48877157 | MsG0880044769.01.T01:CDS | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | + | Chr8:48877208-48877227 | MsG0880044769.01.T01:CDS | 35.0% | |
| GTCTTTCATGAAATTCATGC+CGG | + | Chr8:48875947-48875966 | MsG0880044769.01.T01:CDS | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | + | Chr8:48876808-48876827 | MsG0880044769.01.T01:CDS | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | - | Chr8:48876816-48876835 | None:intergenic | 35.0% | |
| TTCAGATAAGGAGTCTTTAG+CGG | + | Chr8:48876583-48876602 | MsG0880044769.01.T01:CDS | 35.0% | |
| ! | ATCTTGTTATCAAGGTGAGA+TGG | + | Chr8:48876049-48876068 | MsG0880044769.01.T01:CDS | 35.0% |
| ! | CAACAACATTTTCCACACTT+TGG | - | Chr8:48876142-48876161 | None:intergenic | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | + | Chr8:48877307-48877326 | MsG0880044769.01.T01:CDS | 35.0% |
| ! | GATAGGCTTATTGTTATTGG+CGG | + | Chr8:48877211-48877230 | MsG0880044769.01.T01:CDS | 35.0% |
| ! | TTTTATGTTATCGGGGGAAT+TGG | + | Chr8:48876893-48876912 | MsG0880044769.01.T01:CDS | 35.0% |
| AAATTCCTAACATGTCACCC+GGG | + | Chr8:48876981-48877000 | MsG0880044769.01.T01:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | - | Chr8:48876026-48876045 | None:intergenic | 40.0% | |
| AATTCATGGGTTCCTAGTGA+AGG | + | Chr8:48877268-48877287 | MsG0880044769.01.T01:CDS | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | + | Chr8:48876740-48876759 | MsG0880044769.01.T01:CDS | 40.0% | |
| CAAGAACTGGAAAACAACCT+CGG | - | Chr8:48875903-48875922 | None:intergenic | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | + | Chr8:48875953-48875972 | MsG0880044769.01.T01:CDS | 40.0% | |
| CATTCGTTAGAAGCCATTCT+AGG | - | Chr8:48876554-48876573 | None:intergenic | 40.0% | |
| CGATGTTCAAGGTCTGATTA+TGG | + | Chr8:48876365-48876384 | MsG0880044769.01.T01:CDS | 40.0% | |
| CTAGAATTGCAATCTCTCTG+AGG | - | Chr8:48876739-48876758 | None:intergenic | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | - | Chr8:48877298-48877317 | None:intergenic | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | + | Chr8:48876980-48876999 | MsG0880044769.01.T01:CDS | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | + | Chr8:48876609-48876628 | MsG0880044769.01.T01:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | + | Chr8:48876538-48876557 | MsG0880044769.01.T01:CDS | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | + | Chr8:48877337-48877356 | MsG0880044769.01.T01:CDS | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | + | Chr8:48877336-48877355 | MsG0880044769.01.T01:CDS | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | - | Chr8:48877049-48877068 | None:intergenic | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | + | Chr8:48876663-48876682 | MsG0880044769.01.T01:CDS | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | + | Chr8:48876664-48876683 | MsG0880044769.01.T01:CDS | 40.0% |
| ! | TGAAGAAGCAGCTTGATGAT+GGG | + | Chr8:48876219-48876238 | MsG0880044769.01.T01:CDS | 40.0% |
| ! | TTATTGTTATTGGCGGACCA+AGG | + | Chr8:48877218-48877237 | MsG0880044769.01.T01:CDS | 40.0% |
| !! | GTTGTTTTCCAGTTCTTGTC+AGG | + | Chr8:48875905-48875924 | MsG0880044769.01.T01:CDS | 40.0% |
| !! | TCATCATCCAGATCGATTTG+CGG | - | Chr8:48876086-48876105 | None:intergenic | 40.0% |
| AACAGAAGCAGCATCATGCA+GGG | + | Chr8:48876276-48876295 | MsG0880044769.01.T01:CDS | 45.0% | |
