AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007883.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007883.01.T01 MTR_2g034750 78.862 123 25 1 21 142 18 140 3.42e-67 200
MsG0280007883.01.T01 MTR_2g034750 80.992 121 18 1 27 142 38 158 7.34e-67 200
MsG0280007883.01.T01 MTR_2g034750 81.513 119 19 1 27 142 38 156 3.08e-66 198
MsG0280007883.01.T01 MTR_2g034750 66.304 92 26 1 27 113 38 129 3.20e-35 119
MsG0280007883.01.T01 MTR_5g041790 63.889 72 22 2 67 138 40 107 1.17e-21 84.7
MsG0280007883.01.T01 MTR_5g041790 66.102 59 17 1 67 125 40 95 1.58e-19 78.2
MsG0280007883.01.T01 MTR_2g064890 56.164 73 29 1 70 142 33 102 2.06e-19 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007883.01.T01 AT4G16146 65.476 84 29 0 59 142 10 93 3.00e-36 120
MsG0280007883.01.T01 AT1G69510 61.842 76 26 1 67 142 26 98 1.47e-23 89.7
MsG0280007883.01.T01 AT1G69510 61.842 76 26 1 67 142 26 98 1.47e-23 89.7
MsG0280007883.01.T01 AT1G69510 61.842 76 26 1 67 142 26 98 1.47e-23 89.7
MsG0280007883.01.T01 AT5G64130 50.538 93 40 3 49 139 7 95 6.18e-20 79.7
MsG0280007883.01.T01 AT5G64130 39.831 118 40 4 49 139 7 120 3.44e-14 65.5

Find 40 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCGCAGTGGCGAGCAGTC+TGG 0.224017 2:+22281688 MsG0280007883.01.T01:CDS
GTTATGTACCTCAACGTTAT+TGG 0.287248 2:-22287242 None:intergenic
AAAATATGTACCTGTAGTTT+TGG 0.291948 2:-22289587 None:intergenic
GATGTGCATGCAGGTCTTCT+TGG 0.315613 2:-22289741 None:intergenic
CTCGCAGTGGCGAGCAGTCT+GGG 0.317192 2:+22281689 MsG0280007883.01.T01:CDS
ATGTGCATGCAGGTCTTCTT+GGG 0.321512 2:-22289740 None:intergenic
AGAAGACCTGCATGCACATC+TGG 0.388554 2:+22289744 MsG0280007883.01.T01:CDS
AAAAGCATCAAGTGAACTAA+TGG 0.409581 2:-22289977 None:intergenic
AAATTTCATTATGTTCTAGT+TGG 0.420742 2:+22289940 MsG0280007883.01.T01:three_prime_UTR
ACATCCGTGGGCAAGAAGTA+TGG 0.440418 2:+22289207 MsG0280007883.01.T01:CDS
GGGAGAGTAGATTCAACTAT+TGG 0.446480 2:+22289887 MsG0280007883.01.T01:intron
GCTCGTAGTGGCGAGCTCAA+TGG 0.455778 2:+22281593 MsG0280007883.01.T01:CDS
GCTCGCAATGGCGAGTAACT+TGG 0.475742 2:+22281571 None:intergenic
GACCCTGCGGCCAAAACTAC+AGG 0.475768 2:+22289577 MsG0280007883.01.T01:CDS
ATTTAAATCATATGAATCAC+TGG 0.476688 2:+22289770 MsG0280007883.01.T01:exon
TAATCTCTACAGCAAGGTGC+TGG 0.502471 2:+22289524 MsG0280007883.01.T01:intron
CAGTGGCGAGCAGTCTGGGT+TGG 0.509037 2:+22281693 MsG0280007883.01.T01:CDS
TGGTCTAGCTCGCAGTGGCG+AGG 0.522682 2:+22281613 MsG0280007883.01.T01:CDS
AGGCTTACTTTGGATATCAA+AGG 0.525503 2:-22289252 None:intergenic
GGTCTAGCTCGCAGTGGCGA+GGG 0.538102 2:+22281614 MsG0280007883.01.T01:CDS
TGTAAATTAGTCAACATCCG+TGG 0.564269 2:+22289194 MsG0280007883.01.T01:intron
AATCAACCAGATGTGCATGC+AGG 0.569567 2:-22289750 None:intergenic
TGTTGAATAGGTAAAGGAGA+TGG 0.580212 2:+22287189 MsG0280007883.01.T01:intron
AGCAGACTGGGCATTATGCA+AGG 0.588087 2:+22289421 MsG0280007883.01.T01:CDS
GTAAATTAGTCAACATCCGT+GGG 0.589767 2:+22289195 MsG0280007883.01.T01:intron
TTGCTCGCAATGGCGAGTGG+TGG 0.596672 2:+22281640 MsG0280007883.01.T01:CDS
TCCGTGGGCAAGAAGTATGG+TGG 0.600109 2:+22289210 MsG0280007883.01.T01:CDS
GCGAGGGTTATTGCTCGCAA+TGG 0.603835 2:+22281630 MsG0280007883.01.T01:CDS
GAGTGGTGGCTTGCTCGCAA+TGG 0.609215 2:+22281654 MsG0280007883.01.T01:CDS
TGTGCATGCAGGTCTTCTTG+GGG 0.609417 2:-22289739 None:intergenic
CCGTGGGCAAGAAGTATGGT+GGG 0.615015 2:+22289211 MsG0280007883.01.T01:CDS
GCGAGTAACTTGGCTCGTAG+TGG 0.633859 2:+22281581 MsG0280007883.01.T01:CDS
TTATTGCTCGCAATGGCGAG+TGG 0.634541 2:+22281637 MsG0280007883.01.T01:CDS
CCCACCATACTTCTTGCCCA+CGG 0.652575 2:-22289211 None:intergenic
TAGATTCAACTATTGGCACA+AGG 0.656838 2:+22289894 MsG0280007883.01.T01:three_prime_UTR
CTCAATGGTCTAGCTCGCAG+TGG 0.662149 2:+22281608 MsG0280007883.01.T01:CDS
GTGCATGCAGGTCTTCTTGG+GGG 0.664744 2:-22289738 None:intergenic
TTATGCTGCCAATAACGTTG+AGG 0.670547 2:+22287234 MsG0280007883.01.T01:CDS
GCGAGCGATTCTGCTCGCAG+TGG 0.684293 2:+22281676 MsG0280007883.01.T01:CDS
CAGCAGCCGTAGAGACCCTG+CGG 0.737276 2:+22289564 MsG0280007883.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATTCAATTCAATA+TGG + Chr2:22286471-22286490 MsG0280007883.01.T01:intron 10.0%
!! AATTAATTAGATAATTAAGA+CGG + Chr2:22282418-22282437 MsG0280007883.01.T01:intron 10.0%
!! ATAAAAATAAAAAAAAACAG+AGG - Chr2:22289685-22289704 None:intergenic 10.0%
!! ATATTTAATGTGAAAATATA+AGG - Chr2:22287350-22287369 None:intergenic 10.0%
!! TAATATGAATCATTTAAATT+TGG - Chr2:22286678-22286697 None:intergenic 10.0%
!! TATAATAATTATATTATACG+AGG - Chr2:22286748-22286767 None:intergenic 10.0%
!!! AATATAGATATATAATTTGT+TGG + Chr2:22289497-22289516 MsG0280007883.01.T01:intron 10.0%
!!! CAAAAAAAACTTTTTTATAA+AGG - Chr2:22282930-22282949 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - Chr2:22284166-22284185 None:intergenic 100.0%
!! AAAATTGTGTCAATTAAATT+GGG + Chr2:22288998-22289017 MsG0280007883.01.T01:intron 15.0%
!! AAAGTGAAATATATTGTATT+GGG - Chr2:22288938-22288957 None:intergenic 15.0%
!! AAATCAAAAAGAAATTGAAA+TGG - Chr2:22290027-22290046 None:intergenic 15.0%
