AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021298.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021298.01.T02 MTR_4g071060 98.066 362 7 0 1 362 1 362 0.0 748
MsG0480021298.01.T02 MTR_1g023210 70.380 368 97 6 1 360 1 364 0.0 532
MsG0480021298.01.T02 MTR_4g073660 68.132 364 76 6 3 363 4 330 7.68e-177 494
MsG0480021298.01.T02 MTR_4g072340 67.935 368 76 7 1 363 1 331 1.11e-176 494
MsG0480021298.01.T02 MTR_4g072790 68.681 364 70 7 3 363 5 327 1.37e-176 493
MsG0480021298.01.T02 MTR_1g094135 53.911 358 156 5 10 360 15 370 1.42e-141 407
MsG0480021298.01.T02 MTR_1g107550 42.667 300 146 7 50 341 54 335 5.89e-68 221
MsG0480021298.01.T02 MTR_4g079770 38.310 355 178 13 5 348 12 336 8.53e-66 212
MsG0480021298.01.T02 MTR_4g047610 40.063 317 152 10 54 353 44 339 2.31e-65 211
MsG0480021298.01.T02 MTR_4g125300 38.292 363 184 11 8 353 6 345 5.88e-65 210
MsG0480021298.01.T02 MTR_4g079470 40.317 315 160 11 45 348 39 336 8.38e-65 209
MsG0480021298.01.T02 MTR_4g079800 39.062 320 167 11 45 353 39 341 5.19e-64 207
MsG0480021298.01.T02 MTR_5g022560 39.252 321 166 11 45 353 37 340 1.91e-63 206
MsG0480021298.01.T02 MTR_4g094918 39.216 357 155 14 5 341 7 321 4.37e-63 205
MsG0480021298.01.T02 MTR_3g102220 36.103 349 188 9 5 341 16 341 5.05e-63 208
MsG0480021298.01.T02 MTR_1g018840 38.746 351 167 12 9 341 21 341 7.71e-63 208
MsG0480021298.01.T02 MTR_1g018840 38.746 351 167 12 9 341 21 341 1.10e-62 207
MsG0480021298.01.T02 MTR_4g079440 33.708 356 208 9 5 353 7 341 1.47e-62 204
MsG0480021298.01.T02 MTR_3g116080 38.291 316 167 10 48 353 47 344 3.41e-62 203
MsG0480021298.01.T02 MTR_4g080700 37.107 318 175 8 38 348 32 331 6.31e-62 202
MsG0480021298.01.T02 MTR_4g080730 37.417 302 166 7 54 348 46 331 1.19e-61 201
MsG0480021298.01.T02 MTR_4g107930 39.228 311 163 9 54 353 46 341 5.47e-61 199
MsG0480021298.01.T02 MTR_3g112430 37.730 326 160 12 48 353 36 338 8.38e-59 197
MsG0480021298.01.T02 MTR_4g080360 35.831 307 169 9 54 348 43 333 1.66e-57 190
MsG0480021298.01.T02 MTR_3g075390 37.458 299 158 8 63 348 54 336 1.94e-57 191
MsG0480021298.01.T02 MTR_2g075830 37.417 302 168 6 54 348 45 332 1.96e-57 190
MsG0480021298.01.T02 MTR_4g104370 38.033 305 157 10 58 348 49 335 6.24e-56 187
MsG0480021298.01.T02 MTR_2g015850 39.437 284 149 8 64 341 78 344 3.26e-55 185
MsG0480021298.01.T02 MTR_4g065077 33.604 369 201 13 4 352 8 352 3.52e-55 185
MsG0480021298.01.T02 MTR_2g090890 35.000 320 180 8 48 359 39 338 1.73e-54 182
MsG0480021298.01.T02 MTR_2g015920 32.258 372 196 14 8 350 8 352 4.48e-54 182
MsG0480021298.01.T02 MTR_2g016180 35.826 321 172 11 48 353 51 352 4.86e-54 185
MsG0480021298.01.T02 MTR_2g016270 35.423 319 161 11 48 353 51 337 3.21e-53 183
MsG0480021298.01.T02 MTR_2g083930 36.336 333 179 14 41 358 30 344 2.84e-52 177
MsG0480021298.01.T02 MTR_8g086470 33.908 348 184 12 4 341 24 335 7.31e-52 176
MsG0480021298.01.T02 MTR_2g015930 30.579 363 211 12 6 349 11 351 4.13e-48 166
MsG0480021298.01.T02 MTR_7g078600 32.288 319 179 9 42 348 36 329 2.47e-46 161
MsG0480021298.01.T02 MTR_2g067900 33.929 336 175 14 42 353 10 322 9.39e-45 157
MsG0480021298.01.T02 MTR_7g079230 31.056 322 190 8 37 348 28 327 6.99e-43 152
MsG0480021298.01.T02 MTR_8g087510 50.735 136 56 3 172 306 23 148 7.64e-42 144
MsG0480021298.01.T02 MTR_1g023810 40.991 222 111 7 129 347 47 251 1.37e-40 144
MsG0480021298.01.T02 MTR_2g064475 30.623 369 178 15 44 362 12 352 1.69e-38 141
MsG0480021298.01.T02 MTR_2g067560 33.639 327 164 13 42 341 10 310 5.27e-38 145
MsG0480021298.01.T02 MTR_2g066980 28.877 374 179 16 7 355 4 315 2.25e-33 126
MsG0480021298.01.T02 MTR_7g078630 27.574 272 153 5 48 308 706 944 3.62e-24 104
MsG0480021298.01.T02 MTR_7g111050 29.861 288 155 14 95 353 63 332 2.01e-23 100
MsG0480021298.01.T02 MTR_7g111060 28.671 286 161 12 95 353 66 335 2.05e-22 97.4
MsG0480021298.01.T02 MTR_1g025450 36.957 184 87 7 126 306 50 207 8.58e-21 94.0
MsG0480021298.01.T02 MTR_2g015840 34.337 166 95 5 29 184 18 179 2.72e-19 87.0
MsG0480021298.01.T02 MTR_2g015840 34.746 118 69 3 244 360 161 271 1.36e-13 70.5
MsG0480021298.01.T02 MTR_7g078310 41.748 103 51 2 130 230 151 246 1.02e-15 76.6
MsG0480021298.01.T02 MTR_2g047960 42.391 92 45 1 135 226 2 85 4.59e-15 70.9
MsG0480021298.01.T02 MTR_3g029560 27.737 274 139 14 104 358 4 237 3.76e-12 65.9
MsG0480021298.01.T02 MTR_7g111050 28.926 242 131 13 95 307 58 287 8.27e-12 65.9
MsG0480021298.01.T01 MTR_4g071060 98.066 362 7 0 1 362 1 362 0.0 748
