AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009981.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009981.01.T01 MTR_2g075410 93.043 345 2 1 1 345 1 323 0.0 647
MsG0280009981.01.T01 MTR_2g075410 100.000 236 0 0 110 345 1 236 1.13e-171 476
MsG0280009981.01.T01 MTR_2g075400 69.565 345 76 2 1 345 1 316 4.82e-144 417
MsG0280009981.01.T01 MTR_1g021990 36.152 343 108 12 6 345 14 248 3.07e-37 134
MsG0280009981.01.T01 MTR_3g111680 39.155 355 148 15 3 343 12 312 3.59e-31 120
MsG0280009981.01.T01 MTR_5g019550 37.709 358 159 12 6 343 9 322 1.69e-28 113
MsG0280009981.01.T01 MTR_5g026210 43.333 90 48 1 17 103 61 150 1.82e-15 77.4
MsG0280009981.01.T01 MTR_5g026210 43.333 90 48 1 17 103 61 150 2.88e-15 77.4
MsG0280009981.01.T01 MTR_5g026210 58.621 58 24 0 17 74 61 118 2.94e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009981.01.T01 AT1G78700 65.352 355 83 8 1 345 1 325 8.80e-127 366
MsG0280009981.01.T01 AT4G18890 57.714 350 77 10 1 345 1 284 6.04e-98 291
MsG0280009981.01.T01 AT4G18890 52.988 251 69 9 100 345 2 208 2.51e-63 201
MsG0280009981.01.T01 AT1G75080 38.083 386 120 15 6 345 23 335 1.67e-41 148
MsG0280009981.01.T01 AT1G75080 38.083 386 120 15 6 345 23 335 1.67e-41 148
MsG0280009981.01.T01 AT1G19350 38.802 384 116 16 6 343 44 354 7.77e-40 144
MsG0280009981.01.T01 AT1G19350 38.542 384 117 16 6 343 22 332 9.63e-40 143
MsG0280009981.01.T01 AT1G19350 38.542 384 117 16 6 343 22 332 9.63e-40 143
MsG0280009981.01.T01 AT1G19350 38.542 384 117 16 6 343 22 332 9.63e-40 143
MsG0280009981.01.T01 AT1G19350 38.542 384 117 16 6 343 22 332 9.63e-40 143
MsG0280009981.01.T01 AT3G50750 39.655 348 105 11 6 340 14 269 3.41e-36 132
MsG0280009981.01.T01 AT4G36780 46.491 228 94 6 6 233 16 215 1.35e-29 114
MsG0280009981.01.T01 AT5G45300 37.984 129 75 2 17 140 97 225 3.40e-15 77.0
MsG0280009981.01.T01 AT5G45300 37.405 131 75 2 17 140 111 241 7.07e-15 76.3
MsG0280009981.01.T01 AT5G45300 37.405 131 75 2 17 140 97 227 8.47e-15 75.9
MsG0280009981.01.T01 AT2G45880 56.667 60 26 0 11 70 74 133 1.23e-14 75.5

Find 143 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGACCCAGATTGGTTTGC+TGG 0.249683 2:-62284163 MsG0280009981.01.T01:CDS
CTACTAATCCATTTGGCTTC+AGG 0.251618 2:-62284090 MsG0280009981.01.T01:CDS
GCGTTTGAAGGAGTTGAATT+TGG 0.275826 2:+62287384 None:intergenic
CCTCCCAGTCAGCTTTCCTC+TGG 0.324519 2:+62284269 None:intergenic
GAGAGGATCCATGAAGATTC+TGG 0.328306 2:-62283890 MsG0280009981.01.T01:CDS
CACTACTTACCTGGTCTTTG+AGG 0.341054 2:+62283838 None:intergenic
CTGATCCCAGCAAACCAATC+TGG 0.350204 2:+62284157 None:intergenic
AGGGAATTTCCATCACCATT+AGG 0.370323 2:+62284427 None:intergenic
CATCTGATCCAGAATCTTCA+TGG 0.372743 2:+62283882 None:intergenic
GCTGCGTTTAATGTTACTTT+TGG 0.380053 2:-62286529 MsG0280009981.01.T01:CDS
GCATGGGATGAGCGCGGGCT+AGG 0.380817 2:+62284457 None:intergenic
TTCTCCGGTTTGAGAATGTA+TGG 0.382953 2:-62287126 MsG0280009981.01.T01:CDS
CAGATTGGTTTGCTGGGATC+AGG 0.383352 2:-62284156 MsG0280009981.01.T01:CDS
TACTAATCCATTTGGCTTCA+GGG 0.383377 2:-62284089 MsG0280009981.01.T01:CDS
CTCCCAGTCAGCTTTCCTCT+GGG 0.391858 2:+62284270 None:intergenic
AAGGAAGAAGAGCCAGGACT+TGG 0.403188 2:+62284481 None:intergenic
GAGGATCAGTCTACTCGTCC+TGG 0.410691 2:-62284250 MsG0280009981.01.T01:CDS
CTAGTCGCTACTAATCCATT+TGG 0.412992 2:-62284097 MsG0280009981.01.T01:CDS
AGAGCCAGGACTTGGGTTGT+AGG 0.415820 2:+62284489 None:intergenic
ATTTCAGATGAATTTGCCTT+TGG 0.420372 2:-62283950 MsG0280009981.01.T01:CDS
TCTACTCGTCCTGGGTGGGG+TGG 0.421075 2:-62284241 MsG0280009981.01.T01:CDS
CTACTCGTCCTGGGTGGGGT+GGG 0.424088 2:-62284240 MsG0280009981.01.T01:CDS
TGGAAGCAGTGCAGTTGGTT+TGG 0.426703 2:-62283930 MsG0280009981.01.T01:CDS
TACAAAACGACTGCGTTTGA+AGG 0.431915 2:+62287372 None:intergenic
GAGCTAAGTGGAGGAGTGAC+AGG 0.433832 2:+62284310 None:intergenic
AGAATAACAAGAGGAGAGAG+AGG 0.437244 2:-62287176 MsG0280009981.01.T01:CDS
TCATTGTTGTCGCAATGTTT+CGG 0.441488 2:+62287090 None:intergenic
AATATATAGCTGGGGAAGCT+TGG 0.443626 2:+62284354 None:intergenic
ATTTGGAAGAAATTGAGAAC+GGG 0.448456 2:+62287401 None:intergenic
TTGACCCAGATTGGTTTGCT+GGG 0.448546 2:-62284162 MsG0280009981.01.T01:CDS
ACCAATCTGGGTCAAGAACT+TGG 0.450542 2:+62284170 None:intergenic
ACCTCTTCCCTGAAGCCAAA+TGG 0.452419 2:+62284082 None:intergenic
TCCCATGCTGTAAATCCTAA+TGG 0.453038 2:-62284442 MsG0280009981.01.T01:CDS
ATTATGTGTATCTAGGTGTT+TGG 0.453708 2:-62286586 MsG0280009981.01.T01:intron
GCCAAGTTCTTGACCCAGAT+TGG 0.457814 2:-62284171 MsG0280009981.01.T01:CDS
AGCACTTTGAAGATTTGAAT+CGG 0.457816 2:+62287330 None:intergenic
TAGGAGGAGTGGAGGAAGGC+TGG 0.458194 2:+62284203 None:intergenic