| AGAGCTTCCGCAACATAATC+CGG | + | Chr8:48876408-48876427 | MsG0880044769.01.T01:CDS | 45.0% | |
| AGATGGGCATATCCTTGACT+CGG | + | Chr8:48876775-48876794 | MsG0880044769.01.T01:CDS | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | + | Chr8:48876516-48876535 | MsG0880044769.01.T01:CDS | 45.0% | |
| CCTCCCAAACACAAGAAGTT+CGG | - | Chr8:48876615-48876634 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | + | Chr8:48876613-48876632 | MsG0880044769.01.T01:CDS | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | - | Chr8:48877086-48877105 | None:intergenic | 45.0% | |
| CTGAAGAAGCAGCTTGATGA+TGG | + | Chr8:48876218-48876237 | MsG0880044769.01.T01:CDS | 45.0% | |
| CTGGTGGTTGTGATTCAGAT+GGG | + | Chr8:48876759-48876778 | MsG0880044769.01.T01:CDS | 45.0% | |
| GAGGAAGGTTAACAGGAGAT+TGG | + | Chr8:48876025-48876044 | MsG0880044769.01.T01:CDS | 45.0% | |
| GATAAGGAGTCTTTAGCGGT+AGG | + | Chr8:48876587-48876606 | MsG0880044769.01.T01:CDS | 45.0% | |
| GATTCCAAGCTTCTTACGTG+CGG | + | Chr8:48876923-48876942 | MsG0880044769.01.T01:CDS | 45.0% | |
| GCAAGTAGATTCCATTGTGG+AGG | - | Chr8:48877295-48877314 | None:intergenic | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | - | Chr8:48876713-48876732 | None:intergenic | 45.0% | |
| TATGTTATCGGGGGAATTGG+TGG | + | Chr8:48876896-48876915 | MsG0880044769.01.T01:CDS | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | - | Chr8:48876841-48876860 | None:intergenic | 45.0% | |
| TCGATCTGGATGATGATCAG+AGG | + | Chr8:48876090-48876109 | MsG0880044769.01.T01:CDS | 45.0% | |
| TCTGGATGATGATCAGAGGA+AGG | + | Chr8:48876094-48876113 | MsG0880044769.01.T01:CDS | 45.0% | |
| TGAACGGTATCATAGAGCAC+TGG | + | Chr8:48876459-48876478 | MsG0880044769.01.T01:CDS | 45.0% | |
| TGTTGTTCCGCAAATCGATC+TGG | + | Chr8:48876076-48876095 | MsG0880044769.01.T01:CDS | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | - | Chr8:48876842-48876861 | None:intergenic | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | + | Chr8:48876671-48876690 | MsG0880044769.01.T01:CDS | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | + | Chr8:48877194-48877213 | MsG0880044769.01.T01:CDS | 45.0% |
| ! | GAGATTGCAATTCTAGCTGG+TGG | + | Chr8:48876743-48876762 | MsG0880044769.01.T01:CDS | 45.0% |
| ! | GGTACCGAACTTCTTGTGTT+TGG | + | Chr8:48876608-48876627 | MsG0880044769.01.T01:CDS | 45.0% |
| AAACAACCTCGGAACCAAGC+AGG | - | Chr8:48875892-48875911 | None:intergenic | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | + | Chr8:48876277-48876296 | MsG0880044769.01.T01:CDS | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | + | Chr8:48877179-48877198 | MsG0880044769.01.T01:CDS | 50.0% | |
| AGCAGCTTCGATGAACGGTT+GGG | + | Chr8:48877165-48877184 | MsG0880044769.01.T01:CDS | 50.0% | |
| AGGCAGAGGCAGAGAACAAT+TGG | + | Chr8:48875925-48875944 | MsG0880044769.01.T01:CDS | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | + | Chr8:48876519-48876538 | MsG0880044769.01.T01:CDS | 50.0% | |
| CATTGTGGAGGTCCTTCACT+AGG | - | Chr8:48877283-48877302 | None:intergenic | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | + | Chr8:48876612-48876631 | MsG0880044769.01.T01:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | - | Chr8:48876519-48876538 | None:intergenic | 50.0% | |
| CCTGTCTAAGCCGATGTTCA+AGG | + | Chr8:48876354-48876373 | MsG0880044769.01.T01:CDS | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | + | Chr8:48877180-48877199 | MsG0880044769.01.T01:CDS | 50.0% | |