MsG0480021298.01.T01 MTR_1g023210 70.380 368 97 6 1 360 1 364 0.0 532
MsG0480021298.01.T01 MTR_4g073660 68.132 364 76 6 3 363 4 330 7.68e-177 494
MsG0480021298.01.T01 MTR_4g072340 67.935 368 76 7 1 363 1 331 1.11e-176 494
MsG0480021298.01.T01 MTR_4g072790 68.681 364 70 7 3 363 5 327 1.37e-176 493
MsG0480021298.01.T01 MTR_1g094135 53.911 358 156 5 10 360 15 370 1.42e-141 407
MsG0480021298.01.T01 MTR_1g107550 42.667 300 146 7 50 341 54 335 5.89e-68 221
MsG0480021298.01.T01 MTR_4g079770 38.310 355 178 13 5 348 12 336 8.53e-66 212
MsG0480021298.01.T01 MTR_4g047610 40.063 317 152 10 54 353 44 339 2.31e-65 211
MsG0480021298.01.T01 MTR_4g125300 38.292 363 184 11 8 353 6 345 5.88e-65 210
MsG0480021298.01.T01 MTR_4g079470 40.317 315 160 11 45 348 39 336 8.38e-65 209
MsG0480021298.01.T01 MTR_4g079800 39.062 320 167 11 45 353 39 341 5.19e-64 207
MsG0480021298.01.T01 MTR_5g022560 39.252 321 166 11 45 353 37 340 1.91e-63 206
MsG0480021298.01.T01 MTR_4g094918 39.216 357 155 14 5 341 7 321 4.37e-63 205
MsG0480021298.01.T01 MTR_3g102220 36.103 349 188 9 5 341 16 341 5.05e-63 208
MsG0480021298.01.T01 MTR_1g018840 38.746 351 167 12 9 341 21 341 7.71e-63 208
MsG0480021298.01.T01 MTR_1g018840 38.746 351 167 12 9 341 21 341 1.10e-62 207
MsG0480021298.01.T01 MTR_4g079440 33.708 356 208 9 5 353 7 341 1.47e-62 204
MsG0480021298.01.T01 MTR_3g116080 38.291 316 167 10 48 353 47 344 3.41e-62 203
MsG0480021298.01.T01 MTR_4g080700 37.107 318 175 8 38 348 32 331 6.31e-62 202
MsG0480021298.01.T01 MTR_4g080730 37.417 302 166 7 54 348 46 331 1.19e-61 201
MsG0480021298.01.T01 MTR_4g107930 39.228 311 163 9 54 353 46 341 5.47e-61 199
MsG0480021298.01.T01 MTR_3g112430 37.730 326 160 12 48 353 36 338 8.38e-59 197
MsG0480021298.01.T01 MTR_4g080360 35.831 307 169 9 54 348 43 333 1.66e-57 190
MsG0480021298.01.T01 MTR_3g075390 37.458 299 158 8 63 348 54 336 1.94e-57 191
MsG0480021298.01.T01 MTR_2g075830 37.417 302 168 6 54 348 45 332 1.96e-57 190
MsG0480021298.01.T01 MTR_4g104370 38.033 305 157 10 58 348 49 335 6.24e-56 187
MsG0480021298.01.T01 MTR_2g015850 39.437 284 149 8 64 341 78 344 3.26e-55 185
MsG0480021298.01.T01 MTR_4g065077 33.604 369 201 13 4 352 8 352 3.52e-55 185
MsG0480021298.01.T01 MTR_2g090890 35.000 320 180 8 48 359 39 338 1.73e-54 182
MsG0480021298.01.T01 MTR_2g015920 32.258 372 196 14 8 350 8 352 4.48e-54 182
MsG0480021298.01.T01 MTR_2g016180 35.826 321 172 11 48 353 51 352 4.86e-54 185
MsG0480021298.01.T01 MTR_2g016270 35.423 319 161 11 48 353 51 337 3.21e-53 183
MsG0480021298.01.T01 MTR_2g083930 36.336 333 179 14 41 358 30 344 2.84e-52 177
MsG0480021298.01.T01 MTR_8g086470 33.908 348 184 12 4 341 24 335 7.31e-52 176
MsG0480021298.01.T01 MTR_2g015930 30.579 363 211 12 6 349 11 351 4.13e-48 166
MsG0480021298.01.T01 MTR_7g078600 32.288 319 179 9 42 348 36 329 2.47e-46 161
MsG0480021298.01.T01 MTR_2g067900 33.929 336 175 14 42 353 10 322 9.39e-45 157
MsG0480021298.01.T01 MTR_7g079230 31.056 322 190 8 37 348 28 327 6.99e-43 152
MsG0480021298.01.T01 MTR_8g087510 50.735 136 56 3 172 306 23 148 7.64e-42 144
MsG0480021298.01.T01 MTR_1g023810 40.991 222 111 7 129 347 47 251 1.37e-40 144
MsG0480021298.01.T01 MTR_2g064475 30.623 369 178 15 44 362 12 352 1.69e-38 141
MsG0480021298.01.T01 MTR_2g067560 33.639 327 164 13 42 341 10 310 5.27e-38 145
MsG0480021298.01.T01 MTR_2g066980 28.877 374 179 16 7 355 4 315 2.25e-33 126
MsG0480021298.01.T01 MTR_7g078630 27.574 272 153 5 48 308 706 944 3.62e-24 104
MsG0480021298.01.T01 MTR_7g111050 29.861 288 155 14 95 353 63 332 2.01e-23 100
MsG0480021298.01.T01 MTR_7g111060 28.671 286 161 12 95 353 66 335 2.05e-22 97.4
MsG0480021298.01.T01 MTR_1g025450 36.957 184 87 7 126 306 50 207 8.58e-21 94.0
MsG0480021298.01.T01 MTR_2g015840 34.337 166 95 5 29 184 18 179 2.72e-19 87.0
MsG0480021298.01.T01 MTR_2g015840 34.746 118 69 3 244 360 161 271 1.36e-13 70.5
MsG0480021298.01.T01 MTR_7g078310 41.748 103 51 2 130 230 151 246 1.02e-15 76.6
MsG0480021298.01.T01 MTR_2g047960 42.391 92 45 1 135 226 2 85 4.59e-15 70.9
MsG0480021298.01.T01 MTR_3g029560 27.737 274 139 14 104 358 4 237 3.76e-12 65.9
MsG0480021298.01.T01 MTR_7g111050 28.926 242 131 13 95 307 58 287 8.27e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021298.01.T02 AT2G21430 74.167 360 90 3 1 358 1 359 0.0 561
MsG0480021298.01.T02 AT4G39090 72.404 366 97 3 1 362 1 366 0.0 554
