Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045909.01.T01 | XP_013457448.1 | 96.1 | 359 | 10 | 1 | 1 | 355 | 1 | 359 | 0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045909.01.T01 | Q9FMH8 | 64.507 | 355 | 101 | 6 | 9 | 345 | 10 | 357 | 2.03E-163 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045909.01.T01 | A0A072UNT0 | 96.100 | 359 | 10 | 1 | 1 | 355 | 1 | 359 | 0.0 | 717 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048889.01 | MsG0880045909.01 | 0.817784 | 2.755914e-52 | 2.026174e-49 |
| MsG0080049008.01 | MsG0880045909.01 | 0.847556 | 1.073081e-59 | 1.914648e-56 |
| MsG0180000551.01 | MsG0880045909.01 | 0.821044 | 4.977898e-53 | 4.006075e-50 |
| MsG0880045909.01 | MsG0880046010.01 | -0.824153 | 9.419809e-54 | 8.276204e-51 |
| MsG0180003238.01 | MsG0880045909.01 | 0.800741 | 1.249840e-48 | 5.864548e-46 |
| MsG0780041403.01 | MsG0880045909.01 | 0.803917 | 2.772662e-49 | 1.410685e-46 |
| MsG0780041436.01 | MsG0880045909.01 | 0.802997 | 4.300666e-49 | 2.136793e-46 |
| MsG0780041591.01 | MsG0880045909.01 | 0.829005 | 6.555793e-55 | 6.624299e-52 |
| MsG0480023663.01 | MsG0880045909.01 | 0.803758 | 2.991797e-49 | 1.515900e-46 |
| MsG0580024804.01 | MsG0880045909.01 | -0.808740 | 2.669122e-50 | 1.538160e-47 |
| MsG0280007653.01 | MsG0880045909.01 | -0.825857 | 3.728423e-54 | 3.439542e-51 |
| MsG0780038305.01 | MsG0880045909.01 | 0.830943 | 2.209345e-55 | 2.362604e-52 |
| MsG0780038914.01 | MsG0880045909.01 | 0.801968 | 7.008996e-49 | 3.392343e-46 |
| MsG0780039234.01 | MsG0880045909.01 | 0.819153 | 1.348721e-52 | 1.029640e-49 |
| MsG0780039431.01 | MsG0880045909.01 | 0.806133 | 9.538363e-50 | 5.136989e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045909.01.T01 | MTR_4g094918 | 96.100 | 359 | 10 | 1 | 1 | 355 | 1 | 359 | 0.0 | 717 |
| MsG0880045909.01.T01 | MTR_1g018840 | 64.345 | 359 | 114 | 1 | 2 | 346 | 8 | 366 | 2.92e-176 | 497 |
| MsG0880045909.01.T01 | MTR_1g018840 | 64.345 | 359 | 114 | 1 | 2 | 346 | 8 | 366 | 9.36e-176 | 497 |
| MsG0880045909.01.T01 | MTR_3g102220 | 63.966 | 358 | 114 | 2 | 3 | 345 | 8 | 365 | 1.86e-171 | 486 |
| MsG0880045909.01.T01 | MTR_1g107550 | 66.964 | 336 | 107 | 3 | 12 | 346 | 28 | 360 | 4.72e-168 | 477 |
| MsG0880045909.01.T01 | MTR_3g075390 | 50.275 | 364 | 162 | 7 | 4 | 354 | 1 | 358 | 3.76e-124 | 362 |
| MsG0880045909.01.T01 | MTR_3g116080 | 49.128 | 344 | 164 | 4 | 4 | 342 | 11 | 348 | 3.83e-122 | 356 |
| MsG0880045909.01.T01 | MTR_4g079770 | 50.000 | 342 | 159 | 8 | 5 | 341 | 10 | 344 | 4.25e-118 | 345 |
| MsG0880045909.01.T01 | MTR_4g104370 | 49.284 | 349 | 162 | 7 | 4 | 342 | 1 | 344 | 4.42e-117 | 343 |
| MsG0880045909.01.T01 | MTR_4g079470 | 51.515 | 330 | 146 | 8 | 19 | 341 | 22 | 344 | 5.69e-117 | 343 |
| MsG0880045909.01.T01 | MTR_5g022560 | 48.824 | 340 | 164 | 6 | 6 | 341 | 10 | 343 | 1.67e-115 | 339 |
| MsG0880045909.01.T01 | MTR_2g090890 | 47.813 | 343 | 167 | 5 | 3 | 343 | 6 | 338 | 3.33e-115 | 338 |
| MsG0880045909.01.T01 | MTR_4g079800 | 52.733 | 311 | 136 | 7 | 35 | 341 | 41 | 344 | 4.44e-115 | 338 |
| MsG0880045909.01.T01 | MTR_4g047610 | 49.693 | 326 | 148 | 6 | 23 | 341 | 26 | 342 | 5.20e-114 | 335 |
| MsG0880045909.01.T01 | MTR_4g107930 | 48.094 | 341 | 167 | 6 | 5 | 341 | 10 | 344 | 1.50e-113 | 334 |
| MsG0880045909.01.T01 | MTR_3g112430 | 51.290 | 310 | 148 | 3 | 34 | 342 | 35 | 342 | 2.67e-112 | 334 |
| MsG0880045909.01.T01 | MTR_2g075830 | 49.263 | 339 | 161 | 6 | 6 | 341 | 10 | 340 | 1.86e-111 | 328 |
| MsG0880045909.01.T01 | MTR_4g080700 | 51.133 | 309 | 140 | 6 | 35 | 341 | 40 | 339 | 3.69e-111 | 328 |
| MsG0880045909.01.T01 | MTR_4g079440 | 47.025 | 353 | 166 | 7 | 1 | 341 | 1 | 344 | 7.35e-111 | 327 |
| MsG0880045909.01.T01 | MTR_4g080730 | 48.607 | 323 | 155 | 6 | 21 | 341 | 26 | 339 | 1.34e-109 | 323 |
| MsG0880045909.01.T01 | MTR_4g080360 | 46.866 | 335 | 171 | 6 | 10 | 341 | 11 | 341 | 3.94e-104 | 310 |
| MsG0880045909.01.T01 | MTR_2g083930 | 45.536 | 336 | 175 | 5 | 9 | 341 | 13 | 343 | 1.50e-103 | 308 |
| MsG0880045909.01.T01 | MTR_2g016180 | 44.957 | 347 | 171 | 9 | 8 | 342 | 18 | 356 | 9.88e-96 | 293 |
| MsG0880045909.01.T01 | MTR_2g016270 | 44.380 | 347 | 158 | 9 | 8 | 342 | 18 | 341 | 2.31e-93 | 287 |
| MsG0880045909.01.T01 | MTR_7g079230 | 40.936 | 342 | 183 | 8 | 5 | 340 | 6 | 334 | 1.21e-90 | 275 |
| MsG0880045909.01.T01 | MTR_7g078600 | 46.605 | 324 | 150 | 11 | 22 | 341 | 33 | 337 | 9.16e-90 | 273 |
| MsG0880045909.01.T01 | MTR_2g015850 | 46.102 | 295 | 150 | 8 | 49 | 341 | 76 | 363 | 4.50e-81 | 251 |
| MsG0880045909.01.T01 | MTR_4g065077 | 41.398 | 372 | 180 | 13 | 1 | 348 | 6 | 363 | 4.22e-78 | 244 |
| MsG0880045909.01.T01 | MTR_2g015920 | 39.450 | 327 | 181 | 10 | 25 | 343 | 43 | 360 | 1.20e-74 | 235 |