| CTAGTGAAGGACCTCCACAA+TGG | + | Chr8:48877281-48877300 | MsG0880044769.01.T01:CDS | 50.0% | |
| GAACAGAAGCAGCATCATGC+AGG | + | Chr8:48876275-48876294 | MsG0880044769.01.T01:CDS | 50.0% | |
| GAGAGAGCAGCTTCGATGAA+CGG | + | Chr8:48877160-48877179 | MsG0880044769.01.T01:CDS | 50.0% | |
| GCTGGTGGTTGTGATTCAGA+TGG | + | Chr8:48876758-48876777 | MsG0880044769.01.T01:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | + | Chr8:48876250-48876269 | MsG0880044769.01.T01:CDS | 50.0% | |
| TATAGAGCTCAGCCGAGTCA+AGG | - | Chr8:48876790-48876809 | None:intergenic | 50.0% | |
| TATCGTTGGCGGAGACTGAA+CGG | + | Chr8:48876443-48876462 | MsG0880044769.01.T01:CDS | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | + | Chr8:48876837-48876856 | MsG0880044769.01.T01:CDS | 50.0% | |
| TTCATCGAAGCTGCTCTCTC+CGG | - | Chr8:48877160-48877179 | None:intergenic | 50.0% | |
| TTCCAGTTCTTGTCAGGCAG+AGG | + | Chr8:48875911-48875930 | MsG0880044769.01.T01:CDS | 50.0% | |
| TTCCGCAACATAATCCGGAG+CGG | + | Chr8:48876413-48876432 | MsG0880044769.01.T01:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | + | Chr8:48876678-48876697 | MsG0880044769.01.T01:CDS | 50.0% |
| ! | ACTTTTGCCGCGCATGAATC+GGG | + | Chr8:48876319-48876338 | MsG0880044769.01.T01:CDS | 50.0% |
| ! | CACTTTTGCCGCGCATGAAT+CGG | + | Chr8:48876318-48876337 | MsG0880044769.01.T01:CDS | 50.0% |
| ! | CGCTGATTATGCTGACATGG+AGG | + | Chr8:48877084-48877103 | MsG0880044769.01.T01:CDS | 50.0% |
| ! | GGTCTTGCATTTAGGGCATG+TGG | + | Chr8:48877187-48877206 | MsG0880044769.01.T01:CDS | 50.0% |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | - | Chr8:48876269-48876288 | None:intergenic | 50.0% |
| !! | CCTTGAACATCGGCTTAGAC+AGG | - | Chr8:48876357-48876376 | None:intergenic | 50.0% |
| !! | GATGTGCTCTGGGGTATTCA+TGG | + | Chr8:48876862-48876881 | MsG0880044769.01.T01:CDS | 50.0% |
| !! | TGCTCTGGGGTATTCATGGA+CGG | + | Chr8:48876866-48876885 | MsG0880044769.01.T01:CDS | 50.0% |
| AAACCCTCGCCATGACTCCT+TGG | - | Chr8:48877238-48877257 | None:intergenic | 55.0% | |
| AACGATAGAGCTCACCGCTC+CGG | - | Chr8:48876430-48876449 | None:intergenic | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | + | Chr8:48876851-48876870 | MsG0880044769.01.T01:CDS | 55.0% | |
| ACCCCAGAGCACATCTTCCT+GGG | - | Chr8:48876857-48876876 | None:intergenic | 55.0% | |
| AGCCCAGGAAGATGTGCTCT+GGG | + | Chr8:48876852-48876871 | MsG0880044769.01.T01:CDS | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | - | Chr8:48877041-48877060 | None:intergenic | 55.0% | |
| ATAGGCCTCCCATTCGAGGA+GGG | - | Chr8:48876501-48876520 | None:intergenic | 55.0% | |
| ATGAAGATGAACCGCAGCCG+AGG | + | Chr8:48876006-48876025 | MsG0880044769.01.T01:CDS | 55.0% | |
| CACCGCTCCGGATTATGTTG+CGG | - | Chr8:48876418-48876437 | None:intergenic | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+CGG | - | Chr8:48876020-48876039 | None:intergenic | 55.0% | |
| GAGCAGCTTCGATGAACGGT+TGG | + | Chr8:48877164-48877183 | MsG0880044769.01.T01:CDS | 55.0% | |
| GATCATAGGCCTCCCATTCG+AGG | - | Chr8:48876505-48876524 | None:intergenic | 55.0% | |
| GCAGCTTCGATGAACGGTTG+GGG | + | Chr8:48877166-48877185 | MsG0880044769.01.T01:CDS | 55.0% | |
| GTTGGAAGGTCGTTCCTGCT+TGG | + | Chr8:48875875-48875894 | MsG0880044769.01.T01:CDS | 55.0% | |
| TACCCCAGAGCACATCTTCC+TGG | - | Chr8:48876858-48876877 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | - | Chr8:48876527-48876546 | None:intergenic | 55.0% | |