MsG0480021298.01.T02 AT4G16190 67.914 374 108 5 1 363 1 373 0.0 511
MsG0480021298.01.T02 AT3G54940 58.726 361 132 7 6 356 9 362 1.70e-153 436
MsG0480021298.01.T02 AT3G54940 54.182 275 110 6 6 271 9 276 7.84e-100 297
MsG0480021298.01.T02 AT5G60360 39.640 333 173 9 31 353 39 353 1.58e-67 217
MsG0480021298.01.T02 AT3G45310 38.764 356 183 11 10 348 11 348 3.17e-67 216
MsG0480021298.01.T02 AT5G60360 40.061 327 168 9 31 347 39 347 1.38e-66 214
MsG0480021298.01.T02 AT3G19400 40.645 310 154 9 57 353 53 345 1.59e-66 214
MsG0480021298.01.T02 AT5G60360 39.877 326 168 9 31 346 39 346 4.32e-66 213
MsG0480021298.01.T02 AT3G45310 38.418 354 183 11 10 346 11 346 1.22e-65 212
MsG0480021298.01.T02 AT3G19390 38.227 361 182 12 8 353 8 342 4.93e-65 213
MsG0480021298.01.T02 AT1G47128 40.541 296 156 5 50 341 54 333 1.09e-64 213
MsG0480021298.01.T02 AT1G09850 39.198 324 166 11 48 359 32 336 2.11e-64 211
MsG0480021298.01.T02 AT1G20850 38.801 317 166 8 48 353 51 350 9.62e-64 207
MsG0480021298.01.T02 AT5G43060 41.844 282 143 7 64 341 70 334 8.87e-63 207
MsG0480021298.01.T02 AT1G29090 37.466 363 177 14 6 348 14 346 1.84e-62 204
MsG0480021298.01.T02 AT5G45890 34.435 363 195 10 1 348 3 337 3.38e-62 202
MsG0480021298.01.T02 AT1G06260 38.154 325 160 13 45 353 40 339 4.78e-62 202
MsG0480021298.01.T02 AT3G43960 40.956 293 152 7 56 341 49 327 7.91e-62 202
MsG0480021298.01.T02 AT4G35350 36.709 316 173 8 48 353 51 349 1.71e-60 199
MsG0480021298.01.T02 AT4G36880 39.446 289 148 6 64 341 69 341 2.12e-60 199
MsG0480021298.01.T02 AT3G48340 37.069 348 177 11 9 341 4 324 2.13e-59 196
MsG0480021298.01.T02 AT4G23520 34.341 364 194 14 9 353 9 346 1.11e-58 194
MsG0480021298.01.T02 AT2G27420 36.593 317 161 11 54 348 41 339 1.16e-57 191
MsG0480021298.01.T02 AT5G50260 39.423 312 144 11 58 348 47 334 5.90e-56 187
MsG0480021298.01.T02 AT3G48350 35.143 350 186 11 7 342 3 325 1.14e-54 184
MsG0480021298.01.T02 AT1G29080 36.943 314 168 9 54 353 45 342 2.36e-54 182
MsG0480021298.01.T02 AT2G34080 36.334 311 163 11 54 348 45 336 1.23e-53 181
MsG0480021298.01.T02 AT3G49340 34.505 313 172 11 54 351 41 335 1.32e-52 177
MsG0480021298.01.T02 AT4G11310 32.033 359 205 10 6 348 9 344 2.26e-51 175
MsG0480021298.01.T02 AT4G11320 34.603 315 173 8 48 348 56 351 1.18e-50 173
MsG0480021298.01.T02 AT4G11320 34.603 315 173 8 48 348 56 351 1.18e-50 173
MsG0480021298.01.T02 AT3G19400 40.444 225 122 4 57 276 53 270 3.43e-50 170
MsG0480021298.01.T02 AT4G35350 35.622 233 137 4 48 276 51 274 8.67e-45 155
MsG0480021298.01.T02 AT1G29110 32.476 311 165 9 54 348 44 325 6.86e-43 152
MsG0480021298.01.T02 AT3G48350 33.115 305 154 10 7 287 3 281 5.52e-39 140
MsG0480021298.01.T02 AT4G01610 29.560 318 169 14 61 349 40 331 5.95e-23 99.0
MsG0480021298.01.T02 AT1G02305 30.556 288 151 15 95 352 69 337 6.81e-23 98.6
MsG0480021298.01.T02 AT4G01610 29.245 318 170 14 61 349 40 331 1.10e-21 95.1
MsG0480021298.01.T02 AT1G02300 27.597 308 154 17 95 352 66 354 3.88e-18 85.1
MsG0480021298.01.T01 AT2G21430 74.167 360 90 3 1 358 1 359 0.0 561
MsG0480021298.01.T01 AT4G39090 72.404 366 97 3 1 362 1 366 0.0 554
MsG0480021298.01.T01 AT4G16190 67.914 374 108 5 1 363 1 373 0.0 511
MsG0480021298.01.T01 AT3G54940 58.726 361 132 7 6 356 9 362 1.70e-153 436
MsG0480021298.01.T01 AT3G54940 54.182 275 110 6 6 271 9 276 7.84e-100 297
MsG0480021298.01.T01 AT5G60360 39.640 333 173 9 31 353 39 353 1.58e-67 217
MsG0480021298.01.T01 AT3G45310 38.764 356 183 11 10 348 11 348 3.17e-67 216
MsG0480021298.01.T01 AT5G60360 40.061 327 168 9 31 347 39 347 1.38e-66 214
MsG0480021298.01.T01 AT3G19400 40.645 310 154 9 57 353 53 345 1.59e-66 214
MsG0480021298.01.T01 AT5G60360 39.877 326 168 9 31 346 39 346 4.32e-66 213
MsG0480021298.01.T01 AT3G45310 38.418 354 183 11 10 346 11 346 1.22e-65 212
MsG0480021298.01.T01 AT3G19390 38.227 361 182 12 8 353 8 342 4.93e-65 213
MsG0480021298.01.T01 AT1G47128 40.541 296 156 5 50 341 54 333 1.09e-64 213
MsG0480021298.01.T01 AT1G09850 39.198 324 166 11 48 359 32 336 2.11e-64 211
MsG0480021298.01.T01 AT1G20850 38.801 317 166 8 48 353 51 350 9.62e-64 207
MsG0480021298.01.T01 AT5G43060 41.844 282 143 7 64 341 70 334 8.87e-63 207
MsG0480021298.01.T01 AT1G29090 37.466 363 177 14 6 348 14 346 1.84e-62 204
MsG0480021298.01.T01 AT5G45890 34.435 363 195 10 1 348 3 337 3.38e-62 202
MsG0480021298.01.T01 AT1G06260 38.154 325 160 13 45 353 40 339 4.78e-62 202
MsG0480021298.01.T01 AT3G43960 40.956 293 152 7 56 341 49 327 7.91e-62 202