| MsG0880045909.01.T01 | MTR_4g125300 | 42.671 | 307 | 155 | 9 | 41 | 341 | 57 | 348 | 8.00e-73 | 230 |
| MsG0880045909.01.T01 | MTR_8g086470 | 38.587 | 368 | 180 | 12 | 1 | 348 | 22 | 363 | 1.46e-68 | 219 |
| MsG0880045909.01.T01 | MTR_2g067900 | 39.474 | 342 | 179 | 13 | 12 | 341 | 1 | 326 | 6.35e-67 | 214 |
| MsG0880045909.01.T01 | MTR_2g015930 | 34.688 | 369 | 203 | 11 | 3 | 343 | 2 | 360 | 3.12e-65 | 211 |
| MsG0880045909.01.T01 | MTR_1g023210 | 40.268 | 298 | 152 | 8 | 41 | 321 | 57 | 345 | 1.75e-63 | 206 |
| MsG0880045909.01.T01 | MTR_4g071060 | 38.701 | 354 | 161 | 13 | 7 | 321 | 5 | 341 | 1.08e-62 | 204 |
| MsG0880045909.01.T01 | MTR_2g067560 | 40.116 | 344 | 167 | 16 | 12 | 336 | 1 | 324 | 7.31e-60 | 207 |
| MsG0880045909.01.T01 | MTR_2g064475 | 37.398 | 369 | 164 | 17 | 23 | 343 | 4 | 353 | 5.74e-59 | 194 |
| MsG0880045909.01.T01 | MTR_1g094135 | 35.030 | 334 | 183 | 8 | 35 | 349 | 56 | 374 | 2.72e-57 | 191 |
| MsG0880045909.01.T01 | MTR_1g023810 | 42.105 | 228 | 120 | 6 | 117 | 339 | 41 | 261 | 1.95e-53 | 177 |
| MsG0880045909.01.T01 | MTR_2g066980 | 34.167 | 360 | 174 | 15 | 1 | 340 | 1 | 317 | 4.18e-52 | 176 |
| MsG0880045909.01.T01 | MTR_7g078630 | 39.781 | 274 | 119 | 8 | 35 | 296 | 706 | 945 | 2.19e-51 | 184 |
| MsG0880045909.01.T01 | MTR_4g072790 | 31.627 | 332 | 176 | 7 | 8 | 321 | 7 | 305 | 3.29e-46 | 160 |
| MsG0880045909.01.T01 | MTR_4g073660 | 31.250 | 336 | 176 | 7 | 8 | 321 | 6 | 308 | 1.12e-45 | 159 |
| MsG0880045909.01.T01 | MTR_4g072340 | 32.317 | 328 | 174 | 8 | 9 | 321 | 15 | 309 | 2.37e-45 | 158 |
| MsG0880045909.01.T01 | MTR_2g015840 | 29.598 | 348 | 148 | 14 | 9 | 340 | 4 | 270 | 2.51e-35 | 130 |
| MsG0880045909.01.T01 | MTR_1g025450 | 40.909 | 176 | 82 | 5 | 121 | 293 | 51 | 207 | 1.07e-34 | 134 |
| MsG0880045909.01.T01 | MTR_7g078580 | 47.706 | 109 | 54 | 3 | 243 | 350 | 4 | 110 | 3.70e-31 | 115 |
| MsG0880045909.01.T01 | MTR_2g016380 | 44.628 | 121 | 62 | 3 | 225 | 342 | 18 | 136 | 4.99e-28 | 110 |
| MsG0880045909.01.T01 | MTR_7g111060 | 27.848 | 316 | 188 | 13 | 48 | 333 | 25 | 330 | 9.22e-28 | 112 |
| MsG0880045909.01.T01 | MTR_7g079130 | 51.087 | 92 | 43 | 2 | 251 | 341 | 7 | 97 | 3.12e-26 | 100 |
| MsG0880045909.01.T01 | MTR_7g111050 | 29.682 | 283 | 166 | 13 | 82 | 340 | 63 | 336 | 6.05e-24 | 101 |
| MsG0880045909.01.T01 | MTR_3g029560 | 32.243 | 214 | 116 | 7 | 136 | 343 | 49 | 239 | 5.59e-22 | 93.6 |
| MsG0880045909.01.T01 | MTR_2g047960 | 53.165 | 79 | 37 | 0 | 134 | 212 | 7 | 85 | 9.98e-22 | 89.0 |
| MsG0880045909.01.T01 | MTR_7g078310 | 40.136 | 147 | 73 | 6 | 75 | 218 | 114 | 248 | 6.64e-21 | 91.3 |
| MsG0880045909.01.T01 | MTR_8g087510 | 39.231 | 130 | 73 | 5 | 166 | 293 | 23 | 148 | 5.31e-18 | 80.9 |
| MsG0880045909.01.T01 | MTR_7g079260 | 40.000 | 90 | 36 | 2 | 267 | 355 | 7 | 79 | 7.57e-13 | 64.7 |
| MsG0880045909.01.T01 | MTR_7g111050 | 26.639 | 244 | 153 | 11 | 82 | 303 | 58 | 297 | 1.73e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045909.01.T01 | AT5G43060 | 64.507 | 355 | 101 | 6 | 9 | 345 | 10 | 357 | 2.07e-164 | 468 |
| MsG0880045909.01.T01 | AT1G47128 | 61.236 | 356 | 112 | 5 | 8 | 345 | 9 | 356 | 8.95e-163 | 463 |
| MsG0880045909.01.T01 | AT4G36880 | 62.798 | 336 | 119 | 2 | 17 | 346 | 31 | 366 | 1.13e-158 | 450 |
| MsG0880045909.01.T01 | AT3G19390 | 61.318 | 349 | 121 | 6 | 1 | 342 | 5 | 346 | 1.27e-157 | 450 |
| MsG0880045909.01.T01 | AT3G19400 | 59.118 | 340 | 128 | 7 | 19 | 353 | 27 | 360 | 5.18e-143 | 409 |
| MsG0880045909.01.T01 | AT4G23520 | 53.868 | 349 | 145 | 7 | 9 | 348 | 15 | 356 | 1.74e-134 | 387 |
| MsG0880045909.01.T01 | AT3G48340 | 53.529 | 340 | 150 | 4 | 9 | 342 | 7 | 344 | 1.91e-128 | 372 |
| MsG0880045909.01.T01 | AT1G20850 | 53.145 | 318 | 145 | 2 | 25 | 342 | 41 | 354 | 9.51e-126 | 365 |
| MsG0880045909.01.T01 | AT4G11310 | 54.194 | 310 | 137 | 4 | 34 | 342 | 48 | 353 | 2.59e-121 | 354 |
| MsG0880045909.01.T01 | AT4G11320 | 48.108 | 370 | 169 | 5 | 3 | 353 | 6 | 371 | 4.88e-121 | 354 |
| MsG0880045909.01.T01 | AT4G11320 | 48.108 | 370 | 169 | 5 | 3 | 353 | 6 | 371 | 4.88e-121 | 354 |
| MsG0880045909.01.T01 | AT4G35350 | 49.704 | 338 | 157 | 4 | 13 | 342 | 21 | 353 | 1.33e-120 | 352 |
| MsG0880045909.01.T01 | AT5G50260 | 50.289 | 346 | 165 | 5 | 1 | 342 | 1 | 343 | 4.73e-120 | 351 |
| MsG0880045909.01.T01 | AT1G09850 | 49.249 | 333 | 162 | 3 | 11 | 342 | 8 | 334 | 1.25e-116 | 345 |
| MsG0880045909.01.T01 | AT1G06260 | 50.000 | 344 | 161 | 6 | 2 | 342 | 8 | 343 | 1.06e-115 | 339 |
| MsG0880045909.01.T01 | AT5G45890 | 49.708 | 342 | 160 | 7 | 4 | 341 | 12 | 345 | 1.31e-112 | 332 |
| MsG0880045909.01.T01 | AT3G48350 | 48.991 | 347 | 169 | 6 | 1 | 342 | 1 | 344 | 1.69e-112 | 332 |
| MsG0880045909.01.T01 | AT3G43960 | 49.716 | 352 | 155 | 13 | 15 | 355 | 18 | 358 | 7.98e-105 | 313 |