| TGCCTCTGCCTGACAAGAAC+TGG | - | Chr8:48875916-48875935 | None:intergenic | 55.0% | |
| TTCGTGTGCCCTCCTCGAAT+GGG | + | Chr8:48876490-48876509 | MsG0880044769.01.T01:CDS | 55.0% | |
| TTTCGTGTGCCCTCCTCGAA+TGG | + | Chr8:48876489-48876508 | MsG0880044769.01.T01:CDS | 55.0% | |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | + | Chr8:48877226-48877245 | MsG0880044769.01.T01:CDS | 55.0% |
| ! | CGCCGCTGATTATGCTGACA+TGG | + | Chr8:48877081-48877100 | MsG0880044769.01.T01:CDS | 55.0% |
| AGATGAACCGCAGCCGAGGA+AGG | + | Chr8:48876010-48876029 | MsG0880044769.01.T01:CDS | 60.0% | |
| CAAGCTTCTTACGTGCGGCG+AGG | + | Chr8:48876928-48876947 | MsG0880044769.01.T01:CDS | 60.0% | |
| CATAGGCCTCCCATTCGAGG+AGG | - | Chr8:48876502-48876521 | None:intergenic | 60.0% | |
| CGCAGCCGAGGAAGGTTAAC+AGG | + | Chr8:48876018-48876037 | MsG0880044769.01.T01:CDS | 60.0% | |
| CTACGCCCGGGTGACATGTT+AGG | - | Chr8:48876989-48877008 | None:intergenic | 60.0% | |
| CTCGCCGCACGTAAGAAGCT+TGG | - | Chr8:48876930-48876949 | None:intergenic | 60.0% | |
| GAGCTGTCCCGATTCATGCG+CGG | - | Chr8:48876329-48876348 | None:intergenic | 60.0% | |
| GCCCAGGAAGATGTGCTCTG+GGG | + | Chr8:48876853-48876872 | MsG0880044769.01.T01:CDS | 60.0% | |
| GCGGTGAGCTCTATCGTTGG+CGG | + | Chr8:48876432-48876451 | MsG0880044769.01.T01:CDS | 60.0% | |
| GGACCAAGGAGTCATGGCGA+GGG | + | Chr8:48877232-48877251 | MsG0880044769.01.T01:CDS | 60.0% | |
| GGAGCGGTGAGCTCTATCGT+TGG | + | Chr8:48876429-48876448 | MsG0880044769.01.T01:CDS | 60.0% | |
| GTCGTTCCTGCTTGGTTCCG+AGG | + | Chr8:48875883-48875902 | MsG0880044769.01.T01:CDS | 60.0% | |
| ! | GCGGAAGCTCTGATTCAGCG+AGG | - | Chr8:48876399-48876418 | None:intergenic | 60.0% |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | - | Chr8:48876258-48876277 | None:intergenic | 60.0% |
| CGATCCCCTAGCACTACGCC+CGG | - | Chr8:48877002-48877021 | None:intergenic | 65.0% | |
| CGGACCAAGGAGTCATGGCG+AGG | + | Chr8:48877231-48877250 | MsG0880044769.01.T01:CDS | 65.0% | |
| CGGGCGTAGTGCTAGGGGAT+CGG | + | Chr8:48877000-48877019 | MsG0880044769.01.T01:CDS | 65.0% | |
| GATCCCCTAGCACTACGCCC+GGG | - | Chr8:48877001-48877020 | None:intergenic | 65.0% | |
| GTCACCCGGGCGTAGTGCTA+GGG | + | Chr8:48876994-48877013 | MsG0880044769.01.T01:CDS | 65.0% | |
| GTGTGCCCTCCTCGAATGGG+AGG | + | Chr8:48876493-48876512 | MsG0880044769.01.T01:CDS | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | - | Chr8:48877035-48877054 | None:intergenic | 65.0% | |
| TCACCCGGGCGTAGTGCTAG+GGG | + | Chr8:48876995-48877014 | MsG0880044769.01.T01:CDS | 65.0% | |
| TGTCACCCGGGCGTAGTGCT+AGG | + | Chr8:48876993-48877012 | MsG0880044769.01.T01:CDS | 65.0% | |
| GGAGATGCCTGCCACAGCCG+AGG | + | Chr8:48877021-48877040 | MsG0880044769.01.T01:CDS | 70.0% | |
| GGTGGTGCCTCGGCTGTGGC+AGG | - | Chr8:48877031-48877050 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 48875873 | 48877366 | 48875873 | ID=MsG0880044769.01;Name=MsG0880044769.01 |
| Chr8 | mRNA | 48875873 | 48877366 | 48875873 | ID=MsG0880044769.01.T01;Parent=MsG0880044769.01;Name=MsG0880044769.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|497 |
| Chr8 | exon | 48875873 | 48877366 | 48875873 | ID=MsG0880044769.01.T01:exon:20271;Parent=MsG0880044769.01.T01 |
| Chr8 | CDS | 48875873 | 48877366 | 48875873 | ID=MsG0880044769.01.T01:cds;Parent=MsG0880044769.01.T01 |
| Gene Sequence |
| Protein sequence |