MsG0480021298.01.T01 AT4G35350 36.709 316 173 8 48 353 51 349 1.71e-60 199
MsG0480021298.01.T01 AT4G36880 39.446 289 148 6 64 341 69 341 2.12e-60 199
MsG0480021298.01.T01 AT3G48340 37.069 348 177 11 9 341 4 324 2.13e-59 196
MsG0480021298.01.T01 AT4G23520 34.341 364 194 14 9 353 9 346 1.11e-58 194
MsG0480021298.01.T01 AT2G27420 36.593 317 161 11 54 348 41 339 1.16e-57 191
MsG0480021298.01.T01 AT5G50260 39.423 312 144 11 58 348 47 334 5.90e-56 187
MsG0480021298.01.T01 AT3G48350 35.143 350 186 11 7 342 3 325 1.14e-54 184
MsG0480021298.01.T01 AT1G29080 36.943 314 168 9 54 353 45 342 2.36e-54 182
MsG0480021298.01.T01 AT2G34080 36.334 311 163 11 54 348 45 336 1.23e-53 181
MsG0480021298.01.T01 AT3G49340 34.505 313 172 11 54 351 41 335 1.32e-52 177
MsG0480021298.01.T01 AT4G11310 32.033 359 205 10 6 348 9 344 2.26e-51 175
MsG0480021298.01.T01 AT4G11320 34.603 315 173 8 48 348 56 351 1.18e-50 173
MsG0480021298.01.T01 AT4G11320 34.603 315 173 8 48 348 56 351 1.18e-50 173
MsG0480021298.01.T01 AT3G19400 40.444 225 122 4 57 276 53 270 3.43e-50 170
MsG0480021298.01.T01 AT4G35350 35.622 233 137 4 48 276 51 274 8.67e-45 155
MsG0480021298.01.T01 AT1G29110 32.476 311 165 9 54 348 44 325 6.86e-43 152
MsG0480021298.01.T01 AT3G48350 33.115 305 154 10 7 287 3 281 5.52e-39 140
MsG0480021298.01.T01 AT4G01610 29.560 318 169 14 61 349 40 331 5.95e-23 99.0
MsG0480021298.01.T01 AT1G02305 30.556 288 151 15 95 352 69 337 6.81e-23 98.6
MsG0480021298.01.T01 AT4G01610 29.245 318 170 14 61 349 40 331 1.10e-21 95.1
MsG0480021298.01.T01 AT1G02300 27.597 308 154 17 95 352 66 354 3.88e-18 85.1

Find 32 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATATATACTGCATTTA+AGG 0.130654 4:-56407949 None:intergenic
GGTGAGACTTGGGGAGAAAA+TGG 0.310928 4:+56408113 MsG0480021298.01.T01:CDS
CTGGAGCCTATTCGCCTATT+AGG 0.320950 4:+56408051 MsG0480021298.01.T01:CDS
TGAATACTGGCAACAATTCA+TGG 0.349199 4:-56408278 None:intergenic
ACTAGATCATGGAGTGTTAC+TGG 0.371273 4:+56408016 MsG0480021298.01.T01:CDS
AGTCTCTTTGAGCATATGTA+TGG 0.401014 4:-56407996 None:intergenic
GGCTTCTCCTTCATCCTAAT+AGG 0.407412 4:-56408065 None:intergenic
GGAGTGTTACTGGTGGGATA+TGG 0.410428 4:+56408026 MsG0480021298.01.T01:CDS
CCACATTAAAATATGAATAC+TGG 0.419218 4:-56408291 None:intergenic
GGATGAAGGAGAAGCCATAT+TGG 0.423435 4:+56408072 MsG0480021298.01.T01:CDS
CTTCATCCTAATAGGCGAAT+AGG 0.432818 4:-56408057 None:intergenic
AACAACAATTTATAGATGTA+TGG 0.449877 4:+56408378 MsG0480021298.01.T01:three_prime_UTR
AAAACTCATGGGGTGAGACT+TGG 0.466256 4:+56408102 MsG0480021298.01.T01:CDS
AAACTCATGGGGTGAGACTT+GGG 0.470356 4:+56408103 MsG0480021298.01.T01:CDS
ATGGATACTACAAAATATGC+AGG 0.476628 4:+56408132 MsG0480021298.01.T01:CDS
TTACTGGTGGGATATGGATC+TGG 0.507620 4:+56408032 MsG0480021298.01.T01:CDS
CTATTCGCCTATTAGGATGA+AGG 0.564118 4:+56408058 MsG0480021298.01.T01:CDS
TGCTCAAAGAGACTAGATCA+TGG 0.566764 4:+56408005 MsG0480021298.01.T01:CDS
GTCTCTTTGAGCATATGTAT+GGG 0.587803 4:-56407995 None:intergenic
AACTCATGGGGTGAGACTTG+GGG 0.593059 4:+56408104 MsG0480021298.01.T01:CDS
TGGATACTACAAAATATGCA+GGG 0.599253 4:+56408133 MsG0480021298.01.T01:CDS
GTATATATGCAAACATACAT+TGG 0.601664 4:+56407960 MsG0480021298.01.T01:CDS
TATATGCGGAGTGGACTCCA+TGG 0.603926 4:+56408163 MsG0480021298.01.T01:CDS
TATATGCAAACATACATTGG+AGG 0.612222 4:+56407963 MsG0480021298.01.T01:CDS
CTACTGAGTAGTAGTATGAA+CGG 0.624053 4:-56408201 None:intergenic
GGACTCCATGGTTTCTACTG+TGG 0.626354 4:+56408175 MsG0480021298.01.T01:CDS
GATCATGGAGTGTTACTGGT+GGG 0.636411 4:+56408020 MsG0480021298.01.T01:CDS
GGCAGCCACAGTAGAAACCA+TGG 0.655273 4:-56408180 None:intergenic
AGATCATGGAGTGTTACTGG+TGG 0.667806 4:+56408019 MsG0480021298.01.T01:CDS
GGATACTACAAAATATGCAG+GGG 0.670950 4:+56408134 MsG0480021298.01.T01:CDS
TGCAGGGGACGAAATATATG+CGG 0.679393 4:+56408149 MsG0480021298.01.T01:CDS
GGGACGAAATATATGCGGAG+TGG 0.687467 4:+56408154 MsG0480021298.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATATGTTATCTAAAT+TGG + Chr4:56407544-56407563 MsG0480021298.01.T01:intron 10.0%
!!! AAATGATTTTTTTAACAAAA+TGG - Chr4:56406964-56406983 None:intergenic 10.0%
!!! CTTTAAAAAAAATAGATTTT+GGG - Chr4:56407169-56407188 None:intergenic 10.0%
!!! GTTTATAAAAAAATAGATTT+TGG - Chr4:56407024-56407043 None:intergenic 10.0%
!! ACAATTATAATCATAATCAT+AGG - Chr4:56407207-56407226 None:intergenic 15.0%
!! AGATATACTATTAATTACAA+AGG - Chr4:56406821-56406840 None:intergenic 15.0%