!! AAATGTTATGAAATTGTTAA+AGG + Chr2:22285386-22285405 MsG0280007883.01.T01:intron 15.0%
!! AACAACATAGAAAATAAAAT+AGG - Chr2:22286953-22286972 None:intergenic 15.0%
!! AATGTTATGAAATTGTTAAA+GGG + Chr2:22285387-22285406 MsG0280007883.01.T01:intron 15.0%
!! ACAATAACATGAAATATTAT+AGG + Chr2:22285607-22285626 MsG0280007883.01.T01:intron 15.0%
!! ACTAACTTTCAATATTATTA+AGG - Chr2:22281995-22282014 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+AGG - Chr2:22288961-22288980 None:intergenic 15.0%
!! ATCCTTATGTAAAAAAATTA+TGG - Chr2:22288712-22288731 None:intergenic 15.0%
!! ATTAATTAGATAATTAAGAC+GGG + Chr2:22282419-22282438 MsG0280007883.01.T01:intron 15.0%
!! ATTCAGTATTATAAAAGTTA+GGG - Chr2:22289126-22289145 None:intergenic 15.0%
!! ATTGATTAATCTTCATTAAA+TGG + Chr2:22287149-22287168 MsG0280007883.01.T01:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr2:22288897-22288916 None:intergenic 15.0%
!! CTAACTTTCAATATTATTAA+GGG - Chr2:22281994-22282013 None:intergenic 15.0%
!! TAAAAAAAAAACACAACTAT+TGG + Chr2:22285758-22285777 MsG0280007883.01.T01:intron 15.0%
!! TAGAAAACTATAATTTCATA+AGG - Chr2:22288032-22288051 None:intergenic 15.0%
!! TATTCAGTATTATAAAAGTT+AGG - Chr2:22289127-22289146 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr2:22288898-22288917 None:intergenic 15.0%
!! TGAAAAATATTTCATGTATA+TGG - Chr2:22287320-22287339 None:intergenic 15.0%
!! TTAAAAAAACACAAAACTAA+CGG - Chr2:22285858-22285877 None:intergenic 15.0%
!! TTTAGTTGTACAATATATAA+TGG - Chr2:22287377-22287396 None:intergenic 15.0%
!!! ATATACATGTACATTTTAAA+AGG + Chr2:22287826-22287845 MsG0280007883.01.T01:intron 15.0%
!!! ATTGTCATTTTATAACATAA+AGG - Chr2:22285115-22285134 None:intergenic 15.0%
!!! CATTATTAATTTTTACATGA+AGG + Chr2:22287862-22287881 MsG0280007883.01.T01:intron 15.0%
!!! GATGATTTTTTTCATAAAAA+AGG + Chr2:22285247-22285266 MsG0280007883.01.T01:intron 15.0%
!!! GTTATCTAAAATAAAGTTAA+GGG + Chr2:22285316-22285335 MsG0280007883.01.T01:intron 15.0%
!!! GTTGTTATTTTATAACATAA+AGG + Chr2:22285278-22285297 MsG0280007883.01.T01:intron 15.0%
!!! GTTTGATGAATTTTTTTTTT+TGG + Chr2:22285217-22285236 MsG0280007883.01.T01:intron 15.0%
!!! TAGTTTTGCATATATAATAT+TGG - Chr2:22286008-22286027 None:intergenic 15.0%
!!! TATACATGTACATTTTAAAA+GGG + Chr2:22287827-22287846 MsG0280007883.01.T01:intron 15.0%
!!! TATGAAATTATAGTTTTCTA+AGG + Chr2:22288032-22288051 MsG0280007883.01.T01:intron 15.0%
!!! TCAAAGAAATTTTATTTTCT+AGG + Chr2:22285162-22285181 MsG0280007883.01.T01:intron 15.0%
!!! TGTTATCTAAAATAAAGTTA+AGG + Chr2:22285315-22285334 MsG0280007883.01.T01:intron 15.0%
!!! TTTATTTATTCTGATTTTCA+TGG + Chr2:22284833-22284852 MsG0280007883.01.T01:intron 15.0%
!!! TTTCTTTTAATTCTTTTTGT+TGG + Chr2:22289152-22289171 MsG0280007883.01.T01:intron 15.0%
!!! TTTTATAACATAAAGGATAA+AGG + Chr2:22285285-22285304 MsG0280007883.01.T01:intron 15.0%
!!! TTTTTTTAAATAACAGTCAA+TGG - Chr2:22289044-22289063 None:intergenic 15.0%
!! AAACTATAATTTCATAAGGT+AGG - Chr2:22288028-22288047 None:intergenic 20.0%
!! AAAGTCACTAAAATATCATA+TGG + Chr2:22288570-22288589 MsG0280007883.01.T01:intron 20.0%
!! AAATGTACATGTATATATGA+AGG - Chr2:22287822-22287841 None:intergenic 20.0%
!! AAATTTCATTATGTTCTAGT+TGG + Chr2:22289940-22289959 MsG0280007883.01.T01:three_prime_UTR 20.0%
!! AACAATTTCATAACATTTGA+GGG - Chr2:22285384-22285403 None:intergenic 20.0%
!! AACTATAATTTCATAAGGTA+GGG - Chr2:22288027-22288046 None:intergenic 20.0%
!! AAGCAAATTAGTAAATCATA+AGG + Chr2:22288618-22288637 MsG0280007883.01.T01:intron 20.0%
!! AAGTCACTAAAATATCATAT+GGG + Chr2:22288571-22288590 MsG0280007883.01.T01:intron 20.0%
!! AATAAATTCTTATGTGTAGT+AGG - Chr2:22288269-22288288 None:intergenic 20.0%
!! AATTAAATCACATTACATCT+TGG + Chr2:22282668-22282687 MsG0280007883.01.T01:intron 20.0%
!! AGAGGAAAAATTGATAAATA+AGG - Chr2:22289667-22289686 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - Chr2:22288865-22288884 None:intergenic 20.0%
!! ATAAATTCTTATGTGTAGTA+GGG - Chr2:22288268-22288287 None:intergenic 20.0%
!! ATGAATTTAAGTGATTTATG+AGG - Chr2:22282361-22282380 None:intergenic 20.0%
!! ATGTAATATATCTTAGCATT+TGG + Chr2:22286769-22286788 MsG0280007883.01.T01:intron 20.0%
!! ATTGGGTAAAAATTTAATCA+GGG + Chr2:22286264-22286283 MsG0280007883.01.T01:intron 20.0%
!! ATTTAAATCATATGAATCAC+TGG + Chr2:22289770-22289789 MsG0280007883.01.T01:exon 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + Chr2:22288997-22289016 MsG0280007883.01.T01:intron 20.0%
!! CAATGAAAAAAGATAAAAAG+TGG - Chr2:22286848-22286867 None:intergenic 20.0%
!! CACTTATATGCTATAAAAAT+TGG + Chr2:22286975-22286994 MsG0280007883.01.T01:intron 20.0%
!! CTTTGTAAAAATATTGGTAT+TGG + Chr2:22285715-22285734 MsG0280007883.01.T01:intron 20.0%
!! GAAAGTGAAATATATTGTAT+TGG - Chr2:22288939-22288958 None:intergenic 20.0%
!! GTAAATTTGCAGAAATTAAA+AGG - Chr2:22282543-22282562 None:intergenic 20.0%
!! GTTACCTAAAATAAAGTTAA+GGG - Chr2:22285056-22285075 None:intergenic 20.0%
!! GTTAGGATTTATGTATTTAT+AGG + Chr2:22284374-22284393 MsG0280007883.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - Chr2:22288864-22288883 None:intergenic 20.0%
