AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046226.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046226.01.T01 MTR_4g103540 97.644 679 14 1 1 677 15 693 0.0 1359
MsG0880046226.01.T01 MTR_8g021330 40.510 627 322 15 82 676 9 616 2.47e-140 424
MsG0880046226.01.T01 MTR_7g013770 44.404 545 270 11 146 674 150 677 1.58e-139 424
MsG0880046226.01.T01 MTR_5g073450 33.886 664 391 11 17 665 4 634 4.93e-121 375
MsG0880046226.01.T01 MTR_3g025900 38.732 568 313 12 116 675 79 619 6.02e-120 371
MsG0880046226.01.T01 MTR_1g090620 32.738 672 392 12 17 664 6 641 4.61e-119 370
MsG0880046226.01.T01 MTR_1g057560 34.419 645 372 12 32 664 20 625 1.50e-116 363
MsG0880046226.01.T01 MTR_3g031130 34.545 660 378 14 17 665 4 620 2.84e-115 359
MsG0880046226.01.T01 MTR_6g033310 36.000 550 315 10 139 676 213 737 6.20e-106 338
MsG0880046226.01.T01 MTR_7g026630 36.531 542 306 13 144 671 137 654 6.23e-105 333
MsG0880046226.01.T01 MTR_5g073460 38.914 442 262 4 229 665 255 693 5.28e-98 316
MsG0880046226.01.T01 MTR_1g117090 33.110 598 331 12 111 665 98 669 3.60e-96 311
MsG0880046226.01.T01 MTR_2g096230 31.743 608 353 14 71 668 30 585 5.98e-87 284
MsG0880046226.01.T01 MTR_4g062330 33.034 557 325 13 116 658 76 598 1.34e-82 274
MsG0880046226.01.T01 MTR_1g067480 29.883 599 364 16 81 662 41 600 2.15e-76 256
MsG0880046226.01.T01 MTR_1g067460 30.033 606 355 16 81 662 39 599 1.33e-69 238
MsG0880046226.01.T01 MTR_5g073480 30.645 434 233 8 229 658 256 625 2.29e-54 197
MsG0880046226.01.T01 MTR_5g073620 31.176 340 207 4 220 554 275 592 6.40e-51 191
MsG0880046226.01.T01 MTR_5g073620 35.429 175 112 1 491 665 896 1069 2.43e-20 96.7
MsG0880046226.01.T01 MTR_5g074130 29.954 434 281 10 237 662 255 673 1.07e-47 180
MsG0880046226.01.T01 MTR_5g073920 27.540 443 291 8 229 665 242 660 2.12e-41 161
MsG0880046226.01.T01 MTR_1g009620 28.256 453 281 14 237 667 226 656 2.02e-37 149
MsG0880046226.01.T01 MTR_3g464010 28.009 432 277 11 242 662 258 666 4.94e-37 147
MsG0880046226.01.T01 MTR_5g073900 26.276 392 230 10 250 632 1 342 3.52e-34 134
MsG0880046226.01.T01 MTR_1g017910 26.485 404 271 11 259 641 267 665 6.24e-33 135
MsG0880046226.01.T01 MTR_5g073770 32.653 196 126 3 220 410 188 382 5.99e-30 122
MsG0880046226.01.T01 MTR_5g093530 26.462 359 228 7 306 662 246 570 1.05e-26 115
MsG0880046226.01.T01 MTR_4g008260 24.945 453 304 14 233 671 216 646 2.03e-25 112
MsG0880046226.01.T01 MTR_0229s0040 33.684 190 119 3 483 667 24 211 1.27e-24 103
MsG0880046226.01.T01 MTR_5g073490 33.951 162 89 4 504 663 8 153 4.28e-21 90.9
MsG0880046226.01.T01 MTR_5g073780 34.286 175 114 1 491 665 51 224 6.12e-21 92.4
MsG0880046226.01.T01 MTR_5g073960 28.415 183 117 4 229 408 247 418 1.95e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046226.01.T01 AT5G50380 57.833 683 239 11 20 676 24 683 0.0 733
MsG0880046226.01.T01 AT1G72470 40.510 627 324 12 82 676 23 632 1.02e-147 444
MsG0880046226.01.T01 AT3G14090 39.647 623 353 11 72 675 5 623 3.38e-140 424
MsG0880046226.01.T01 AT1G54090 45.275 455 233 8 232 674 170 620 6.30e-131 400
MsG0880046226.01.T01 AT3G29400 38.487 595 300 10 115 675 96 658 8.98e-120 372
MsG0880046226.01.T01 AT5G58430 34.071 678 354 15 18 665 5 619 8.84e-117 363
MsG0880046226.01.T01 AT5G52340 33.591 646 376 14 31 664 19 623 1.24e-115 360
MsG0880046226.01.T01 AT5G03540 33.487 651 375 13 32 664 20 630 3.95e-113 354
MsG0880046226.01.T01 AT5G03540 32.887 672 377 16 32 664 20 656 1.68e-108 343
MsG0880046226.01.T01 AT5G13150 36.891 534 308 10 147 669 134 649 1.07e-107 340
MsG0880046226.01.T01 AT5G03540 35.714 546 300 10 137 664 3 515 5.18e-107 335
MsG0880046226.01.T01 AT5G61010 32.030 665 393 14 16 667 11 629 6.76e-99 317
MsG0880046226.01.T01 AT5G61010 32.030 665 393 14 16 667 11 629 6.76e-99 317
MsG0880046226.01.T01 AT1G07000 31.071 663 374 16 17 665 4 597 1.21e-92 300
MsG0880046226.01.T01 AT5G13990 35.150 532 311 11 146 667 177 684 3.85e-90 295
MsG0880046226.01.T01 AT2G28640 32.892 529 302 10 147 665 94 579 1.84e-87 286
MsG0880046226.01.T01 AT5G52350 33.830 470 282 8 203 664 129 577 1.96e-84 277
MsG0880046226.01.T01 AT5G59730 35.660 530 306 12 150 665 91 599 3.78e-81 270
MsG0880046226.01.T01 AT5G59730 35.660 530 306 12 150 665 91 599 5.51e-81 270
MsG0880046226.01.T01 AT1G07725 31.132 530 319 9 147 664 96 591 4.01e-79 264
MsG0880046226.01.T01 AT2G39380 30.490 551 340 12 129 666 92 612 1.35e-73 250
MsG0880046226.01.T01 AT3G09520 29.575 541 319 14 147 662 101 604 2.79e-70 241
MsG0880046226.01.T01 AT3G09530 31.481 540 315 14 147 664 96 602 3.91e-69 238
MsG0880046226.01.T01 AT3G55150 29.268 533 340 10 147 666 104 612 3.32e-64 224
MsG0880046226.01.T01 AT2G28650 33.882 425 254 8 243 662 152 554 6.02e-63 219
MsG0880046226.01.T01 AT4G31540 26.477 457 307 14 225 666 216 658 2.10e-35 143