!! ATCTTTACAGAATTATTTAT+TGG + Chr4:56407478-56407497 MsG0480021298.01.T01:intron 15.0%
!! CAATTATAATCATAATCATA+GGG - Chr4:56407206-56407225 None:intergenic 15.0%
!! GATATACTATTAATTACAAA+GGG - Chr4:56406820-56406839 None:intergenic 15.0%
!!! GAGTTTTATTTTATATATAG+AGG - Chr4:56406059-56406078 None:intergenic 15.0%
!!! GCTTTAAAAAAAATAGATTT+TGG - Chr4:56407170-56407189 None:intergenic 15.0%
!!! TCTATTTTTTTATAAACACA+AGG + Chr4:56407027-56407046 MsG0480021298.01.T01:intron 15.0%
!! AACAACAATTTATAGATGTA+TGG + Chr4:56408378-56408397 MsG0480021298.01.T01:three_prime_UTR 20.0%
!! AACCTATTTAAACATAAGTT+TGG + Chr4:56406268-56406287 MsG0480021298.01.T01:CDS 20.0%
!! AATTAATAGTATATCTGCTA+AGG + Chr4:56406825-56406844 MsG0480021298.01.T01:intron 20.0%
!! ACCTATTTAAACATAAGTTT+GGG + Chr4:56406269-56406288 MsG0480021298.01.T01:CDS 20.0%
!! ATACAATATCTAATAGAGTT+TGG - Chr4:56407313-56407332 None:intergenic 20.0%
!! ATATGTTATCTAAATTGGTT+TGG + Chr4:56407549-56407568 MsG0480021298.01.T01:intron 20.0%
!! ATTAATTACAAAGGGAAAAT+AGG - Chr4:56406812-56406831 None:intergenic 20.0%
!! ATTGGATAATTAAAAACTCA+TGG + Chr4:56408090-56408109 MsG0480021298.01.T01:CDS 20.0%
!! TATCTGATATTAATCTTTCT+AGG + Chr4:56407257-56407276 MsG0480021298.01.T01:intron 20.0%
!! TTGGATAATTAAAAACTCAT+GGG + Chr4:56408091-56408110 MsG0480021298.01.T01:CDS 20.0%
!!! AAAACAAATTTTGATTGTGT+TGG + Chr4:56406632-56406651 MsG0480021298.01.T01:intron 20.0%
!!! AAACAAATTTTGATTGTGTT+GGG + Chr4:56406633-56406652 MsG0480021298.01.T01:intron 20.0%
!!! AAATGCTAACTTGTAATATT+TGG + Chr4:56407502-56407521 MsG0480021298.01.T01:intron 20.0%
!!! AATCTCTAAAAAAAAATCTC+TGG + Chr4:56407133-56407152 MsG0480021298.01.T01:intron 20.0%
!!! AATGCTAACTTGTAATATTT+GGG + Chr4:56407503-56407522 MsG0480021298.01.T01:intron 20.0%
!!! CTGTTGTTTATTTTATATTG+TGG + Chr4:56408251-56408270 MsG0480021298.01.T01:three_prime_UTR 20.0%
!!! GAGTTTTTAATTATCCAATA+TGG - Chr4:56408089-56408108 None:intergenic 20.0%
!!! TAAAAAATCTGAAACAAACA+GGG - Chr4:56406859-56406878 None:intergenic 20.0%
!!! TTAAAAAATCTGAAACAAAC+AGG - Chr4:56406860-56406879 None:intergenic 20.0%
!!! TTTGAGTACATTTTAAAATC+CGG + Chr4:56407658-56407677 MsG0480021298.01.T01:CDS 20.0%
! ACTCTATTAGATATTGTATG+AGG + Chr4:56407314-56407333 MsG0480021298.01.T01:intron 25.0%
! ATTTAAACATAAGTTTGGGA+AGG + Chr4:56406273-56406292 MsG0480021298.01.T01:CDS 25.0%
! CCACATTAAAATATGAATAC+TGG - Chr4:56408294-56408313 None:intergenic 25.0%
! GTATATATGCAAACATACAT+TGG + Chr4:56407960-56407979 MsG0480021298.01.T01:CDS 25.0%
! TCCCAAACTTATGTTTAAAT+AGG - Chr4:56406273-56406292 None:intergenic 25.0%
! TGGATAATTAAAAACTCATG+GGG + Chr4:56408092-56408111 MsG0480021298.01.T01:CDS 25.0%
! TTGCATATATACTGCATTTA+AGG - Chr4:56407952-56407971 None:intergenic 25.0%
!! AGCAAATTTGAAACATGATT+AGG + Chr4:56407410-56407429 MsG0480021298.01.T01:intron 25.0%
!! ATGCTAACTTGTAATATTTG+GGG + Chr4:56407504-56407523 MsG0480021298.01.T01:intron 25.0%
!!! CCAGTATTCATATTTTAATG+TGG + Chr4:56408291-56408310 MsG0480021298.01.T01:three_prime_UTR 25.0%
!!! TTATCTAAATTGGTTTGGAT+TGG + Chr4:56407554-56407573 MsG0480021298.01.T01:intron 25.0%
AGTTACTGCTGTTAAAAATC+AGG + Chr4:56406549-56406568 MsG0480021298.01.T01:CDS 30.0%
ATATATAGAGGTTGCAATTG+CGG - Chr4:56406047-56406066 None:intergenic 30.0%
ATGGATACTACAAAATATGC+AGG + Chr4:56408132-56408151 MsG0480021298.01.T01:CDS 30.0%
GTATATCTGCTAAGGAATTA+TGG + Chr4:56406833-56406852 MsG0480021298.01.T01:intron 30.0%
TATATGCAAACATACATTGG+AGG + Chr4:56407963-56407982 MsG0480021298.01.T01:CDS 30.0%
TGGATACTACAAAATATGCA+GGG + Chr4:56408133-56408152 MsG0480021298.01.T01:CDS 30.0%
! TGGAATAGCTTTTCATTTTG+AGG - Chr4:56406991-56407010 None:intergenic 30.0%
!! TAGATTTTGGAAAAGCTACT+TGG - Chr4:56407011-56407030 None:intergenic 30.0%
!!! AGTACATTTTAAAATCCGGT+GGG + Chr4:56407662-56407681 MsG0480021298.01.T01:CDS 30.0%
!!! TTCATATTTTAATGTGGTGC+TGG + Chr4:56408297-56408316 MsG0480021298.01.T01:three_prime_UTR 30.0%
AGATTATCTGTCGGAAGAAT+CGG - Chr4:56406496-56406515 None:intergenic 35.0%
AGTCTCTTTGAGCATATGTA+TGG - Chr4:56407999-56408018 None:intergenic 35.0%
ATTGTATGAGGTTCGACTTA+AGG + Chr4:56407326-56407345 MsG0480021298.01.T01:intron 35.0%
CTACTGAGTAGTAGTATGAA+CGG - Chr4:56408204-56408223 None:intergenic 35.0%
GAAGAAGACTATCCTTATTC+TGG + Chr4:56407694-56407713 MsG0480021298.01.T01:CDS 35.0%
GGATACTACAAAATATGCAG+GGG + Chr4:56408134-56408153 MsG0480021298.01.T01:CDS 35.0%