| MsG0880045909.01.T01 | AT3G19400 | 58.015 | 262 | 100 | 6 | 19 | 275 | 27 | 283 | 1.45e-104 | 309 |
| MsG0880045909.01.T01 | AT2G27420 | 45.714 | 350 | 178 | 8 | 1 | 341 | 1 | 347 | 4.73e-97 | 292 |
| MsG0880045909.01.T01 | AT2G34080 | 42.151 | 344 | 192 | 5 | 1 | 341 | 5 | 344 | 3.81e-94 | 285 |
| MsG0880045909.01.T01 | AT3G49340 | 42.733 | 344 | 185 | 7 | 6 | 341 | 1 | 340 | 5.92e-91 | 276 |
| MsG0880045909.01.T01 | AT1G29080 | 41.108 | 343 | 193 | 7 | 4 | 341 | 7 | 345 | 1.11e-88 | 271 |
| MsG0880045909.01.T01 | AT4G35350 | 49.801 | 251 | 121 | 3 | 25 | 275 | 41 | 286 | 2.34e-87 | 265 |
| MsG0880045909.01.T01 | AT1G29090 | 42.693 | 349 | 183 | 9 | 6 | 341 | 10 | 354 | 2.98e-86 | 265 |
| MsG0880045909.01.T01 | AT3G48350 | 45.161 | 279 | 147 | 4 | 1 | 275 | 1 | 277 | 3.44e-76 | 237 |
| MsG0880045909.01.T01 | AT5G60360 | 43.182 | 308 | 152 | 9 | 41 | 341 | 65 | 356 | 1.30e-74 | 235 |
| MsG0880045909.01.T01 | AT1G29110 | 35.777 | 341 | 196 | 6 | 10 | 341 | 7 | 333 | 7.02e-73 | 229 |
| MsG0880045909.01.T01 | AT5G60360 | 42.857 | 308 | 152 | 10 | 41 | 341 | 65 | 355 | 4.25e-72 | 228 |
| MsG0880045909.01.T01 | AT5G60360 | 43.206 | 287 | 145 | 8 | 41 | 320 | 65 | 340 | 3.53e-70 | 224 |
| MsG0880045909.01.T01 | AT3G45310 | 41.883 | 308 | 156 | 9 | 41 | 341 | 65 | 356 | 3.45e-69 | 221 |
| MsG0880045909.01.T01 | AT3G45310 | 41.558 | 308 | 156 | 10 | 41 | 341 | 65 | 355 | 1.32e-66 | 214 |
| MsG0880045909.01.T01 | AT4G39090 | 36.624 | 314 | 172 | 6 | 22 | 319 | 41 | 343 | 1.26e-62 | 204 |
| MsG0880045909.01.T01 | AT2G21430 | 35.922 | 309 | 171 | 6 | 27 | 319 | 43 | 340 | 1.67e-60 | 199 |
| MsG0880045909.01.T01 | AT3G54940 | 35.692 | 325 | 179 | 8 | 35 | 338 | 51 | 366 | 4.34e-59 | 195 |
| MsG0880045909.01.T01 | AT4G16190 | 35.987 | 314 | 173 | 9 | 28 | 321 | 45 | 350 | 2.07e-55 | 186 |
| MsG0880045909.01.T01 | AT3G54940 | 35.622 | 233 | 133 | 4 | 35 | 257 | 51 | 276 | 7.19e-42 | 147 |
| MsG0880045909.01.T01 | AT1G02305 | 29.073 | 313 | 181 | 14 | 73 | 354 | 59 | 361 | 8.36e-26 | 106 |
| MsG0880045909.01.T01 | AT4G01610 | 27.018 | 285 | 176 | 11 | 72 | 333 | 55 | 330 | 1.17e-22 | 97.8 |
| MsG0880045909.01.T01 | AT4G01610 | 26.316 | 285 | 178 | 11 | 72 | 333 | 55 | 330 | 1.33e-20 | 92.0 |
| MsG0880045909.01.T01 | AT1G02300 | 30.516 | 213 | 117 | 9 | 144 | 333 | 146 | 350 | 3.42e-16 | 79.3 |
| MsG0880045909.01.T01 | AT2G22160 | 30.851 | 94 | 60 | 1 | 51 | 144 | 10 | 98 | 4.15e-11 | 59.7 |
Find 107 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATATCGCAACATGTATT+TGG | 0.152793 | 8:+66287452 | MsG0880045909.01.T01:CDS |
| ATTGAATTATATATGCTTAT+TGG | 0.155563 | 8:+66289899 | MsG0880045909.01.T01:three_prime_UTR |
| ATCAAAATGCTTACCCTTGT+TGG | 0.271444 | 8:-66289039 | None:intergenic |
| CTGAAAACGGTGTGGATTAT+TGG | 0.272055 | 8:+66289664 | MsG0880045909.01.T01:CDS |
| GGAACTCATGGGGCACAAAC+TGG | 0.305715 | 8:+66289694 | MsG0880045909.01.T01:CDS |
| GGTGTGGTTGTTGTTGGATA+TGG | 0.309222 | 8:+66289639 | MsG0880045909.01.T01:CDS |
| TTTGAATTCATCGTTGAAAA+TGG | 0.320532 | 8:+66288961 | MsG0880045909.01.T01:CDS |
| TTCCTTGATCACTTTGTCAT+TGG | 0.330785 | 8:+66287221 | MsG0880045909.01.T01:CDS |
| CATAAGGTGTATAATGGTTT+AGG | 0.340198 | 8:+66287312 | MsG0880045909.01.T01:CDS |
| TGTACTTCACAGGAAGTTGC+TGG | 0.341497 | 8:+66288800 | MsG0880045909.01.T01:intron |
| CTAAACCATTATACACCTTA+TGG | 0.348204 | 8:-66287311 | None:intergenic |
| TTGCTATTGAGGCCGGTGGC+CGG | 0.359010 | 8:+66289334 | MsG0880045909.01.T01:CDS |
| ACCATACTTCACTGGGTATG+AGG | 0.376443 | 8:-66289793 | None:intergenic |
| AATTCCACACTTTCCTGTAT+TGG | 0.376785 | 8:-66289760 | None:intergenic |
| CCGGTGACCGGTGGTGATCT+TGG | 0.378957 | 8:-66287511 | None:intergenic |
| AAACACCATAAGGTGTATAA+TGG | 0.383316 | 8:+66287306 | MsG0880045909.01.T01:CDS |
| AAAGAAGAGCAAGGATGTTA+TGG | 0.388472 | 8:-66287199 | None:intergenic |
| CAAATTGATATTTGATATTG+AGG | 0.396409 | 8:-66289970 | None:intergenic |
| TGCTATTGAGGCCGGTGGCC+GGG | 0.400604 | 8:+66289335 | MsG0880045909.01.T01:CDS |
| GGTTGCCTGTGCATGTTGAT+TGG | 0.401016 | 8:+66287556 | MsG0880045909.01.T01:CDS |
| GCCAAGGTAGTGAGCATTGA+TGG | 0.412005 | 8:+66289243 | MsG0880045909.01.T01:CDS |
| GATCATGGTGTGGTTGTTGT+TGG | 0.414909 | 8:+66289633 | MsG0880045909.01.T01:CDS |
| GAATATCGCAACATGTATTT+GGG | 0.415509 | 8:+66287453 | MsG0880045909.01.T01:CDS |
| ATAAGCATATATAATTCAAT+AGG | 0.419418 | 8:-66289896 | None:intergenic |
| GCCTCATACCCAGTGAAGTA+TGG | 0.426327 | 8:+66289792 | MsG0880045909.01.T01:CDS |
| CAAAATTACACATACAAAGT+AGG | 0.430615 | 8:+66287399 | MsG0880045909.01.T01:CDS |
| TTGATGCCATGGTTGGTGTT+TGG | 0.432551 | 8:-66287173 | None:intergenic |
| GAACTCATGGGGCACAAACT+GGG | 0.439893 | 8:+66289695 | MsG0880045909.01.T01:CDS |
| CTACCCTCAAATCCCTTGTA+TGG | 0.453158 | 8:-66289009 | None:intergenic |
| GTGTTTGGCTACGGAGAGAA+AGG | 0.453638 | 8:-66287158 | None:intergenic |
| TTTAACACTTGAGATATTGT+TGG | 0.455834 | 8:-66289869 | None:intergenic |
| TGCGATAGAGCTTTCAATGA+AGG | 0.465031 | 8:+66288910 | MsG0880045909.01.T01:CDS |
| GCTATAAACAAAATAGTGAC+AGG | 0.472984 | 8:+66288850 | MsG0880045909.01.T01:CDS |
| GGCTTTGCAACTCTATCAAT+CGG | 0.477377 | 8:+66289356 | MsG0880045909.01.T01:CDS |
| GTTGGATATGGTTCTGAAAA+CGG | 0.483288 | 8:+66289651 | MsG0880045909.01.T01:CDS |
| TATCCATACAAGGGATTTGA+GGG | 0.489241 | 8:+66289006 | MsG0880045909.01.T01:CDS |
| TTAGGCTTTGAAGAACTAGT+TGG | 0.494350 | 8:-66287131 | None:intergenic |
| CCATGGTTGGTGTTTGGCTA+CGG | 0.499965 | 8:-66287167 | None:intergenic |
| ATTGGTTGGTGAGGAACTCA+TGG | 0.501730 | 8:+66289682 | MsG0880045909.01.T01:CDS |
| GGCACAAACTGGGGTGAAGA+AGG | 0.502960 | 8:+66289705 | MsG0880045909.01.T01:CDS |
| ATGGTTGGTAAAACACCATA+AGG | 0.503486 | 8:+66287296 | MsG0880045909.01.T01:CDS |
| TGCCAATGACAAAGTGATCA+AGG | 0.505373 | 8:-66287223 | None:intergenic |
| CTATCCATACAAGGGATTTG+AGG | 0.516329 | 8:+66289005 | MsG0880045909.01.T01:CDS |
| GTTGCTCATATCAAAGATCA+AGG | 0.516348 | 8:+66287594 | MsG0880045909.01.T01:CDS |
| TGGTAGATGTGGAACAAACT+TGG | 0.516650 | 8:+66289611 | MsG0880045909.01.T01:CDS |
| TCCATCAATGCTCACTACCT+TGG | 0.527147 | 8:-66289244 | None:intergenic |
| ATTAAAAGCATACCGGTGAC+CGG | 0.528807 | 8:-66287523 | None:intergenic |
| GATCACTTTGTCATTGGCAA+TGG | 0.530628 | 8:+66287227 | MsG0880045909.01.T01:CDS |
| ACCTGTGAGTGTTGCTATTG+AGG | 0.533824 | 8:+66289323 | MsG0880045909.01.T01:CDS |
| AAAATTACACATACAAAGTA+GGG | 0.535927 | 8:+66287400 | MsG0880045909.01.T01:CDS |
| ATCAAAGATCAAGGAAGTTG+TGG | 0.544285 | 8:+66287603 | MsG0880045909.01.T01:CDS |
| AAACTCCTCGTTACTACGCA+TGG | 0.546801 | 8:-66287256 | None:intergenic |
| TTATGAACATGTACGAGGAA+TGG | 0.548938 | 8:+66287277 | MsG0880045909.01.T01:CDS |
| TTCAATGAAGGGTGCAATGG+TGG | 0.551502 | 8:+66288922 | MsG0880045909.01.T01:CDS |
| CAAATAACAGTAGTGAAAGC+TGG | 0.551939 | 8:-66289995 | None:intergenic |
| GAGTTGCAAAGCCCGGCCAC+CGG | 0.552609 | 8:-66289346 | None:intergenic |
| GCGATAGAGCTTTCAATGAA+GGG | 0.552985 | 8:+66288911 | MsG0880045909.01.T01:CDS |
| GCCTCAATAGCAACACTCAC+AGG | 0.554592 | 8:-66289324 | None:intergenic |
| TACGGAGAGAAAGGGTGGTT+AGG | 0.557405 | 8:-66287149 | None:intergenic |
| ATTGATAGAGTTGCAAAGCC+CGG | 0.557641 | 8:-66289353 | None:intergenic |
| GTACTTCACAGGAAGTTGCT+GGG | 0.560605 | 8:+66288801 | MsG0880045909.01.T01:intron |
| TGAACAAGACTATCCATACA+AGG | 0.565666 | 8:+66288996 | MsG0880045909.01.T01:CDS |
| GACCTCCAATCAACATGCAC+AGG | 0.565711 | 8:-66287561 | None:intergenic |
| GAATTCATCGTTGAAAATGG+TGG | 0.566710 | 8:+66288964 | MsG0880045909.01.T01:CDS |
| AGGGTGCAATGGTGGTCTCA+TGG | 0.567177 | 8:+66288930 | MsG0880045909.01.T01:CDS |
| CCAAGATCACCACCGGTCAC+CGG | 0.568353 | 8:+66287511 | MsG0880045909.01.T01:CDS |
| ATGGTGATTGATGCCATGGT+TGG | 0.571355 | 8:-66287180 | None:intergenic |
| GGTGTATTTACTGGTAGATG+TGG | 0.575486 | 8:+66289600 | MsG0880045909.01.T01:CDS |
| AACTCATGGGGCACAAACTG+GGG | 0.578307 | 8:+66289696 | MsG0880045909.01.T01:CDS |
| TTGGTTGGTGAGGAACTCAT+GGG | 0.579060 | 8:+66289683 | MsG0880045909.01.T01:CDS |
| TGCCTGTGCATGTTGATTGG+AGG | 0.581463 | 8:+66287559 | MsG0880045909.01.T01:CDS |
| ACTTGAGATATTGTTGGTGG+TGG | 0.582028 | 8:-66289863 | None:intergenic |
| GTGAGTGTTGCTATTGAGGC+CGG | 0.589717 | 8:+66289327 | MsG0880045909.01.T01:CDS |
| AAGACCAATACAGGAAAGTG+TGG | 0.590273 | 8:+66289756 | MsG0880045909.01.T01:CDS |
| TGTTATGGTGATTGATGCCA+TGG | 0.590826 | 8:-66287184 | None:intergenic |
| GAACATGTACGAGGAATGGT+TGG | 0.591249 | 8:+66287281 | MsG0880045909.01.T01:CDS |
| AACACTTGAGATATTGTTGG+TGG | 0.593791 | 8:-66289866 | None:intergenic |
| CACCGGAATTAAAAGCATAC+CGG | 0.600520 | 8:-66287530 | None:intergenic |
| AGGGTAGATGTGATCCAACA+AGG | 0.602721 | 8:+66289025 | MsG0880045909.01.T01:CDS |
| GCTTTCAATGAAGGGTGCAA+TGG | 0.603342 | 8:+66288919 | MsG0880045909.01.T01:CDS |
| ATGCACAGGCAACCGATCAC+CGG | 0.604071 | 8:-66287547 | None:intergenic |
| GTTTAGGAGAGAAAGATCGA+AGG | 0.607500 | 8:+66287328 | MsG0880045909.01.T01:CDS |
| CACGTCCATGCGTAGTAACG+AGG | 0.608727 | 8:+66287251 | MsG0880045909.01.T01:CDS |
| TGTGGAACAAACTTGGATCA+TGG | 0.612535 | 8:+66289618 | MsG0880045909.01.T01:CDS |
| GATCAAGGAAAAGAAGAGCA+AGG | 0.613129 | 8:-66287208 | None:intergenic |
| CATGTTGATTGGAGGTCGAA+AGG | 0.619027 | 8:+66287567 | MsG0880045909.01.T01:CDS |
| GAGGAGTGATGCCAAACGTA+GGG | 0.622581 | 8:+66287479 | MsG0880045909.01.T01:CDS |
| TGTTTGGCTACGGAGAGAAA+GGG | 0.628243 | 8:-66287157 | None:intergenic |
| ATGAAAACCAAGATCACCAC+CGG | 0.640415 | 8:+66287504 | MsG0880045909.01.T01:CDS |
| AAACGGTGTGGATTATTGGT+TGG | 0.646909 | 8:+66289668 | MsG0880045909.01.T01:CDS |