!! TAACAATTTCATAACATTTG+AGG - Chr2:22285385-22285404 None:intergenic 20.0%
!! TATGTTTCATAAACAACTAA+AGG - Chr2:22285468-22285487 None:intergenic 20.0%
!! TGAAAGCTGTAAATATAAAT+AGG - Chr2:22287896-22287915 None:intergenic 20.0%
!! TGTTAAAAAGGATAATGAAA+GGG + Chr2:22289385-22289404 MsG0280007883.01.T01:intron 20.0%
!! TGTTACCTAAAATAAAGTTA+AGG - Chr2:22285057-22285076 None:intergenic 20.0%
!! TTGTAAAAGATTCAACAAAA+AGG - Chr2:22284718-22284737 None:intergenic 20.0%
!! TTTAACAGAAAATTAACAGA+GGG - Chr2:22285742-22285761 None:intergenic 20.0%
!! TTTACCATCCAAAAAATTTA+GGG - Chr2:22284614-22284633 None:intergenic 20.0%
!!! AAAACTTTTTTATAAAGGTG+TGG - Chr2:22282925-22282944 None:intergenic 20.0%
!!! AAATCCTCTAAAAAAAATGT+AGG - Chr2:22287794-22287813 None:intergenic 20.0%
!!! ATAGTTTGTGAATACTTTAT+AGG - Chr2:22285360-22285379 None:intergenic 20.0%
!!! ATCAATTTAACATCTTTTCA+TGG + Chr2:22281880-22281899 MsG0280007883.01.T01:intron 20.0%
!!! CAAATGGTAATGAAAATTAA+AGG + Chr2:22287478-22287497 MsG0280007883.01.T01:intron 20.0%
!!! CAATATTTTTACAAAGTGTA+GGG + Chr2:22285904-22285923 MsG0280007883.01.T01:intron 20.0%
!!! CACTTTTATAAAAAGTAAAC+TGG + Chr2:22284137-22284156 MsG0280007883.01.T01:intron 20.0%
!!! CACTTTTTATCTTTTTTCAT+TGG + Chr2:22286846-22286865 MsG0280007883.01.T01:intron 20.0%
!!! CACTTTTTTTTGTTTGAAAT+TGG + Chr2:22285684-22285703 MsG0280007883.01.T01:intron 20.0%
!!! CCATTTTTTTTGTGTTAAAA+AGG + Chr2:22289373-22289392 MsG0280007883.01.T01:intron 20.0%
!!! CCTTTTTAACACAAAAAAAA+TGG - Chr2:22289376-22289395 None:intergenic 20.0%
!!! CTCCATAATTTTTTTACATA+AGG + Chr2:22288707-22288726 MsG0280007883.01.T01:intron 20.0%
!!! GTTATTTTTTCAGTCTATTA+GGG + Chr2:22284958-22284977 MsG0280007883.01.T01:intron 20.0%
!!! TAAATGTTGTTTTTCATCAT+AGG - Chr2:22289275-22289294 None:intergenic 20.0%
!!! TATTGGTTTAAATGTGTTAT+TGG - Chr2:22285991-22286010 None:intergenic 20.0%
!!! TGTTATTTTTTCAGTCTATT+AGG + Chr2:22284957-22284976 MsG0280007883.01.T01:intron 20.0%
!!! TTAGAAAACCTTATTTATAG+AGG - Chr2:22282510-22282529 None:intergenic 20.0%
!!! TTATTTTTTCAGTCTATTAG+GGG + Chr2:22284959-22284978 MsG0280007883.01.T01:intron 20.0%
!!! TTTGATTTGTTTTGTTGAAT+AGG + Chr2:22287177-22287196 MsG0280007883.01.T01:intron 20.0%
!!! TTTTAACAGAAAATTAACAG+AGG - Chr2:22285743-22285762 None:intergenic 20.0%
! AAAAACACAACTATTGGTAT+TGG + Chr2:22285764-22285783 MsG0280007883.01.T01:intron 25.0%
! AAAGTTGTTAATATCTTGTG+TGG + Chr2:22282724-22282743 MsG0280007883.01.T01:intron 25.0%
! AAATATCATTCCAACTTTAG+AGG + Chr2:22286512-22286531 MsG0280007883.01.T01:intron 25.0%
! AAATTGCATACATTTCTATG+TGG - Chr2:22286635-22286654 None:intergenic 25.0%
! AACAACTTTGATATATGAGA+AGG - Chr2:22282713-22282732 None:intergenic 25.0%
! AAGTAGATTAGGTTCAAATT+AGG + Chr2:22288355-22288374 MsG0280007883.01.T01:intron 25.0%
! AATACTATTCAAGACATCAT+CGG + Chr2:22286073-22286092 MsG0280007883.01.T01:intron 25.0%
! AATATCATTCCAACTTTAGA+GGG + Chr2:22286513-22286532 MsG0280007883.01.T01:intron 25.0%
! ACAAAATGGCATAACAATAA+TGG - Chr2:22286706-22286725 None:intergenic 25.0%
! ACAGACTTTAGATATACATT+AGG - Chr2:22281847-22281866 None:intergenic 25.0%
! ACATAGAAATGTATGCAATT+TGG + Chr2:22286634-22286653 MsG0280007883.01.T01:intron 25.0%
! ATCAATAACATCGTAAATCA+AGG - Chr2:22282565-22282584 None:intergenic 25.0%
! ATCGTGACAAAAAAAGATAA+AGG - Chr2:22285087-22285106 None:intergenic 25.0%
! ATTGTTAGACAATATGACAT+TGG + Chr2:22286246-22286265 MsG0280007883.01.T01:intron 25.0%
! ATTTCCATTTGACTAATTCT+AGG - Chr2:22288386-22288405 None:intergenic 25.0%
! CAGACTTTAGATATACATTA+GGG - Chr2:22281846-22281865 None:intergenic 25.0%
! CATTGGGTAAAAATTTAATC+AGG + Chr2:22286263-22286282 MsG0280007883.01.T01:intron 25.0%
! CCTACACTTTGTAAAAATAT+TGG - Chr2:22285906-22285925 None:intergenic 25.0%
! CTTTACCATCCAAAAAATTT+AGG - Chr2:22284615-22284634 None:intergenic 25.0%
! CTTTGTAAAAATATTGGTGT+TGG - Chr2:22285900-22285919 None:intergenic 25.0%
! GAATTGAATTTGACATGATT+AGG - Chr2:22281960-22281979 None:intergenic 25.0%
! GTGTTAAAAAGGATAATGAA+AGG + Chr2:22289384-22289403 MsG0280007883.01.T01:intron 25.0%
! GTTTGAATTGAAATAGTCAT+AGG + Chr2:22282768-22282787 MsG0280007883.01.T01:intron 25.0%
! TAAACCTAGAATTAGTCAAA+TGG + Chr2:22288379-22288398 MsG0280007883.01.T01:intron 25.0%
! TAATTATATTATACGAGGAG+AGG - Chr2:22286743-22286762 None:intergenic 25.0%
! TATGGTAAAAGAATTAAGGA+CGG + Chr2:22288466-22288485 MsG0280007883.01.T01:intron 25.0%
! TCATATATTTATTGGACACA+TGG - Chr2:22287737-22287756 None:intergenic 25.0%
! TCATGGTTTAATCATCAAAT+CGG + Chr2:22281897-22281916 MsG0280007883.01.T01:intron 25.0%
! TGATGAAATCAAAGTAGATT+AGG + Chr2:22288344-22288363 MsG0280007883.01.T01:intron 25.0%
! TGATGACAAGAAGTTATATA+GGG - Chr2:22284808-22284827 None:intergenic 25.0%
! TTAGCATGAAGATATTTGTA+GGG + Chr2:22287964-22287983 MsG0280007883.01.T01:intron 25.0%
! TTCATTAGAGATACACTAAA+AGG - Chr2:22284912-22284931 None:intergenic 25.0%
! TTGCAGAAATTAAAAGGATA+AGG - Chr2:22282537-22282556 None:intergenic 25.0%