GGGTTTGTGATCATGAATTA+GGG + Chr4:56406653-56406672 MsG0480021298.01.T01:intron 35.0%
GTCTCTTTGAGCATATGTAT+GGG - Chr4:56407998-56408017 None:intergenic 35.0%
TCAATTGATGCTTCTTAGCA+CGG - Chr4:56406357-56406376 None:intergenic 35.0%
TGAATACTGGCAACAATTCA+TGG - Chr4:56408281-56408300 None:intergenic 35.0%
TGGAAAATCGCAGAATAGAA+TGG - Chr4:56406092-56406111 None:intergenic 35.0%
TGGGTTTGTGATCATGAATT+AGG + Chr4:56406652-56406671 MsG0480021298.01.T01:intron 35.0%
! TTTTCCATATCCTCAAGTCA+TGG + Chr4:56406105-56406124 MsG0480021298.01.T01:intron 35.0%
!! TGCTAAGAAGCATCAATTGA+TGG + Chr4:56406357-56406376 MsG0480021298.01.T01:CDS 35.0%
!!! GAGTACATTTTAAAATCCGG+TGG + Chr4:56407661-56407680 MsG0480021298.01.T01:CDS 35.0%
!!! GATTTTGATTGGAGAGAGAA+AGG + Chr4:56406523-56406542 MsG0480021298.01.T01:CDS 35.0%
!!! GTACATTTTAAAATCCGGTG+GGG + Chr4:56407663-56407682 MsG0480021298.01.T01:CDS 35.0%
ACCGTTCTTGACAAGATTAG+CGG - Chr4:56407812-56407831 None:intergenic 40.0%
AGAAGATCCAATAATCCGTC+AGG + Chr4:56406201-56406220 MsG0480021298.01.T01:CDS 40.0%
ATTATCTGTCGGAAGAATCG+GGG - Chr4:56406494-56406513 None:intergenic 40.0%
CCAAGGATGAACATGATTAC+AGG + Chr4:56406305-56406324 MsG0480021298.01.T01:CDS 40.0%
CCTGTAATCATGTTCATCCT+TGG - Chr4:56406308-56406327 None:intergenic 40.0%
CTATTCGCCTATTAGGATGA+AGG + Chr4:56408058-56408077 MsG0480021298.01.T01:CDS 40.0%
CTTCATCCTAATAGGCGAAT+AGG - Chr4:56408060-56408079 None:intergenic 40.0%
CTTTAGCACTTACTAGCAAG+AGG - Chr4:56407835-56407854 None:intergenic 40.0%
GATTATCTGTCGGAAGAATC+GGG - Chr4:56406495-56406514 None:intergenic 40.0%
TCGCAGAATAGAATGGAAAG+TGG - Chr4:56406085-56406104 None:intergenic 40.0%
TCTCTCCAATCAAAATCCTC+CGG - Chr4:56406520-56406539 None:intergenic 40.0%
TCTTCCGACAGATAATCTTC+CGG + Chr4:56406498-56406517 MsG0480021298.01.T01:CDS 40.0%
TGATCCATGACTTGAGGATA+TGG - Chr4:56406112-56406131 None:intergenic 40.0%
TGCTCAAAGAGACTAGATCA+TGG + Chr4:56408005-56408024 MsG0480021298.01.T01:CDS 40.0%
TGGGAAGGTTTATTCTTCCA+AGG + Chr4:56406288-56406307 MsG0480021298.01.T01:CDS 40.0%
TGTTGGAGTTTCAGTACAAC+CGG + Chr4:56406689-56406708 MsG0480021298.01.T01:CDS 40.0%
! ACTAGATCATGGAGTGTTAC+TGG + Chr4:56408016-56408035 MsG0480021298.01.T01:CDS 40.0%
! ACTTGTCGATTGTGATCATG+AGG + Chr4:56406772-56406791 MsG0480021298.01.T01:CDS 40.0%
! GCATCAATTGATGGATCCTT+CGG + Chr4:56406366-56406385 MsG0480021298.01.T01:CDS 40.0%
! GCTAAGACTGACAAGTTTTC+CGG - Chr4:56406744-56406763 None:intergenic 40.0%
! TCTTTTCATCTTCTCCGTCT+CGG + Chr4:56406156-56406175 MsG0480021298.01.T01:CDS 40.0%
!! ATCTTCCGGAGGATTTTGAT+TGG + Chr4:56406512-56406531 MsG0480021298.01.T01:CDS 40.0%
AAAACTCATGGGGTGAGACT+TGG + Chr4:56408102-56408121 MsG0480021298.01.T01:CDS 45.0%
AAACTCATGGGGTGAGACTT+GGG + Chr4:56408103-56408122 MsG0480021298.01.T01:CDS 45.0%
AAACTCCCTCGGAGTAAGAT+CGG - Chr4:56406416-56406435 None:intergenic 45.0%
AATTCTCCGATCTTACTCCG+AGG + Chr4:56406407-56406426 MsG0480021298.01.T01:CDS 45.0%
AGATCCAATAATCCGTCAGG+TGG + Chr4:56406204-56406223 MsG0480021298.01.T01:CDS 45.0%
ATAGTGTGATCCAGAGCAAC+CGG + Chr4:56407591-56407610 MsG0480021298.01.T01:intron 45.0%
ATCATGAATTAGGGCTCGTG+TGG + Chr4:56406662-56406681 MsG0480021298.01.T01:intron 45.0%
ATTCTCCGATCTTACTCCGA+GGG + Chr4:56406408-56406427 MsG0480021298.01.T01:CDS 45.0%
ATTGGATCTTCTCCTTCGTC+CGG - Chr4:56406193-56406212 None:intergenic 45.0%
CCACGATCAGTACCAGAATA+AGG - Chr4:56407709-56407728 None:intergenic 45.0%
GCCGCTAATCTTGTCAAGAA+CGG + Chr4:56407808-56407827 MsG0480021298.01.T01:CDS 45.0%
GGATGAAGGAGAAGCCATAT+TGG + Chr4:56408072-56408091 MsG0480021298.01.T01:CDS 45.0%
GGCTTCTCCTTCATCCTAAT+AGG - Chr4:56408068-56408087 None:intergenic 45.0%
GGTTGTACTGAAACTCCAAC+AGG - Chr4:56406690-56406709 None:intergenic 45.0%
TCCTCCGGAAGATTATCTGT+CGG - Chr4:56406505-56406524 None:intergenic 45.0%
TGACAAGATTAGCGGCAATC+TGG - Chr4:56407804-56407823 None:intergenic 45.0%
TGCAGGGGACGAAATATATG+CGG + Chr4:56408149-56408168 MsG0480021298.01.T01:CDS 45.0%
TTACTGGTGGGATATGGATC+TGG + Chr4:56408032-56408051 MsG0480021298.01.T01:CDS 45.0%
! AGATCATGGAGTGTTACTGG+TGG + Chr4:56408019-56408038 MsG0480021298.01.T01:CDS 45.0%
! GATCATGGAGTGTTACTGGT+GGG + Chr4:56408020-56408039 MsG0480021298.01.T01:CDS 45.0%
! TCAATTGATGGATCCTTCGG+CGG + Chr4:56406369-56406388 MsG0480021298.01.T01:CDS 45.0%
!! CCTTATTCTGGTACTGATCG+TGG + Chr4:56407706-56407725 MsG0480021298.01.T01:CDS 45.0%