MsG0880046226.01.T01 AT1G51640 26.126 444 289 14 243 663 199 626 1.36e-26 115

Find 186 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGTTATAACCGGCTTTC+TGG 0.087033 8:-70785069 None:intergenic
GGTTGAGTGTTTGGCAATTC+TGG 0.129191 8:+70784617 MsG0880046226.01.T01:CDS
GGAGAAGCTGTTTAGGATTT+TGG 0.131734 8:+70784890 MsG0880046226.01.T01:CDS
CTCAGATCTTATAGAGGTTT+TGG 0.163380 8:+70785388 MsG0880046226.01.T01:CDS
CATGTCTTCACGATCTTCTT+TGG 0.189109 8:-70783911 None:intergenic
TTCAAATTCAAAATTGATTC+AGG 0.215721 8:-70784513 None:intergenic
ACCTGCATACCGCTCGTTTA+TGG 0.216171 8:+70785676 MsG0880046226.01.T01:CDS
CGATGCTATGGATTCGCTTT+TGG 0.220306 8:+70785151 MsG0880046226.01.T01:CDS
TATAATCCGCAAGCAGTTTC+AGG 0.258964 8:-70785127 None:intergenic
GTTATGATGTTGTTGAATTT+TGG 0.284340 8:+70784837 MsG0880046226.01.T01:CDS
GGTGGGTTTGATGATAATTC+TGG 0.285342 8:+70784399 MsG0880046226.01.T01:CDS
CACGGCGGCGGCGGAGCCAC+CGG 0.302418 8:+70783826 MsG0880046226.01.T01:CDS
GAGAGATGCTTTGCCTGAAT+TGG 0.303022 8:+70784929 MsG0880046226.01.T01:CDS
TCCAGAAAGCCGGTTATAAC+TGG 0.303990 8:+70785068 MsG0880046226.01.T01:CDS
TGATGATTTATTTGTTGATT+TGG 0.313785 8:+70784485 MsG0880046226.01.T01:CDS
GGCGGCGGAGCCACCGGCGC+TGG 0.314460 8:+70783832 MsG0880046226.01.T01:CDS
GATGATAATTCTGGGAGTTT+TGG 0.322543 8:+70784408 MsG0880046226.01.T01:CDS
TTTGCCTGAATTGGAGGATA+TGG 0.324739 8:+70784938 MsG0880046226.01.T01:CDS
GTCGTCGGATTTGGAAGATT+TGG 0.333151 8:-70784001 None:intergenic
GTCGACGTCGTCGTCGGATT+TGG 0.334534 8:-70784010 None:intergenic
AAGCTGTTAAGGTCGTTGTT+AGG 0.336199 8:+70784718 MsG0880046226.01.T01:CDS
CCTGCATACCGCTCGTTTAT+GGG 0.339799 8:+70785677 MsG0880046226.01.T01:CDS
ATGTCTTCACGATCTTCTTT+GGG 0.340161 8:-70783910 None:intergenic
CCTTGCTCCAACAGGCTCTA+AGG 0.347147 8:-70785466 None:intergenic
GAGGGGACAAAGCTTCTAAC+TGG 0.348022 8:-70785229 None:intergenic
GAAGTTTGAGTGGAAGAGTT+TGG 0.356231 8:+70784671 MsG0880046226.01.T01:CDS
TTGGCTTGTTTGAGGGATGA+AGG 0.360266 8:+70785491 MsG0880046226.01.T01:CDS
AGCCTGTTGGAGCAAGGCCT+TGG 0.361426 8:+70785472 MsG0880046226.01.T01:CDS
GTTGAGTGTTTGGCAATTCT+GGG 0.364660 8:+70784618 MsG0880046226.01.T01:CDS
GGTCGCCGGAGAAGCTGTTT+AGG 0.371076 8:+70784883 MsG0880046226.01.T01:CDS
TTTGGTGATGTGGGTGATCC+TGG 0.375875 8:+70784426 MsG0880046226.01.T01:CDS
TGACGCGTTGGTTGAGTGTT+TGG 0.383090 8:+70784608 MsG0880046226.01.T01:CDS
ATATGAGAGGGAGTGTTTGC+AGG 0.388456 8:+70784566 MsG0880046226.01.T01:CDS
GCAAGGCCTTGGCTTGTTTG+AGG 0.389482 8:+70785483 MsG0880046226.01.T01:CDS
AAGGGTGTGCTTAGAGGACT+TGG 0.391145 8:+70784990 MsG0880046226.01.T01:CDS
TATTTATTAGATTTATTTGA+AGG 0.391983 8:+70785773 MsG0880046226.01.T01:CDS
CAAGGCCTTGGCTTGTTTGA+GGG 0.393731 8:+70785484 MsG0880046226.01.T01:CDS
ACGATCCAATATAATCTTAC+CGG 0.397560 8:-70784229 None:intergenic
TGGATGAGAGGATGAAGAAT+TGG 0.402092 8:+70784691 MsG0880046226.01.T01:CDS
AGCCAAGGCCTTGCTCCAAC+AGG 0.402360 8:-70785474 None:intergenic
CTGAGTTTGAGAGTTGTATT+CGG 0.403325 8:+70785036 MsG0880046226.01.T01:CDS
GAGGCGAAGGGTGTGCTTAG+AGG 0.408805 8:+70784984 MsG0880046226.01.T01:CDS
GCCGCCGTGGTTGGTGGTGG+TGG 0.410894 8:-70783812 None:intergenic
GGGGAGGTTTAGCGGTCAGC+TGG 0.411054 8:+70785697 MsG0880046226.01.T01:CDS
TTGGTGGTGGTGGCGGCCAT+AGG 0.411564 8:-70783802 None:intergenic
TTAGCCGGTGTAGTACTAAT+AGG 0.412771 8:+70784340 MsG0880046226.01.T01:CDS
TGTTTGAGGGATGAAGGGGT+TGG 0.413469 8:+70785497 MsG0880046226.01.T01:CDS
GGTTCGTAAGCGCCGCGGTC+AGG 0.413882 8:+70785421 MsG0880046226.01.T01:CDS
TGGAATCGTCGCCGTTGATA+AGG 0.413973 8:-70783981 None:intergenic
GTAACCATATCCTCCAATTC+AGG 0.417224 8:-70784942 None:intergenic
TGGGTGATCCTGGTTCTCAT+AGG 0.419887 8:+70784436 MsG0880046226.01.T01:CDS
GAATTGGGTGCAAGCTGTTA+AGG 0.422274 8:+70784707 MsG0880046226.01.T01:CDS
TGCATCAAGGATGGCTTTGA+AGG 0.425408 8:+70785535 MsG0880046226.01.T01:CDS
GGCGGAGCCACCGGCGCTGG+CGG 0.429239 8:+70783835 MsG0880046226.01.T01:CDS
CGGTGGCTCCGCCGCCGCCG+TGG 0.432103 8:-70783825 None:intergenic
AGCTGTTAAGGTCGTTGTTA+GGG 0.435827 8:+70784719 MsG0880046226.01.T01:CDS
TTCGCATCTCTTCACGAAGC+TGG 0.437799 8:-70785631 None:intergenic
GTTGATAAGGTCGGTGATAC+CGG 0.445597 8:-70783968 None:intergenic
GGCTCCGCCGCCGCCGTGGT+TGG 0.450387 8:-70783821 None:intergenic
ATATTATTGATCGGATGGTT+AGG 0.455899 8:+70784538 MsG0880046226.01.T01:CDS
ACCTTCGACAACCGTCTCTC+CGG 0.457479 8:+70783949 MsG0880046226.01.T01:CDS
TTCAGTTCGCAGGACGGTGC+CGG 0.459367 8:+70784378 MsG0880046226.01.T01:CDS
CTTTCTCCGCAGCTTCGAAT+CGG 0.459685 8:-70784044 None:intergenic
CCCATAAACGAGCGGTATGC+AGG 0.460205 8:-70785677 None:intergenic
ACAGCGTTGAAATAGACTTC+AGG 0.460769 8:-70784141 None:intergenic
AAGCAGTTGCCATTTGTAAG+AGG 0.461420 8:+70784862 MsG0880046226.01.T01:CDS
TGGCTTGTTTGAGGGATGAA+GGG 0.462221 8:+70785492 MsG0880046226.01.T01:CDS
CGAGCCTCGACATGGCAACT+TGG 0.462336 8:-70784266 None:intergenic
ACCACCACCAACCACGGCGG+CGG 0.465623 8:+70783814 MsG0880046226.01.T01:CDS
AAATAGACTTCAGGATCATT+CGG 0.468898 8:-70784132 None:intergenic
GTGGGTTTGATGATAATTCT+GGG 0.470117 8:+70784400 MsG0880046226.01.T01:CDS
CAGCTGGAGGGAAGACATGC+AGG 0.472085 8:+70785713 MsG0880046226.01.T01:CDS
TTGAGGGATGAAGGGGTTGG+AGG 0.475164 8:+70785500 MsG0880046226.01.T01:CDS
ACCACCAACCACGGCGGCGG+CGG 0.479449 8:+70783817 MsG0880046226.01.T01:CDS
TTCGATGTCTTTCAGTTCGC+AGG 0.481567 8:+70784368 MsG0880046226.01.T01:CDS
TCTTCACGAAGCTGGTCATC+GGG 0.481866 8:-70785623 None:intergenic
CTGCTGTATTACATCACATA+AGG 0.483360 8:+70785801 MsG0880046226.01.T01:CDS
AACAATATCTGTCGTCCTAG+AGG 0.484161 8:-70785248 None:intergenic
GAAAGATATTATTGATCGGA+TGG 0.484306 8:+70784533 MsG0880046226.01.T01:CDS
CATGAACGTGGTGTTAGTCT+TGG 0.484870 8:+70784462 MsG0880046226.01.T01:CDS
CTCTTCACGAAGCTGGTCAT+CGG 0.485803 8:-70785624 None:intergenic
AGTGGAAGAGTTTGGATGAG+AGG 0.486737 8:+70784679 MsG0880046226.01.T01:CDS
AAGAGGTGCAGAAGTTTGAG+TGG 0.490479 8:+70784661 MsG0880046226.01.T01:CDS
TGAACATCCCCAGTTATAAC+CGG 0.491360 8:-70785077 None:intergenic
GGATGAGAGGATGAAGAATT+GGG 0.498960 8:+70784692 MsG0880046226.01.T01:CDS
CTCCGGCGACCTCTTACAAA+TGG 0.499086 8:-70784871 None:intergenic
ATTGATCGGATGGTTAGGTC+TGG 0.500159 8:+70784543 MsG0880046226.01.T01:CDS
CCAGAAAGCCGGTTATAACT+GGG 0.500675 8:+70785069 MsG0880046226.01.T01:CDS
AAAATCCTAAACAGCTTCTC+CGG 0.501012 8:-70784888 None:intergenic
CGAAGACCATGCATTGCAGC+AGG 0.503483 8:+70785319 MsG0880046226.01.T01:CDS
GGACTTGGGGAGGCTGTGAA+AGG 0.503815 8:+70785005 MsG0880046226.01.T01:CDS
TCGTTTATGGGGAGGTTTAG+CGG 0.504852 8:+70785689 MsG0880046226.01.T01:CDS
TGAGAAATTGAGTATTGAAG+AGG 0.506438 8:+70784644 MsG0880046226.01.T01:CDS
AGTTCGCAGGACGGTGCCGG+TGG 0.508132 8:+70784381 MsG0880046226.01.T01:CDS
GCCGTGGTTGGTGGTGGTGG+CGG 0.509112 8:-70783809 None:intergenic
AAATAAGTCTCTAGATCCTC+CGG 0.509666 8:-70785755 None:intergenic
GTAAGCGCCGCGGTCAGGTA+CGG 0.511980 8:+70785426 MsG0880046226.01.T01:CDS
GAGGTTTAGCGGTCAGCTGG+AGG 0.513245 8:+70785700 MsG0880046226.01.T01:CDS
TGCGGATTATAGCGATGCTA+TGG 0.514545 8:+70785139 MsG0880046226.01.T01:CDS
ATCGTCTCCGCCAGCGCCGG+TGG 0.515320 8:-70783842 None:intergenic
TTCCGCCGGATGCTGTTAGC+CGG 0.518041 8:+70784325 MsG0880046226.01.T01:CDS
TATACAGGGTTCAGACAGCT+TGG 0.522120 8:+70785594 MsG0880046226.01.T01:CDS
CAGGTACGGCAGTATGCTAC+GGG 0.525123 8:+70785440 MsG0880046226.01.T01:CDS
TGTTTCAATGAAACAGCTAA+AGG 0.529199 8:+70784810 MsG0880046226.01.T01:CDS
GGCTTGTTTGAGGGATGAAG+GGG 0.529766 8:+70785493 MsG0880046226.01.T01:CDS
TCCGCCGCCGCCGTGGTTGG+TGG 0.530179 8:-70783818 None:intergenic
TGAGGGATGAAGGGGTTGGA+GGG 0.530800 8:+70785501 MsG0880046226.01.T01:CDS
TCGCCGCCGATTAATTCCGC+TGG 0.530990 8:+70784201 MsG0880046226.01.T01:CDS
CAGGGTTCAGACAGCTTGGA+AGG 0.532910 8:+70785598 MsG0880046226.01.T01:CDS
GAAGGACTCAGATCTTATAG+AGG 0.537090 8:+70785382 MsG0880046226.01.T01:CDS
AGATGCTTTGCCTGAATTGG+AGG 0.537441 8:+70784932 MsG0880046226.01.T01:CDS
GAATGAGACTTCCAGAAAGC+CGG 0.539455 8:+70785058 MsG0880046226.01.T01:CDS
CTTATGTGATGTAATACAGC+AGG 0.540840 8:-70785800 None:intergenic
GACTTGGGGAGGCTGTGAAA+GGG 0.541087 8:+70785006 MsG0880046226.01.T01:CDS
CCGCAGCTTCGAATCGGTCA+AGG 0.541154 8:-70784038 None:intergenic
TCAGGTACGGCAGTATGCTA+CGG 0.542639 8:+70785439 MsG0880046226.01.T01:CDS
GCCGCCGCCGTGGTTGGTGG+TGG 0.544351 8:-70783815 None:intergenic
TCGATCGTCTCCGCCAGCGC+CGG 0.545758 8:-70783845 None:intergenic
TTAGAAGCTTTGTCCCCTCT+AGG 0.547956 8:+70785233 MsG0880046226.01.T01:CDS
TGAATTGGAGGATATGGTTA+CGG 0.548359 8:+70784944 MsG0880046226.01.T01:CDS
GTCTTCGTCGACGTCGTCGT+CGG 0.550950 8:-70784016 None:intergenic
CGGGGTACCTTAGAGCCTGT+TGG 0.554700 8:+70785459 MsG0880046226.01.T01:CDS
TTCATCCCTCAAACAAGCCA+AGG 0.558253 8:-70785489 None:intergenic
CTGCATACCGCTCGTTTATG+GGG 0.560603 8:+70785678 MsG0880046226.01.T01:CDS
TAGCGTTCGTCGTGACGCGT+TGG 0.560625 8:+70784596 MsG0880046226.01.T01:CDS
ATTTGAAAGATATTATTGAT+CGG 0.563345 8:+70784529 MsG0880046226.01.T01:CDS
GCGAATAAATATATCAGAGA+AGG 0.564463 8:+70785649 MsG0880046226.01.T01:CDS
GGAGAGACGGTTGTCGAAGG+TGG 0.566049 8:-70783947 None:intergenic
TTCATCACATAACGAGGCAA+AGG 0.566666 8:-70785101 None:intergenic
TGCCATTTGTAAGAGGTCGC+CGG 0.568876 8:+70784869 MsG0880046226.01.T01:CDS
CTACACCGGCTAACAGCATC+CGG 0.569586 8:-70784330 None:intergenic
AGGGTGTGCTTAGAGGACTT+GGG 0.570928 8:+70784991 MsG0880046226.01.T01:CDS
AAAACACCTGCTGCAATGCA+TGG 0.571711 8:-70785325 None:intergenic
CAAATACATCAAGTATGTAC+CGG 0.572141 8:+70785736 MsG0880046226.01.T01:CDS
GCCGCCACCACCACCAACCA+CGG 0.572840 8:+70783808 MsG0880046226.01.T01:CDS
GATGAACAATCTGCATTACC+TGG 0.578458 8:+70785349 MsG0880046226.01.T01:CDS
CATACCGCTCGTTTATGGGG+AGG 0.579620 8:+70785681 MsG0880046226.01.T01:CDS
CTCATCCTCGAGCCTCGACA+TGG 0.579888 8:-70784274 None:intergenic
ACAATATCTGTCGTCCTAGA+GGG 0.580122 8:-70785247 None:intergenic
AGGTTTAGCGGTCAGCTGGA+GGG 0.584483 8:+70785701 MsG0880046226.01.T01:CDS
CTCTAATAATGCATCAAGGA+TGG 0.585042 8:+70785526 MsG0880046226.01.T01:CDS
AGTCCTTCACTTTACGCACC+AGG 0.585464 8:-70785367 None:intergenic
TGATGAGATTATTCAGTGGA+TGG 0.587474 8:+70784164 MsG0880046226.01.T01:CDS
GTTCGCAGGACGGTGCCGGT+GGG 0.588023 8:+70784382 MsG0880046226.01.T01:CDS
AGTTGATTGACGAGAAGACT+CGG 0.589836 8:-70784094 None:intergenic
CCTTAGAGCCTGTTGGAGCA+AGG 0.595856 8:+70785466 MsG0880046226.01.T01:CDS
TTACCTGGTGCGTAAAGTGA+AGG 0.597081 8:+70785364 MsG0880046226.01.T01:CDS
TGAACTTGAGCACAATCTTG+AGG 0.601252 8:+70785280 MsG0880046226.01.T01:CDS
CGATCCAAGTTGCCATGTCG+AGG 0.603013 8:+70784262 MsG0880046226.01.T01:CDS
TGTGCTTAGAGGACTTGGGG+AGG 0.604725 8:+70784995 MsG0880046226.01.T01:CDS
GGTTAGGTCTGGATATGAGA+GGG 0.609758 8:+70784554 MsG0880046226.01.T01:CDS
AGTTGCCATGTCGAGGCTCG+AGG 0.615415 8:+70784269 MsG0880046226.01.T01:CDS
GTTTGTGATTACTGAGGCGA+AGG 0.619367 8:+70784971 MsG0880046226.01.T01:CDS
ATGTCTTTCAGTTCGCAGGA+CGG 0.623036 8:+70784372 MsG0880046226.01.T01:CDS
ACCGGAGAGACGGTTGTCGA+AGG 0.623770 8:-70783950 None:intergenic
GCCGGTGTAGTACTAATAGG+AGG 0.627601 8:+70784343 MsG0880046226.01.T01:CDS
GGTCGGTGATACCGGAGAGA+CGG 0.630028 8:-70783960 None:intergenic
TCTCATAGGTTTCATGAACG+TGG 0.632602 8:+70784450 MsG0880046226.01.T01:CDS
GGGTGTGCTTAGAGGACTTG+GGG 0.635936 8:+70784992 MsG0880046226.01.T01:CDS
TCCTCCTATTAGTACTACAC+CGG 0.639220 8:-70784344 None:intergenic
TCATGAAACCTATGAGAACC+AGG 0.642446 8:-70784444 None:intergenic
AGAATTATCATCAAACCCAC+CGG 0.644146 8:-70784397 None:intergenic
GCCACCACCACCAACCACGG+CGG 0.645487 8:+70783811 MsG0880046226.01.T01:CDS
GATTTGTAATACTGTTCCGC+CGG 0.645631 8:+70784311 MsG0880046226.01.T01:CDS
GGAGCTCTAATAATGCATCA+AGG 0.649173 8:+70785522 MsG0880046226.01.T01:CDS
CCTTGACCGATTCGAAGCTG+CGG 0.650783 8:+70784038 MsG0880046226.01.T01:CDS
TGGTTAGGTCTGGATATGAG+AGG 0.651249 8:+70784553 MsG0880046226.01.T01:CDS
GAATTACCTGAAACTGCTTG+CGG 0.651276 8:+70785121 MsG0880046226.01.T01:CDS
CAATATCTGTCGTCCTAGAG+GGG 0.655074 8:-70785246 None:intergenic
ATCGTCGCCGTTGATAAGGT+CGG 0.656137 8:-70783977 None:intergenic
AGGTAATTCATCACATAACG+AGG 0.663103 8:-70785107 None:intergenic
AGGGGACAAAGCTTCTAACT+GGG 0.663155 8:-70785228 None:intergenic
GGATGAGTTTGTGATTACTG+AGG 0.669005 8:+70784965 MsG0880046226.01.T01:CDS
CAGAAAGCCGGTTATAACTG+GGG 0.674324 8:+70785070 MsG0880046226.01.T01:CDS
ATACATCAAGTATGTACCGG+AGG 0.675429 8:+70785739 MsG0880046226.01.T01:CDS
GGTATCACCGACCTTATCAA+CGG 0.676562 8:+70783970 MsG0880046226.01.T01:CDS
TAGACTTCAGGATCATTCGG+AGG 0.689209 8:-70784129 None:intergenic
TTTCCAGCGGAATTAATCGG+CGG 0.697053 8:-70784204 None:intergenic
TTTGTGATTACTGAGGCGAA+GGG 0.701534 8:+70784972 MsG0880046226.01.T01:CDS
CATACTGCCGTACCTGACCG+CGG 0.704323 8:-70785433 None:intergenic
CACCGGCTAACAGCATCCGG+CGG 0.709949 8:-70784327 None:intergenic
AATTGGGTTCGTAAGCGCCG+CGG 0.718269 8:+70785416 MsG0880046226.01.T01:CDS
TGATTGACGAGAAGACTCGG+TGG 0.724015 8:-70784091 None:intergenic
CTGTTGATGAGATTATTCAG+TGG 0.751504 8:+70784160 MsG0880046226.01.T01:CDS
TAAACCTCCCCATAAACGAG+CGG 0.756814 8:-70785685 None:intergenic
AGGTACGGCAGTATGCTACG+GGG 0.821280 8:+70785441 MsG0880046226.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATTAGATTTATTTGA+AGG + Chr8:70785773-70785792 MsG0880046226.01.T01:CDS 10.0%
!! ATTTGAAAGATATTATTGAT+CGG + Chr8:70784529-70784548 MsG0880046226.01.T01:CDS 15.0%
!!! TATCACTTTAAAAATGATTT+GGG + Chr8:70785194-70785213 MsG0880046226.01.T01:CDS 15.0%
!!! TTATCACTTTAAAAATGATT+TGG + Chr8:70785193-70785212 MsG0880046226.01.T01:CDS 15.0%
!!! TGATGATTTATTTGTTGATT+TGG + Chr8:70784485-70784504 MsG0880046226.01.T01:CDS 20.0%
!!! TTCAAATTCAAAATTGATTC+AGG - Chr8:70784516-70784535 None:intergenic 20.0%
! AAAAACCGGTAAGATTATAT+TGG + Chr8:70784224-70784243 MsG0880046226.01.T01:CDS 25.0%
!! GTTATGATGTTGTTGAATTT+TGG + Chr8:70784837-70784856 MsG0880046226.01.T01:CDS 25.0%
!!! GTGTTTTGAAGATATATACA+GGG + Chr8:70785580-70785599 MsG0880046226.01.T01:CDS 25.0%
AAATAGACTTCAGGATCATT+CGG - Chr8:70784135-70784154 None:intergenic 30.0%
ACGATCCAATATAATCTTAC+CGG - Chr8:70784232-70784251 None:intergenic 30.0%
ATATTATTGATCGGATGGTT+AGG + Chr8:70784538-70784557 MsG0880046226.01.T01:CDS 30.0%
CAAATACATCAAGTATGTAC+CGG + Chr8:70785736-70785755 MsG0880046226.01.T01:CDS 30.0%
GAAAGATATTATTGATCGGA+TGG + Chr8:70784533-70784552 MsG0880046226.01.T01:CDS 30.0%
GCGAATAAATATATCAGAGA+AGG + Chr8:70785649-70785668 MsG0880046226.01.T01:CDS 30.0%
TGTTTCAATGAAACAGCTAA+AGG + Chr8:70784810-70784829 MsG0880046226.01.T01:CDS 30.0%
! CACTTTAAAAATGATTTGGG+TGG + Chr8:70785197-70785216 MsG0880046226.01.T01:CDS 30.0%
! TAGGATTTTGGATATGTATG+AGG + Chr8:70784902-70784921 MsG0880046226.01.T01:CDS 30.0%
! TCAGATCTTATAGAGGTTTT+GGG + Chr8:70785389-70785408 MsG0880046226.01.T01:CDS 30.0%
!! TGAGAAATTGAGTATTGAAG+AGG + Chr8:70784644-70784663 MsG0880046226.01.T01:CDS 30.0%
!!! CGTGTTTTGAAGATATATAC+AGG + Chr8:70785579-70785598 MsG0880046226.01.T01:CDS 30.0%
AAAATCCTAAACAGCTTCTC+CGG - Chr8:70784891-70784910 None:intergenic 35.0%
AAATAAGTCTCTAGATCCTC+CGG - Chr8:70785758-70785777 None:intergenic 35.0%
AGAATTATCATCAAACCCAC+CGG - Chr8:70784400-70784419 None:intergenic 35.0%
AGGTAATTCATCACATAACG+AGG - Chr8:70785110-70785129 None:intergenic 35.0%
ATGTCTTCACGATCTTCTTT+GGG - Chr8:70783913-70783932 None:intergenic 35.0%
ATTAATTCCGCTGGAAAAAC+CGG + Chr8:70784210-70784229 MsG0880046226.01.T01:CDS 35.0%
CTCTAATAATGCATCAAGGA+TGG + Chr8:70785526-70785545 MsG0880046226.01.T01:CDS 35.0%
CTGAGTTTGAGAGTTGTATT+CGG + Chr8:70785036-70785055 MsG0880046226.01.T01:CDS 35.0%
CTGCTGTATTACATCACATA+AGG + Chr8:70785801-70785820 MsG0880046226.01.T01:CDS 35.0%
CTTATGTGATGTAATACAGC+AGG - Chr8:70785803-70785822 None:intergenic 35.0%
TGAATTGGAGGATATGGTTA+CGG + Chr8:70784944-70784963 MsG0880046226.01.T01:CDS 35.0%
TGATGAGATTATTCAGTGGA+TGG + Chr8:70784164-70784183 MsG0880046226.01.T01:CDS 35.0%
! AGGCTATGTGATAGTCTTTT+CGG + Chr8:70784762-70784781 MsG0880046226.01.T01:CDS 35.0%
! CAGATCTTATAGAGGTTTTG+GGG + Chr8:70785390-70785409 MsG0880046226.01.T01:CDS 35.0%
! CTCAGATCTTATAGAGGTTT+TGG + Chr8:70785388-70785407 MsG0880046226.01.T01:CDS 35.0%
! CTGTTGATGAGATTATTCAG+TGG + Chr8:70784160-70784179 MsG0880046226.01.T01:CDS 35.0%
! GTGGGTTTGATGATAATTCT+GGG + Chr8:70784400-70784419 MsG0880046226.01.T01:CDS 35.0%
! GTTTTTCCAGCGGAATTAAT+CGG - Chr8:70784210-70784229 None:intergenic 35.0%
!! AGATCTTATAGAGGTTTTGG+GGG + Chr8:70785391-70785410 MsG0880046226.01.T01:CDS 35.0%
!! GATGATAATTCTGGGAGTTT+TGG + Chr8:70784408-70784427 MsG0880046226.01.T01:CDS 35.0%
!!! TTGTTAGGGTTTTGTTGAGT+GGG + Chr8:70784733-70784752 MsG0880046226.01.T01:CDS 35.0%
AACAATATCTGTCGTCCTAG+AGG - Chr8:70785251-70785270 None:intergenic 40.0%
AAGCTGTTAAGGTCGTTGTT+AGG + Chr8:70784718-70784737 MsG0880046226.01.T01:CDS 40.0%
ACAATATCTGTCGTCCTAGA+GGG - Chr8:70785250-70785269 None:intergenic 40.0%
AGCTGTTAAGGTCGTTGTTA+GGG + Chr8:70784719-70784738 MsG0880046226.01.T01:CDS 40.0%
AGTTGATTGACGAGAAGACT+CGG - Chr8:70784097-70784116 None:intergenic 40.0%
ATACATCAAGTATGTACCGG+AGG + Chr8:70785739-70785758 MsG0880046226.01.T01:CDS 40.0%
CATGTCTTCACGATCTTCTT+TGG - Chr8:70783914-70783933 None:intergenic 40.0%
GAAGGACTCAGATCTTATAG+AGG + Chr8:70785382-70785401 MsG0880046226.01.T01:CDS 40.0%
GAAGTTTGAGTGGAAGAGTT+TGG + Chr8:70784671-70784690 MsG0880046226.01.T01:CDS 40.0%
GAATTACCTGAAACTGCTTG+CGG + Chr8:70785121-70785140 MsG0880046226.01.T01:CDS 40.0%
GATGAACAATCTGCATTACC+TGG + Chr8:70785349-70785368 MsG0880046226.01.T01:CDS 40.0%
GATTTGTAATACTGTTCCGC+CGG + Chr8:70784311-70784330 MsG0880046226.01.T01:CDS 40.0%
GGATGAGAGGATGAAGAATT+GGG + Chr8:70784692-70784711 MsG0880046226.01.T01:CDS 40.0%
GGATGAGTTTGTGATTACTG+AGG + Chr8:70784965-70784984 MsG0880046226.01.T01:CDS 40.0%
GTAACCATATCCTCCAATTC+AGG - Chr8:70784945-70784964 None:intergenic 40.0%
GTTGAGTGTTTGGCAATTCT+GGG + Chr8:70784618-70784637 MsG0880046226.01.T01:CDS 40.0%
TATAATCCGCAAGCAGTTTC+AGG - Chr8:70785130-70785149 None:intergenic 40.0%
TCATGAAACCTATGAGAACC+AGG - Chr8:70784447-70784466 None:intergenic 40.0%
TCCTCCTATTAGTACTACAC+CGG - Chr8:70784347-70784366 None:intergenic 40.0%
TCTCATAGGTTTCATGAACG+TGG + Chr8:70784450-70784469 MsG0880046226.01.T01:CDS 40.0%
TGAACATCCCCAGTTATAAC+CGG - Chr8:70785080-70785099 None:intergenic 40.0%
TGAACTTGAGCACAATCTTG+AGG + Chr8:70785280-70785299 MsG0880046226.01.T01:CDS 40.0%
TGGATGAGAGGATGAAGAAT+TGG + Chr8:70784691-70784710 MsG0880046226.01.T01:CDS 40.0%
TTAGCCGGTGTAGTACTAAT+AGG + Chr8:70784340-70784359 MsG0880046226.01.T01:CDS 40.0%
TTCATCACATAACGAGGCAA+AGG - Chr8:70785104-70785123 None:intergenic 40.0%
TTTGCCTGAATTGGAGGATA+TGG + Chr8:70784938-70784957 MsG0880046226.01.T01:CDS 40.0%
TTTGTGATTACTGAGGCGAA+GGG + Chr8:70784972-70784991 MsG0880046226.01.T01:CDS 40.0%
! AAGCAGTTGCCATTTGTAAG+AGG + Chr8:70784862-70784881 MsG0880046226.01.T01:CDS 40.0%
! ACAGCGTTGAAATAGACTTC+AGG - Chr8:70784144-70784163 None:intergenic 40.0%
! GGAGCTCTAATAATGCATCA+AGG + Chr8:70785522-70785541 MsG0880046226.01.T01:CDS 40.0%
! GGTGGGTTTGATGATAATTC+TGG + Chr8:70784399-70784418 MsG0880046226.01.T01:CDS 40.0%
! TGATAGTCTTTTCGGTGATC+TGG + Chr8:70784770-70784789 MsG0880046226.01.T01:CDS 40.0%
!! GATCTTCTTTGGGAGCTTTT+AGG - Chr8:70783903-70783922 None:intergenic 40.0%
!! GCTTTTGGAAATCAGTGAAG+AGG + Chr8:70785166-70785185 MsG0880046226.01.T01:CDS 40.0%
!! GGAGAAGCTGTTTAGGATTT+TGG + Chr8:70784890-70784909 MsG0880046226.01.T01:CDS 40.0%
!!! AATCTTACCGGTTTTTCCAG+CGG - Chr8:70784220-70784239 None:intergenic 40.0%
!!! AGAGGTTTTGGGGGATAATT+GGG + Chr8:70785400-70785419 MsG0880046226.01.T01:CDS 40.0%
!!! GTTGTTAGGGTTTTGTTGAG+TGG + Chr8:70784732-70784751 MsG0880046226.01.T01:CDS 40.0%
!!! TAGAGGTTTTGGGGGATAAT+TGG + Chr8:70785399-70785418 MsG0880046226.01.T01:CDS 40.0%
!!! TGTTAGGGTTTTGTTGAGTG+GGG + Chr8:70784734-70784753 MsG0880046226.01.T01:CDS 40.0%
AAAACACCTGCTGCAATGCA+TGG - Chr8:70785328-70785347 None:intergenic 45.0%
AGATGCTTTGCCTGAATTGG+AGG + Chr8:70784932-70784951 MsG0880046226.01.T01:CDS 45.0%
AGGGGACAAAGCTTCTAACT+GGG - Chr8:70785231-70785250 None:intergenic 45.0%
AGTGGAAGAGTTTGGATGAG+AGG + Chr8:70784679-70784698 MsG0880046226.01.T01:CDS 45.0%
ATGTCTTTCAGTTCGCAGGA+CGG + Chr8:70784372-70784391 MsG0880046226.01.T01:CDS 45.0%
ATTGATCGGATGGTTAGGTC+TGG + Chr8:70784543-70784562 MsG0880046226.01.T01:CDS 45.0%
CAATATCTGTCGTCCTAGAG+GGG - Chr8:70785249-70785268 None:intergenic 45.0%
CAGAAAGCCGGTTATAACTG+GGG + Chr8:70785070-70785089 MsG0880046226.01.T01:CDS 45.0%
CCAGAAAGCCGGTTATAACT+GGG + Chr8:70785069-70785088 MsG0880046226.01.T01:CDS 45.0%
GAATGAGACTTCCAGAAAGC+CGG + Chr8:70785058-70785077 MsG0880046226.01.T01:CDS 45.0%
GAATTGGGTGCAAGCTGTTA+AGG + Chr8:70784707-70784726 MsG0880046226.01.T01:CDS 45.0%
GAGAGATGCTTTGCCTGAAT+TGG + Chr8:70784929-70784948 MsG0880046226.01.T01:CDS 45.0%
GGTATCACCGACCTTATCAA+CGG + Chr8:70783970-70783989 MsG0880046226.01.T01:CDS 45.0%
GGTTAGGTCTGGATATGAGA+GGG + Chr8:70784554-70784573 MsG0880046226.01.T01:CDS 45.0%
GGTTGAGTGTTTGGCAATTC+TGG + Chr8:70784617-70784636 MsG0880046226.01.T01:CDS 45.0%
GTCGTCGGATTTGGAAGATT+TGG - Chr8:70784004-70784023 None:intergenic 45.0%
GTTTGTGATTACTGAGGCGA+AGG + Chr8:70784971-70784990 MsG0880046226.01.T01:CDS 45.0%
TAAACCTCCCCATAAACGAG+CGG - Chr8:70785688-70785707 None:intergenic 45.0%
TAGACTTCAGGATCATTCGG+AGG - Chr8:70784132-70784151 None:intergenic 45.0%
TATACAGGGTTCAGACAGCT+TGG + Chr8:70785594-70785613 MsG0880046226.01.T01:CDS 45.0%
TCCAGAAAGCCGGTTATAAC+TGG + Chr8:70785068-70785087 MsG0880046226.01.T01:CDS 45.0%
TCGTTTATGGGGAGGTTTAG+CGG + Chr8:70785689-70785708 MsG0880046226.01.T01:CDS 45.0%
TGGTTAGGTCTGGATATGAG+AGG + Chr8:70784553-70784572 MsG0880046226.01.T01:CDS 45.0%
TTACCTGGTGCGTAAAGTGA+AGG + Chr8:70785364-70785383 MsG0880046226.01.T01:CDS 45.0%
TTCATCCCTCAAACAAGCCA+AGG - Chr8:70785492-70785511 None:intergenic 45.0%
TTCGATGTCTTTCAGTTCGC+AGG + Chr8:70784368-70784387 MsG0880046226.01.T01:CDS 45.0%
TTTCCAGCGGAATTAATCGG+CGG - Chr8:70784207-70784226 None:intergenic 45.0%
! AAGAGGTGCAGAAGTTTGAG+TGG + Chr8:70784661-70784680 MsG0880046226.01.T01:CDS 45.0%
! CATGAACGTGGTGTTAGTCT+TGG + Chr8:70784462-70784481 MsG0880046226.01.T01:CDS 45.0%
! CGATGCTATGGATTCGCTTT+TGG + Chr8:70785151-70785170 MsG0880046226.01.T01:CDS 45.0%
! GTTGATAAGGTCGGTGATAC+CGG - Chr8:70783971-70783990 None:intergenic 45.0%
! TAGTCTTTTCGGTGATCTGG+AGG + Chr8:70784773-70784792 MsG0880046226.01.T01:CDS 45.0%
! TGCGGATTATAGCGATGCTA+TGG + Chr8:70785139-70785158 MsG0880046226.01.T01:CDS 45.0%
! TGGGAGCTTTTAGGCTTTTG+AGG - Chr8:70783894-70783913 None:intergenic 45.0%
! TTAGAAGCTTTGTCCCCTCT+AGG + Chr8:70785233-70785252 MsG0880046226.01.T01:CDS 45.0%
! TTTTGTTGAGTGGGGAGAAG+AGG + Chr8:70784742-70784761 MsG0880046226.01.T01:CDS 45.0%
!! ATATGAGAGGGAGTGTTTGC+AGG + Chr8:70784566-70784585 MsG0880046226.01.T01:CDS 45.0%
!! TGCATCAAGGATGGCTTTGA+AGG + Chr8:70785535-70785554 MsG0880046226.01.T01:CDS 45.0%
!! TGGCTTGTTTGAGGGATGAA+GGG + Chr8:70785492-70785511 MsG0880046226.01.T01:CDS 45.0%
!! TTGGCTTGTTTGAGGGATGA+AGG + Chr8:70785491-70785510 MsG0880046226.01.T01:CDS 45.0%
!!! TCTGGGAGTTTTGGTGATGT+GGG + Chr8:70784417-70784436 MsG0880046226.01.T01:CDS 45.0%
!!! TTCTGGGAGTTTTGGTGATG+TGG + Chr8:70784416-70784435 MsG0880046226.01.T01:CDS 45.0%
ACCTGCATACCGCTCGTTTA+TGG + Chr8:70785676-70785695 MsG0880046226.01.T01:CDS 50.0%
AGGGTGTGCTTAGAGGACTT+GGG + Chr8:70784991-70785010 MsG0880046226.01.T01:CDS 50.0%
AGTCCTTCACTTTACGCACC+AGG - Chr8:70785370-70785389 None:intergenic 50.0%
CCTGCATACCGCTCGTTTAT+GGG + Chr8:70785677-70785696 MsG0880046226.01.T01:CDS 50.0%
CTCTTCACGAAGCTGGTCAT+CGG - Chr8:70785627-70785646 None:intergenic 50.0%
CTGCATACCGCTCGTTTATG+GGG + Chr8:70785678-70785697 MsG0880046226.01.T01:CDS 50.0%
CTTTCTCCGCAGCTTCGAAT+CGG - Chr8:70784047-70784066 None:intergenic 50.0%
GAGGGGACAAAGCTTCTAAC+TGG - Chr8:70785232-70785251 None:intergenic 50.0%
GCCGGTGTAGTACTAATAGG+AGG + Chr8:70784343-70784362 MsG0880046226.01.T01:CDS 50.0%
TCAGGTACGGCAGTATGCTA+CGG + Chr8:70785439-70785458 MsG0880046226.01.T01:CDS 50.0%
TCTTCACGAAGCTGGTCATC+GGG - Chr8:70785626-70785645 None:intergenic 50.0%
TGATTGACGAGAAGACTCGG+TGG - Chr8:70784094-70784113 None:intergenic 50.0%
TGGAATCGTCGCCGTTGATA+AGG - Chr8:70783984-70784003 None:intergenic 50.0%
TGTTTGAGGGATGAAGGGGT+TGG + Chr8:70785497-70785516 MsG0880046226.01.T01:CDS 50.0%
TTCGCATCTCTTCACGAAGC+TGG - Chr8:70785634-70785653 None:intergenic 50.0%
! AAGGGTGTGCTTAGAGGACT+TGG + Chr8:70784990-70785009 MsG0880046226.01.T01:CDS 50.0%
! ATCGTCGCCGTTGATAAGGT+CGG - Chr8:70783980-70783999 None:intergenic 50.0%
! CCCAGTTATAACCGGCTTTC+TGG - Chr8:70785072-70785091 None:intergenic 50.0%
! GGCTTGTTTGAGGGATGAAG+GGG + Chr8:70785493-70785512 MsG0880046226.01.T01:CDS 50.0%
! TGCCATTTGTAAGAGGTCGC+CGG + Chr8:70784869-70784888 MsG0880046226.01.T01:CDS 50.0%
! TGGGTGATCCTGGTTCTCAT+AGG + Chr8:70784436-70784455 MsG0880046226.01.T01:CDS 50.0%
!! CAAGGCCTTGGCTTGTTTGA+GGG + Chr8:70785484-70785503 MsG0880046226.01.T01:CDS 50.0%
!! TGACGCGTTGGTTGAGTGTT+TGG + Chr8:70784608-70784627 MsG0880046226.01.T01:CDS 50.0%
!! TTTGGTGATGTGGGTGATCC+TGG + Chr8:70784426-70784445 MsG0880046226.01.T01:CDS 50.0%
ACCTTCGACAACCGTCTCTC+CGG + Chr8:70783949-70783968 MsG0880046226.01.T01:CDS 55.0%
AGGTACGGCAGTATGCTACG+GGG + Chr8:70785441-70785460 MsG0880046226.01.T01:CDS 55.0%
AGGTTTAGCGGTCAGCTGGA+GGG + Chr8:70785701-70785720 MsG0880046226.01.T01:CDS 55.0%
CAGGGTTCAGACAGCTTGGA+AGG + Chr8:70785598-70785617 MsG0880046226.01.T01:CDS 55.0%
CAGGTACGGCAGTATGCTAC+GGG + Chr8:70785440-70785459 MsG0880046226.01.T01:CDS 55.0%
CATACCGCTCGTTTATGGGG+AGG + Chr8:70785681-70785700 MsG0880046226.01.T01:CDS 55.0%
CCCATAAACGAGCGGTATGC+AGG - Chr8:70785680-70785699 None:intergenic 55.0%
CCTTAGAGCCTGTTGGAGCA+AGG + Chr8:70785466-70785485 MsG0880046226.01.T01:CDS 55.0%
CCTTGCTCCAACAGGCTCTA+AGG - Chr8:70785469-70785488 None:intergenic 55.0%
CGAAGACCATGCATTGCAGC+AGG + Chr8:70785319-70785338 MsG0880046226.01.T01:CDS 55.0%
CGATCCAAGTTGCCATGTCG+AGG + Chr8:70784262-70784281 MsG0880046226.01.T01:CDS 55.0%
CTCCGGCGACCTCTTACAAA+TGG - Chr8:70784874-70784893 None:intergenic 55.0%
GACTTGGGGAGGCTGTGAAA+GGG + Chr8:70785006-70785025 MsG0880046226.01.T01:CDS 55.0%
GGGTGTGCTTAGAGGACTTG+GGG + Chr8:70784992-70785011 MsG0880046226.01.T01:CDS 55.0%
TGAGGGATGAAGGGGTTGGA+GGG + Chr8:70785501-70785520 MsG0880046226.01.T01:CDS 55.0%
TGTGCTTAGAGGACTTGGGG+AGG + Chr8:70784995-70785014 MsG0880046226.01.T01:CDS 55.0%
TTGAGGGATGAAGGGGTTGG+AGG + Chr8:70785500-70785519 MsG0880046226.01.T01:CDS 55.0%
! AATTGGGTTCGTAAGCGCCG+CGG + Chr8:70785416-70785435 MsG0880046226.01.T01:CDS 55.0%
! CTACACCGGCTAACAGCATC+CGG - Chr8:70784333-70784352 None:intergenic 55.0%
!! CCTTGACCGATTCGAAGCTG+CGG + Chr8:70784038-70784057 MsG0880046226.01.T01:CDS 55.0%
!! GCAAGGCCTTGGCTTGTTTG+AGG + Chr8:70785483-70785502 MsG0880046226.01.T01:CDS 55.0%
ACCGGAGAGACGGTTGTCGA+AGG - Chr8:70783953-70783972 None:intergenic 60.0%
AGCCAAGGCCTTGCTCCAAC+AGG - Chr8:70785477-70785496 None:intergenic 60.0%
AGCCTGTTGGAGCAAGGCCT+TGG + Chr8:70785472-70785491 MsG0880046226.01.T01:CDS 60.0%
AGTTGCCATGTCGAGGCTCG+AGG + Chr8:70784269-70784288 MsG0880046226.01.T01:CDS 60.0%
CAGCTGGAGGGAAGACATGC+AGG + Chr8:70785713-70785732 MsG0880046226.01.T01:CDS 60.0%
CATACTGCCGTACCTGACCG+CGG - Chr8:70785436-70785455 None:intergenic 60.0%
CCGCAGCTTCGAATCGGTCA+AGG - Chr8:70784041-70784060 None:intergenic 60.0%
CGAGCCTCGACATGGCAACT+TGG - Chr8:70784269-70784288 None:intergenic 60.0%
CTCATCCTCGAGCCTCGACA+TGG - Chr8:70784277-70784296 None:intergenic 60.0%
GAGGTTTAGCGGTCAGCTGG+AGG + Chr8:70785700-70785719 MsG0880046226.01.T01:CDS 60.0%
GGACTTGGGGAGGCTGTGAA+AGG + Chr8:70785005-70785024 MsG0880046226.01.T01:CDS 60.0%
GGAGAGACGGTTGTCGAAGG+TGG - Chr8:70783950-70783969 None:intergenic 60.0%
GGTCGCCGGAGAAGCTGTTT+AGG + Chr8:70784883-70784902 MsG0880046226.01.T01:CDS 60.0%
GGTCGGTGATACCGGAGAGA+CGG - Chr8:70783963-70783982 None:intergenic 60.0%
GTCGACGTCGTCGTCGGATT+TGG - Chr8:70784013-70784032 None:intergenic 60.0%
GTCTTCGTCGACGTCGTCGT+CGG - Chr8:70784019-70784038 None:intergenic 60.0%
TAGCGTTCGTCGTGACGCGT+TGG + Chr8:70784596-70784615 MsG0880046226.01.T01:CDS 60.0%
TTCAGTTCGCAGGACGGTGC+CGG + Chr8:70784378-70784397 MsG0880046226.01.T01:CDS 60.0%
TTCCGCCGGATGCTGTTAGC+CGG + Chr8:70784325-70784344 MsG0880046226.01.T01:CDS 60.0%
! CGGGGTACCTTAGAGCCTGT+TGG + Chr8:70785459-70785478 MsG0880046226.01.T01:CDS 60.0%
! GAGGCGAAGGGTGTGCTTAG+AGG + Chr8:70784984-70785003 MsG0880046226.01.T01:CDS 60.0%
! TCGCCGCCGATTAATTCCGC+TGG + Chr8:70784201-70784220 MsG0880046226.01.T01:CDS 60.0%
GGGGAGGTTTAGCGGTCAGC+TGG + Chr8:70785697-70785716 MsG0880046226.01.T01:CDS 65.0%
! CACCGGCTAACAGCATCCGG+CGG - Chr8:70784330-70784349 None:intergenic 65.0%
! GTAAGCGCCGCGGTCAGGTA+CGG + Chr8:70785426-70785445 MsG0880046226.01.T01:CDS 65.0%
ACCACCACCAACCACGGCGG+CGG + Chr8:70783814-70783833 MsG0880046226.01.T01:CDS 70.0%
GCCACCACCACCAACCACGG+CGG + Chr8:70783811-70783830 MsG0880046226.01.T01:CDS 70.0%
GCCGCCACCACCACCAACCA+CGG + Chr8:70783808-70783827 MsG0880046226.01.T01:CDS 70.0%
TCGATCGTCTCCGCCAGCGC+CGG - Chr8:70783848-70783867 None:intergenic 70.0%
! AGTTCGCAGGACGGTGCCGG+TGG + Chr8:70784381-70784400 MsG0880046226.01.T01:CDS 70.0%
! GGTTCGTAAGCGCCGCGGTC+AGG + Chr8:70785421-70785440 MsG0880046226.01.T01:CDS 70.0%
!! GCCGTGGTTGGTGGTGGTGG+CGG - Chr8:70783812-70783831 None:intergenic 70.0%
!! GTTCGCAGGACGGTGCCGGT+GGG + Chr8:70784382-70784401 MsG0880046226.01.T01:CDS 70.0%
ACCACCAACCACGGCGGCGG+CGG + Chr8:70783817-70783836 MsG0880046226.01.T01:CDS 75.0%
! ATCGTCTCCGCCAGCGCCGG+TGG - Chr8:70783845-70783864 None:intergenic 75.0%
!! GCCGCCGTGGTTGGTGGTGG+TGG - Chr8:70783815-70783834 None:intergenic 75.0%
! TCCGCCGCCGCCGTGGTTGG+TGG - Chr8:70783821-70783840 None:intergenic 80.0%
!!! GCCGCCGCCGTGGTTGGTGG+TGG - Chr8:70783818-70783837 None:intergenic 80.0%
! CACGGCGGCGGCGGAGCCAC+CGG + Chr8:70783826-70783845 MsG0880046226.01.T01:CDS 85.0%
! GGCTCCGCCGCCGCCGTGGT+TGG - Chr8:70783824-70783843 None:intergenic 85.0%
!! GGCGGAGCCACCGGCGCTGG+CGG + Chr8:70783835-70783854 MsG0880046226.01.T01:CDS 85.0%
! CGGTGGCTCCGCCGCCGCCG+TGG - Chr8:70783828-70783847 None:intergenic 90.0%
! GGCGGCGGAGCCACCGGCGC+TGG + Chr8:70783832-70783851 MsG0880046226.01.T01:CDS 90.0%
Chromosome Type Strat End Strand Name
Chr8 gene 70783805 70785838 70783805 ID=MsG0880046226.01;Name=MsG0880046226.01
Chr8 mRNA 70783805 70785838 70783805 ID=MsG0880046226.01.T01;Parent=MsG0880046226.01;Name=MsG0880046226.01.T01;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|677
Chr8 exon 70783805 70785838 70783805 ID=MsG0880046226.01.T01:exon:15179;Parent=MsG0880046226.01.T01
Chr8 CDS 70783805 70785838 70783805 ID=MsG0880046226.01.T01:cds;Parent=MsG0880046226.01.T01
Gene Sequence

>MsG0880046226.01.T01

ATGGCCGCCACCACCACCAACCACGGCGGCGGCGGAGCCACCGGCGCTGGCGGAGACGATCGAGTTCTCGCAACAGCACAACAGATCCTCAAAAGCCTAAAAGCTCCCAAAGAAGATCGTGAAGACATGCTCTTAATCTTCTCCACCTTCGACAACCGTCTCTCCGGTATCACCGACCTTATCAACGGCGACGATTCCAAATCTTCCAAATCCGACGACGACGTCGACGAAGACCTTGACCGATTCGAAGCTGCGGAGAAAGTCATACTCAATGATTCTTCATTATCCACCGAGTCTTCTCGTCAATCAACTTCGCTTTTCGATCCTCCGAATGATCCTGAAGTCTATTTCAACGCTGTTGATGAGATTATTCAGTGGATGGAACACTTCACGATCTCGCCGCCGATTAATTCCGCTGGAAAAACCGGTAAGATTATATTGGATCGTGCTGATAACGCGATCCAAGTTGCCATGTCGAGGCTCGAGGATGAGCTTCGACATGTGTTGATTTGTAATACTGTTCCGCCGGATGCTGTTAGCCGGTGTAGTACTAATAGGAGGAGTTCGATGTCTTTCAGTTCGCAGGACGGTGCCGGTGGGTTTGATGATAATTCTGGGAGTTTTGGTGATGTGGGTGATCCTGGTTCTCATAGGTTTCATGAACGTGGTGTTAGTCTTGGTGATGATTTATTTGTTGATTTGGTTCGTCCTGAATCAATTTTGAATTTGAAAGATATTATTGATCGGATGGTTAGGTCTGGATATGAGAGGGAGTGTTTGCAGGTTTATAGTAGCGTTCGTCGTGACGCGTTGGTTGAGTGTTTGGCAATTCTGGGAGTTGAGAAATTGAGTATTGAAGAGGTGCAGAAGTTTGAGTGGAAGAGTTTGGATGAGAGGATGAAGAATTGGGTGCAAGCTGTTAAGGTCGTTGTTAGGGTTTTGTTGAGTGGGGAGAAGAGGCTATGTGATAGTCTTTTCGGTGATCTGGAGGATGTGAAAGAGATGTGTTTCAATGAAACAGCTAAAGGTTGTGTTATGATGTTGTTGAATTTTGGCGAAGCAGTTGCCATTTGTAAGAGGTCGCCGGAGAAGCTGTTTAGGATTTTGGATATGTATGAGGTTCTGAGAGATGCTTTGCCTGAATTGGAGGATATGGTTACGGATGAGTTTGTGATTACTGAGGCGAAGGGTGTGCTTAGAGGACTTGGGGAGGCTGTGAAAGGGACGTTTGCTGAGTTTGAGAGTTGTATTCGGAATGAGACTTCCAGAAAGCCGGTTATAACTGGGGATGTTCATCCTTTGCCTCGTTATGTGATGAATTACCTGAAACTGCTTGCGGATTATAGCGATGCTATGGATTCGCTTTTGGAAATCAGTGAAGAGGCTCTTTATCACTTTAAAAATGATTTGGGTGGTGATGAGTCCCAGTTAGAAGCTTTGTCCCCTCTAGGACGACAGATATTGTTGTTGATGTCTGAACTTGAGCACAATCTTGAGGAAAAATCAAAACTTTACGAAGACCATGCATTGCAGCAGGTGTTTTTGATGAACAATCTGCATTACCTGGTGCGTAAAGTGAAGGACTCAGATCTTATAGAGGTTTTGGGGGATAATTGGGTTCGTAAGCGCCGCGGTCAGGTACGGCAGTATGCTACGGGGTACCTTAGAGCCTGTTGGAGCAAGGCCTTGGCTTGTTTGAGGGATGAAGGGGTTGGAGGGAGCTCTAATAATGCATCAAGGATGGCTTTGAAGGAGAGATTCAAGAATTTCAACGCGTGTTTTGAAGATATATACAGGGTTCAGACAGCTTGGAAGGTACCCGATGACCAGCTTCGTGAAGAGATGCGAATAAATATATCAGAGAAGGTGATACCTGCATACCGCTCGTTTATGGGGAGGTTTAGCGGTCAGCTGGAGGGAAGACATGCAGGCAAATACATCAAGTATGTACCGGAGGATCTAGAGACTTATTTATTAGATTTATTTGAAGGATCACCTGCTGTATTACATCACATAAGGAGAAAGAGTACATAG

Protein sequence

>MsG0880046226.01.T01

MAATTTNHGGGGATGAGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSKSDDDVDEDLDRFEAAEKVILNDSSLSTESSRQSTSLFDPPNDPEVYFNAVDEIIQWMEHFTISPPINSAGKTGKIILDRADNAIQVAMSRLEDELRHVLICNTVPPDAVSRCSTNRRSSMSFSSQDGAGGFDDNSGSFGDVGDPGSHRFHERGVSLGDDLFVDLVRPESILNLKDIIDRMVRSGYERECLQVYSSVRRDALVECLAILGVEKLSIEEVQKFEWKSLDERMKNWVQAVKVVVRVLLSGEKRLCDSLFGDLEDVKEMCFNETAKGCVMMLLNFGEAVAICKRSPEKLFRILDMYEVLRDALPELEDMVTDEFVITEAKGVLRGLGEAVKGTFAEFESCIRNETSRKPVITGDVHPLPRYVMNYLKLLADYSDAMDSLLEISEEALYHFKNDLGGDESQLEALSPLGRQILLLMSELEHNLEEKSKLYEDHALQQVFLMNNLHYLVRKVKDSDLIEVLGDNWVRKRRGQVRQYATGYLRACWSKALACLRDEGVGGSSNNASRMALKERFKNFNACFEDIYRVQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYVPEDLETYLLDLFEGSPAVLHHIRRKST*