TGTTCTCCAGCTTTAGCTGC+AGG 0.458482 2:-62284010 MsG0280009981.01.T01:CDS
TCCTCCACTCCTCCTAGCCC+TGG 0.459964 2:-62284196 MsG0280009981.01.T01:CDS
GAACATGTCCCACTTTGTCC+AGG 0.469503 2:+62284028 None:intergenic
GGGTCAAGAACTTGGCGACC+AGG 0.476781 2:+62284178 None:intergenic
AAATGTTGTCACTACTTACC+TGG 0.479319 2:+62283829 None:intergenic
AGCCAGTGTGAATATATAGC+TGG 0.480859 2:+62284344 None:intergenic
TCCATTTGGCTTCAGGGAAG+AGG 0.483652 2:-62284083 MsG0280009981.01.T01:CDS
CTCTGGGGTGATCGAGCAGT+TGG 0.483752 2:+62284286 None:intergenic
AGAACTTGGCGACCAGGGCT+AGG 0.484854 2:+62284184 None:intergenic
AGTTGGTTTGGTGAAGCCTT+GGG 0.485013 2:-62283918 MsG0280009981.01.T01:CDS
GGATCAGGATGCCCCACAGC+GGG 0.486389 2:-62284141 MsG0280009981.01.T01:CDS
GCCTTTGGAAGCAGTGCAGT+TGG 0.487429 2:-62283935 MsG0280009981.01.T01:CDS
CACCCCAGAGGAAAGCTGAC+TGG 0.487819 2:-62284273 MsG0280009981.01.T01:CDS
GCGGAACGCATGGATGTGAT+AGG 0.488603 2:-62284565 MsG0280009981.01.T01:CDS
AGGAGAAGTTTGCCCGCTGT+GGG 0.488942 2:+62284129 None:intergenic
CATGGGATGAGCGCGGGCTA+GGG 0.493897 2:+62284458 None:intergenic
TCAGAGCCTGCAGCTAAAGC+TGG 0.499118 2:+62284004 None:intergenic
GATTCCCGCATGTGGACCCC+TGG 0.499359 2:-62284046 MsG0280009981.01.T01:CDS
ATGCAAGCCTGCGGAACGCA+TGG 0.500040 2:-62284575 MsG0280009981.01.T01:CDS
AAAGCTCTTTGTAATGAAGC+TGG 0.501704 2:-62287060 MsG0280009981.01.T01:CDS
CTCTTTGTAATGAAGCTGGT+TGG 0.502741 2:-62287056 MsG0280009981.01.T01:CDS
ACTTGGGTTGTAGGAAGCAC+AGG 0.505215 2:+62284498 None:intergenic
GCTTCCTACAACCCAAGTCC+TGG 0.505291 2:-62284493 MsG0280009981.01.T01:CDS
GATGATTTAGAGCTCACTCT+TGG 0.505956 2:-62283863 MsG0280009981.01.T01:CDS
TGGATCCTCTCTCCTTCCCA+AGG 0.506658 2:+62283902 None:intergenic
CAGTTGGTTTGGTGAAGCCT+TGG 0.507522 2:-62283919 MsG0280009981.01.T01:CDS
TCAGTCTACTCGTCCTGGGT+GGG 0.507843 2:-62284245 MsG0280009981.01.T01:CDS
GCGACCAGGGCTAGGAGGAG+TGG 0.508618 2:+62284192 None:intergenic
TTACGATACGTTGTACCATC+AGG 0.508951 2:+62287024 None:intergenic
GGATGAGCGCGGGCTAGGGA+AGG 0.515742 2:+62284462 None:intergenic
GTTCCCATACATTCTCAAAC+CGG 0.515743 2:+62287122 None:intergenic
ACCCCAGAGGAAAGCTGACT+GGG 0.516090 2:-62284272 MsG0280009981.01.T01:CDS
TCGAGATGACGTCGGGGACG+AGG 0.516345 2:-62287221 MsG0280009981.01.T01:exon
CAGTCTACTCGTCCTGGGTG+GGG 0.517746 2:-62284244 MsG0280009981.01.T01:CDS
CTAGGGAAGGAAGAAGAGCC+AGG 0.519399 2:+62284475 None:intergenic
ATCACATCCATGCGTTCCGC+AGG 0.519528 2:+62284568 None:intergenic
AGGAGTGACAGGAGCACTGA+TGG 0.525130 2:+62284321 None:intergenic
TGATCCCAGCAAACCAATCT+GGG 0.525877 2:+62284158 None:intergenic
CACCATTAGGATTTACAGCA+TGG 0.525920 2:+62284440 None:intergenic
GTGATAGGTGGTTCTGCAAT+GGG 0.525969 2:-62284550 MsG0280009981.01.T01:CDS
TCTGAAATAGCTTCAGACAT+TGG 0.527497 2:+62283965 None:intergenic
GCCAGTGTGAATATATAGCT+GGG 0.527684 2:+62284345 None:intergenic
TTGTCCAGGGGTCCACATGC+GGG 0.536824 2:+62284042 None:intergenic
AGTTAACAGTGAATGTTGAC+CGG 0.541837 2:+62287478 None:intergenic
TAGGAGAAGTTTGCCCGCTG+TGG 0.548726 2:+62284128 None:intergenic
GGGCTAGGAGGAGTGGAGGA+AGG 0.549534 2:+62284199 None:intergenic
AGGATCAGTCTACTCGTCCT+GGG 0.551485 2:-62284249 MsG0280009981.01.T01:CDS
AATTTGGAAGAAATTGAGAA+CGG 0.555130 2:+62287400 None:intergenic
ATGGAAATTCCCTCATTCCA+TGG 0.555829 2:-62284417 MsG0280009981.01.T01:CDS
TTCTCTCTCTCCTTCCACGT+TGG 0.560859 2:+62287195 None:intergenic
GCTGTAAATCCTAATGGTGA+TGG 0.562331 2:-62284436 MsG0280009981.01.T01:CDS
TAGCTGGGGAAGCTTGGAAG+AGG 0.564442 2:+62284360 None:intergenic
CATTCACTGTTAACTAACTC+CGG 0.565071 2:-62287470 MsG0280009981.01.T01:five_prime_UTR
ACCAGGGCTAGGAGGAGTGG+AGG 0.565432 2:+62284195 None:intergenic
ATAGCAGCGAAGATCTTCTC+CGG 0.568682 2:-62287141 MsG0280009981.01.T01:CDS
GACGAGGCAACCAACGTGGA+AGG 0.571428 2:-62287205 MsG0280009981.01.T01:CDS
ATCAGTCTACTCGTCCTGGG+TGG 0.572626 2:-62284246 MsG0280009981.01.T01:CDS
TTTGTCCAGGGGTCCACATG+CGG 0.572765 2:+62284041 None:intergenic
AACATGTCCCACTTTGTCCA+GGG 0.573471 2:+62284029 None:intergenic
CGAGCAGTTGGAGAGCTAAG+TGG 0.574747 2:+62284298 None:intergenic
ACCATTAGGATTTACAGCAT+GGG 0.576979 2:+62284441 None:intergenic
ACGTGAGGTGGTTACTTCGC+CGG 0.577792 2:+62287451 None:intergenic
TCTCCGGTTTGAGAATGTAT+GGG 0.580133 2:-62287125 MsG0280009981.01.T01:CDS
AGGAAGAAGAGCCAGGACTT+GGG 0.580376 2:+62284482 None:intergenic
CAAATGGATTAGTAGCGACT+AGG 0.580823 2:+62284098 None:intergenic
ACCAACTGCACTGCTTCCAA+AGG 0.582208 2:+62283934 None:intergenic
TCCCAGTCAGCTTTCCTCTG+GGG 0.589485 2:+62284271 None:intergenic
TTACAGCATGGGATGAGCGC+GGG 0.592384 2:+62284452 None:intergenic
TGTGATAGGTGGTTCTGCAA+TGG 0.592423 2:-62284551 MsG0280009981.01.T01:CDS
GGTTGGATCGTTGAGCCTGA+TGG 0.594077 2:-62287039 MsG0280009981.01.T01:CDS
ATGTGGACCCCTGGACAAAG+TGG 0.596230 2:-62284037 MsG0280009981.01.T01:CDS
GGTCAAGAACTTGGCGACCA+GGG 0.596349 2:+62284179 None:intergenic
GGTTTGGTGAAGCCTTGGGA+AGG 0.598437 2:-62283914 MsG0280009981.01.T01:CDS
TGATGGTACAACGTATCGTA+AGG 0.599548 2:-62287022 MsG0280009981.01.T01:intron
GGAGAAGTTTGCCCGCTGTG+GGG 0.600569 2:+62284130 None:intergenic
AGGAGAGAGAGAATAACAAG+AGG 0.603214 2:-62287185 MsG0280009981.01.T01:CDS
TGAAGCCTTGGGAAGGAGAG+AGG 0.605206 2:-62283907 MsG0280009981.01.T01:CDS
CTCTTGGTACCTCAAAGACC+AGG 0.612700 2:-62283847 MsG0280009981.01.T01:CDS
GTGGCAGTGATTCCCGCATG+TGG 0.613531 2:-62284054 MsG0280009981.01.T01:CDS
GTAGCGACTAGGCTGAAGGT+AGG 0.624575 2:+62284109 None:intergenic
CGTCCCCGACGTCATCTCGA+CGG 0.625187 2:+62287224 None:intergenic
TACTGCTGCCCACCCCACCC+AGG 0.630033 2:+62284232 None:intergenic
ATTAGTAGCGACTAGGCTGA+AGG 0.637373 2:+62284105 None:intergenic
ACTTGGCGACCAGGGCTAGG+AGG 0.641842 2:+62284187 None:intergenic
TGTGGACCCCTGGACAAAGT+GGG 0.642302 2:-62284036 MsG0280009981.01.T01:CDS
CTGACATGGTAAGATGAACA+CGG 0.642363 2:+62284523 None:intergenic
CCCCAGCTATATATTCACAC+TGG 0.648796 2:-62284346 MsG0280009981.01.T01:CDS
ATGTTGACCGGAAAACTCGT+CGG 0.650604 2:+62287490 None:intergenic
TTTCAAGGGATGCAAGCCTG+CGG 0.653639 2:-62284584 MsG0280009981.01.T01:intron
GCAGTTGGAGAGCTAAGTGG+AGG 0.657333 2:+62284301 None:intergenic
TTTACAGCATGGGATGAGCG+CGG 0.658189 2:+62284451 None:intergenic
AGGAAGCACAGGGACTGACA+TGG 0.663416 2:+62284509 None:intergenic
CGGGGACGAGGCAACCAACG+TGG 0.666818 2:-62287209 MsG0280009981.01.T01:CDS
TCTGTCTACACTGATACACT+CGG 0.669063 2:+62286560 None:intergenic
CTTGGGTTGTAGGAAGCACA+GGG 0.669094 2:+62284499 None:intergenic
CCAGAGGAAAGCTGACTGGG+AGG 0.670133 2:-62284269 MsG0280009981.01.T01:CDS
ACATGTCCCACTTTGTCCAG+GGG 0.671696 2:+62284030 None:intergenic
TGACATGGTAAGATGAACAC+GGG 0.677171 2:+62284524 None:intergenic
TGATTGGATCTAAGAACGTG+AGG 0.680052 2:+62287436 None:intergenic
TTGGATCTAAGAACGTGAGG+TGG 0.690870 2:+62287439 None:intergenic
CCAGTGTGAATATATAGCTG+GGG 0.692170 2:+62284346 None:intergenic
CTGATGATGATCCAGATGAG+AGG 0.693997 2:+62284386 None:intergenic
GAACGCATGGATGTGATAGG+TGG 0.705174 2:-62284562 MsG0280009981.01.T01:CDS
GGGATCAGGATGCCCCACAG+CGG 0.711509 2:-62284142 MsG0280009981.01.T01:CDS
CAACTGCTCGATCACCCCAG+AGG 0.741309 2:-62284285 MsG0280009981.01.T01:CDS
TTTCCGTCGAGATGACGTCG+GGG 0.771606 2:-62287227 MsG0280009981.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTAATTTTAGTATTAATT+TGG - Chr2:62284433-62284452 MsG0280009981.01.T01:CDS 10.0%
!! AATGAAAATGTTTATTTCAA+GGG - Chr2:62286768-62286787 MsG0280009981.01.T01:intron 15.0%
!! CATAATAATTTCAACAAAAA+TGG + Chr2:62284766-62284785 None:intergenic 15.0%
!! TAAAAAAAGAAGAAATATCA+CGG + Chr2:62285320-62285339 None:intergenic 15.0%
!! TAATGAAAATGTTTATTTCA+AGG - Chr2:62286767-62286786 MsG0280009981.01.T01:intron 15.0%
!!! TGTCAATATTTTTTTTTTGA+AGG + Chr2:62285800-62285819 None:intergenic 15.0%
!! AAAAAAAATTGTTATGCATG+TGG - Chr2:62284535-62284554 MsG0280009981.01.T01:CDS 20.0%
!! AAAAAAAGAAGAAATATCAC+GGG + Chr2:62285319-62285338 None:intergenic 20.0%
!! AAAAAAATTGTTATGCATGT+GGG - Chr2:62284536-62284555 MsG0280009981.01.T01:CDS 20.0%
!! AAAAGATGAATAGAAAAATG+TGG - Chr2:62285569-62285588 MsG0280009981.01.T01:intron 20.0%
!! AATAAATGCAAAAACGAAAA+TGG + Chr2:62285540-62285559 None:intergenic 20.0%
!! AATATACTAAAAGCTATCAA+TGG - Chr2:62286260-62286279 MsG0280009981.01.T01:intron 20.0%
!! AGATTTAATTCCTTTATAAG+CGG + Chr2:62286487-62286506 None:intergenic 20.0%
!! GTAATATGATTACAAGAATT+AGG - Chr2:62284891-62284910 MsG0280009981.01.T01:intron 20.0%
!! TGAAATTATTATGTGTATCT+AGG - Chr2:62284773-62284792 MsG0280009981.01.T01:intron 20.0%
!! TGAACAAAAATTAACCAAAA+TGG - Chr2:62285662-62285681 MsG0280009981.01.T01:intron 20.0%
!!! AAAATTGGTATTTTGAGATT+TGG - Chr2:62285108-62285127 MsG0280009981.01.T01:intron 20.0%
!!! ATATGATATGTCAATTTTGT+AGG + Chr2:62285777-62285796 None:intergenic 20.0%
!!! ATATTAGATGCTTTATTGAA+GGG - Chr2:62286629-62286648 MsG0280009981.01.T01:intron 20.0%
!!! ATATTTCTTCTTTTTTTAGG+AGG - Chr2:62285322-62285341 MsG0280009981.01.T01:intron 20.0%
!!! GTGATATTTCTTCTTTTTTT+AGG - Chr2:62285319-62285338 MsG0280009981.01.T01:intron 20.0%
!!! GTTAGATTCTTTCTTTATTT+AGG - Chr2:62284913-62284932 MsG0280009981.01.T01:intron 20.0%
!!! GTTTTTGCATTTATTGTTTT+TGG - Chr2:62285545-62285564 MsG0280009981.01.T01:intron 20.0%
!!! GTTTTTGTTTTTTTCTTTAC+CGG - Chr2:62284104-62284123 MsG0280009981.01.T01:CDS 20.0%
!!! TATATCATTTTAGCAACTAA+TGG + Chr2:62286686-62286705 None:intergenic 20.0%
!!! TGTGATTTTGTTGTTATTTT+TGG - Chr2:62284862-62284881 MsG0280009981.01.T01:intron 20.0%
!!! TTGTTGTTATTTTTGGTTTA+TGG - Chr2:62284869-62284888 MsG0280009981.01.T01:intron 20.0%
! AAAAAATTGTTATGCATGTG+GGG - Chr2:62284537-62284556 MsG0280009981.01.T01:CDS 25.0%
! AAACTACCCTTAAATTCAAA+AGG + Chr2:62285175-62285194 None:intergenic 25.0%
! AACATTGAAGAGTTCTATTT+GGG + Chr2:62285874-62285893 None:intergenic 25.0%
! AATTTGGAAGAAATTGAGAA+CGG + Chr2:62283969-62283988 None:intergenic 25.0%
! ACAGTATATAAAACATCAAC+TGG + Chr2:62285738-62285757 None:intergenic 25.0%
! ACGAAAATGGAAAAAGTAAA+AGG + Chr2:62285527-62285546 None:intergenic 25.0%
! AGAATTATTTAACAGAACGT+AGG + Chr2:62286223-62286242 None:intergenic 25.0%
! CTATCAATGGTAGAATTTAA+GGG - Chr2:62286273-62286292 MsG0280009981.01.T01:intron 25.0%
! GAAAAAAGAGATGAATAGTT+TGG + Chr2:62286365-62286384 None:intergenic 25.0%
! GAAAAAGAACTTCCTATTAT+TGG + Chr2:62286572-62286591 None:intergenic 25.0%
! GATTTAATTCCTTTATAAGC+GGG + Chr2:62286486-62286505 None:intergenic 25.0%
! TAGATCGTCATCAATAATAA+AGG + Chr2:62285413-62285432 None:intergenic 25.0%
! TTACTAGTGTTCTTCAATAA+TGG - Chr2:62285904-62285923 MsG0280009981.01.T01:intron 25.0%
!! AAAATATAACTTGCATGCAA+TGG + Chr2:62286603-62286622 None:intergenic 25.0%
!! AACATGACCTTTTGAATTTA+AGG - Chr2:62285165-62285184 MsG0280009981.01.T01:intron 25.0%
!! ACATGACCTTTTGAATTTAA+GGG - Chr2:62285166-62285185 MsG0280009981.01.T01:intron 25.0%
!! CATATTAGATGCTTTATTGA+AGG - Chr2:62286628-62286647 MsG0280009981.01.T01:intron 25.0%
!! CTGATAATTTTTCTGTTCAT+CGG - Chr2:62284072-62284091 MsG0280009981.01.T01:CDS 25.0%
!! TCTATTTGGGATATTTAATC+TGG + Chr2:62285861-62285880 None:intergenic 25.0%
!! TTTGAATTTAAGGGTAGTTT+TGG - Chr2:62285175-62285194 MsG0280009981.01.T01:intron 25.0%
!!! AATCAAAATCATTTTTGCAG+TGG + Chr2:62286313-62286332 None:intergenic 25.0%
AAAATCAATACATGCAGAGA+AGG + Chr2:62286145-62286164 None:intergenic 30.0%
AATTGAATTCACTGTTAACC+TGG - Chr2:62286430-62286449 MsG0280009981.01.T01:intron 30.0%
ACAGAACGTAGGTAAATAAT+AGG + Chr2:62286212-62286231 None:intergenic 30.0%
ACTCTTCAATGTTCAACTAT+AGG - Chr2:62285881-62285900 MsG0280009981.01.T01:intron 30.0%
ATTATGTGTATCTAGGTGTT+TGG - Chr2:62284780-62284799 MsG0280009981.01.T01:intron 30.0%
ATTTCAGATGAATTTGCCTT+TGG - Chr2:62287416-62287435 MsG0280009981.01.T01:five_prime_UTR 30.0%
ATTTGGAAGAAATTGAGAAC+GGG + Chr2:62283968-62283987 None:intergenic 30.0%
CAATGATTCTCCAAATCAAA+AGG - Chr2:62284622-62284641 MsG0280009981.01.T01:intron 30.0%
GAACATTGAAGAGTTCTATT+TGG + Chr2:62285875-62285894 None:intergenic 30.0%
GAATTCAATTCAGTGCTTTA+AGG + Chr2:62286420-62286439 None:intergenic 30.0%
GCTATCAATGGTAGAATTTA+AGG - Chr2:62286272-62286291 MsG0280009981.01.T01:intron 30.0%
TACTCCAAGCAAAACTTATT+AGG - Chr2:62285712-62285731 MsG0280009981.01.T01:intron 30.0%
TTGCTACAATGTCCAATAAT+AGG - Chr2:62286557-62286576 MsG0280009981.01.T01:CDS 30.0%
! AGCACTTTGAAGATTTGAAT+CGG + Chr2:62284039-62284058 None:intergenic 30.0%
! AGTGTTCTTCAATAATGGAA+TGG - Chr2:62285909-62285928 MsG0280009981.01.T01:intron 30.0%
! GCATGCAAGTTATATTTTGT+TGG - Chr2:62286605-62286624 MsG0280009981.01.T01:intron 30.0%
!! ATCCGTGAGAAATATTTTGA+GGG - Chr2:62285060-62285079 MsG0280009981.01.T01:intron 30.0%
!! ATTGATGACGATCTATAAAC+TGG - Chr2:62285418-62285437 MsG0280009981.01.T01:intron 30.0%
!! GTTTCTAGTAACTGATTCAA+TGG - Chr2:62286082-62286101 MsG0280009981.01.T01:intron 30.0%
!! TTTGAGATTTGGACTTTTGA+GGG - Chr2:62285119-62285138 MsG0280009981.01.T01:intron 30.0%
!!! AACTGTATTGATTGCCATTT+TGG + Chr2:62285679-62285698 None:intergenic 30.0%
!!! TTTGTTTTTTTCTTTACCGG+CGG - Chr2:62284107-62284126 MsG0280009981.01.T01:CDS 30.0%
!!! TTTTGAGATTTGGACTTTTG+AGG - Chr2:62285118-62285137 MsG0280009981.01.T01:intron 30.0%
AAAGCTCTTTGTAATGAAGC+TGG - Chr2:62284306-62284325 MsG0280009981.01.T01:CDS 35.0%
AAGAAATATCACGGGAAGTA+AGG + Chr2:62285311-62285330 None:intergenic 35.0%
ACCATTAGGATTTACAGCAT+GGG + Chr2:62286928-62286947 None:intergenic 35.0%
AGCACTAAAGATTCTCTCTA+TGG - Chr2:62285006-62285025 MsG0280009981.01.T01:intron 35.0%
AGTTAACAGTGAATGTTGAC+CGG + Chr2:62283891-62283910 None:intergenic 35.0%
CACCAAAGACAAAAAGATGT+TGG - Chr2:62286170-62286189 MsG0280009981.01.T01:intron 35.0%
CATTCACTGTTAACTAACTC+CGG - Chr2:62283896-62283915 MsG0280009981.01.T01:CDS 35.0%
CGAGGGTGAAGAAAAAAAAT+TGG - Chr2:62285093-62285112 MsG0280009981.01.T01:intron 35.0%
CTATTGAGGACAAACAAAAC+TGG + Chr2:62285480-62285499 None:intergenic 35.0%
GACTGTATATACTGATCTAC+AGG - Chr2:62286527-62286546 MsG0280009981.01.T01:intron 35.0%
GATCTATAAACTGGAAAGAG+TGG - Chr2:62285427-62285446 MsG0280009981.01.T01:intron 35.0%
GATTCTCCAAATCAAAAGGA+CGG - Chr2:62284626-62284645 MsG0280009981.01.T01:intron 35.0%
GTTGAGTACGTGTGTTTAAA+GGG - Chr2:62285591-62285610 MsG0280009981.01.T01:intron 35.0%
TCATTGTTGTCGCAATGTTT+CGG + Chr2:62284279-62284298 None:intergenic 35.0%
TTGAGTACGTGTGTTTAAAG+GGG - Chr2:62285592-62285611 MsG0280009981.01.T01:intron 35.0%
! ACAATTTCGATCAGAAGTGT+AGG + Chr2:62284677-62284696 None:intergenic 35.0%
! GACCAACATCTTTTTGTCTT+TGG + Chr2:62286175-62286194 None:intergenic 35.0%
! GATCCGTGAGAAATATTTTG+AGG - Chr2:62285059-62285078 MsG0280009981.01.T01:intron 35.0%
! GGAGTATTAGTACAGTTTGA+GGG - Chr2:62286053-62286072 MsG0280009981.01.T01:intron 35.0%
! TACTAATCCATTTGGCTTCA+GGG - Chr2:62287277-62287296 MsG0280009981.01.T01:five_prime_UTR 35.0%
! TAGATTTTTGCATCATAGCC+AGG + Chr2:62286451-62286470 None:intergenic 35.0%
! TCTGAAATAGCTTCAGACAT+TGG + Chr2:62287404-62287423 None:intergenic 35.0%
! TTAGCAACTAATGGATCGAT+AGG + Chr2:62286677-62286696 None:intergenic 35.0%
! TTTCTTTATTTAGGACTCGC+CGG - Chr2:62284922-62284941 MsG0280009981.01.T01:intron 35.0%
!! AGGAGTATTAGTACAGTTTG+AGG - Chr2:62286052-62286071 MsG0280009981.01.T01:intron 35.0%
!! CTCTGTGAATTAAAAGTGTC+AGG - Chr2:62285628-62285647 MsG0280009981.01.T01:intron 35.0%
!! CTTTTTCCGTCCTTTTGATT+TGG + Chr2:62284635-62284654 None:intergenic 35.0%
!! GATGAATAGTTTGGAGCTTT+TGG + Chr2:62286356-62286375 None:intergenic 35.0%
!! TCCGTGAGAAATATTTTGAG+GGG - Chr2:62285061-62285080 MsG0280009981.01.T01:intron 35.0%
!!! AAGGGTAGTTTTGGTAGTTT+AGG - Chr2:62285184-62285203 MsG0280009981.01.T01:intron 35.0%
!!! CAGTTTTGTTTGTCCTCAAT+AGG - Chr2:62285478-62285497 MsG0280009981.01.T01:intron 35.0%
!!! CTTCTTTTTTTAGGAGGTTG+CGG - Chr2:62285328-62285347 MsG0280009981.01.T01:intron 35.0%
!!! GCTGCGTTTAATGTTACTTT+TGG - Chr2:62284837-62284856 MsG0280009981.01.T01:intron 35.0%
AAAGGAAAGAAACCCAACCA+AGG + Chr2:62285509-62285528 None:intergenic 40.0%
AACCAAGGAAAGTCCTATTG+AGG + Chr2:62285494-62285513 None:intergenic 40.0%
AATATATAGCTGGGGAAGCT+TGG + Chr2:62287015-62287034 None:intergenic 40.0%
ACATTCTTGCCCGCTTATAA+AGG - Chr2:62286474-62286493 MsG0280009981.01.T01:intron 40.0%
ACTCCTACAAATGTCAGAGT+GGG + Chr2:62286024-62286043 None:intergenic 40.0%
ACTCTGACATTTGTAGGAGT+AGG - Chr2:62286024-62286043 MsG0280009981.01.T01:intron 40.0%
AGAATAACAAGAGGAGAGAG+AGG - Chr2:62284190-62284209 MsG0280009981.01.T01:CDS 40.0%
AGCCAGTGTGAATATATAGC+TGG + Chr2:62287025-62287044 None:intergenic 40.0%
AGGAGAGAGAGAATAACAAG+AGG - Chr2:62284181-62284200 MsG0280009981.01.T01:CDS 40.0%
AGGGAATTTCCATCACCATT+AGG + Chr2:62286942-62286961 None:intergenic 40.0%
AGTGTCATGTGCTATATTGC+TGG + Chr2:62284581-62284600 None:intergenic 40.0%
ATGGAAATTCCCTCATTCCA+TGG - Chr2:62286949-62286968 MsG0280009981.01.T01:intron 40.0%
ATTTGTAGGAGTAGGACTGT+AGG - Chr2:62286032-62286051 MsG0280009981.01.T01:intron 40.0%
CAATAGGACTTTCCTTGGTT+GGG - Chr2:62285494-62285513 MsG0280009981.01.T01:intron 40.0%
CAATGGTAGAATTTAAGGGC+TGG - Chr2:62286277-62286296 MsG0280009981.01.T01:intron 40.0%
CACCATTAGGATTTACAGCA+TGG + Chr2:62286929-62286948 None:intergenic 40.0%
CATCTGATCCAGAATCTTCA+TGG + Chr2:62287487-62287506 None:intergenic 40.0%
CATTGCATGGTACTCTGATT+TGG - Chr2:62285271-62285290 MsG0280009981.01.T01:intron 40.0%
CCAGTGTGAATATATAGCTG+GGG + Chr2:62287023-62287042 None:intergenic 40.0%
CTAGTCGCTACTAATCCATT+TGG - Chr2:62287269-62287288 MsG0280009981.01.T01:five_prime_UTR 40.0%
CTCTTTGTAATGAAGCTGGT+TGG - Chr2:62284310-62284329 MsG0280009981.01.T01:CDS 40.0%
CTGACATGGTAAGATGAACA+CGG + Chr2:62286846-62286865 None:intergenic 40.0%
GCCAGTGTGAATATATAGCT+GGG + Chr2:62287024-62287043 None:intergenic 40.0%
GCCCCTCAAAATATTTCTCA+CGG + Chr2:62285065-62285084 None:intergenic 40.0%
GCGTTTGAAGGAGTTGAATT+TGG + Chr2:62283985-62284004 None:intergenic 40.0%
GCTGTAAATCCTAATGGTGA+TGG - Chr2:62286930-62286949 MsG0280009981.01.T01:intron 40.0%
GGTAGTTTAGGTGTGTGATT+TGG - Chr2:62285196-62285215 MsG0280009981.01.T01:intron 40.0%
GGTTGAGTACGTGTGTTTAA+AGG - Chr2:62285590-62285609 MsG0280009981.01.T01:intron 40.0%
GTTCCCATACATTCTCAAAC+CGG + Chr2:62284247-62284266 None:intergenic 40.0%
TACAAAACGACTGCGTTTGA+AGG + Chr2:62283997-62284016 None:intergenic 40.0%
TACTCCTACAAATGTCAGAG+TGG + Chr2:62286025-62286044 None:intergenic 40.0%
TCAATAGGACTTTCCTTGGT+TGG - Chr2:62285493-62285512 MsG0280009981.01.T01:intron 40.0%
TCCCATGCTGTAAATCCTAA+TGG - Chr2:62286924-62286943 MsG0280009981.01.T01:intron 40.0%
TCTGTCTACACTGATACACT+CGG + Chr2:62284809-62284828 None:intergenic 40.0%
TGACATGGTAAGATGAACAC+GGG + Chr2:62286845-62286864 None:intergenic 40.0%
TGATGGTACAACGTATCGTA+AGG - Chr2:62284344-62284363 MsG0280009981.01.T01:CDS 40.0%
TGATTGGATCTAAGAACGTG+AGG + Chr2:62283933-62283952 None:intergenic 40.0%
TTACGATACGTTGTACCATC+AGG + Chr2:62284345-62284364 None:intergenic 40.0%
! AAGCTTTTGCAGACATTGCA+TGG - Chr2:62285258-62285277 MsG0280009981.01.T01:intron 40.0%
! CTACTAATCCATTTGGCTTC+AGG - Chr2:62287276-62287295 MsG0280009981.01.T01:five_prime_UTR 40.0%
! CTGGCCTAATAAGTTTTGCT+TGG + Chr2:62285719-62285738 None:intergenic 40.0%
! GATGATTTAGAGCTCACTCT+TGG - Chr2:62287503-62287522 MsG0280009981.01.T01:five_prime_UTR 40.0%
! TCTCCGGTTTGAGAATGTAT+GGG - Chr2:62284241-62284260 MsG0280009981.01.T01:CDS 40.0%
! TTCTCCGGTTTGAGAATGTA+TGG - Chr2:62284240-62284259 MsG0280009981.01.T01:CDS 40.0%
!! CAAATGGATTAGTAGCGACT+AGG + Chr2:62287271-62287290 None:intergenic 40.0%
!! CAGTGCTTTAAGGCTTGTTT+GGG + Chr2:62286410-62286429 None:intergenic 40.0%
!! CGGGAGAATTTTGATCTGAT+TGG + Chr2:62283949-62283968 None:intergenic 40.0%
!! GTTTTTGAGCCATGGAATGA+GGG + Chr2:62286961-62286980 None:intergenic 40.0%
!! TCAGTGCTTTAAGGCTTGTT+TGG + Chr2:62286411-62286430 None:intergenic 40.0%
!! TTGCTGAGCTTGTTGCTATT+TGG - Chr2:62285232-62285251 MsG0280009981.01.T01:intron 40.0%
AACATGTCCCACTTTGTCCA+GGG + Chr2:62287340-62287359 None:intergenic 45.0%
ACCAATCTGGGTCAAGAACT+TGG + Chr2:62287199-62287218 None:intergenic 45.0%
ACGGAAAAAAATCTCACCGC+CGG + Chr2:62284126-62284145 None:intergenic 45.0%
ATAGCAGCGAAGATCTTCTC+CGG - Chr2:62284225-62284244 MsG0280009981.01.T01:CDS 45.0%
ATGTTGACCGGAAAACTCGT+CGG + Chr2:62283879-62283898 None:intergenic 45.0%
ATTAGTAGCGACTAGGCTGA+AGG + Chr2:62287264-62287283 None:intergenic 45.0%
CCCCAGCTATATATTCACAC+TGG - Chr2:62287020-62287039 MsG0280009981.01.T01:intron 45.0%
CTCCTACAAATGTCAGAGTG+GGG + Chr2:62286023-62286042 None:intergenic 45.0%
GAGAGGATCCATGAAGATTC+TGG - Chr2:62287476-62287495 MsG0280009981.01.T01:five_prime_UTR 45.0%
GCTTCACGCTTAAAAGCGAA+AGG + Chr2:62284989-62285008 None:intergenic 45.0%
GTCCTCAATAGGACTTTCCT+TGG - Chr2:62285489-62285508 MsG0280009981.01.T01:intron 45.0%
TGATCCCAGCAAACCAATCT+GGG + Chr2:62287211-62287230 None:intergenic 45.0%
TGGCTCAAAAACCTCTCATC+TGG - Chr2:62286969-62286988 MsG0280009981.01.T01:intron 45.0%
TGTAGGTGCTAAAGAGCTCT+AGG + Chr2:62284660-62284679 None:intergenic 45.0%
TTCCCCACTCTGACATTTGT+AGG - Chr2:62286018-62286037 MsG0280009981.01.T01:intron 45.0%
TTGGATCTAAGAACGTGAGG+TGG + Chr2:62283930-62283949 None:intergenic 45.0%
! CAATTCTCCGACGAGTTTTC+CGG - Chr2:62283869-62283888 MsG0280009981.01.T01:CDS 45.0%
! CTGATGATGATCCAGATGAG+AGG + Chr2:62286983-62287002 None:intergenic 45.0%
! GTGATAGGTGGTTCTGCAAT+GGG - Chr2:62286816-62286835 MsG0280009981.01.T01:intron 45.0%
! TGTGATAGGTGGTTCTGCAA+TGG - Chr2:62286815-62286834 MsG0280009981.01.T01:intron 45.0%
! TTAAGGCTTGTTTGGGAGGA+CGG + Chr2:62286403-62286422 None:intergenic 45.0%
! TTCAGGGAAGAGGTTTTCTG+TGG - Chr2:62287293-62287312 MsG0280009981.01.T01:five_prime_UTR 45.0%
! TTTTTCCGTCGAGATGACGT+CGG - Chr2:62284137-62284156 MsG0280009981.01.T01:CDS 45.0%
!! AGTTGGTTTGGTGAAGCCTT+GGG - Chr2:62287448-62287467 MsG0280009981.01.T01:five_prime_UTR 45.0%
!! GATGAGAGGTTTTTGAGCCA+TGG + Chr2:62286969-62286988 None:intergenic 45.0%
!! GGTTTTTGAGCCATGGAATG+AGG + Chr2:62286962-62286981 None:intergenic 45.0%
!! TGCTTTAAGGCTTGTTTGGG+AGG + Chr2:62286407-62286426 None:intergenic 45.0%
!! TTGACCCAGATTGGTTTGCT+GGG - Chr2:62287204-62287223 MsG0280009981.01.T01:CDS 45.0%
AAGGAAGAAGAGCCAGGACT+TGG + Chr2:62286888-62286907 None:intergenic 50.0%
ACATGTCCCACTTTGTCCAG+GGG + Chr2:62287339-62287358 None:intergenic 50.0%
ACCAACTGCACTGCTTCCAA+AGG + Chr2:62287435-62287454 None:intergenic 50.0%
ACCTCTTCCCTGAAGCCAAA+TGG + Chr2:62287287-62287306 None:intergenic 50.0%
AGGAAGAAGAGCCAGGACTT+GGG + Chr2:62286887-62286906 None:intergenic 50.0%
AGGATCAGTCTACTCGTCCT+GGG - Chr2:62287117-62287136 MsG0280009981.01.T01:CDS 50.0%
CGACCAGATCTAACGTACAC+CGG + Chr2:62284944-62284963 None:intergenic 50.0%
CGGTGTACGTTAGATCTGGT+CGG - Chr2:62284942-62284961 MsG0280009981.01.T01:intron 50.0%
CTCTTGGTACCTCAAAGACC+AGG - Chr2:62287519-62287538 MsG0280009981.01.T01:five_prime_UTR 50.0%
CTGATCCCAGCAAACCAATC+TGG + Chr2:62287212-62287231 None:intergenic 50.0%
GAACATGTCCCACTTTGTCC+AGG + Chr2:62287341-62287360 None:intergenic 50.0%
GAACGCATGGATGTGATAGG+TGG - Chr2:62286804-62286823 MsG0280009981.01.T01:intron 50.0%
GCCAAGTTCTTGACCCAGAT+TGG - Chr2:62287195-62287214 MsG0280009981.01.T01:CDS 50.0%
GGTGTACGTTAGATCTGGTC+GGG - Chr2:62284943-62284962 MsG0280009981.01.T01:intron 50.0%
GTGTACGTTAGATCTGGTCG+GGG - Chr2:62284944-62284963 MsG0280009981.01.T01:intron 50.0%
TGGAAGCAGTGCAGTTGGTT+TGG - Chr2:62287436-62287455 MsG0280009981.01.T01:five_prime_UTR 50.0%
TTCTCTCTCTCCTTCCACGT+TGG + Chr2:62284174-62284193 None:intergenic 50.0%
TTTACAGCATGGGATGAGCG+CGG + Chr2:62286918-62286937 None:intergenic 50.0%
TTTCAAGGGATGCAAGCCTG+CGG - Chr2:62286782-62286801 MsG0280009981.01.T01:intron 50.0%
! ACTTGGGTTGTAGGAAGCAC+AGG + Chr2:62286871-62286890 None:intergenic 50.0%
! CTTGGGTTGTAGGAAGCACA+GGG + Chr2:62286870-62286889 None:intergenic 50.0%
! CTTGTTTGGGAGGACGGTTT+TGG + Chr2:62286397-62286416 None:intergenic 50.0%
! TCCATTTGGCTTCAGGGAAG+AGG - Chr2:62287283-62287302 MsG0280009981.01.T01:five_prime_UTR 50.0%
! TGTTCTCCAGCTTTAGCTGC+AGG - Chr2:62287356-62287375 MsG0280009981.01.T01:five_prime_UTR 50.0%
! TTGAGGGGCATAGATCTCGA+GGG - Chr2:62285076-62285095 MsG0280009981.01.T01:intron 50.0%
! TTTGAGGGGCATAGATCTCG+AGG - Chr2:62285075-62285094 MsG0280009981.01.T01:intron 50.0%
! TTTTCCGTCGAGATGACGTC+GGG - Chr2:62284138-62284157 MsG0280009981.01.T01:CDS 50.0%
!! CAGATTGGTTTGCTGGGATC+AGG - Chr2:62287210-62287229 MsG0280009981.01.T01:CDS 50.0%
!! CAGTTGGTTTGGTGAAGCCT+TGG - Chr2:62287447-62287466 MsG0280009981.01.T01:five_prime_UTR 50.0%
!! CTTGACCCAGATTGGTTTGC+TGG - Chr2:62287203-62287222 MsG0280009981.01.T01:CDS 50.0%
ACCCCAGAGGAAAGCTGACT+GGG - Chr2:62287094-62287113 MsG0280009981.01.T01:CDS 55.0%
ACGTGAGGTGGTTACTTCGC+CGG + Chr2:62283918-62283937 None:intergenic 55.0%
AGGAGAAGTTTGCCCGCTGT+GGG + Chr2:62287240-62287259 None:intergenic 55.0%
ATCACATCCATGCGTTCCGC+AGG + Chr2:62286801-62286820 None:intergenic 55.0%
ATCAGTCTACTCGTCCTGGG+TGG - Chr2:62287120-62287139 MsG0280009981.01.T01:CDS 55.0%
ATGTGGACCCCTGGACAAAG+TGG - Chr2:62287329-62287348 MsG0280009981.01.T01:five_prime_UTR 55.0%
CGAGCAGTTGGAGAGCTAAG+TGG + Chr2:62287071-62287090 None:intergenic 55.0%
CTAGGGAAGGAAGAAGAGCC+AGG + Chr2:62286894-62286913 None:intergenic 55.0%
CTCCCAGTCAGCTTTCCTCT+GGG + Chr2:62287099-62287118 None:intergenic 55.0%
GAGCTAAGTGGAGGAGTGAC+AGG + Chr2:62287059-62287078 None:intergenic 55.0%
GAGGATCAGTCTACTCGTCC+TGG - Chr2:62287116-62287135 MsG0280009981.01.T01:CDS 55.0%
GCAGTTGGAGAGCTAAGTGG+AGG + Chr2:62287068-62287087 None:intergenic 55.0%
GCGGAACGCATGGATGTGAT+AGG - Chr2:62286801-62286820 MsG0280009981.01.T01:intron 55.0%
GCTTCCTACAACCCAAGTCC+TGG - Chr2:62286873-62286892 MsG0280009981.01.T01:intron 55.0%
GGTCAAGAACTTGGCGACCA+GGG + Chr2:62287190-62287209 None:intergenic 55.0%
GGTTGGATCGTTGAGCCTGA+TGG - Chr2:62284327-62284346 MsG0280009981.01.T01:CDS 55.0%
GTAGCGACTAGGCTGAAGGT+AGG + Chr2:62287260-62287279 None:intergenic 55.0%
TAGCTGGGGAAGCTTGGAAG+AGG + Chr2:62287009-62287028 None:intergenic 55.0%
TAGGAGAAGTTTGCCCGCTG+TGG + Chr2:62287241-62287260 None:intergenic 55.0%
TCAGAGCCTGCAGCTAAAGC+TGG + Chr2:62287365-62287384 None:intergenic 55.0%
TCAGTCTACTCGTCCTGGGT+GGG - Chr2:62287121-62287140 MsG0280009981.01.T01:CDS 55.0%
TCCCAGTCAGCTTTCCTCTG+GGG + Chr2:62287098-62287117 None:intergenic 55.0%
TCGCCGGTGTACGTTAGATC+TGG - Chr2:62284938-62284957 MsG0280009981.01.T01:intron 55.0%
TGAAGCCTTGGGAAGGAGAG+AGG - Chr2:62287459-62287478 MsG0280009981.01.T01:five_prime_UTR 55.0%
TGGATCCTCTCTCCTTCCCA+AGG + Chr2:62287467-62287486 None:intergenic 55.0%
TGTGGACCCCTGGACAAAGT+GGG - Chr2:62287330-62287349 MsG0280009981.01.T01:five_prime_UTR 55.0%
TTACAGCATGGGATGAGCGC+GGG + Chr2:62286917-62286936 None:intergenic 55.0%
TTTCCGTCGAGATGACGTCG+GGG - Chr2:62284139-62284158 MsG0280009981.01.T01:CDS 55.0%
TTTGTCCAGGGGTCCACATG+CGG + Chr2:62287328-62287347 None:intergenic 55.0%
! AGAGCCAGGACTTGGGTTGT+AGG + Chr2:62286880-62286899 None:intergenic 55.0%
! AGGAAGCACAGGGACTGACA+TGG + Chr2:62286860-62286879 None:intergenic 55.0%
! GCCTTTGGAAGCAGTGCAGT+TGG - Chr2:62287431-62287450 MsG0280009981.01.T01:five_prime_UTR 55.0%
!! AGGAGTGACAGGAGCACTGA+TGG + Chr2:62287048-62287067 None:intergenic 55.0%
!! GGTTTGGTGAAGCCTTGGGA+AGG - Chr2:62287452-62287471 MsG0280009981.01.T01:five_prime_UTR 55.0%
AGAACTTGGCGACCAGGGCT+AGG + Chr2:62287185-62287204 None:intergenic 60.0%
ATGCAAGCCTGCGGAACGCA+TGG - Chr2:62286791-62286810 MsG0280009981.01.T01:intron 60.0%
CAACTGCTCGATCACCCCAG+AGG - Chr2:62287081-62287100 MsG0280009981.01.T01:CDS 60.0%
CACCCCAGAGGAAAGCTGAC+TGG - Chr2:62287093-62287112 MsG0280009981.01.T01:CDS 60.0%
CAGTCTACTCGTCCTGGGTG+GGG - Chr2:62287122-62287141 MsG0280009981.01.T01:CDS 60.0%
CCAGAGGAAAGCTGACTGGG+AGG - Chr2:62287097-62287116 MsG0280009981.01.T01:CDS 60.0%
CCTCCCAGTCAGCTTTCCTC+TGG + Chr2:62287100-62287119 None:intergenic 60.0%
GACGAGGCAACCAACGTGGA+AGG - Chr2:62284161-62284180 MsG0280009981.01.T01:CDS 60.0%
GGAGAAGTTTGCCCGCTGTG+GGG + Chr2:62287239-62287258 None:intergenic 60.0%
GGGTCAAGAACTTGGCGACC+AGG + Chr2:62287191-62287210 None:intergenic 60.0%
GTGGCAGTGATTCCCGCATG+TGG - Chr2:62287312-62287331 MsG0280009981.01.T01:five_prime_UTR 60.0%
GTTAGATCTGGTCGGGGCAG+TGG - Chr2:62284950-62284969 MsG0280009981.01.T01:intron 60.0%
TAGGAGGAGTGGAGGAAGGC+TGG + Chr2:62287166-62287185 None:intergenic 60.0%
TTGTCCAGGGGTCCACATGC+GGG + Chr2:62287327-62287346 None:intergenic 60.0%
!! CTCTGGGGTGATCGAGCAGT+TGG + Chr2:62287083-62287102 None:intergenic 60.0%
ACCAGGGCTAGGAGGAGTGG+AGG + Chr2:62287174-62287193 None:intergenic 65.0%
ACTTGGCGACCAGGGCTAGG+AGG + Chr2:62287182-62287201 None:intergenic 65.0%
CGTCCCCGACGTCATCTCGA+CGG + Chr2:62284145-62284164 None:intergenic 65.0%
CTACTCGTCCTGGGTGGGGT+GGG - Chr2:62287126-62287145 MsG0280009981.01.T01:CDS 65.0%
GATTCCCGCATGTGGACCCC+TGG - Chr2:62287320-62287339 MsG0280009981.01.T01:five_prime_UTR 65.0%
GGATCAGGATGCCCCACAGC+GGG - Chr2:62287225-62287244 MsG0280009981.01.T01:exon 65.0%
GGGATCAGGATGCCCCACAG+CGG - Chr2:62287224-62287243 MsG0280009981.01.T01:exon 65.0%
GGGCTAGGAGGAGTGGAGGA+AGG + Chr2:62287170-62287189 None:intergenic 65.0%
TCCTCCACTCCTCCTAGCCC+TGG - Chr2:62287170-62287189 MsG0280009981.01.T01:CDS 65.0%
TCGAGATGACGTCGGGGACG+AGG - Chr2:62284145-62284164 MsG0280009981.01.T01:CDS 65.0%
TCTACTCGTCCTGGGTGGGG+TGG - Chr2:62287125-62287144 MsG0280009981.01.T01:CDS 65.0%
! CATGGGATGAGCGCGGGCTA+GGG + Chr2:62286911-62286930 None:intergenic 65.0%
CGGGGACGAGGCAACCAACG+TGG - Chr2:62284157-62284176 MsG0280009981.01.T01:CDS 70.0%
GCATGGGATGAGCGCGGGCT+AGG + Chr2:62286912-62286931 None:intergenic 70.0%
GCGACCAGGGCTAGGAGGAG+TGG + Chr2:62287177-62287196 None:intergenic 70.0%
TACTGCTGCCCACCCCACCC+AGG + Chr2:62287137-62287156 None:intergenic 70.0%
TCTGGTCGGGGCAGTGGCTG+AGG - Chr2:62284956-62284975 MsG0280009981.01.T01:intron 70.0%
!! GGATGAGCGCGGGCTAGGGA+AGG + Chr2:62286907-62286926 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 62283844 62287544 62283844 ID=MsG0280009981.01;Name=MsG0280009981.01
Chr2 mRNA 62283844 62287544 62283844 ID=MsG0280009981.01.T01;Parent=MsG0280009981.01;Name=MsG0280009981.01.T01;_AED=0.48;_eAED=0.51;_QI=306|0|0.33|1|1|1|3|0|345
Chr2 exon 62283844 62284599 62283844 ID=MsG0280009981.01.T01:exon:34705;Parent=MsG0280009981.01.T01
Chr2 exon 62286528 62286593 62286528 ID=MsG0280009981.01.T01:exon:34704;Parent=MsG0280009981.01.T01
Chr2 exon 62287023 62287544 62287023 ID=MsG0280009981.01.T01:exon:34703;Parent=MsG0280009981.01.T01
Chr2 five_prime_UTR 62287239 62287544 62287239 ID=MsG0280009981.01.T01:five_prime_utr;Parent=MsG0280009981.01.T01
Chr2 CDS 62287023 62287238 62287023 ID=MsG0280009981.01.T01:cds;Parent=MsG0280009981.01.T01
Chr2 CDS 62286528 62286593 62286528 ID=MsG0280009981.01.T01:cds;Parent=MsG0280009981.01.T01
Chr2 CDS 62283844 62284599 62283844 ID=MsG0280009981.01.T01:cds;Parent=MsG0280009981.01.T01
Gene Sequence

>MsG0280009981.01.T01

ATGACGTCGGGGACGAGGCAACCAACGTGGAAGGAGAGAGAGAATAACAAGAGGAGAGAGAGGAGAAGAAGAGCGATAGCAGCGAAGATCTTCTCCGGTTTGAGAATGTATGGGAACTATAAGCTTCCGAAACATTGCGACAACAATGAAGTTCTCAAAGCTCTTTGTAATGAAGCTGGTTGGATCGTTGAGCCTGATGGTACAACGTATCGTAAGGTGTTTGGTGTCCGAGTGTATCAGTGTAGACAGATAGATAGTGCTGCGTTTAATGTTACTTTTGGTGGATGCAAGCCTGCGGAACGCATGGATGTGATAGGTGGTTCTGCAATGGGAAGCCCGTGTTCATCTTACCATGTCAGTCCCTGTGCTTCCTACAACCCAAGTCCTGGCTCTTCTTCCTTCCCTAGCCCGCGCTCATCCCATGCTGTAAATCCTAATGGTGATGGAAATTCCCTCATTCCATGGCTCAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCTTCCCCAGCTATATATTCACACTGGCTCCATCAGTGCTCCTGTCACTCCTCCACTTAGCTCTCCAACTGCTCGATCACCCCAGAGGAAAGCTGACTGGGAGGATCAGTCTACTCGTCCTGGGTGGGGTGGGCAGCAGTACTCTTTCCAGCCTTCCTCCACTCCTCCTAGCCCTGGTCGCCAAGTTCTTGACCCAGATTGGTTTGCTGGGATCAGGATGCCCCACAGCGGGCAAACTTCTCCTACCTTCAGCCTAGTCGCTACTAATCCATTTGGCTTCAGGGAAGAGGTTTTCTGTGGCAGTGATTCCCGCATGTGGACCCCTGGACAAAGTGGGACATGTTCTCCAGCTTTAGCTGCAGGCTCTGATCATAATGCTGACATACCAATGTCTGAAGCTATTTCAGATGAATTTGCCTTTGGAAGCAGTGCAGTTGGTTTGGTGAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCAGATGATTTAGAGCTCACTCTTGGTACCTCAAAGACCAGGTAA
Protein sequence

>MsG0280009981.01.T01

MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKVFGVRVYQCRQIDSAAFNVTFGGCKPAERMDVIGGSAMGSPCSSYHVSPCASYNPSPGSSSFPSPRSSHAVNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIHTGSISAPVTPPLSSPTARSPQRKADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVLDPDWFAGIRMPHSGQTSPTFSLVATNPFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLVKPWEGERIHEDSGSDDLELTLGTSKTR*