!! GAGTTTCGTCAGAGCGTTTT+GGG + Chr4:56406430-56406449 MsG0480021298.01.T01:CDS 45.0%
!!! AGAGCGTTTTGGGATTGAGA+GGG + Chr4:56406440-56406459 MsG0480021298.01.T01:CDS 45.0%
AACTCATGGGGTGAGACTTG+GGG + Chr4:56408104-56408123 MsG0480021298.01.T01:CDS 50.0%
AGTACAACCGGTGCACTTGA+AGG + Chr4:56406701-56406720 MsG0480021298.01.T01:CDS 50.0%
CTGGAGCCTATTCGCCTATT+AGG + Chr4:56408051-56408070 MsG0480021298.01.T01:CDS 50.0%
GGACTCCATGGTTTCTACTG+TGG + Chr4:56408175-56408194 MsG0480021298.01.T01:CDS 50.0%
GGGACGAAATATATGCGGAG+TGG + Chr4:56408154-56408173 MsG0480021298.01.T01:CDS 50.0%
GGGGCTGCATTTGCATCTTT+CGG - Chr4:56406475-56406494 None:intergenic 50.0%
GGTGAGACTTGGGGAGAAAA+TGG + Chr4:56408113-56408132 MsG0480021298.01.T01:CDS 50.0%
GTGCGATGATCCATGACTTG+AGG - Chr4:56406118-56406137 None:intergenic 50.0%
TAGTGTGATCCAGAGCAACC+GGG + Chr4:56407592-56407611 MsG0480021298.01.T01:intron 50.0%
TCCGACAGATAATCTTCCGG+AGG + Chr4:56406501-56406520 MsG0480021298.01.T01:CDS 50.0%
TCTCTGCAGTTGCACATCGA+TGG + Chr4:56407351-56407370 MsG0480021298.01.T01:intron 50.0%
! GCACATCGATGGTGACTTGT+AGG + Chr4:56407362-56407381 MsG0480021298.01.T01:intron 50.0%
! GGAGTGTTACTGGTGGGATA+TGG + Chr4:56408026-56408045 MsG0480021298.01.T01:CDS 50.0%
! TATATGCGGAGTGGACTCCA+TGG + Chr4:56408163-56408182 MsG0480021298.01.T01:CDS 50.0%
!! GGAGTTTCGTCAGAGCGTTT+TGG + Chr4:56406429-56406448 MsG0480021298.01.T01:CDS 50.0%
!! TCGACCACCTGACGGATTAT+TGG - Chr4:56406211-56406230 None:intergenic 50.0%
!!! CAGAGCGTTTTGGGATTGAG+AGG + Chr4:56406439-56406458 MsG0480021298.01.T01:CDS 50.0%
!!! GAGCGTTTTGGGATTGAGAG+GGG + Chr4:56406441-56406460 MsG0480021298.01.T01:CDS 50.0%
!!! GTTTTGGGATTGAGAGGGGT+GGG + Chr4:56406445-56406464 MsG0480021298.01.T01:CDS 50.0%
!!! TTTTGGGATTGAGAGGGGTG+GGG + Chr4:56406446-56406465 MsG0480021298.01.T01:CDS 50.0%
AACCGGGTTCTTGTGATGCC+GGG + Chr4:56407608-56407627 MsG0480021298.01.T01:CDS 55.0%
ACGCTCTGACGAAACTCCCT+CGG - Chr4:56406427-56406446 None:intergenic 55.0%
ATGGATCCTTCGGCGGTTCA+CGG + Chr4:56406376-56406395 MsG0480021298.01.T01:CDS 55.0%
CAACCGGGTTCTTGTGATGC+CGG + Chr4:56407607-56407626 MsG0480021298.01.T01:CDS 55.0%
CATCAGACCACCATTGCACC+CGG - Chr4:56407629-56407648 None:intergenic 55.0%
CTTCTTCGTCGACCACCTGA+CGG - Chr4:56406219-56406238 None:intergenic 55.0%
GGCAGCCACAGTAGAAACCA+TGG - Chr4:56408183-56408202 None:intergenic 55.0%
GGTGCTCACTTTCTCTCGAC+CGG + Chr4:56406722-56406741 MsG0480021298.01.T01:CDS 55.0%
GTGAGCACCTTCAAGTGCAC+CGG - Chr4:56406711-56406730 None:intergenic 55.0%
TCACAAGAACCCGGTTGCTC+TGG - Chr4:56407604-56407623 None:intergenic 55.0%
TCTTGTGATGCCGGGTGCAA+TGG + Chr4:56407616-56407635 MsG0480021298.01.T01:CDS 55.0%
TGGTCGACGAAGAAGGAGTG+CGG + Chr4:56406224-56406243 MsG0480021298.01.T01:CDS 55.0%
! GACGAAGAAGGAGTGCGGTT+GGG + Chr4:56406229-56406248 MsG0480021298.01.T01:CDS 55.0%
!!! CGTTTTGGGATTGAGAGGGG+TGG + Chr4:56406444-56406463 MsG0480021298.01.T01:CDS 55.0%
AGGGCTCGTGTGGATCCTGT+TGG + Chr4:56406672-56406691 MsG0480021298.01.T01:intron 60.0%
CACCCGGCATCACAAGAACC+CGG - Chr4:56407613-56407632 None:intergenic 60.0%
CGGCGTAGAGAATGCCGAGA+CGG - Chr4:56406173-56406192 None:intergenic 60.0%
CGTCAGGTGGTCGACGAAGA+AGG + Chr4:56406217-56406236 MsG0480021298.01.T01:CDS 60.0%
CGTCTCGGCATTCTCTACGC+CGG + Chr4:56406171-56406190 MsG0480021298.01.T01:CDS 60.0%
GCATTCTCTACGCCGGACGA+AGG + Chr4:56406178-56406197 MsG0480021298.01.T01:CDS 60.0%
GTAACACCGTGAACCGCCGA+AGG - Chr4:56406385-56406404 None:intergenic 60.0%
TGTGATGCCGGGTGCAATGG+TGG + Chr4:56407619-56407638 MsG0480021298.01.T01:CDS 60.0%
TTCTTCGCGCATCACCCCAC+CGG - Chr4:56407680-56407699 None:intergenic 60.0%
! CGACGAAGAAGGAGTGCGGT+TGG + Chr4:56406228-56406247 MsG0480021298.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56406043 56408443 56406043 ID=MsG0480021298.01;Name=MsG0480021298.01
Chr4 mRNA 56406043 56408443 56406043 ID=MsG0480021298.01.T01;Parent=MsG0480021298.01;Name=MsG0480021298.01.T01;_AED=0.23;_eAED=0.23;_QI=81|1|1|1|0.75|0.6|5|190|363
Chr4 exon 56407946 56408333 56407946 ID=MsG0480021298.01.T01:exon:6944;Parent=MsG0480021298.01.T01
Chr4 exon 56408364 56408443 56408364 ID=MsG0480021298.01.T01:exon:6945;Parent=MsG0480021298.01.T01
Chr4 five_prime_UTR 56406043 56406123 56406043 ID=MsG0480021298.01.T01:five_prime_utr;Parent=MsG0480021298.01.T01
Chr4 CDS 56406124 56406570 56406124 ID=MsG0480021298.01.T01:cds;Parent=MsG0480021298.01.T01
Chr4 CDS 56406674 56406793 56406674 ID=MsG0480021298.01.T01:cds;Parent=MsG0480021298.01.T01