| CTATAAACAAAATAGTGACA+GGG | 0.655594 | 8:+66288851 | MsG0880045909.01.T01:CDS |
| AGTGTTGCTATTGAGGCCGG+TGG | 0.658752 | 8:+66289330 | MsG0880045909.01.T01:CDS |
| CGAGGAGTGATGCCAAACGT+AGG | 0.659483 | 8:+66287478 | MsG0880045909.01.T01:CDS |
| GTGTGGATTATTGGTTGGTG+AGG | 0.664128 | 8:+66289673 | MsG0880045909.01.T01:CDS |
| CCGTAGCCAAACACCAACCA+TGG | 0.667989 | 8:+66287167 | MsG0880045909.01.T01:exon |
| TTGGCTACGGAGAGAAAGGG+TGG | 0.676716 | 8:-66287154 | None:intergenic |
| AAAAGCATACCGGTGACCGG+TGG | 0.684937 | 8:-66287520 | None:intergenic |
| GGGTAGATGTGATCCAACAA+GGG | 0.690677 | 8:+66289026 | MsG0880045909.01.T01:CDS |
| AACAAACTTGGATCATGGTG+TGG | 0.692394 | 8:+66289623 | MsG0880045909.01.T01:CDS |
| GAACAAGACTATCCATACAA+GGG | 0.692415 | 8:+66288997 | MsG0880045909.01.T01:CDS |
| GCAACATGTATTTGGGCACG+AGG | 0.696732 | 8:+66287460 | MsG0880045909.01.T01:CDS |
| TTTGTTTATAGCTTCCACTG+TGG | 0.711165 | 8:-66288839 | None:intergenic |
| ATATGGTTCTGAAAACGGTG+TGG | 0.711541 | 8:+66289656 | MsG0880045909.01.T01:CDS |
| TGGTTGGTGAGGAACTCATG+GGG | 0.718625 | 8:+66289684 | MsG0880045909.01.T01:CDS |
| GTTTGCTGATATGACTAACG+AGG | 0.737032 | 8:+66287431 | MsG0880045909.01.T01:CDS |
| GGAGTTTATGAACATGTACG+AGG | 0.760119 | 8:+66287272 | MsG0880045909.01.T01:CDS |
| GTTCTCAACAATAGCCACAG+TGG | 0.769143 | 8:+66288825 | MsG0880045909.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTATTAAGAATATAAAT+AGG | + | Chr8:66288046-66288065 | MsG0880045909.01.T01:intron | 10.0% |
| !! | GATAATATTAAAAATAACTA+TGG | + | Chr8:66289103-66289122 | MsG0880045909.01.T01:intron | 10.0% |
| !!! | AACTATTATAAATTTTTTCA+GGG | + | Chr8:66289579-66289598 | MsG0880045909.01.T01:intron | 10.0% |
| !!! | ATTGTTTTTCTAATATTATA+TGG | + | Chr8:66289196-66289215 | MsG0880045909.01.T01:intron | 10.0% |
| !!! | TAGTATTTTTTATTAGTATA+AGG | - | Chr8:66289080-66289099 | None:intergenic | 10.0% |
| !!! | TTGATCATTAATTTTATTTT+AGG | + | Chr8:66288575-66288594 | MsG0880045909.01.T01:intron | 10.0% |
| !! | AAAAGGATTTAAACATATAT+CGG | - | Chr8:66287795-66287814 | None:intergenic | 15.0% |
| !! | AAAGTAAATTGCAAAATTAT+AGG | - | Chr8:66287648-66287667 | None:intergenic | 15.0% |
| !! | AAATTTAAATAAAGTCCTTA+AGG | - | Chr8:66287751-66287770 | None:intergenic | 15.0% |
| !! | AACAAACTTTGATTAAAAAT+TGG | + | Chr8:66288658-66288677 | MsG0880045909.01.T01:intron | 15.0% |
| !! | AAGAACTATATAAAAGATAA+AGG | - | Chr8:66287857-66287876 | None:intergenic | 15.0% |
| !! | AATTTAAATAAAGTCCTTAA+GGG | - | Chr8:66287750-66287769 | None:intergenic | 15.0% |
| !! | ATAAGCATATATAATTCAAT+AGG | - | Chr8:66289899-66289918 | None:intergenic | 15.0% |
| !! | ATTGAATTATATATGCTTAT+TGG | + | Chr8:66289899-66289918 | MsG0880045909.01.T01:three_prime_UTR | 15.0% |
| !! | CAAAAAGAACTATATAAAAA+AGG | - | Chr8:66287812-66287831 | None:intergenic | 15.0% |
| !! | CTTATTAATTATTCATACTT+TGG | + | Chr8:66288612-66288631 | MsG0880045909.01.T01:intron | 15.0% |
| !! | TTTAGCACAAATAAATTAAA+GGG | - | Chr8:66288640-66288659 | None:intergenic | 15.0% |
| !!! | AAAAAAGGTTACTTTTTTTT+TGG | + | Chr8:66287703-66287722 | MsG0880045909.01.T01:intron | 15.0% |
| !!! | AAAAAAGTAACCTTTTTTTT+AGG | - | Chr8:66287701-66287720 | None:intergenic | 15.0% |
| !!! | AATATTTTTACTCAATTACA+TGG | + | Chr8:66288374-66288393 | MsG0880045909.01.T01:intron | 15.0% |
| !!! | GAAATTTTTAAGGATAATTT+AGG | + | Chr8:66287354-66287373 | MsG0880045909.01.T01:CDS | 15.0% |
| !!! | GAACTATTATAAATTTTTTC+AGG | + | Chr8:66289578-66289597 | MsG0880045909.01.T01:intron | 15.0% |
| !!! | GGAATTTATGTATATATTTT+TGG | - | Chr8:66288097-66288116 | None:intergenic | 15.0% |
| !!! | TTAAGCTAATAAATTTTCAT+CGG | + | Chr8:66288216-66288235 | MsG0880045909.01.T01:intron | 15.0% |
| !!! | TTTTTTTTAAATACTTTGAG+AGG | + | Chr8:66287970-66287989 | MsG0880045909.01.T01:intron | 15.0% |
| !!! | TTTTTTTTGGTACAAAAAAA+AGG | + | Chr8:66287716-66287735 | MsG0880045909.01.T01:intron | 15.0% |
| !! | AAAATTACACATACAAAGTA+GGG | + | Chr8:66287400-66287419 | MsG0880045909.01.T01:CDS | 20.0% |
| !! | CAAATTGATATTTGATATTG+AGG | - | Chr8:66289973-66289992 | None:intergenic | 20.0% |
| !! | CACTCATATTCTAAATATAT+TGG | - | Chr8:66288118-66288137 | None:intergenic | 20.0% |
| !! | GATTAAAAATTGGTAAGTAA+TGG | + | Chr8:66288668-66288687 | MsG0880045909.01.T01:intron | 20.0% |
| !! | GTTATTTGATCAAAATTAGA+CGG | + | Chr8:66289418-66289437 | MsG0880045909.01.T01:intron | 20.0% |
| !! | GTTTAGCACAAATAAATTAA+AGG | - | Chr8:66288641-66288660 | None:intergenic | 20.0% |
| !! | TATATAATAATAGATGCAAG+TGG | - | Chr8:66287915-66287934 | None:intergenic | 20.0% |
| !!! | AGTAGTTTTTTTTTTCTATC+TGG | + | Chr8:66288310-66288329 | MsG0880045909.01.T01:intron | 20.0% |
| !!! | AGTTAAATATTGGACTATTT+TGG | + | Chr8:66288733-66288752 | MsG0880045909.01.T01:intron | 20.0% |
| !!! | ATTTTTGGTAATTGTACTTT+TGG | - | Chr8:66288082-66288101 | None:intergenic | 20.0% |
| ! | AAAAATTGGTAAGTAATGGT+AGG | + | Chr8:66288672-66288691 | MsG0880045909.01.T01:intron | 25.0% |
| ! | AATAGTCCAATATTTAACTG+AGG | - | Chr8:66288732-66288751 | None:intergenic | 25.0% |
| ! | CAAAATTACACATACAAAGT+AGG | + | Chr8:66287399-66287418 | MsG0880045909.01.T01:CDS | 25.0% |
| ! | CTATAAACAAAATAGTGACA+GGG | + | Chr8:66288851-66288870 | MsG0880045909.01.T01:CDS | 25.0% |
| ! | TTTAACACTTGAGATATTGT+TGG | - | Chr8:66289872-66289891 | None:intergenic | 25.0% |
| ! | TTTGAATTCATCGTTGAAAA+TGG | + | Chr8:66288961-66288980 | MsG0880045909.01.T01:CDS | 25.0% |
| !! | AATGCATTTTCATTATAAGC+TGG | - | Chr8:66289282-66289301 | None:intergenic | 25.0% |
| !! | ATTTTCAACGATGAATTCAA+AGG | - | Chr8:66288962-66288981 | None:intergenic | 25.0% |
| !! | GCAATTTACTTTGTTTGTTA+AGG | + | Chr8:66287656-66287675 | MsG0880045909.01.T01:intron | 25.0% |
| !! | GCTTCAAGCTTTATAAAATT+TGG | - | Chr8:66289547-66289566 | None:intergenic | 25.0% |
| !! | TTACTTTGTTTGTTAAGGTT+TGG | + | Chr8:66287661-66287680 | MsG0880045909.01.T01:intron | 25.0% |
| !!! | AAGCTTTAGATAAGACTTTT+TGG | + | Chr8:66288536-66288555 | MsG0880045909.01.T01:intron | 25.0% |
| !!! | TCGAAGGTTTGAAATTTTTA+AGG | + | Chr8:66287344-66287363 | MsG0880045909.01.T01:CDS | 25.0% |
| !!! | TCTTATAATTTTAGAAGTCG+AGG | - | Chr8:66289455-66289474 | None:intergenic | 25.0% |
| AAAAGGTTACTTATCCCTTA+AGG | + | Chr8:66287733-66287752 | MsG0880045909.01.T01:intron | 30.0% | |
| AAACACCATAAGGTGTATAA+TGG | + | Chr8:66287306-66287325 | MsG0880045909.01.T01:CDS | 30.0% | |
| AAATTAAGATCACGTGTTCA+TGG | - | Chr8:66288460-66288479 | None:intergenic | 30.0% | |
| AATGTGAAAAAGACCAATAC+AGG | + | Chr8:66289747-66289766 | MsG0880045909.01.T01:CDS | 30.0% | |
| CATAAGGTGTATAATGGTTT+AGG | + | Chr8:66287312-66287331 | MsG0880045909.01.T01:CDS | 30.0% | |
| CTAAACCATTATACACCTTA+TGG | - | Chr8:66287314-66287333 | None:intergenic | 30.0% | |
| GAATATCGCAACATGTATTT+GGG | + | Chr8:66287453-66287472 | MsG0880045909.01.T01:CDS | 30.0% | |
| GCTATAAACAAAATAGTGAC+AGG | + | Chr8:66288850-66288869 | MsG0880045909.01.T01:CDS | 30.0% | |
| GTATCAGATGCCTAAAAAAA+AGG | + | Chr8:66287688-66287707 | MsG0880045909.01.T01:intron | 30.0% | |
| GTTTGACCTCAGTTAAATAT+TGG | + | Chr8:66288723-66288742 | MsG0880045909.01.T01:intron | 30.0% | |
| TTAGAAGTCGAGGTTAAATA+TGG | - | Chr8:66289445-66289464 | None:intergenic | 30.0% | |
| ! | AAGAACTAGTTGGAAGTTTT+TGG | - | Chr8:66287124-66287143 | None:intergenic | 30.0% |
| ! | TACATTTTCTTGTACTTCAC+AGG | + | Chr8:66288790-66288809 | MsG0880045909.01.T01:intron | 30.0% |
| !! | AGTTGTGGTAAGTTTGTTTT+AGG | + | Chr8:66287618-66287637 | MsG0880045909.01.T01:intron | 30.0% |
| !! | TTGGTAATTGTACTTTTGGA+CGG | - | Chr8:66288078-66288097 | None:intergenic | 30.0% |
| !!! | GTTGTGGTAAGTTTGTTTTA+GGG | + | Chr8:66287619-66287638 | MsG0880045909.01.T01:intron | 30.0% |
| !!! | TTTTTTCAGGGTGTATTTAC+TGG | + | Chr8:66289591-66289610 | MsG0880045909.01.T01:intron | 30.0% |
| AAAGAAGAGCAAGGATGTTA+TGG | - | Chr8:66287202-66287221 | None:intergenic | 35.0% | |
| AACACTTGAGATATTGTTGG+TGG | - | Chr8:66289869-66289888 | None:intergenic | 35.0% | |
| AATGCTACAGAAAAATGCCA+AGG | + | Chr8:66289227-66289246 | MsG0880045909.01.T01:intron | 35.0% | |
| AATTCCACACTTTCCTGTAT+TGG | - | Chr8:66289763-66289782 | None:intergenic | 35.0% | |
| ATCAAAATGCTTACCCTTGT+TGG | - | Chr8:66289042-66289061 | None:intergenic | 35.0% | |
| ATCAAAGATCAAGGAAGTTG+TGG | + | Chr8:66287603-66287622 | MsG0880045909.01.T01:CDS | 35.0% | |
| ATTGGTAAGTAATGGTAGGT+TGG | + | Chr8:66288676-66288695 | MsG0880045909.01.T01:intron | 35.0% | |
| CAAATAACAGTAGTGAAAGC+TGG | - | Chr8:66289998-66290017 | None:intergenic | 35.0% | |
| GAACAAGACTATCCATACAA+GGG | + | Chr8:66288997-66289016 | MsG0880045909.01.T01:CDS | 35.0% | |
| GAATTCATCGTTGAAAATGG+TGG | + | Chr8:66288964-66288983 | MsG0880045909.01.T01:CDS | 35.0% | |
| GGAATATCGCAACATGTATT+TGG | + | Chr8:66287452-66287471 | MsG0880045909.01.T01:CDS | 35.0% | |
| GTTGCTCATATCAAAGATCA+AGG | + | Chr8:66287594-66287613 | MsG0880045909.01.T01:CDS | 35.0% | |
| TATCCATACAAGGGATTTGA+GGG | + | Chr8:66289006-66289025 | MsG0880045909.01.T01:CDS | 35.0% | |
| TGAACAAGACTATCCATACA+AGG | + | Chr8:66288996-66289015 | MsG0880045909.01.T01:CDS | 35.0% | |
| TTATGAACATGTACGAGGAA+TGG | + | Chr8:66287277-66287296 | MsG0880045909.01.T01:CDS | 35.0% | |
| TTCCTTGATCACTTTGTCAT+TGG | + | Chr8:66287221-66287240 | MsG0880045909.01.T01:CDS | 35.0% | |
| TTTGTTTATAGCTTCCACTG+TGG | - | Chr8:66288842-66288861 | None:intergenic | 35.0% | |
| ! | ACTTTCTCTTTTCCCAACAA+AGG | + | Chr8:66287889-66287908 | MsG0880045909.01.T01:intron | 35.0% |
| !! | AGTTTTGACCATACTTCACT+GGG | - | Chr8:66289803-66289822 | None:intergenic | 35.0% |
| !! | ATGCTTTTAATTCCGGTGAT+CGG | + | Chr8:66287535-66287554 | MsG0880045909.01.T01:CDS | 35.0% |
| !! | ATGGTTGGTAAAACACCATA+AGG | + | Chr8:66287296-66287315 | MsG0880045909.01.T01:CDS | 35.0% |
| !! | GTTGGATATGGTTCTGAAAA+CGG | + | Chr8:66289651-66289670 | MsG0880045909.01.T01:CDS | 35.0% |
| !! | TTAGGCTTTGAAGAACTAGT+TGG | - | Chr8:66287134-66287153 | None:intergenic | 35.0% |
| AACAAACTTGGATCATGGTG+TGG | + | Chr8:66289623-66289642 | MsG0880045909.01.T01:CDS | 40.0% | |
| AAGACCAATACAGGAAAGTG+TGG | + | Chr8:66289756-66289775 | MsG0880045909.01.T01:CDS | 40.0% | |
| ATGAAAACCAAGATCACCAC+CGG | + | Chr8:66287504-66287523 | MsG0880045909.01.T01:CDS | 40.0% | |
| ATTGATAGAGTTGCAAAGCC+CGG | - | Chr8:66289356-66289375 | None:intergenic | 40.0% | |
| CTATCCATACAAGGGATTTG+AGG | + | Chr8:66289005-66289024 | MsG0880045909.01.T01:CDS | 40.0% | |
| GATCAAGGAAAAGAAGAGCA+AGG | - | Chr8:66287211-66287230 | None:intergenic | 40.0% | |
| GATCACTTTGTCATTGGCAA+TGG | + | Chr8:66287227-66287246 | MsG0880045909.01.T01:CDS | 40.0% | |
| GCGATAGAGCTTTCAATGAA+GGG | + | Chr8:66288911-66288930 | MsG0880045909.01.T01:CDS | 40.0% | |
| GGAGTTTATGAACATGTACG+AGG | + | Chr8:66287272-66287291 | MsG0880045909.01.T01:CDS | 40.0% | |
| GGCTTTGCAACTCTATCAAT+CGG | + | Chr8:66289356-66289375 | MsG0880045909.01.T01:CDS | 40.0% | |
| GGTGTATTTACTGGTAGATG+TGG | + | Chr8:66289600-66289619 | MsG0880045909.01.T01:CDS | 40.0% | |
| GTTTAGGAGAGAAAGATCGA+AGG | + | Chr8:66287328-66287347 | MsG0880045909.01.T01:CDS | 40.0% | |
| TGCCAATGACAAAGTGATCA+AGG | - | Chr8:66287226-66287245 | None:intergenic | 40.0% | |
| TGCGATAGAGCTTTCAATGA+AGG | + | Chr8:66288910-66288929 | MsG0880045909.01.T01:CDS | 40.0% | |
| TGGTAGATGTGGAACAAACT+TGG | + | Chr8:66289611-66289630 | MsG0880045909.01.T01:CDS | 40.0% | |
| TGTGGAACAAACTTGGATCA+TGG | + | Chr8:66289618-66289637 | MsG0880045909.01.T01:CDS | 40.0% | |
| TGTTATGGTGATTGATGCCA+TGG | - | Chr8:66287187-66287206 | None:intergenic | 40.0% | |
| ! | AAACGGTGTGGATTATTGGT+TGG | + | Chr8:66289668-66289687 | MsG0880045909.01.T01:CDS | 40.0% |
| ! | ACTTGAGATATTGTTGGTGG+TGG | - | Chr8:66289866-66289885 | None:intergenic | 40.0% |
| ! | ATTAAAAGCATACCGGTGAC+CGG | - | Chr8:66287526-66287545 | None:intergenic | 40.0% |
| ! | CACCGGAATTAAAAGCATAC+CGG | - | Chr8:66287533-66287552 | None:intergenic | 40.0% |
| ! | CTGAAAACGGTGTGGATTAT+TGG | + | Chr8:66289664-66289683 | MsG0880045909.01.T01:CDS | 40.0% |
| ! | GGTTTTCATAACCCTACGTT+TGG | - | Chr8:66287493-66287512 | None:intergenic | 40.0% |
| ! | GTTTGCTGATATGACTAACG+AGG | + | Chr8:66287431-66287450 | MsG0880045909.01.T01:CDS | 40.0% |
| !! | ATATGGTTCTGAAAACGGTG+TGG | + | Chr8:66289656-66289675 | MsG0880045909.01.T01:CDS | 40.0% |
| !! | CACCGGTATGCTTTTAATTC+CGG | + | Chr8:66287528-66287547 | MsG0880045909.01.T01:CDS | 40.0% |
| !! | GAGTTTTGACCATACTTCAC+TGG | - | Chr8:66289804-66289823 | None:intergenic | 40.0% |
| AAACTCCTCGTTACTACGCA+TGG | - | Chr8:66287259-66287278 | None:intergenic | 45.0% | |
| ACCATACTTCACTGGGTATG+AGG | - | Chr8:66289796-66289815 | None:intergenic | 45.0% | |
| AGATGCAAGTGGCCTTTGTT+GGG | - | Chr8:66287904-66287923 | None:intergenic | 45.0% | |
| AGGGTAGATGTGATCCAACA+AGG | + | Chr8:66289025-66289044 | MsG0880045909.01.T01:CDS | 45.0% | |
| ATGGTGATTGATGCCATGGT+TGG | - | Chr8:66287183-66287202 | None:intergenic | 45.0% | |
| CTACCCTCAAATCCCTTGTA+TGG | - | Chr8:66289012-66289031 | None:intergenic | 45.0% | |
| GAACATGTACGAGGAATGGT+TGG | + | Chr8:66287281-66287300 | MsG0880045909.01.T01:CDS | 45.0% | |
| GATCATGGTGTGGTTGTTGT+TGG | + | Chr8:66289633-66289652 | MsG0880045909.01.T01:CDS | 45.0% | |
| GGGTAGATGTGATCCAACAA+GGG | + | Chr8:66289026-66289045 | MsG0880045909.01.T01:CDS | 45.0% | |
| GTACTTCACAGGAAGTTGCT+GGG | + | Chr8:66288801-66288820 | MsG0880045909.01.T01:intron | 45.0% | |
| GTTCTCAACAATAGCCACAG+TGG | + | Chr8:66288825-66288844 | MsG0880045909.01.T01:CDS | 45.0% | |
| TAGATGCAAGTGGCCTTTGT+TGG | - | Chr8:66287905-66287924 | None:intergenic | 45.0% | |
| TCCATCAATGCTCACTACCT+TGG | - | Chr8:66289247-66289266 | None:intergenic | 45.0% | |
| TGTACTTCACAGGAAGTTGC+TGG | + | Chr8:66288800-66288819 | MsG0880045909.01.T01:intron | 45.0% | |
| TGTTTGGCTACGGAGAGAAA+GGG | - | Chr8:66287160-66287179 | None:intergenic | 45.0% | |
| ! | ACCTGTGAGTGTTGCTATTG+AGG | + | Chr8:66289323-66289342 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | CATGTTGATTGGAGGTCGAA+AGG | + | Chr8:66287567-66287586 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | GCTTTCAATGAAGGGTGCAA+TGG | + | Chr8:66288919-66288938 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | GGTGTGGTTGTTGTTGGATA+TGG | + | Chr8:66289639-66289658 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | GTGTGGATTATTGGTTGGTG+AGG | + | Chr8:66289673-66289692 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | TTCAATGAAGGGTGCAATGG+TGG | + | Chr8:66288922-66288941 | MsG0880045909.01.T01:CDS | 45.0% |
| ! | TTGATGCCATGGTTGGTGTT+TGG | - | Chr8:66287176-66287195 | None:intergenic | 45.0% |
| !! | ATTGGTTGGTGAGGAACTCA+TGG | + | Chr8:66289682-66289701 | MsG0880045909.01.T01:CDS | 45.0% |
| !! | TTGGTTGGTGAGGAACTCAT+GGG | + | Chr8:66289683-66289702 | MsG0880045909.01.T01:CDS | 45.0% |
| AACTCATGGGGCACAAACTG+GGG | + | Chr8:66289696-66289715 | MsG0880045909.01.T01:CDS | 50.0% | |
| GAACTCATGGGGCACAAACT+GGG | + | Chr8:66289695-66289714 | MsG0880045909.01.T01:CDS | 50.0% | |
| GACCTCCAATCAACATGCAC+AGG | - | Chr8:66287564-66287583 | None:intergenic | 50.0% | |
| GAGGAGTGATGCCAAACGTA+GGG | + | Chr8:66287479-66287498 | MsG0880045909.01.T01:CDS | 50.0% | |
| GCAACATGTATTTGGGCACG+AGG | + | Chr8:66287460-66287479 | MsG0880045909.01.T01:CDS | 50.0% | |
| GCCTCAATAGCAACACTCAC+AGG | - | Chr8:66289327-66289346 | None:intergenic | 50.0% | |
| GCCTCATACCCAGTGAAGTA+TGG | + | Chr8:66289792-66289811 | MsG0880045909.01.T01:CDS | 50.0% | |
| GGTTGCCTGTGCATGTTGAT+TGG | + | Chr8:66287556-66287575 | MsG0880045909.01.T01:CDS | 50.0% | |
| GTGTTTGGCTACGGAGAGAA+AGG | - | Chr8:66287161-66287180 | None:intergenic | 50.0% | |
| TACGGAGAGAAAGGGTGGTT+AGG | - | Chr8:66287152-66287171 | None:intergenic | 50.0% | |
| ! | CCATGGTTGGTGTTTGGCTA+CGG | - | Chr8:66287170-66287189 | None:intergenic | 50.0% |
| ! | GTGAGTGTTGCTATTGAGGC+CGG | + | Chr8:66289327-66289346 | MsG0880045909.01.T01:CDS | 50.0% |
| ! | TGCCTGTGCATGTTGATTGG+AGG | + | Chr8:66287559-66287578 | MsG0880045909.01.T01:CDS | 50.0% |
| !! | GCCAAGGTAGTGAGCATTGA+TGG | + | Chr8:66289243-66289262 | MsG0880045909.01.T01:CDS | 50.0% |
| !! | TGGTTGGTGAGGAACTCATG+GGG | + | Chr8:66289684-66289703 | MsG0880045909.01.T01:CDS | 50.0% |
| AGGGTGCAATGGTGGTCTCA+TGG | + | Chr8:66288930-66288949 | MsG0880045909.01.T01:CDS | 55.0% | |
| ATGCACAGGCAACCGATCAC+CGG | - | Chr8:66287550-66287569 | None:intergenic | 55.0% | |
| CACGTCCATGCGTAGTAACG+AGG | + | Chr8:66287251-66287270 | MsG0880045909.01.T01:CDS | 55.0% | |
| CCGTAGCCAAACACCAACCA+TGG | + | Chr8:66287167-66287186 | MsG0880045909.01.T01:exon | 55.0% | |
| CGAGGAGTGATGCCAAACGT+AGG | + | Chr8:66287478-66287497 | MsG0880045909.01.T01:CDS | 55.0% | |
| GGAACTCATGGGGCACAAAC+TGG | + | Chr8:66289694-66289713 | MsG0880045909.01.T01:CDS | 55.0% | |
| GGCACAAACTGGGGTGAAGA+AGG | + | Chr8:66289705-66289724 | MsG0880045909.01.T01:CDS | 55.0% | |
| TTGGCTACGGAGAGAAAGGG+TGG | - | Chr8:66287157-66287176 | None:intergenic | 55.0% | |
| ! | AAAAGCATACCGGTGACCGG+TGG | - | Chr8:66287523-66287542 | None:intergenic | 55.0% |
| ! | AGTGTTGCTATTGAGGCCGG+TGG | + | Chr8:66289330-66289349 | MsG0880045909.01.T01:CDS | 55.0% |
| CCAAGATCACCACCGGTCAC+CGG | + | Chr8:66287511-66287530 | MsG0880045909.01.T01:CDS | 60.0% | |
| ! | TTGCTATTGAGGCCGGTGGC+CGG | + | Chr8:66289334-66289353 | MsG0880045909.01.T01:CDS | 60.0% |
| CCGGTGACCGGTGGTGATCT+TGG | - | Chr8:66287514-66287533 | None:intergenic | 65.0% | |
| GAGTTGCAAAGCCCGGCCAC+CGG | - | Chr8:66289349-66289368 | None:intergenic | 65.0% | |
| TGCTATTGAGGCCGGTGGCC+GGG | + | Chr8:66289335-66289354 | MsG0880045909.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 66287118 | 66290048 | 66287118 | ID=MsG0880045909.01;Name=MsG0880045909.01 |
| Chr8 | mRNA | 66287118 | 66290048 | 66287118 | ID=MsG0880045909.01.T01;Parent=MsG0880045909.01;Name=MsG0880045909.01.T01;_AED=0.49;_eAED=0.49;_QI=68|1|1|1|1|1|4|197|355 |
| Chr8 | exon | 66287118 | 66287624 | 66287118 | ID=MsG0880045909.01.T01:exon:25239;Parent=MsG0880045909.01.T01 |
| Chr8 | exon | 66288812 | 66289047 | 66288812 | ID=MsG0880045909.01.T01:exon:25240;Parent=MsG0880045909.01.T01 |
| Chr8 | exon | 66289237 | 66289377 | 66289237 | ID=MsG0880045909.01.T01:exon:25241;Parent=MsG0880045909.01.T01 |
| Chr8 | exon | 66289600 | 66290048 | 66289600 | ID=MsG0880045909.01.T01:exon:25242;Parent=MsG0880045909.01.T01 |
| Chr8 | five_prime_UTR | 66287118 | 66287185 | 66287118 | ID=MsG0880045909.01.T01:five_prime_utr;Parent=MsG0880045909.01.T01 |
| Chr8 | CDS | 66287186 | 66287624 | 66287186 | ID=MsG0880045909.01.T01:cds;Parent=MsG0880045909.01.T01 |
| Chr8 | CDS | 66288812 | 66289047 | 66288812 | ID=MsG0880045909.01.T01:cds;Parent=MsG0880045909.01.T01 |
| Chr8 | CDS | 66289237 | 66289377 | 66289237 | ID=MsG0880045909.01.T01:cds;Parent=MsG0880045909.01.T01 |
| Chr8 | CDS | 66289600 | 66289851 | 66289600 | ID=MsG0880045909.01.T01:cds;Parent=MsG0880045909.01.T01 |
| Chr8 | three_prime_UTR | 66289852 | 66290048 | 66289852 | ID=MsG0880045909.01.T01:three_prime_utr;Parent=MsG0880045909.01.T01 |
| Gene Sequence |
| Protein sequence |