! TTGTTAGACAATATGACATT+GGG + Chr2:22286247-22286266 MsG0280007883.01.T01:intron 25.0%
! TTTAACAGAAAGTTAACAGA+GGG + Chr2:22285873-22285892 MsG0280007883.01.T01:intron 25.0%
! TTTAGCATGAAGATATTTGT+AGG + Chr2:22287963-22287982 MsG0280007883.01.T01:intron 25.0%
! TTTCATCTATTACCAGATAA+GGG - Chr2:22282022-22282041 None:intergenic 25.0%
! TTTCTAACCGACAATTTAAT+TGG - Chr2:22287992-22288011 None:intergenic 25.0%
!! AAAATATGTACCTGTAGTTT+TGG - Chr2:22289590-22289609 None:intergenic 25.0%
!! AACTCTAAATTGACTCTAAA+AGG + Chr2:22284772-22284791 MsG0280007883.01.T01:intron 25.0%
!! ACTAAAAGCTTTATAACCAT+TGG - Chr2:22286393-22286412 None:intergenic 25.0%
!! ATCCAAATGCATTTTAAATG+AGG + Chr2:22288730-22288749 MsG0280007883.01.T01:intron 25.0%
!! GATGAAAAGTTGAAGTTTTT+AGG - Chr2:22281782-22281801 None:intergenic 25.0%
!! TTCAAACAAAAAAAAGTGCA+AGG - Chr2:22285682-22285701 None:intergenic 25.0%
!! TTGATGACAAGAAGTTATAT+AGG - Chr2:22284809-22284828 None:intergenic 25.0%
!! TTTTAACAGAAAGTTAACAG+AGG + Chr2:22285872-22285891 MsG0280007883.01.T01:intron 25.0%
!! TTTTAGTGTATCTCTAATGA+AGG + Chr2:22284911-22284930 MsG0280007883.01.T01:intron 25.0%
!! TTTTCATCTATTACCAGATA+AGG - Chr2:22282023-22282042 None:intergenic 25.0%
!!! AAATTGTTAAAGGGTGTTTT+TGG + Chr2:22285396-22285415 MsG0280007883.01.T01:intron 25.0%
!!! AATACCCTAAATTTTTTGGA+TGG + Chr2:22284607-22284626 MsG0280007883.01.T01:intron 25.0%
!!! AGATAAGACGTTTTGATTTT+TGG - Chr2:22286602-22286621 None:intergenic 25.0%
!!! ATATCAAAGGCTTTTTCTTT+GGG - Chr2:22289242-22289261 None:intergenic 25.0%
!!! ATGACCTACATTTTTTTTAG+AGG + Chr2:22287787-22287806 MsG0280007883.01.T01:intron 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG - Chr2:22285711-22285730 None:intergenic 25.0%
!!! CCAATATTTTTACAAAGTGT+AGG + Chr2:22285903-22285922 MsG0280007883.01.T01:intron 25.0%
!!! GGACACTTTTTTTAGAAAAT+GGG - Chr2:22288829-22288848 None:intergenic 25.0%
!!! GTGTTAATTAGATGTTGTTT+TGG - Chr2:22281824-22281843 None:intergenic 25.0%
!!! TAGGCTTTCTGAAATTATAT+TGG + Chr2:22287625-22287644 MsG0280007883.01.T01:intron 25.0%
!!! TAGTCCCTTAACTTTATTTT+AGG + Chr2:22285049-22285068 MsG0280007883.01.T01:intron 25.0%
!!! TGATTTTTAGAGATGTTATG+AGG - Chr2:22282276-22282295 None:intergenic 25.0%
!!! TTAGGTTGAGAAAAGTTTTT+AGG - Chr2:22282115-22282134 None:intergenic 25.0%
!!! TTGTTTTGTTGAATAGGTAA+AGG + Chr2:22287183-22287202 MsG0280007883.01.T01:intron 25.0%
AAAACAAAACAGATGAGTTG+AGG - Chr2:22287273-22287292 None:intergenic 30.0%
ACATTTCTATGTGGATAGAT+AGG - Chr2:22286626-22286645 None:intergenic 30.0%
AGAGAAGATGCTATAGTAAA+TGG - Chr2:22287014-22287033 None:intergenic 30.0%
ATAATGCATGTTATATGCAG+GGG - Chr2:22285530-22285549 None:intergenic 30.0%
ATCCCTATTAAGTCACTTAA+AGG + Chr2:22288420-22288439 MsG0280007883.01.T01:intron 30.0%
ATGGTAAAAGAATTAAGGAC+GGG + Chr2:22288467-22288486 MsG0280007883.01.T01:intron 30.0%
ATTACCTCATATGAAAGTAG+AGG - Chr2:22286056-22286075 None:intergenic 30.0%
ATTATGTGACATACAGAAGA+AGG - Chr2:22284342-22284361 None:intergenic 30.0%
CAAAAGCAAGATGAAAGATA+AGG - Chr2:22287078-22287097 None:intergenic 30.0%
CACTAAAATATCATATGGGT+GGG + Chr2:22288575-22288594 MsG0280007883.01.T01:intron 30.0%
CCTGCACTTTGTAAAAATAT+TGG + Chr2:22285709-22285728 MsG0280007883.01.T01:intron 30.0%
GAAGTGAGGTTATAAATAGA+AGG - Chr2:22282140-22282159 None:intergenic 30.0%
GAGTCAATGTATAAATGAGA+TGG - Chr2:22286121-22286140 None:intergenic 30.0%
GATAATGCATGTTATATGCA+GGG - Chr2:22285531-22285550 None:intergenic 30.0%
GGTTATAAATAGAAGGAGTT+AGG - Chr2:22282133-22282152 None:intergenic 30.0%
GTAAAGAGAAATTAGAAGTG+AGG - Chr2:22282154-22282173 None:intergenic 30.0%
GTCCTTTAAGTGACTTAATA+GGG - Chr2:22288425-22288444 None:intergenic 30.0%
GTTTCATAAACAACTAAAGG+AGG - Chr2:22285465-22285484 None:intergenic 30.0%
TAAAAGAAATGCTCGAGTAA+AGG + Chr2:22284245-22284264 MsG0280007883.01.T01:intron 30.0%
TAGGGATCCAATTAAATTGT+CGG + Chr2:22287982-22288001 MsG0280007883.01.T01:intron 30.0%
TCACTAAAATATCATATGGG+TGG + Chr2:22288574-22288593 MsG0280007883.01.T01:intron 30.0%
TCTTGAATTTATCTTGTGGT+TGG + Chr2:22289090-22289109 MsG0280007883.01.T01:intron 30.0%
TCTTGATTGCAATGTTCAAA+TGG + Chr2:22287462-22287481 MsG0280007883.01.T01:intron 30.0%
TGGCTATGGTAAAAGAATTA+AGG + Chr2:22288462-22288481 MsG0280007883.01.T01:intron 30.0%
TGTCCTTTAAGTGACTTAAT+AGG - Chr2:22288426-22288445 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + Chr2:22289002-22289021 MsG0280007883.01.T01:intron 30.0%
TTTACTATAGCATCTTCTCT+TGG + Chr2:22287014-22287033 MsG0280007883.01.T01:intron 30.0%
! AAACAAAACAGATGAGTTGA+GGG - Chr2:22287272-22287291 None:intergenic 30.0%
! AAATTTAATCAGGGAAGTGT+CGG + Chr2:22286273-22286292 MsG0280007883.01.T01:intron 30.0%
! AAGAAGTATAAACAGCCTTT+GGG - Chr2:22286179-22286198 None:intergenic 30.0%
! AAGCTTTTAGTCTCTTTTCT+TGG + Chr2:22286402-22286421 MsG0280007883.01.T01:intron 30.0%
! ATATATCTTAGCATTTGGTG+TGG + Chr2:22286774-22286793 MsG0280007883.01.T01:intron 30.0%
! ATCACACGTTGATTATTTCT+TGG + Chr2:22284268-22284287 MsG0280007883.01.T01:intron 30.0%
! ATGGTCTTGAATTTATCTTG+TGG + Chr2:22289086-22289105 MsG0280007883.01.T01:intron 30.0%
! ATTATTTCTTGGCTCCTAAA+TGG + Chr2:22284279-22284298 MsG0280007883.01.T01:intron 30.0%
! ATTCAACAAAAAGGCATACT+AGG - Chr2:22284709-22284728 None:intergenic 30.0%
! GAAAATTTAGTCTTCAACCT+TGG - Chr2:22284542-22284561 None:intergenic 30.0%
! GATGAAAAAAAAGAGTACGT+TGG - Chr2:22287554-22287573 None:intergenic 30.0%
! TATATTGGTTGTCTAGTTTC+TGG + Chr2:22287640-22287659 MsG0280007883.01.T01:intron 30.0%
! TGCCTCATTTAAAATGCATT+TGG - Chr2:22288735-22288754 None:intergenic 30.0%
! TTCAACAAAAAGGCATACTA+GGG - Chr2:22284708-22284727 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - Chr2:22288851-22288870 None:intergenic 30.0%
! TTTATCAATACTGCCCATTT+TGG - Chr2:22284996-22285015 None:intergenic 30.0%
! TTTTCATCATAGGCTTACTT+TGG - Chr2:22289265-22289284 None:intergenic 30.0%
!! AAAAGCATCAAGTGAACTAA+TGG - Chr2:22289980-22289999 None:intergenic 30.0%
!! AAATGGGCAGTATTGATAAA+AGG + Chr2:22284996-22285015 MsG0280007883.01.T01:intron 30.0%
!! ATAATGTTTTTGCACGAGTT+AGG + Chr2:22284357-22284376 MsG0280007883.01.T01:intron 30.0%
!! ATCTTTCATCTTGCTTTTGT+GGG + Chr2:22287079-22287098 MsG0280007883.01.T01:intron 30.0%
!! CACTTGATGCTTTTGATTAT+TGG + Chr2:22289986-22290005 MsG0280007883.01.T01:three_prime_UTR 30.0%
!! CCAATATTTTTACAAAGTGC+AGG - Chr2:22285712-22285731 None:intergenic 30.0%
!! GATATCAAAGGCTTTTTCTT+TGG - Chr2:22289243-22289262 None:intergenic 30.0%
!! TATCTTTCATCTTGCTTTTG+TGG + Chr2:22287078-22287097 MsG0280007883.01.T01:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - Chr2:22288850-22288869 None:intergenic 30.0%
!! TGATGTTGATAATTACCTTG+TGG - Chr2:22286909-22286928 None:intergenic 30.0%
!! TTTGATTTTTGGACTTTGTG+TGG - Chr2:22286591-22286610 None:intergenic 30.0%
!!! ATTTCTTTTCCCTCTAAAGT+TGG - Chr2:22286525-22286544 None:intergenic 30.0%
!!! ATTTTTTGATTCAGCAGACT+GGG + Chr2:22289409-22289428 MsG0280007883.01.T01:CDS 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG - Chr2:22285931-22285950 None:intergenic 30.0%
!!! CGACAATACCCTAAATTTTT+TGG + Chr2:22284603-22284622 MsG0280007883.01.T01:intron 30.0%
!!! GGGACACTTTTTTTAGAAAA+TGG - Chr2:22288830-22288849 None:intergenic 30.0%
!!! TCTCTGCACTTTTTTTTGTT+TGG - Chr2:22285937-22285956 None:intergenic 30.0%
!!! TGTGAAAAGAGCATTTTTAG+AGG - Chr2:22282178-22282197 None:intergenic 30.0%
!!! TTTTGGTGTTAGAATCATGA+AGG - Chr2:22281807-22281826 None:intergenic 30.0%
AGAAAATGGGTCAGTTATTC+CGG - Chr2:22288816-22288835 None:intergenic 35.0%
AGGCTTACTTTGGATATCAA+AGG - Chr2:22289255-22289274 None:intergenic 35.0%
AGTCACTTAAAGGACATACA+AGG + Chr2:22288430-22288449 MsG0280007883.01.T01:intron 35.0%
ATTGGACACATGGAAATGAA+AGG - Chr2:22287727-22287746 None:intergenic 35.0%
ATTTATCACACATTCTGCCA+AGG + Chr2:22284522-22284541 MsG0280007883.01.T01:intron 35.0%
CAAAACAAAACAAGCCTAAC+TGG + Chr2:22288092-22288111 MsG0280007883.01.T01:intron 35.0%
CAAAGTTGTCAACTAAGACT+AGG - Chr2:22288645-22288664 None:intergenic 35.0%
CTAGGAAAGAAGCTACAAAA+TGG - Chr2:22286720-22286739 None:intergenic 35.0%
GGAATTTAATCTCTACAGCA+AGG + Chr2:22289518-22289537 MsG0280007883.01.T01:intron 35.0%
GGATAATGCATGTTATATGC+AGG - Chr2:22285532-22285551 None:intergenic 35.0%
GTAAATTAGTCAACATCCGT+GGG + Chr2:22289195-22289214 MsG0280007883.01.T01:intron 35.0%
GTACAAGTAATGTGCACAAT+TGG - Chr2:22287532-22287551 None:intergenic 35.0%
GTGAAAGAATTGTACGTTGA+GGG + Chr2:22286316-22286335 MsG0280007883.01.T01:intron 35.0%
GTTATGTACCTCAACGTTAT+TGG - Chr2:22287245-22287264 None:intergenic 35.0%
TAATGCATGTTATATGCAGG+GGG - Chr2:22285529-22285548 None:intergenic 35.0%
TAGATTCAACTATTGGCACA+AGG + Chr2:22289894-22289913 MsG0280007883.01.T01:three_prime_UTR 35.0%
TCATGTTTGTACCATGTACT+TGG + Chr2:22287572-22287591 MsG0280007883.01.T01:intron 35.0%
TCTACCTCTACTTTCATATG+AGG + Chr2:22286049-22286068 MsG0280007883.01.T01:intron 35.0%
TGTAAATTAGTCAACATCCG+TGG + Chr2:22289194-22289213 MsG0280007883.01.T01:intron 35.0%
TGTCTATCATACATGCATCT+AGG + Chr2:22287606-22287625 MsG0280007883.01.T01:intron 35.0%
TGTTGAATAGGTAAAGGAGA+TGG + Chr2:22287189-22287208 MsG0280007883.01.T01:intron 35.0%
TTGGACACATGGAAATGAAA+GGG - Chr2:22287726-22287745 None:intergenic 35.0%
TTTGGTGAGAATTGGGATTA+GGG - Chr2:22281931-22281950 None:intergenic 35.0%
! AAAACCATTGACTGTTGTGA+TGG + Chr2:22289067-22289086 MsG0280007883.01.T01:intron 35.0%
! CAAAATCTGATGAAAGTGCA+GGG - Chr2:22285983-22285964 None:intergenic 35.0%
! CAAGAAGTATAAACAGCCTT+TGG - Chr2:22286180-22286199 None:intergenic 35.0%
! CAATTGAAGTACCAAGTACA+TGG - Chr2:22287586-22287605 None:intergenic 35.0%
! CTGTCGGTTACAAAATTATG+TGG - Chr2:22284409-22284428 None:intergenic 35.0%
! TCTGCACTTTCATCAGATTT+TGG - Chr2:22285966-22285985 None:intergenic 35.0%
! TGTCGGTTAGAAAGTTCTAA+GGG + Chr2:22287999-22288018 MsG0280007883.01.T01:intron 35.0%
! TTGTCGGTTAGAAAGTTCTA+AGG + Chr2:22287998-22288017 MsG0280007883.01.T01:intron 35.0%
! TTTTGGTGAGAATTGGGATT+AGG - Chr2:22281932-22281951 None:intergenic 35.0%
!! AACGTACGTTTTTGGAGAAA+AGG - Chr2:22282089-22282108 None:intergenic 35.0%
!! ACATTGACTCACCATGTTAT+AGG + Chr2:22286131-22286150 MsG0280007883.01.T01:intron 35.0%
!! ACGTACGTTTTTGGAGAAAA+GGG - Chr2:22282088-22282107 None:intergenic 35.0%
!! ATCTTCTCTTGGCTTGATTT+TGG + Chr2:22287025-22287044 MsG0280007883.01.T01:intron 35.0%
!! CATACACCAATTGTTTTGCA+GGG + Chr2:22289867-22289886 MsG0280007883.01.T01:intron 35.0%
!! CATTTTAATCTCCTCTAACG+TGG + Chr2:22287423-22287442 MsG0280007883.01.T01:intron 35.0%
!! CTTTCATCAGATTTTGGCAT+TGG - Chr2:22285674-22285655 None:intergenic 35.0%
!! GAAAAAGCATTAGACTCTGT+TGG - Chr2:22289354-22289373 None:intergenic 35.0%
!! GTTGAGTTTTGGTGAGAATT+GGG - Chr2:22281938-22281957 None:intergenic 35.0%
!! GTTGATAATTACCTTGTGGT+GGG - Chr2:22286905-22286924 None:intergenic 35.0%
!! TCATACACCAATTGTTTTGC+AGG + Chr2:22289866-22289885 MsG0280007883.01.T01:intron 35.0%
!! TGTTGATAATTACCTTGTGG+TGG - Chr2:22286906-22286925 None:intergenic 35.0%
!!! CATTTTTTGATTCAGCAGAC+TGG + Chr2:22289408-22289427 MsG0280007883.01.T01:CDS 35.0%
!!! GACATGATTAGGTTGAGTTT+TGG - Chr2:22281949-22281968 None:intergenic 35.0%
AAAAGAGGAAGATGTGTGTG+TGG - Chr2:22284195-22284214 None:intergenic 40.0%
AAAGAGAGAAGAACAAGAGG+AGG - Chr2:22282053-22282072 None:intergenic 40.0%
AAAGAGGAAGATGTGTGTGT+GGG - Chr2:22284194-22284213 None:intergenic 40.0%
AAAGTGGAGACAATGAAGAG+AGG - Chr2:22286832-22286851 None:intergenic 40.0%
AAGAAGGCAGAAACGTGATT+TGG - Chr2:22284326-22284345 None:intergenic 40.0%
AAGACCATCACAACAGTCAA+TGG - Chr2:22289074-22289093 None:intergenic 40.0%
AAGGACATACAAGGATGACT+TGG + Chr2:22288439-22288458 MsG0280007883.01.T01:intron 40.0%
AAGGCATACTAGGGCAAAAA+TGG - Chr2:22284699-22284718 None:intergenic 40.0%
AATCGATGGCGATATCCTAA+CGG + Chr2:22286352-22286371 MsG0280007883.01.T01:intron 40.0%
ACGTTTCAGTGAGGAGAAAT+AGG - Chr2:22284577-22284596 None:intergenic 40.0%
ACTCACCATGTTATAGGAGA+TGG + Chr2:22286137-22286156 MsG0280007883.01.T01:intron 40.0%
AGAAGGCAGAAACGTGATTT+GGG - Chr2:22284325-22284344 None:intergenic 40.0%
AGGGGGAACCTCTATAAATA+AGG + Chr2:22282499-22282518 MsG0280007883.01.T01:intron 40.0%
ATATTATACGAGGAGAGGCT+AGG - Chr2:22286738-22286757 None:intergenic 40.0%
ATATTGGTATTAGTGCCACG+TGG + Chr2:22285805-22285824 MsG0280007883.01.T01:intron 40.0%
ATGTCGTAGTTTATGCCGTT+AGG - Chr2:22286370-22286389 None:intergenic 40.0%
ATTAAGACGGGCATTACAAG+AGG + Chr2:22282431-22282450 MsG0280007883.01.T01:intron 40.0%
CAGAAAGAGAGAAGAACAAG+AGG - Chr2:22282056-22282075 None:intergenic 40.0%
CGTGAAAGAATTGTACGTTG+AGG + Chr2:22286315-22286334 MsG0280007883.01.T01:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - Chr2:22288815-22288834 None:intergenic 40.0%
GAACTCCATCTCCTATAACA+TGG - Chr2:22286145-22286164 None:intergenic 40.0%
GAATAAGATACGTGCACATG+TGG + Chr2:22287502-22287521 MsG0280007883.01.T01:intron 40.0%
GAGCTTAGCTCACTTGATAA+AGG - Chr2:22285553-22285572 None:intergenic 40.0%
GCATAAACTACGACATCCAA+TGG + Chr2:22286374-22286393 MsG0280007883.01.T01:intron 40.0%
GCTCATGTTTGGGAGAAATA+AGG - Chr2:22288147-22288166 None:intergenic 40.0%
GGGAGAGTAGATTCAACTAT+TGG + Chr2:22289887-22289906 MsG0280007883.01.T01:intron 40.0%
TACTCTCCCTGCAAAACAAT+TGG - Chr2:22289876-22289895 None:intergenic 40.0%
TCGTGCAACTTGAAAGGATT+CGG - Chr2:22284487-22284506 None:intergenic 40.0%
TCGTTACAAACGTTTCAGTG+AGG - Chr2:22284586-22284605 None:intergenic 40.0%
TGGACACATGGAAATGAAAG+GGG - Chr2:22287725-22287744 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + Chr2:22289005-22289024 MsG0280007883.01.T01:intron 40.0%
TTATGCTGCCAATAACGTTG+AGG + Chr2:22287234-22287253 MsG0280007883.01.T01:CDS 40.0%
TTCTTATGTGTAGTAGGGAG+AGG - Chr2:22288263-22288282 None:intergenic 40.0%
! AAACAGATGAGTTGAGGGTT+AGG - Chr2:22287267-22287286 None:intergenic 40.0%
! AAACGTGATTTGGGAAGGTT+AGG - Chr2:22284316-22284335 None:intergenic 40.0%
! ACACATCTTCCTCTTTTCAC+TGG + Chr2:22284198-22284217 MsG0280007883.01.T01:intron 40.0%
! CACATCTTCCTCTTTTCACT+GGG + Chr2:22284199-22284218 MsG0280007883.01.T01:intron 40.0%
! CCAAAATCTGATGAAAGTGC+AGG - Chr2:22285982-22285963 None:intergenic 40.0%
! CCTGCACTTTCATCAGATTT+TGG + Chr2:22285649-22285668 MsG0280007883.01.T01:intron 40.0%
! TTAGGCAGAACGTACGTTTT+TGG - Chr2:22282097-22282116 None:intergenic 40.0%
!! GGTTGAGTTTTGGTGAGAAT+TGG - Chr2:22281939-22281958 None:intergenic 40.0%
!! GTCGGTTAGAAAGTTCTAAG+GGG + Chr2:22288000-22288019 MsG0280007883.01.T01:intron 40.0%
AAACAAGCCTAACTGGCTGT+AGG + Chr2:22288099-22288118 MsG0280007883.01.T01:intron 45.0%
AACAAGCCTAACTGGCTGTA+GGG + Chr2:22288100-22288119 MsG0280007883.01.T01:intron 45.0%
AAGAGGAAGATGTGTGTGTG+GGG - Chr2:22284193-22284212 None:intergenic 45.0%
AAGTTAGTCGCACCCTTATC+TGG + Chr2:22282007-22282026 MsG0280007883.01.T01:intron 45.0%
AATCAACCAGATGTGCATGC+AGG - Chr2:22289753-22289772 None:intergenic 45.0%
ACATTAGTTCGCCACGTTAG+AGG - Chr2:22287437-22287456 None:intergenic 45.0%
AGGAATGACCTGAGCCATTT+AGG - Chr2:22284296-22284315 None:intergenic 45.0%
ATGTGCATGCAGGTCTTCTT+GGG - Chr2:22289743-22289762 None:intergenic 45.0%
CAGTGAGGAGAAATAGGACA+AGG - Chr2:22284571-22284590 None:intergenic 45.0%
GAAGAGAGGTTTGAGTGAGA+AGG - Chr2:22286818-22286837 None:intergenic 45.0%
GCCATGAGAAGCTCATGTTT+GGG - Chr2:22288157-22288176 None:intergenic 45.0%
GGACCATGATGTGCCAAAAT+GGG + Chr2:22284980-22284999 MsG0280007883.01.T01:intron 45.0%
GTATGAGATGGACCAATCGA+TGG + Chr2:22286338-22286357 MsG0280007883.01.T01:intron 45.0%
GTTAGGATATCGCCATCGAT+TGG - Chr2:22286353-22286372 None:intergenic 45.0%
GTTCATTCTGCTCAACCCAA+AGG + Chr2:22286161-22286180 MsG0280007883.01.T01:intron 45.0%
GTTTAGCACCCAGTGAAAAG+AGG - Chr2:22284210-22284229 None:intergenic 45.0%
TAATCTCTACAGCAAGGTGC+TGG + Chr2:22289524-22289543 MsG0280007883.01.T01:intron 45.0%
TCCCAAACATGAGCTTCTCA+TGG + Chr2:22288153-22288172 MsG0280007883.01.T01:intron 45.0%
TGCCATGAGAAGCTCATGTT+TGG - Chr2:22288158-22288177 None:intergenic 45.0%
! GACATACAAGGATGACTTGG+TGG + Chr2:22288442-22288461 MsG0280007883.01.T01:intron 45.0%
! GATGAAAGTGCAGGGACTAA+AGG - Chr2:22285643-22285662 None:intergenic 45.0%
! TGTACGTTGAGGGTATGAGA+TGG + Chr2:22286326-22286345 MsG0280007883.01.T01:intron 45.0%
!! TTATAAAATCATATATTTAT+TGG - Chr2:22287745-22287764 None:intergenic 5.0%
!!! TTTTTTAAAATTAAGAAAAA+AGG + Chr2:22287931-22287950 MsG0280007883.01.T01:intron 5.0%
ACATCCGTGGGCAAGAAGTA+TGG + Chr2:22289207-22289226 MsG0280007883.01.T01:CDS 50.0%
ACCCCTAGCGAGAACGAAAA+GGG + Chr2:22282480-22282499 MsG0280007883.01.T01:intron 50.0%
AGAAGACCTGCATGCACATC+TGG + Chr2:22289744-22289763 MsG0280007883.01.T01:CDS 50.0%
AGAGGAAGATGTGTGTGTGG+GGG - Chr2:22284192-22284211 None:intergenic 50.0%
AGCAGACTGGGCATTATGCA+AGG + Chr2:22289421-22289440 MsG0280007883.01.T01:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - Chr2:22288811-22288830 None:intergenic 50.0%
CAATGTGTGTTGCGCACTGT+CGG - Chr2:22284425-22284444 None:intergenic 50.0%
CCACGTGGCGTGAAATGATT+GGG + Chr2:22285820-22285839 MsG0280007883.01.T01:intron 50.0%
GATGTGCATGCAGGTCTTCT+TGG - Chr2:22289744-22289763 None:intergenic 50.0%
GGGACCATGATGTGCCAAAA+TGG + Chr2:22284979-22284998 MsG0280007883.01.T01:intron 50.0%
TACCCCTAGCGAGAACGAAA+AGG + Chr2:22282479-22282498 MsG0280007883.01.T01:intron 50.0%
TCAAGTGAGCTAAGCTCACG+TGG + Chr2:22285556-22285575 MsG0280007883.01.T01:intron 50.0%
TCGCAACATGCGATGCACAA+AGG - Chr2:22284449-22284468 None:intergenic 50.0%
TCTTGGCTCCTAAATGGCTC+AGG + Chr2:22284285-22284304 MsG0280007883.01.T01:intron 50.0%
TGCACGTCGTGCAACTTGAA+AGG - Chr2:22284493-22284512 None:intergenic 50.0%
TGTGCATGCAGGTCTTCTTG+GGG - Chr2:22289742-22289761 None:intergenic 50.0%
TTATTGCTCGCAATGGCGAG+TGG + Chr2:22281637-22281656 MsG0280007883.01.T01:CDS 50.0%
! AAAACTAACGGAGTGCCACG+TGG - Chr2:22285846-22285865 None:intergenic 50.0%
! ATTACCTTGTGGTGGGAGCA+AGG - Chr2:22286898-22286917 None:intergenic 50.0%
! GGCAGAAACGTGATTTGGGA+AGG - Chr2:22284321-22284340 None:intergenic 50.0%
!! CAAGGATGACTTGGTGGCTA+TGG + Chr2:22288448-22288467 MsG0280007883.01.T01:intron 50.0%
!! CTGCCCATTTTGGCACATCA+TGG - Chr2:22284986-22285005 None:intergenic 50.0%
!!! TACCTGTAGTTTTGGCCGCA+GGG - Chr2:22289582-22289601 None:intergenic 50.0%
AACTACTACTCCCTCCGTCC+CGG + Chr2:22288794-22288813 MsG0280007883.01.T01:intron 55.0%
AGCGATGACAGTTCAGGCTC+GGG + Chr2:22281750-22281769 MsG0280007883.01.T01:intron 55.0%
AGGAAGATGTGTGTGTGGGG+GGG - Chr2:22284190-22284209 None:intergenic 55.0%
CCCAATCATTTCACGCCACG+TGG - Chr2:22285823-22285842 None:intergenic 55.0%
CCCACCATACTTCTTGCCCA+CGG - Chr2:22289214-22289233 None:intergenic 55.0%
CCCCTAGCGAGAACGAAAAG+GGG + Chr2:22282481-22282500 MsG0280007883.01.T01:intron 55.0%
CCCTAGCGAGAACGAAAAGG+GGG + Chr2:22282482-22282501 MsG0280007883.01.T01:intron 55.0%
CGACAGTGCGCAACACACAT+TGG + Chr2:22284423-22284442 MsG0280007883.01.T01:intron 55.0%
CGTGAAATGATTGGGCCACG+TGG + Chr2:22285828-22285847 MsG0280007883.01.T01:intron 55.0%
GAGCGATGACAGTTCAGGCT+CGG + Chr2:22281749-22281768 MsG0280007883.01.T01:intron 55.0%
GAGGAAGATGTGTGTGTGGG+GGG - Chr2:22284191-22284210 None:intergenic 55.0%
GCCACGTGGCGTGAAATGAT+TGG + Chr2:22285819-22285838 MsG0280007883.01.T01:intron 55.0%
GCGAGGGTTATTGCTCGCAA+TGG + Chr2:22281630-22281649 MsG0280007883.01.T01:CDS 55.0%
GGGGGTGATTGTATTCACGC+AGG - Chr2:22285511-22285530 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr2:22288807-22288826 None:intergenic 55.0%
GTGCATGCAGGTCTTCTTGG+GGG - Chr2:22289741-22289760 None:intergenic 55.0%
GTTGCGAGCGATGACAGTTC+AGG + Chr2:22281744-22281763 MsG0280007883.01.T01:intron 55.0%
TCTACCTTGCTCCCACCACA+AGG + Chr2:22286891-22286910 MsG0280007883.01.T01:intron 55.0%
TGACAGCCCTACAGCCAGTT+AGG - Chr2:22288109-22288128 None:intergenic 55.0%
! CCCCCTTTTCGTTCTCGCTA+GGG - Chr2:22282485-22282504 None:intergenic 55.0%
! CCCCTTTTCGTTCTCGCTAG+GGG - Chr2:22282484-22282503 None:intergenic 55.0%
! CCGTGGGCAAGAAGTATGGT+GGG + Chr2:22289211-22289230 MsG0280007883.01.T01:CDS 55.0%
! CTCAATGGTCTAGCTCGCAG+TGG + Chr2:22281608-22281627 MsG0280007883.01.T01:CDS 55.0%
! GCGAGTAACTTGGCTCGTAG+TGG + Chr2:22281581-22281600 MsG0280007883.01.T01:CDS 55.0%
! TCCCCCTTTTCGTTCTCGCT+AGG - Chr2:22282486-22282505 None:intergenic 55.0%
! TCCGTGGGCAAGAAGTATGG+TGG + Chr2:22289210-22289229 MsG0280007883.01.T01:CDS 55.0%
! TTTTGGCCGCAGGGTCTCTA+CGG - Chr2:22289573-22289592 None:intergenic 55.0%
!!! GTACCTGTAGTTTTGGCCGC+AGG - Chr2:22289583-22289602 None:intergenic 55.0%
AAGATGTGTGTGTGGGGGGG+GGG - Chr2:22284187-22284206 None:intergenic 60.0%
CTTGGGGGAAGCTGCTGATG+TGG - Chr2:22289726-22289745 None:intergenic 60.0%
GAAGATGTGTGTGTGGGGGG+GGG - Chr2:22284188-22284207 None:intergenic 60.0%
GACCCTGCGGCCAAAACTAC+AGG + Chr2:22289577-22289596 MsG0280007883.01.T01:CDS 60.0%
GCTCGTAGTGGCGAGCTCAA+TGG + Chr2:22281593-22281612 MsG0280007883.01.T01:CDS 60.0%
GGAAGATGTGTGTGTGGGGG+GGG - Chr2:22284189-22284208 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr2:22288808-22288827 None:intergenic 60.0%
TTGCTCGCAATGGCGAGTGG+TGG + Chr2:22281640-22281659 MsG0280007883.01.T01:CDS 60.0%
!! GAGTGGTGGCTTGCTCGCAA+TGG + Chr2:22281654-22281673 MsG0280007883.01.T01:CDS 60.0%
AGATGTGTGTGTGGGGGGGG+GGG - Chr2:22284186-22284205 None:intergenic 65.0%
CAGCAGCCGTAGAGACCCTG+CGG + Chr2:22289564-22289583 MsG0280007883.01.T01:CDS 65.0%
CAGTGGCGAGCAGTCTGGGT+TGG + Chr2:22281693-22281712 MsG0280007883.01.T01:CDS 65.0%
CTCGCAGTGGCGAGCAGTCT+GGG + Chr2:22281689-22281708 MsG0280007883.01.T01:CDS 65.0%
GCGAGCGATTCTGCTCGCAG+TGG + Chr2:22281676-22281695 MsG0280007883.01.T01:CDS 65.0%
! GGTCTAGCTCGCAGTGGCGA+GGG + Chr2:22281614-22281633 MsG0280007883.01.T01:CDS 65.0%
! TGGTCTAGCTCGCAGTGGCG+AGG + Chr2:22281613-22281632 MsG0280007883.01.T01:CDS 65.0%
ATGTGTGTGTGGGGGGGGGG+GGG - Chr2:22284184-22284203 None:intergenic 70.0%
GATGTGTGTGTGGGGGGGGG+GGG - Chr2:22284185-22284204 None:intergenic 70.0%
GCTCGCAGTGGCGAGCAGTC+TGG + Chr2:22281688-22281707 MsG0280007883.01.T01:CDS 70.0%
TGTGTGTGTGGGGGGGGGGG+GGG - Chr2:22284183-22284202 None:intergenic 75.0%
! GTGTGTGTGGGGGGGGGGGG+GGG - Chr2:22284182-22284201 None:intergenic 80.0%
! TGTGTGTGGGGGGGGGGGGG+GGG - Chr2:22284181-22284200 None:intergenic 80.0%
! GTGTGTGGGGGGGGGGGGGG+GGG - Chr2:22284180-22284199 None:intergenic 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG - Chr2:22284179-22284198 None:intergenic 85.0%
! GTGTGGGGGGGGGGGGGGGG+GGG - Chr2:22284178-22284197 None:intergenic 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG - Chr2:22284177-22284196 None:intergenic 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - Chr2:22284176-22284195 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - Chr2:22284175-22284194 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr2 gene 22281578 22290046 22281578 ID=MsG0280007883.01;Name=MsG0280007883.01
Chr2 mRNA 22281578 22290046 22281578 ID=MsG0280007883.01.T01;Parent=MsG0280007883.01;Name=MsG0280007883.01.T01;_AED=0.50;_eAED=0.62;_QI=0|0.83|0.71|1|0|0.28|7|180|142
Chr2 exon 22281578 22281721 22281578 ID=MsG0280007883.01.T01:exon:18255;Parent=MsG0280007883.01.T01
Chr2 exon 22287199 22287255 22287199 ID=MsG0280007883.01.T01:exon:18256;Parent=MsG0280007883.01.T01
Chr2 exon 22289204 22289266 22289204 ID=MsG0280007883.01.T01:exon:18257;Parent=MsG0280007883.01.T01
Chr2 exon 22289395 22289442 22289395 ID=MsG0280007883.01.T01:exon:18258;Parent=MsG0280007883.01.T01
Chr2 exon 22289536 22289598 22289536 ID=MsG0280007883.01.T01:exon:18259;Parent=MsG0280007883.01.T01
Chr2 exon 22289717 22289791 22289717 ID=MsG0280007883.01.T01:exon:18260;Parent=MsG0280007883.01.T01
Chr2 exon 22289888 22290046 22289888 ID=MsG0280007883.01.T01:exon:18261;Parent=MsG0280007883.01.T01
Chr2 CDS 22281578 22281721 22281578 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 CDS 22287199 22287255 22287199 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 CDS 22289204 22289266 22289204 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 CDS 22289395 22289442 22289395 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 CDS 22289536 22289598 22289536 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 CDS 22289717 22289770 22289717 ID=MsG0280007883.01.T01:cds;Parent=MsG0280007883.01.T01
Chr2 three_prime_UTR 22289771 22289791 22289771 ID=MsG0280007883.01.T01:three_prime_utr;Parent=MsG0280007883.01.T01
Chr2 three_prime_UTR 22289888 22290046 22289888 ID=MsG0280007883.01.T01:three_prime_utr;Parent=MsG0280007883.01.T01
Gene Sequence

>MsG0280007883.01.T01

ATGGCGAGTAACTTGGCTCGTAGTGGCGAGCTCAATGGTCTAGCTCGCAGTGGCGAGGGTTATTGCTCGCAATGGCGAGTGGTGGCTTGCTCGCAATGGCGAGCGATTCTGCTCGCAGTGGCGAGCAGTCTGGGTTGGCTCGCAGTAAAGGAGATGGCAGAGTTTAACAGAGAAGAATATTATGCTGCCAATAACGTTGAGTCAACATCCGTGGGCAAGAAGTATGGTGGGCTTGTCCCAAAGAAAAAGCCTTTGATATCCAAAGATAATGAAAGGGCATTTTTTGATTCAGCAGACTGGGCATTATGCAAGCAAGGTGCTGGAATGAATCAACAATCTACAGCAGCCGTAGAGACCCTGCGGCCAAAACTACAGAGAACTCCACATCAGCAGCTTCCCCCAAGAAGACCTGCATGCACATCTGGTTGA
Protein sequence

>MsG0280007883.01.T01

MASNLARSGELNGLARSGEGYCSQWRVVACSQWRAILLAVASSLGWLAVKEMAEFNREEYYAANNVESTSVGKKYGGLVPKKKPLISKDNERAFFDSADWALCKQGAGMNQQSTAAVETLRPKLQRTPHQQLPPRRPACTSG*