Chr4 CDS 56407595 56407841 56407595 ID=MsG0480021298.01.T01:cds;Parent=MsG0480021298.01.T01
Chr4 CDS 56407946 56408223 56407946 ID=MsG0480021298.01.T01:cds;Parent=MsG0480021298.01.T01
Chr4 three_prime_UTR 56408224 56408333 56408224 ID=MsG0480021298.01.T01:three_prime_utr;Parent=MsG0480021298.01.T01
Chr4 three_prime_UTR 56408364 56408443 56408364 ID=MsG0480021298.01.T01:three_prime_utr;Parent=MsG0480021298.01.T01
Chr4 mRNA 56406043 56408442 56406043 ID=MsG0480021298.01.T02;Parent=MsG0480021298.01;Name=MsG0480021298.01.T02;_AED=0.22;_eAED=0.22;_QI=81|1|1|1|1|1|4|219|363
Chr4 exon 56407946 56408442 56407946 ID=MsG0480021298.01.T02:exon:6946;Parent=MsG0480021298.01.T02
Chr4 five_prime_UTR 56406043 56406123 56406043 ID=MsG0480021298.01.T02:five_prime_utr;Parent=MsG0480021298.01.T02
Chr4 CDS 56406124 56406570 56406124 ID=MsG0480021298.01.T02:cds;Parent=MsG0480021298.01.T02
Chr4 CDS 56406674 56406793 56406674 ID=MsG0480021298.01.T02:cds;Parent=MsG0480021298.01.T02
Chr4 CDS 56407595 56407841 56407595 ID=MsG0480021298.01.T02:cds;Parent=MsG0480021298.01.T02
Chr4 CDS 56407946 56408223 56407946 ID=MsG0480021298.01.T02:cds;Parent=MsG0480021298.01.T02
Chr4 three_prime_UTR 56408224 56408442 56408224 ID=MsG0480021298.01.T02:three_prime_utr;Parent=MsG0480021298.01.T02
Gene Sequence

>MsG0480021298.01.T02

ATGGATCATCGCACTCTTCTTCTCTTCGTCGTTCTTTTCATCTTCTCCGTCTCGGCATTCTCTACGCCGGACGAAGGAGAAGATCCAATAATCCGTCAGGTGGTCGACGAAGAAGGAGTGCGGTTGGGAGCAGAGCATCACTTTAACCTATTTAAACATAAGTTTGGGAAGGTTTATTCTTCCAAGGATGAACATGATTACAGGTTTAAAATCTTCAAGTCTAATCTGAACCGTGCTAAGAAGCATCAATTGATGGATCCTTCGGCGGTTCACGGTGTTACGAAATTCTCCGATCTTACTCCGAGGGAGTTTCGTCAGAGCGTTTTGGGATTGAGAGGGGTGGGGTTGCCGAAAGATGCAAATGCAGCCCCGATTCTTCCGACAGATAATCTTCCGGAGGATTTTGATTGGAGAGAGAAAGGAGCAGTTACTGCTGTTAAAAATCAGGGCTCGTGTGGATCCTGTTGGAGTTTCAGTACAACCGGTGCACTTGAAGGTGCTCACTTTCTCTCGACCGGAAAACTTGTCAGTCTTAGCGAGCAACAACTTGTCGATTGTGATCATGAGTGTGATCCAGAGCAACCGGGTTCTTGTGATGCCGGGTGCAATGGTGGTCTGATGAATAGTGCTTTTGAGTACATTTTAAAATCCGGTGGGGTGATGCGCGAAGAAGACTATCCTTATTCTGGTACTGATCGTGGAGCATGCAAGTTTGACAAGAAAAAAATTGCAGCATCAGTTGCAAATTTCAGCGTTGTTTCACTTGATGAAGACCAGATTGCCGCTAATCTTGTCAAGAACGGTCCTCTTGCTATTGCCTTAAATGCAGTATATATGCAAACATACATTGGAGGAGTATCATGCCCATACATATGCTCAAAGAGACTAGATCATGGAGTGTTACTGGTGGGATATGGATCTGGAGCCTATTCGCCTATTAGGATGAAGGAGAAGCCATATTGGATAATTAAAAACTCATGGGGTGAGACTTGGGGAGAAAATGGATACTACAAAATATGCAGGGGACGAAATATATGCGGAGTGGACTCCATGGTTTCTACTGTGGCTGCCGTTCATACTACTACTCAGTAG

>MsG0480021298.01.T01

ATGGATCATCGCACTCTTCTTCTCTTCGTCGTTCTTTTCATCTTCTCCGTCTCGGCATTCTCTACGCCGGACGAAGGAGAAGATCCAATAATCCGTCAGGTGGTCGACGAAGAAGGAGTGCGGTTGGGAGCAGAGCATCACTTTAACCTATTTAAACATAAGTTTGGGAAGGTTTATTCTTCCAAGGATGAACATGATTACAGGTTTAAAATCTTCAAGTCTAATCTGAACCGTGCTAAGAAGCATCAATTGATGGATCCTTCGGCGGTTCACGGTGTTACGAAATTCTCCGATCTTACTCCGAGGGAGTTTCGTCAGAGCGTTTTGGGATTGAGAGGGGTGGGGTTGCCGAAAGATGCAAATGCAGCCCCGATTCTTCCGACAGATAATCTTCCGGAGGATTTTGATTGGAGAGAGAAAGGAGCAGTTACTGCTGTTAAAAATCAGGGCTCGTGTGGATCCTGTTGGAGTTTCAGTACAACCGGTGCACTTGAAGGTGCTCACTTTCTCTCGACCGGAAAACTTGTCAGTCTTAGCGAGCAACAACTTGTCGATTGTGATCATGAGTGTGATCCAGAGCAACCGGGTTCTTGTGATGCCGGGTGCAATGGTGGTCTGATGAATAGTGCTTTTGAGTACATTTTAAAATCCGGTGGGGTGATGCGCGAAGAAGACTATCCTTATTCTGGTACTGATCGTGGAGCATGCAAGTTTGACAAGAAAAAAATTGCAGCATCAGTTGCAAATTTCAGCGTTGTTTCACTTGATGAAGACCAGATTGCCGCTAATCTTGTCAAGAACGGTCCTCTTGCTATTGCCTTAAATGCAGTATATATGCAAACATACATTGGAGGAGTATCATGCCCATACATATGCTCAAAGAGACTAGATCATGGAGTGTTACTGGTGGGATATGGATCTGGAGCCTATTCGCCTATTAGGATGAAGGAGAAGCCATATTGGATAATTAAAAACTCATGGGGTGAGACTTGGGGAGAAAATGGATACTACAAAATATGCAGGGGACGAAATATATGCGGAGTGGACTCCATGGTTTCTACTGTGGCTGCCGTTCATACTACTACTCAGTAG

Protein sequence

>MsG0480021298.01.T02

MDHRTLLLFVVLFIFSVSAFSTPDEGEDPIIRQVVDEEGVRLGAEHHFNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKKHQLMDPSAVHGVTKFSDLTPREFRQSVLGLRGVGLPKDANAAPILPTDNLPEDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRGACKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYIGGVSCPYICSKRLDHGVLLVGYGSGAYSPIRMKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMVSTVAAVHTTTQ*

>MsG0480021298.01.T01

MDHRTLLLFVVLFIFSVSAFSTPDEGEDPIIRQVVDEEGVRLGAEHHFNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKKHQLMDPSAVHGVTKFSDLTPREFRQSVLGLRGVGLPKDANAAPILPTDNLPEDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRGACKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYIGGVSCPYICSKRLDHGVLLVGYGSGAYSPIRMKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMVSTVAAVHTTTQ*