AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011740 MtrunA17_Chr1g0160221 92.449 543 0 2 932 1433 1 543 0.0 1003
Msa0011740 MtrunA17_Chr1g0160221 89.773 264 0 1 349 585 1 264 4.56e-151 469
Msa0011740 MtrunA17_Chr6g0461541 84.288 541 42 4 935 1433 1 540 0.0 902
Msa0011740 MtrunA17_Chr6g0461541 81.992 261 20 1 352 585 1 261 2.53e-133 422
Msa0011740 MtrunA17_Chr1g0160211 90.055 362 12 1 585 922 35 396 0.0 674
Msa0011740 MtrunA17_Chr1g0160211 81.108 397 16 3 1 339 1 396 0.0 647
Msa0011740 MtrunA17_Chr2g0282161 26.577 523 317 14 960 1423 24 538 1.66e-49 186
Msa0011740 MtrunA17_Chr2g0282161 28.972 214 110 7 377 554 24 231 6.58e-16 82.8
Msa0011740 MtrunA17_Chr8g0380331 28.046 517 305 11 959 1413 23 534 3.47e-48 181
Msa0011740 MtrunA17_Chr8g0380331 28.959 221 121 5 376 563 23 240 9.29e-15 79.3
Msa0011740 MtrunA17_Chr5g0440381 25.191 524 332 12 942 1413 11 526 4.59e-44 169
Msa0011740 MtrunA17_Chr5g0440381 27.315 216 122 5 359 545 11 220 3.08e-15 80.9
Msa0011740 MtrunA17_Chr3g0123341 24.612 516 340 8 944 1413 18 530 1.35e-37 149
Msa0011740 MtrunA17_Chr3g0123341 26.275 255 155 5 361 585 18 269 1.56e-12 72.0
Msa0011740 MtrunA17_Chr7g0241881 26.569 478 321 10 959 1417 54 520 5.24e-36 144
Msa0011740 MtrunA17_Chr7g0241881 29.268 205 131 6 376 576 54 248 2.36e-13 74.7
Msa0011740 MtrunA17_Chr7g0272821 26.569 478 321 11 959 1417 54 520 1.68e-35 143
Msa0011740 MtrunA17_Chr7g0272821 29.268 205 131 7 376 576 54 248 5.02e-13 73.6
Msa0011740 MtrunA17_Chr3g0139481 23.969 509 285 7 954 1416 23 475 4.71e-33 135
Msa0011740 MtrunA17_Chr7g0214841 22.780 518 334 11 956 1415 18 527 1.64e-27 119
Msa0011740 MtrunA17_Chr8g0392171 24.585 301 168 7 1102 1375 3 271 4.24e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011740 AT3G03960.1 76.966 534 79 3 932 1421 1 534 0.0 841
Msa0011740 AT3G03960.1 75.281 267 36 2 349 585 1 267 7.38e-127 405
Msa0011740 AT3G18190.1 25.394 508 324 7 960 1416 33 536 4.80e-48 181
Msa0011740 AT3G18190.1 26.230 244 144 5 377 588 33 272 1.93e-15 81.6
Msa0011740 AT3G20050.1 27.660 517 307 11 959 1413 23 534 7.84e-48 181
Msa0011740 AT3G20050.1 28.507 221 122 5 376 563 23 240 9.66e-15 79.7
Msa0011740 AT5G26360.1 26.186 527 314 14 960 1423 24 538 4.93e-46 176
Msa0011740 AT5G26360.1 29.817 218 103 7 377 554 24 231 1.08e-17 89.0
Msa0011740 AT3G11830.1 25.568 528 325 14 942 1413 11 526 7.42e-44 169
Msa0011740 AT3G11830.1 28.182 220 115 7 359 545 11 220 2.61e-14 78.2
Msa0011740 AT3G11830.2 25.856 526 324 15 942 1413 11 524 1.10e-42 166
Msa0011740 AT3G11830.2 28.182 220 115 7 359 545 11 220 2.83e-14 78.2
Msa0011740 AT1G24510.1 24.621 528 344 10 934 1413 9 530 9.46e-38 150
Msa0011740 AT1G24510.1 25.094 267 162 7 351 585 9 269 7.83e-11 67.0
Msa0011740 AT1G24510.2 24.615 455 322 6 978 1413 2 454 3.57e-37 147
Msa0011740 AT1G24510.3 24.615 455 322 6 978 1413 25 477 4.82e-37 147
Msa0011740 AT5G20890.1 25.602 457 317 8 978 1417 70 520 7.56e-34 138
Msa0011740 AT5G20890.1 28.804 184 124 4 395 576 70 248 7.97e-13 73.6
Msa0011740 AT3G02530.1 25.160 469 310 11 979 1415 68 527 4.22e-31 130
Msa0011740 AT5G16070.1 24.625 467 314 10 979 1415 68 526 7.62e-30 126
Msa0011740 AT4G08640.1 34.969 163 77 3 1099 1260 1 135 1.01e-20 91.3

Find 383 sgRNAs with CRISPR-Local

Find 1759 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCCTGCTGCTAAGATTT+TGG 0.169868 1_1:+17682496 Msa0011740:CDS
ACATCCTGCTGCTAAGATTT+TGG 0.169868 1_1:+17693024 Msa0011740:CDS
GTCTTACTCTTACCCTATTT+TGG 0.176823 1_1:-17687561 None:intergenic
ATTTGAGTCATACCCTATTT+TGG 0.182730 1_1:-17677070 None:intergenic
AGCTGCATGTCTCAAATTAT+TGG 0.208256 1_1:+17679682 Msa0011740:intron
AGCTGCATGTCTCAAATTAT+TGG 0.208256 1_1:+17690211 Msa0011740:intron
TTATTTCTTCTAAGTGAAAA+TGG 0.212698 1_1:-17679747 None:intergenic
TTATTTCTTCTAAGTGAAAA+TGG 0.212698 1_1:-17690276 None:intergenic
AATTCATGCTTGTAGGCTTA+TGG 0.256079 1_1:+17697329 Msa0011740:intron
GCATTCTCCGCCAATGTTCT+AGG 0.257968 1_1:-17698910 None:intergenic
AACCTCCTCAGCTGCTGATT+TGG 0.259489 1_1:-17688565 None:intergenic
TACAGCCTGTTCACCAAAAT+AGG 0.266802 1_1:+17677057 Msa0011740:CDS
TACAGCCTGTTCACCAAAAT+AGG 0.266802 1_1:+17687548 Msa0011740:CDS
GAGCATGTGCACAAGGAATT+TGG 0.267869 1_1:-17688503 None:intergenic
AAAATGGTGGGTTTACCTTA+TGG 0.271750 1_1:+17681540 Msa0011740:CDS
AAAATGGTGGGTTTACCTTA+TGG 0.271750 1_1:+17692068 Msa0011740:CDS
ATTTCAGACTATGGAAATAT+TGG 0.272556 1_1:+17683539 Msa0011740:intron
ATTTCAGACTATGGAAATAT+TGG 0.272556 1_1:+17694068 Msa0011740:intron
TTTCTTTACATTACTTTGAT+AGG 0.275262 1_1:-17675303 None:intergenic
GTGAGAACTGACTCTTGTTT+TGG 0.288454 1_1:+17700719 Msa0011740:three_prime_UTR
CACTAAAGTTGGCATTGATT+TGG 0.293356 1_1:+17698990 Msa0011740:CDS
TTGTCCACATTAAAGTTTAC+AGG 0.307478 1_1:-17683813 None:intergenic
TTGTCCACATTAAAGTTTAC+AGG 0.307478 1_1:-17694342 None:intergenic
TCAAATTATTGGGAAGCTAT+TGG 0.309504 1_1:+17679693 Msa0011740:CDS
TCAAATTATTGGGAAGCTAT+TGG 0.309504 1_1:+17690222 Msa0011740:CDS
ACAGCTCTAATTAAAGAATC+AGG 0.311078 1_1:-17677683 None:intergenic
GTCCCCTCCACAAGCATCTC+TGG 0.314242 1_1:-17689312 None:intergenic
ACCTCCTCAGCTGCTGATTT+GGG 0.315099 1_1:-17688564 None:intergenic
GCGTAATAGTACAGTTGTTC+GGG 0.323609 1_1:+17683869 Msa0011740:CDS
GCGTAATAGTACAGTTGTTC+GGG 0.323609 1_1:+17694398 Msa0011740:CDS
CTTCACTTCACAATCTCTTA+AGG 0.325433 1_1:+17675417 Msa0011740:CDS
ATGGTGCTGAAGAGCTTATT+AGG 0.332856 1_1:+17682597 Msa0011740:CDS
ATGGTGCTGAAGAGCTTATT+AGG 0.332856 1_1:+17693125 Msa0011740:CDS
CTACACTTGGCATCTTGGCC+TGG 0.333545 1_1:+17700771 Msa0011740:three_prime_UTR
GAAGAGAGAGCACGAGCAAC+AGG 0.339408 1_1:-17686579 None:intergenic
TTTGCCGGCGAGTTACTTCA+TGG 0.340967 1_1:+17682578 Msa0011740:CDS
TTTGCCGGCGAGTTACTTCA+TGG 0.340967 1_1:+17693106 Msa0011740:CDS
ACTTCGGATTCGACAGTTAC+AGG 0.347011 1_1:+17687747 Msa0011740:CDS
TTGTTGTGGTTGTTGAAGAA+TGG 0.349548 1_1:-17675376 None:intergenic
GCCGCTATTGGTGGGTTTGC+TGG 0.357775 1_1:+17675574 Msa0011740:CDS
GCCGCTATTGGTGGGTTTGC+TGG 0.357775 1_1:+17686546 Msa0011740:CDS
AGAGATAGGCTCAGGGGAAT+TGG 0.360742 1_1:-17688537 None:intergenic
TGAGGAAGGTTCCGACAATA+TGG 0.361565 1_1:+17683572 Msa0011740:CDS
TGAGGAAGGTTCCGACAATA+TGG 0.361565 1_1:+17694101 Msa0011740:CDS
TGATAGTCCTTACATTGATA+TGG 0.363858 1_1:-17701042 None:intergenic
GTTCGTGTCGCAAAGCTCTT+AGG 0.365160 1_1:+17683837 Msa0011740:CDS
GTTCGTGTCGCAAAGCTCTT+AGG 0.365160 1_1:+17694366 Msa0011740:CDS
TCTGTTTCAGTTGAGGAAAT+TGG 0.367632 1_1:+17697543 Msa0011740:CDS
GAAGAGAGAGCACGAGCAAC+AGG 0.369231 1_1:-17675607 None:intergenic
TCAACATATCCAAGATCATC+TGG 0.376981 1_1:-17697519 None:intergenic
GTAATGTAAAGAAAAGAAAA+TGG 0.379093 1_1:+17675312 Msa0011740:exon
TCCTACTACACTTGGCATCT+TGG 0.380156 1_1:+17700766 Msa0011740:three_prime_UTR
AAAGCTCAACAAGAGGAAAT+TGG 0.382605 1_1:+17682530 Msa0011740:CDS
AAAGCTCAACAAGAGGAAAT+TGG 0.382605 1_1:+17693058 Msa0011740:CDS
GACCTTCTTTGAGCATAGAT+TGG 0.383461 1_1:-17681566 None:intergenic
GACCTTCTTTGAGCATAGAT+TGG 0.383461 1_1:-17692094 None:intergenic
CAGTAAAGCTCCACAATACT+TGG 0.386440 1_1:+17678687 Msa0011740:CDS
GTAGCAACTGTTGTCTTAAG+AGG 0.386858 1_1:+17697735 Msa0011740:CDS
CTGATTTGGGACTTAGAGAT+AGG 0.387375 1_1:-17688551 None:intergenic
CAGTAAAGCTCCACAATACT+TGG 0.387558 1_1:+17689223 Msa0011740:CDS
TTAACGCAGCAATGCTATAT+TGG 0.388018 1_1:+17676967 Msa0011740:CDS
TTAACGCAGCAATGCTATAT+TGG 0.388018 1_1:+17687458 Msa0011740:CDS
TGCGTAATAGTACAGTTGTT+CGG 0.388090 1_1:+17683868 Msa0011740:CDS
TGCGTAATAGTACAGTTGTT+CGG 0.388090 1_1:+17694397 Msa0011740:CDS
ATCAAGGCTGTAGTTGATTC+TGG 0.389293 1_1:+17697098 Msa0011740:CDS
ACATCATCAGTATCATCATC+TGG 0.389499 1_1:-17677761 None:intergenic
ACATCATCAGTATCATCATC+TGG 0.389499 1_1:-17688263 None:intergenic
GTAGAGAAAGAAGGGGTTAT+CGG 0.392310 1_1:-17675352 None:intergenic
GTCCCCTCCACAAGCATCCC+TGG 0.394937 1_1:-17678776 None:intergenic
ATGTCACAACCACACATGTT+TGG 0.396159 1_1:+17699031 Msa0011740:CDS
GGAACTCCTTCACCACTAGA+TGG 0.396450 1_1:-17688482 None:intergenic
AGAACATTGGCGGAGAATGC+TGG 0.398518 1_1:+17698913 Msa0011740:CDS
AATGGAAAAGGGTTGCATAT+TGG 0.400790 1_1:+17678726 Msa0011740:CDS
AATGGAAAAGGGTTGCATAT+TGG 0.400790 1_1:+17689262 Msa0011740:CDS
TCTCATACATTCTGCTGAAC+AGG 0.403846 1_1:+17685006 Msa0011740:CDS
TCTCATACATTCTGCTGAAC+AGG 0.403846 1_1:+17695535 Msa0011740:CDS
ACAGCTCTAAGTAAAGAATC+AGG 0.405933 1_1:-17688185 None:intergenic
CCTAATGCATTATATGTTGA+AGG 0.407076 1_1:+17676996 Msa0011740:CDS
TGTCACAACCACACATGTTT+GGG 0.407686 1_1:+17699032 Msa0011740:CDS
GCAGGTTGCTCTCTCTTGCC+AGG 0.408481 1_1:-17700673 None:intergenic
TGTTGTGGTTGTTGAAGAAT+GGG 0.412053 1_1:-17675375 None:intergenic
GGAACTCCTTCACCACTAGA+TGG 0.413837 1_1:-17677980 None:intergenic
AAGTGGATTGATCCTAAAAC+TGG 0.414539 1_1:+17688137 Msa0011740:CDS
TCAGATTATTATGGCGAAAC+CGG 0.414996 1_1:+17700642 Msa0011740:intron
ATGATAGTGCCGACTGGAAC+TGG 0.418053 1_1:+17675550 Msa0011740:CDS
ATGATAGTGCCGACTGGAAC+TGG 0.418053 1_1:+17686522 Msa0011740:CDS
CCTAAAACTGGCAAATCTAC+AGG 0.418414 1_1:+17677647 Msa0011740:CDS
CCTAAAACTGGCAAATCTAC+AGG 0.418414 1_1:+17688149 Msa0011740:CDS
ACTGGAACTGGAGCCGCTAT+TGG 0.423707 1_1:+17675562 Msa0011740:CDS
ACTGGAACTGGAGCCGCTAT+TGG 0.423707 1_1:+17686534 Msa0011740:CDS
CGACCAAACCCAGATGATCT+TGG 0.424847 1_1:+17697510 Msa0011740:CDS
CTGTGCAGACCTTAGTGAAT+AGG 0.425303 1_1:+17677702 Msa0011740:CDS
CTGTGCAGACCTTAGTGAAT+AGG 0.425303 1_1:+17688204 Msa0011740:CDS
GCACTCTGAATCAATGGAAA+AGG 0.426223 1_1:+17678714 Msa0011740:CDS
GCACTCTGAATCAATGGAAA+AGG 0.426223 1_1:+17689250 Msa0011740:CDS
GAAATAAAATTCGTAACATT+GGG 0.428084 1_1:+17679763 Msa0011740:CDS
GAAATAAAATTCGTAACATT+GGG 0.428084 1_1:+17690292 Msa0011740:CDS
CTCCTCCGCTTACAATCACT+TGG 0.429888 1_1:-17697124 None:intergenic
GGGCATGTGCACAAGGAATT+CGG 0.431905 1_1:-17678001 None:intergenic
AAGTGGGTTGATCCTAAAAC+TGG 0.431933 1_1:+17677635 Msa0011740:CDS
GCTGCATGTCTCAAATTATT+GGG 0.436132 1_1:+17679683 Msa0011740:intron
GCTGCATGTCTCAAATTATT+GGG 0.436132 1_1:+17690212 Msa0011740:intron
TTTCTGCCATGTGTGCTAGC+TGG 0.436569 1_1:+17689197 Msa0011740:CDS
AGGGATGCTTGTGGAGGGGA+CGG 0.437088 1_1:+17678778 Msa0011740:CDS
AGAAATAAAATTCGTAACAT+TGG 0.437314 1_1:+17679762 Msa0011740:CDS
AGAAATAAAATTCGTAACAT+TGG 0.437314 1_1:+17690291 Msa0011740:CDS
TGAGATGATTCCTAGAACAT+TGG 0.438030 1_1:+17698900 Msa0011740:CDS
AGGGGAATTGGAGTCATTGC+AGG 0.438316 1_1:-17688525 None:intergenic
AGCATAGATTGGATTCCATA+AGG 0.439577 1_1:-17681555 None:intergenic
AGCATAGATTGGATTCCATA+AGG 0.439577 1_1:-17692083 None:intergenic
ATTTCAGTTGCTGCAGCTCC+AGG 0.441650 1_1:-17698046 None:intergenic
TATTTCTCTTTCTAGAATGT+TGG 0.442482 1_1:+17700885 Msa0011740:three_prime_UTR
ACATATAATGCGTTAGGCAT+TGG 0.445829 1_1:-17687481 None:intergenic
GCGAAACCGGCTGGAGGACC+TGG 0.446059 1_1:+17700655 Msa0011740:CDS
TTTGGACGAGGGTGTTTGTA+AGG 0.446924 1_1:+17699008 Msa0011740:CDS
ATTATTATGGCGAAACCGGC+TGG 0.448121 1_1:+17700646 Msa0011740:CDS
TACACTTGGCATCTTGGCCT+GGG 0.453800 1_1:+17700772 Msa0011740:three_prime_UTR
GAGGGAAGTGCGGGTGATAG+TGG 0.458670 1_1:-17681652 None:intergenic
GAGGGAAGTGCGGGTGATAG+TGG 0.458670 1_1:-17692180 None:intergenic
CTCTTGCCAGGTCCTCCAGC+CGG 0.458903 1_1:-17700661 None:intergenic
CCTAACGCATTATATGTTGA+AGG 0.459889 1_1:+17687487 Msa0011740:CDS
CTGATGATGTTGATGAATAT+CGG 0.460169 1_1:+17677774 Msa0011740:CDS
CTGATGATGTTGATGAATAT+CGG 0.460169 1_1:+17688276 Msa0011740:CDS
ACAAACCTTAGCAATGGCTT+TGG 0.461437 1_1:-17682657 None:intergenic
ACAAACCTTAGCAATGGCTT+TGG 0.461437 1_1:-17693185 None:intergenic
ATGCTGCATGCACTGTACTA+CGG 0.464405 1_1:+17699368 Msa0011740:CDS
GTGACAGTATATTCTGCAAC+AGG 0.465895 1_1:-17687802 None:intergenic
TGGGACTTAGAGATAGGCTC+AGG 0.467247 1_1:-17688545 None:intergenic
ACAGATTTGCAGAAGGGTCA+TGG 0.468323 1_1:+17677030 Msa0011740:CDS
TTCCCAGGGATGCTTGTGGA+GGG 0.471362 1_1:+17678773 Msa0011740:CDS
GTGACAGTATATTCTACAAC+AGG 0.472274 1_1:-17677305 None:intergenic
TATCCAAGATCATCTGGGTT+TGG 0.472971 1_1:-17697513 None:intergenic
GGGATGCTTGTGGAGGGGAC+GGG 0.474394 1_1:+17678779 Msa0011740:CDS
GTAATAGCTGCTCACAAAGC+AGG 0.476166 1_1:+17679717 Msa0011740:CDS
GTAATAGCTGCTCACAAAGC+AGG 0.476166 1_1:+17690246 Msa0011740:CDS
GTGAATGCCATCGCTGTTGT+TGG 0.477098 1_1:+17677731 Msa0011740:CDS
GTGAATGCCATCGCTGTTGT+TGG 0.477098 1_1:+17688233 Msa0011740:CDS
ACAGCCTGTTCACCAAAATA+GGG 0.477932 1_1:+17677058 Msa0011740:CDS
CACTGTACTACGGGTGGACC+AGG 0.478361 1_1:+17699378 Msa0011740:CDS
TGGATTCTGTAGTCCTTCCC+AGG 0.478829 1_1:+17678758 Msa0011740:CDS
GCTATCTCCATATCAATGTA+AGG 0.480445 1_1:+17701035 Msa0011740:three_prime_UTR
AGAATGGGGTAGAGAAAGAA+GGG 0.480882 1_1:-17675360 None:intergenic
GGCGATGCACTCTGAATCAA+TGG 0.484155 1_1:+17689244 Msa0011740:CDS
CCTTCAACATATAATGCATT+AGG 0.484777 1_1:-17676996 None:intergenic
ACAGCCTGTTCACCAAAATA+GGG 0.486267 1_1:+17687549 Msa0011740:CDS
GTATTTGAGTGACCATTGGC+AGG 0.490682 1_1:-17679801 None:intergenic
GTATTTGAGTGACCATTGGC+AGG 0.490682 1_1:-17690330 None:intergenic
AGTTCTTGATGCTGGTATAG+AGG 0.490977 1_1:+17677223 Msa0011740:CDS
AGTTCTTGATGCTGGTATAG+AGG 0.490977 1_1:+17687720 Msa0011740:CDS
TAGGGTTACCATTGGGACCG+AGG 0.491115 1_1:-17681671 None:intergenic
TAGGGTTACCATTGGGACCG+AGG 0.491115 1_1:-17692199 None:intergenic
ACAGATTCGCAGAAGGGTCA+TGG 0.492238 1_1:+17687521 Msa0011740:CDS
TAGTACAGTTGTTCGGGGAA+TGG 0.492637 1_1:+17683875 Msa0011740:CDS
TAGTACAGTTGTTCGGGGAA+TGG 0.492637 1_1:+17694404 Msa0011740:CDS
GAGGGAAGCCCTTGCAGCAT+CGG 0.495642 1_1:-17677276 None:intergenic
GAGGGAAGCCCTTGCAGCAT+CGG 0.495642 1_1:-17687773 None:intergenic
GAGTTATGACACTACATGTC+TGG 0.496943 1_1:-17700998 None:intergenic
TGCTGCATGCACTGTACTAC+GGG 0.498675 1_1:+17699369 Msa0011740:CDS
AGAGATGCTTGTGGAGGGGA+CGG 0.498850 1_1:+17689314 Msa0011740:CDS
GAAGGTCACAAACATCTCTC+TGG 0.498990 1_1:+17681582 Msa0011740:CDS
GAAGGTCACAAACATCTCTC+TGG 0.498990 1_1:+17692110 Msa0011740:CDS
ACATATAATGCATTAGGCAT+TGG 0.499376 1_1:-17676990 None:intergenic
GGAACTGGAGCCGCTATTGG+TGG 0.500113 1_1:+17675565 Msa0011740:CDS
GGAACTGGAGCCGCTATTGG+TGG 0.500113 1_1:+17686537 Msa0011740:CDS
ATTGTAAGCGGAGGAGCAGT+AGG 0.500138 1_1:+17697131 Msa0011740:CDS
CACTCTGAATCAATGGAAAA+GGG 0.500456 1_1:+17678715 Msa0011740:CDS
CACTCTGAATCAATGGAAAA+GGG 0.500456 1_1:+17689251 Msa0011740:CDS
GAGAGAGCAACCTGCTGGCA+TGG 0.500525 1_1:+17700681 Msa0011740:CDS
GGTGATGCACTCTGAATCAA+TGG 0.500894 1_1:+17678708 Msa0011740:CDS
TTCCCAGAGATGCTTGTGGA+GGG 0.501167 1_1:+17689309 Msa0011740:CDS
AAGAATGGGGTAGAGAAAGA+AGG 0.502658 1_1:-17675361 None:intergenic
TGATGAATATCGGCAGGGAT+TGG 0.504212 1_1:+17677784 Msa0011740:CDS
TGATGAATATCGGCAGGGAT+TGG 0.504212 1_1:+17688286 Msa0011740:CDS
GTTGGAATAGTTCTTGATGC+TGG 0.507045 1_1:+17677215 Msa0011740:CDS
GTTGGAATAGTTCTTGATGC+TGG 0.507045 1_1:+17687712 Msa0011740:CDS
TGCGGGTGATAGTGGAGAGT+TGG 0.507249 1_1:-17681644 None:intergenic
TGCGGGTGATAGTGGAGAGT+TGG 0.507249 1_1:-17692172 None:intergenic
GAGATGCTTGTGGAGGGGAC+GGG 0.507797 1_1:+17689315 Msa0011740:CDS
TTACATTAGGGTGAGTGATA+AGG 0.508155 1_1:-17675642 None:intergenic
TTACATTAGGGTGAGTGATA+AGG 0.508155 1_1:-17686614 None:intergenic
TGCTGAAGAGCTTATTAGGA+TGG 0.509633 1_1:+17682601 Msa0011740:CDS
TGCTGAAGAGCTTATTAGGA+TGG 0.509633 1_1:+17693129 Msa0011740:CDS
CTTCCCAGGGATGCTTGTGG+AGG 0.509870 1_1:+17678772 Msa0011740:CDS
TAGTATAAAGAGAATGGAAA+AGG 0.510329 1_1:+17683920 Msa0011740:CDS
TAGTATAAAGAGAATGGAAA+AGG 0.510329 1_1:+17694449 Msa0011740:CDS
ACTATCACCCGCACTTCCCT+CGG 0.511536 1_1:+17681654 Msa0011740:CDS
ACTATCACCCGCACTTCCCT+CGG 0.511536 1_1:+17692182 Msa0011740:CDS
GAAGGACGGTACTGAACATA+AGG 0.513097 1_1:+17675265 Msa0011740:five_prime_UTR
GCATCAGGAAACACTAAAGT+TGG 0.518443 1_1:+17698979 Msa0011740:CDS
GAACATTGGCGGAGAATGCT+GGG 0.519436 1_1:+17698914 Msa0011740:CDS
GCTGTTGCTAGCAAGCAATT+CGG 0.521387 1_1:+17683636 Msa0011740:CDS
GCTGTTGCTAGCAAGCAATT+CGG 0.521387 1_1:+17694165 Msa0011740:CDS
TACGACTGGTTCTGTAGCTA+TGG 0.521985 1_1:+17697395 Msa0011740:CDS
TAGTCTTCGTCCATGCCAGC+AGG 0.523539 1_1:-17700691 None:intergenic
CAGATTTGCAGAAGGGTCAT+GGG 0.525771 1_1:+17677031 Msa0011740:CDS
GGCAAGAGAGAGCAACCTGC+TGG 0.526440 1_1:+17700676 Msa0011740:CDS
TACAAGTAGCCGATGCTGCA+AGG 0.528199 1_1:+17677267 Msa0011740:CDS
TACAGGTAGCCGATGCTGCA+AGG 0.528199 1_1:+17687764 Msa0011740:CDS
CGGAGGAGCAGTAGGAGAGA+TGG 0.529826 1_1:+17697139 Msa0011740:CDS
ATCCAATCTATGCTCAAAGA+AGG 0.531352 1_1:+17681564 Msa0011740:CDS
ATCCAATCTATGCTCAAAGA+AGG 0.531352 1_1:+17692092 Msa0011740:CDS
TCCCCTCCACAAGCATCTCT+GGG 0.532343 1_1:-17689311 None:intergenic
CTTAAGAGATTGTGAAGTGA+AGG 0.532483 1_1:-17675416 None:intergenic
GCTGAAGAGCTTATTAGGAT+GGG 0.532631 1_1:+17682602 Msa0011740:CDS
GCTGAAGAGCTTATTAGGAT+GGG 0.532631 1_1:+17693130 Msa0011740:CDS
ATTGGGACCGAGGGAAGTGC+GGG 0.532962 1_1:-17681661 None:intergenic
ATTGGGACCGAGGGAAGTGC+GGG 0.532962 1_1:-17692189 None:intergenic
TGTTGATTCTGTTTCAGTTG+AGG 0.534399 1_1:+17697536 Msa0011740:CDS
CTCTACGCAGAACATGCATC+AGG 0.534639 1_1:+17698964 Msa0011740:CDS
GTCACGGACATCCATATTGT+CGG 0.535283 1_1:-17683583 None:intergenic
GTCACGGACATCCATATTGT+CGG 0.535283 1_1:-17694112 None:intergenic
GATGCTGCAAGGGCTTCCCT+CGG 0.535323 1_1:+17677278 Msa0011740:CDS
GATGCTGCAAGGGCTTCCCT+CGG 0.535323 1_1:+17687775 Msa0011740:CDS
AAAACCAAAATCTTAGCAGC+AGG 0.535365 1_1:-17682500 None:intergenic
AAAACCAAAATCTTAGCAGC+AGG 0.535365 1_1:-17693028 None:intergenic
ACATCTGCAACTGAAACTAA+AGG 0.536029 1_1:+17684977 Msa0011740:CDS
ACATCTGCAACTGAAACTAA+AGG 0.536029 1_1:+17695506 Msa0011740:CDS
TCCCAGGGATGCTTGTGGAG+GGG 0.536283 1_1:+17678774 Msa0011740:CDS
GAGTGCATCGCCAAGTATTG+TGG 0.536305 1_1:-17689233 None:intergenic
TTGAGGAAATTGGTGGTGCA+AGG 0.536879 1_1:+17697553 Msa0011740:CDS
ATATCCACTGATAATCTCAC+TGG 0.537469 1_1:-17682633 None:intergenic
ATATCCACTGATAATCTCAC+TGG 0.537469 1_1:-17693161 None:intergenic
CTCTTGACAGATTCGCAGAA+GGG 0.537698 1_1:+17687515 Msa0011740:CDS
AGGGATAGCCGTATTGTGCC+TGG 0.537772 1_1:+17698028 Msa0011740:CDS
GATGATTCCTAGAACATTGG+CGG 0.537916 1_1:+17698903 Msa0011740:CDS
CTATTTATCAGACTATGTGC+AGG 0.538247 1_1:+17698008 Msa0011740:intron
GTCCTTCCCAGGGATGCTTG+TGG 0.540707 1_1:+17678769 Msa0011740:CDS
GCCAAGATGCCAAGTGTAGT+AGG 0.541769 1_1:-17700767 None:intergenic
CTGAGGCCAGCTAGCACACA+TGG 0.542293 1_1:-17689203 None:intergenic
TCCCCTCCACAAGCATCCCT+GGG 0.542524 1_1:-17678775 None:intergenic
CTCTTGACAGATTTGCAGAA+GGG 0.543219 1_1:+17677024 Msa0011740:CDS
TAAAAGAAAACTAGATGCCC+AGG 0.545426 1_1:-17700789 None:intergenic
TGTTGGTAGTATAAAGAGAA+TGG 0.546633 1_1:+17683914 Msa0011740:CDS
TGTTGGTAGTATAAAGAGAA+TGG 0.546633 1_1:+17694443 Msa0011740:CDS
CGCACTTCCCTCGGTCCCAA+TGG 0.547576 1_1:+17681663 Msa0011740:CDS
CGCACTTCCCTCGGTCCCAA+TGG 0.547576 1_1:+17692191 Msa0011740:CDS
CTGGTATAGAGGAAGAGCTT+CGG 0.548267 1_1:+17677234 Msa0011740:CDS
GTTTCAGTTGAGGAAATTGG+TGG 0.550129 1_1:+17697546 Msa0011740:CDS
AATATTGGACGAACTTGTTG+AGG 0.552189 1_1:+17683554 Msa0011740:CDS
AATATTGGACGAACTTGTTG+AGG 0.552189 1_1:+17694083 Msa0011740:CDS
AGACCTACTGGCGGGAGTTG+AGG 0.554528 1_1:+17677947 Msa0011740:CDS
ATTGAAAGAGCAGTTGATGA+TGG 0.555713 1_1:+17697783 Msa0011740:CDS
CAGATTCGCAGAAGGGTCAT+GGG 0.559831 1_1:+17687522 Msa0011740:CDS
AGACCTACTGGCGGGAGTTG+AGG 0.561159 1_1:+17688449 Msa0011740:CDS
ATGAAACGGTTGGTTTGTTG+TGG 0.564750 1_1:-17675390 None:intergenic
TATAAGCCATCTAGTGGTGA+AGG 0.565951 1_1:+17688476 Msa0011740:CDS
CATCATCAGTATCATCATCT+GGG 0.566233 1_1:-17677760 None:intergenic
CATCATCAGTATCATCATCT+GGG 0.566233 1_1:-17688262 None:intergenic
ACAAGTAGCCGATGCTGCAA+GGG 0.568105 1_1:+17677268 Msa0011740:CDS
ACAGGTAGCCGATGCTGCAA+GGG 0.568105 1_1:+17687765 Msa0011740:CDS
TTGGACGAACTTGTTGAGGA+AGG 0.568925 1_1:+17683558 Msa0011740:CDS
TTGGACGAACTTGTTGAGGA+AGG 0.568925 1_1:+17694087 Msa0011740:CDS
GAGTGCATCACCAAGTATTG+TGG 0.569897 1_1:-17678697 None:intergenic
CTGCAGCTCCAGGCACAATA+CGG 0.572095 1_1:-17698036 None:intergenic
CTCCACAAGCATCCCTGGGA+AGG 0.572336 1_1:-17678771 None:intergenic
CTCCACAAGCATCTCTGGGA+AGG 0.572336 1_1:-17689307 None:intergenic
TCCCAGAGATGCTTGTGGAG+GGG 0.572760 1_1:+17689310 Msa0011740:CDS
GAACTGGAGCCGCTATTGGT+GGG 0.573340 1_1:+17675566 Msa0011740:CDS
GAACTGGAGCCGCTATTGGT+GGG 0.573340 1_1:+17686538 Msa0011740:CDS
CCTTCAACATATAATGCGTT+AGG 0.573409 1_1:-17687487 None:intergenic
TCCCAAATCAGCAGCTGAGG+AGG 0.573681 1_1:+17688563 Msa0011740:CDS
GTCGCAAAGCTCTTAGGAGG+AGG 0.576535 1_1:+17683843 Msa0011740:CDS
GTCGCAAAGCTCTTAGGAGG+AGG 0.576535 1_1:+17694372 Msa0011740:CDS
TATAAGCCATCTAGTGGTGA+AGG 0.577042 1_1:+17677974 Msa0011740:CDS
ACTTCATTTATGCCTGCCAA+TGG 0.577218 1_1:+17679789 Msa0011740:CDS
ACTTCATTTATGCCTGCCAA+TGG 0.577218 1_1:+17690318 Msa0011740:CDS
CAGCTCTAATTAAAGAATCA+GGG 0.578118 1_1:-17677682 None:intergenic
GTCCTTCCCAGAGATGCTTG+TGG 0.578365 1_1:+17689305 Msa0011740:CDS
AAAGAGAATGGAAAAGGCAA+AGG 0.578368 1_1:+17683926 Msa0011740:CDS
AAAGAGAATGGAAAAGGCAA+AGG 0.578368 1_1:+17694455 Msa0011740:CDS
GTGAAGGAACATGAAACGGT+TGG 0.578934 1_1:-17675400 None:intergenic
GAATGCTGGGCTAAATGCAA+TGG 0.579804 1_1:+17698927 Msa0011740:CDS
GCTCTTGACAGATTCGCAGA+AGG 0.580243 1_1:+17687514 Msa0011740:CDS
TAGGTGGCTGTGTTTGCTGG+TGG 0.581109 1_1:+17684947 Msa0011740:intron
TAGGTGGCTGTGTTTGCTGG+TGG 0.581109 1_1:+17695476 Msa0011740:intron
AAACCCTGTAAACTTTAATG+TGG 0.581302 1_1:+17683809 Msa0011740:CDS
AAACCCTGTAAACTTTAATG+TGG 0.581302 1_1:+17694338 Msa0011740:CDS
CTAAAACTGGCAAATCTACA+GGG 0.581494 1_1:+17677648 Msa0011740:CDS
CTAAAACTGGCAAATCTACA+GGG 0.581494 1_1:+17688150 Msa0011740:CDS
AGTTGGCATTGATTTGGACG+AGG 0.582981 1_1:+17698996 Msa0011740:CDS
AAGATACTTGATACCTCAAG+TGG 0.584669 1_1:-17677335 None:intergenic
AAGATACTTGATACCTCAAG+TGG 0.584669 1_1:-17687832 None:intergenic
CATCCCAGTGAGATTATCAG+TGG 0.585054 1_1:+17682629 Msa0011740:CDS
CATCCCAGTGAGATTATCAG+TGG 0.585054 1_1:+17693157 Msa0011740:CDS
CATTGGGACCGAGGGAAGTG+CGG 0.586602 1_1:-17681662 None:intergenic
CATTGGGACCGAGGGAAGTG+CGG 0.586602 1_1:-17692190 None:intergenic
TGAGGAAATTGGTGGTGCAA+GGG 0.587609 1_1:+17697554 Msa0011740:CDS
GCTCTTGACAGATTTGCAGA+AGG 0.588709 1_1:+17677023 Msa0011740:CDS
ACATGATGTCCTACTACACT+TGG 0.589124 1_1:+17700758 Msa0011740:three_prime_UTR
TGATGTTGATGAATATCGGC+AGG 0.589319 1_1:+17677778 Msa0011740:CDS
TGATGTTGATGAATATCGGC+AGG 0.589319 1_1:+17688280 Msa0011740:CDS
AGGGTTACCATTGGGACCGA+GGG 0.590918 1_1:-17681670 None:intergenic
AGGGTTACCATTGGGACCGA+GGG 0.590918 1_1:-17692198 None:intergenic
CAACAAGAGGAAATTGGTGA+TGG 0.592907 1_1:+17682536 Msa0011740:CDS
CAACAAGAGGAAATTGGTGA+TGG 0.592907 1_1:+17693064 Msa0011740:CDS
AAATAACTTGCTCCTTGTCA+CGG 0.594985 1_1:-17683599 None:intergenic
AAATAACTTGCTCCTTGTCA+CGG 0.594985 1_1:-17694128 None:intergenic
TAAAGTAGAAGAGCTCATCA+AGG 0.595111 1_1:+17697082 Msa0011740:CDS
TGAAGTGAAGGAACATGAAA+CGG 0.595940 1_1:-17675404 None:intergenic
AACCTAACAAACCTTAGCAA+TGG 0.596276 1_1:-17682663 None:intergenic
AACCTAACAAACCTTAGCAA+TGG 0.596276 1_1:-17693191 None:intergenic
TTCTGCAACAGGCAATCCGA+GGG 0.597539 1_1:-17687791 None:intergenic
TGATGGAGTGAACACTTACA+AGG 0.597565 1_1:+17697800 Msa0011740:CDS
GGCTGGGAAAGCTCAACAAG+AGG 0.600488 1_1:+17682523 Msa0011740:CDS
GGCTGGGAAAGCTCAACAAG+AGG 0.600488 1_1:+17693051 Msa0011740:CDS
CAATATGGATGTCCGTGACA+AGG 0.600789 1_1:+17683587 Msa0011740:CDS
CAATATGGATGTCCGTGACA+AGG 0.600789 1_1:+17694116 Msa0011740:CDS
TAATAGCTGCTCACAAAGCA+GGG 0.602386 1_1:+17679718 Msa0011740:CDS
TAATAGCTGCTCACAAAGCA+GGG 0.602386 1_1:+17690247 Msa0011740:CDS
CAGCCTCAACTCCCGCCAGT+AGG 0.603348 1_1:-17677950 None:intergenic
CTGCCTCAACTCCCGCCAGT+AGG 0.603348 1_1:-17688452 None:intergenic
GGATTCTGTAGTCCTTCCCA+GGG 0.604243 1_1:+17678759 Msa0011740:CDS
TGTCACAGACACTCCACTTG+AGG 0.604509 1_1:+17677322 Msa0011740:CDS
TGTCACAGACACTCCACTTG+AGG 0.604509 1_1:+17687819 Msa0011740:CDS
TAGCTACAGAACCAGTCGTA+CGG 0.607987 1_1:-17697392 None:intergenic
TGCAGCTTCAAGCTTTACGG+TGG 0.609231 1_1:-17681517 None:intergenic
TGCAGCTTCAAGCTTTACGG+TGG 0.609231 1_1:-17692045 None:intergenic
TTGCATATTGGCAAGTGATG+TGG 0.609804 1_1:+17678738 Msa0011740:CDS
TTGCATATTGGCAAGTGATG+TGG 0.609804 1_1:+17689274 Msa0011740:CDS
GTTGGCATTGATTTGGACGA+GGG 0.610122 1_1:+17698997 Msa0011740:CDS
AAATTATTCGAAAACTGAAG+AGG 0.610195 1_1:+17697058 Msa0011740:CDS
TTCTACAACAGGCAATCCGA+GGG 0.610250 1_1:-17677294 None:intergenic
TCCTCCGCTTACAATCACTT+GGG 0.610330 1_1:-17697123 None:intergenic
TGTCCACATTAAAGTTTACA+GGG 0.611569 1_1:-17683812 None:intergenic
TGTCCACATTAAAGTTTACA+GGG 0.611569 1_1:-17694341 None:intergenic
CAACATATCCAAGATCATCT+GGG 0.611755 1_1:-17697518 None:intergenic
TATACAGGGAGTAGACCTAC+TGG 0.612219 1_1:+17677935 Msa0011740:intron
TATACAGGGAGTAGACCTAC+TGG 0.612219 1_1:+17688437 Msa0011740:intron
ATTGCAGGAGCATGTGCACA+AGG 0.613853 1_1:-17688510 None:intergenic
ATATACCAAAGCCATTGCTA+AGG 0.614733 1_1:+17682652 Msa0011740:CDS
ATATACCAAAGCCATTGCTA+AGG 0.614733 1_1:+17693180 Msa0011740:CDS
ACCAGCAAACCCACCAATAG+CGG 0.615654 1_1:-17675575 None:intergenic
ACCAGCAAACCCACCAATAG+CGG 0.615654 1_1:-17686547 None:intergenic
AAGTCCCAAATCAGCAGCTG+AGG 0.617522 1_1:+17688560 Msa0011740:CDS
CAGCTCTAAGTAAAGAATCA+GGG 0.622102 1_1:-17688184 None:intergenic
AGCACCATGAAGTAACTCGC+CGG 0.622286 1_1:-17682582 None:intergenic
AGCACCATGAAGTAACTCGC+CGG 0.622286 1_1:-17693110 None:intergenic
CGTGTCGCAAAGCTCTTAGG+AGG 0.623567 1_1:+17683840 Msa0011740:CDS
CGTGTCGCAAAGCTCTTAGG+AGG 0.623567 1_1:+17694369 Msa0011740:CDS
CTTCCCAGAGATGCTTGTGG+AGG 0.624017 1_1:+17689308 Msa0011740:CDS
GGGACTTAGAGATAGGCTCA+GGG 0.626621 1_1:-17688544 None:intergenic
ATTCTACAACAGGCAATCCG+AGG 0.628425 1_1:-17677295 None:intergenic
GGCTGTTATAAGCCATCTAG+TGG 0.629360 1_1:+17677968 Msa0011740:CDS
CTTTCATTACAGTACAGTGA+AGG 0.634161 1_1:+17675247 None:intergenic
ATTCTGCAACAGGCAATCCG+AGG 0.636076 1_1:-17687792 None:intergenic
CTGGTATAGAGGAAGAACTT+CGG 0.638188 1_1:+17687731 Msa0011740:CDS
TATCCACTGATAATCTCACT+GGG 0.639601 1_1:-17682632 None:intergenic
TATCCACTGATAATCTCACT+GGG 0.639601 1_1:-17693160 None:intergenic
GGCAGTTATAAGCCATCTAG+TGG 0.640169 1_1:+17688470 Msa0011740:CDS
AAGTAATTTACTTAGCCATG+TGG 0.643526 1_1:-17699059 None:intergenic
GTTGTGGTTGTTGAAGAATG+GGG 0.643585 1_1:-17675374 None:intergenic
TATTTATCAGACTATGTGCA+GGG 0.644306 1_1:+17698009 Msa0011740:intron
CATTACAGTACAGTGAAGGA+CGG 0.644382 1_1:+17675251 Msa0011740:five_prime_UTR
GCCCAAGTGATTGTAAGCGG+AGG 0.645935 1_1:+17697122 Msa0011740:CDS
ACATGTTTGGGATCTCCACA+TGG 0.646020 1_1:+17699044 Msa0011740:CDS
CAGGGAGTAGACCTACTGGC+GGG 0.651585 1_1:+17677939 Msa0011740:intron
CAGGGAGTAGACCTACTGGC+GGG 0.651585 1_1:+17688441 Msa0011740:intron
GAAACGTCCAACAACAGCGA+TGG 0.657732 1_1:-17677738 None:intergenic
GAAACGTCCAACAACAGCGA+TGG 0.657732 1_1:-17688240 None:intergenic
AGTATTGTGGAGCTTTACTG+AGG 0.660058 1_1:-17689220 None:intergenic
AGTATTGTGGAGCTTTACTG+AGG 0.661521 1_1:-17678684 None:intergenic
TATCGGAAGATTGAGAGTGA+AGG 0.663850 1_1:-17675335 None:intergenic
CGTAATAGTACAGTTGTTCG+GGG 0.666054 1_1:+17683870 Msa0011740:CDS
CGTAATAGTACAGTTGTTCG+GGG 0.666054 1_1:+17694399 Msa0011740:CDS
GGTGCCCAAGTGATTGTAAG+CGG 0.667648 1_1:+17697119 Msa0011740:CDS
ATAGCGGCTCCAGTTCCAGT+CGG 0.668116 1_1:-17675559 None:intergenic
ATAGCGGCTCCAGTTCCAGT+CGG 0.668116 1_1:-17686531 None:intergenic
GAATGGGGTAGAGAAAGAAG+GGG 0.674497 1_1:-17675359 None:intergenic
TGCATGCACTGTACTACGGG+TGG 0.676746 1_1:+17699372 Msa0011740:CDS
AGTGTGATGATAGTGCCGAC+TGG 0.677986 1_1:+17675544 Msa0011740:CDS
AGTGTGATGATAGTGCCGAC+TGG 0.677986 1_1:+17686516 Msa0011740:CDS
ATTATGGCGAAACCGGCTGG+AGG 0.695300 1_1:+17700649 Msa0011740:CDS
GATGTTGATGAATATCGGCA+GGG 0.699845 1_1:+17677779 Msa0011740:CDS
GATGTTGATGAATATCGGCA+GGG 0.699845 1_1:+17688281 Msa0011740:CDS
GTGGAGATCCCAAACATGTG+TGG 0.710523 1_1:-17699040 None:intergenic
ACAGGGAGTAGACCTACTGG+CGG 0.713149 1_1:+17677938 Msa0011740:intron
ACAGGGAGTAGACCTACTGG+CGG 0.713149 1_1:+17688440 Msa0011740:intron
GGACTTAGAGATAGGCTCAG+GGG 0.714029 1_1:-17688543 None:intergenic
GTTCTGAGAAATGATGCTGT+TGG 0.720603 1_1:+17683897 Msa0011740:CDS
GTTCTGAGAAATGATGCTGT+TGG 0.720603 1_1:+17694426 Msa0011740:CDS
AAACTGGCAAATCTACAGGG+AGG 0.740974 1_1:+17688153 Msa0011740:CDS
AAACTGGCAAATCTACAGGG+AGG 0.758367 1_1:+17677651 Msa0011740:CDS
CTATCATTTATCAAGCACAG+TGG 0.793494 1_1:+17701059 Msa0011740:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAAAAAATTAATAAA+AGG - chr1_1:17680105-17680124 None:intergenic 0.0%
!! TATAATATATAATATTAATA+TGG + chr1_1:17686714-17686733 Msa0011740:intron 0.0%
!! TAAATAAAAAAATTAATAAA+AGG - chr1_1:17680105-17680124 None:intergenic 0.0%
!! AAAAATAAATAAAATAAAAT+AGG - chr1_1:17699424-17699443 None:intergenic 0.0%
!!! TATTTTATTTTATTTATTTT+TGG + chr1_1:17699423-17699442 Msa0011740:intron 0.0%
!!! TATAATTTATTTTTTTTATT+TGG + chr1_1:17700934-17700953 Msa0011740:three_prime_UTR 0.0%
!!! ATAATTTATTTTTTTTATTT+GGG + chr1_1:17700935-17700954 Msa0011740:three_prime_UTR 0.0%
!!! AAAATACTATTAATTTGTTA+TGG + chr1_1:17675482-17675501 Msa0011740:intron 10.0%
!! ATAAAATTGAATATTGAAAT+TGG + chr1_1:17676507-17676526 Msa0011740:intron 10.0%
!!! TTTTTGTACATATATATAAA+GGG - chr1_1:17676564-17676583 None:intergenic 10.0%
!!! TTTTTTGTACATATATATAA+AGG - chr1_1:17676565-17676584 None:intergenic 10.0%
!!! TTTTGTATTATTCATTAATT+TGG + chr1_1:17677881-17677900 Msa0011740:intron 10.0%
!! ATTATAAAATGTTTATGAAA+AGG - chr1_1:17680680-17680699 None:intergenic 10.0%
!!! AATTAATTTGTTTTGTTATT+AGG + chr1_1:17682389-17682408 Msa0011740:intron 10.0%
!!! ATTAATTTGTTTTGTTATTA+GGG + chr1_1:17682390-17682409 Msa0011740:intron 10.0%
!! TAAAAATAAATGATAAATGA+AGG + chr1_1:17684182-17684201 Msa0011740:intron 10.0%
!! ATAAAATACTTAAAAATGAA+AGG + chr1_1:17687111-17687130 Msa0011740:intron 10.0%
!!! TTTTGTATTATTCATTAATT+TGG + chr1_1:17677881-17677900 Msa0011740:intron 10.0%
!!! ATATTTTCGTAAATTATTAT+TGG + chr1_1:17688755-17688774 Msa0011740:intron 10.0%
!!! AGTATATGATATATATTTTT+TGG + chr1_1:17690399-17690418 Msa0011740:intron 10.0%
!! ATTATAAAATGTTTATGAAA+AGG - chr1_1:17680680-17680699 None:intergenic 10.0%
!!! AATTAATTTGTTTTGTTATT+AGG + chr1_1:17682389-17682408 Msa0011740:intron 10.0%
!!! ATTAATTTGTTTTGTTATTA+GGG + chr1_1:17682390-17682409 Msa0011740:intron 10.0%
!! TAAAAATAAATGATAAATGA+AGG + chr1_1:17684182-17684201 Msa0011740:intron 10.0%
!!! GATTATTTTTCTTTAATTAT+TGG - chr1_1:17685767-17685786 None:intergenic 10.0%
!! AACAAAAATTAGAAAAAAAA+AGG - chr1_1:17697466-17697485 None:intergenic 10.0%
!! TTGTAAAAAAAAAAAAAAAC+TGG + chr1_1:17699540-17699559 Msa0011740:intron 10.0%
!!! ATTTTATTGATACAAATAAT+AGG - chr1_1:17700214-17700233 None:intergenic 10.0%
!! ATATTAACAAAAATAAGATA+TGG - chr1_1:17700572-17700591 None:intergenic 10.0%
!! AAAAAAATCAATGATTTGAT+TGG + chr1_1:17676581-17676600 Msa0011740:intron 15.0%
!! GATAAAATAGTTTAAATGAA+TGG + chr1_1:17676625-17676644 Msa0011740:intron 15.0%
!! ATTCTACAACAATATATAAA+GGG - chr1_1:17676690-17676709 None:intergenic 15.0%
!! AATTCTACAACAATATATAA+AGG - chr1_1:17676691-17676710 None:intergenic 15.0%
!!! CTATTTTCGTAAATTATTAT+TGG + chr1_1:17678257-17678276 Msa0011740:intron 15.0%
!! TTAAATTTCCATTCATTTAA+TGG - chr1_1:17678491-17678510 None:intergenic 15.0%
!! CAAAAAATAAGGTATATTAA+TGG + chr1_1:17678824-17678843 Msa0011740:intron 15.0%
!! CAAAATTAAAAAGAGATTAA+AGG - chr1_1:17679335-17679354 None:intergenic 15.0%
!!! TTCTATTTTAATTTAACTCA+AGG - chr1_1:17679579-17679598 None:intergenic 15.0%
!! ATTAAAATGAAACTCATTAT+TGG + chr1_1:17679637-17679656 Msa0011740:intron 15.0%
!!! GATTATAAAAAAAGCAATTT+TGG - chr1_1:17682149-17682168 None:intergenic 15.0%
!!! TAAATAGCTTCTTTTTAAAT+TGG + chr1_1:17682171-17682190 Msa0011740:intron 15.0%
!!! TCATAAAAGTATTCAATTAA+TGG + chr1_1:17683157-17683176 Msa0011740:intron 15.0%
!! TTAATGATTTATCATTAACT+GGG - chr1_1:17684165-17684184 None:intergenic 15.0%
!! TTTAATGATTTATCATTAAC+TGG - chr1_1:17684166-17684185 None:intergenic 15.0%
!!! ATTACTTTATTCTGTTTTAT+TGG + chr1_1:17685059-17685078 Msa0011740:intron 15.0%
!! TCATCTCATATTATAATAAT+GGG - chr1_1:17686872-17686891 None:intergenic 15.0%
!! TTCATCTCATATTATAATAA+TGG - chr1_1:17686873-17686892 None:intergenic 15.0%
!! AAAAAAATCAATGATTTGAT+TGG + chr1_1:17676581-17676600 Msa0011740:intron 15.0%
!! AAAAAATCAATGATTTGATT+GGG + chr1_1:17676582-17676601 Msa0011740:intron 15.0%
!! AATTCTATACCTATATTTAA+AGG - chr1_1:17687177-17687196 None:intergenic 15.0%
!! CTCTTAATTTCATTAATATA+TGG + chr1_1:17687365-17687384 Msa0011740:intron 15.0%
!! CAAAATTAAAAAGAGATTAA+AGG - chr1_1:17679335-17679354 None:intergenic 15.0%
!!! TTCTATTTTAATTTAACTCA+AGG - chr1_1:17679579-17679598 None:intergenic 15.0%
!! ATTAAAATGAAACTCATTAA+TGG + chr1_1:17690166-17690185 Msa0011740:intron 15.0%
!!! GATTATAAAAAAAGCAATTT+TGG - chr1_1:17682149-17682168 None:intergenic 15.0%
!!! TAAATAGCTTCTTTTTAAAT+TGG + chr1_1:17682171-17682190 Msa0011740:intron 15.0%
!!! TCATAAAAGTATTCAATTAA+TGG + chr1_1:17683157-17683176 Msa0011740:intron 15.0%
!! TTAATGATTTATCATTAACT+GGG - chr1_1:17684165-17684184 None:intergenic 15.0%
!! TTTAATGATTTATCATTAAC+TGG - chr1_1:17684166-17684185 None:intergenic 15.0%
!!! ATTACTTTATTCTGTTTTAT+TGG + chr1_1:17685059-17685078 Msa0011740:intron 15.0%
!!! TTCTTGAGTTTTTTTTTAAA+TGG + chr1_1:17696977-17696996 Msa0011740:intron 15.0%
!!! AGCAAACTATTTTATATATA+GGG - chr1_1:17699450-17699469 None:intergenic 15.0%
!!! TAGCAAACTATTTTATATAT+AGG - chr1_1:17699451-17699470 None:intergenic 15.0%
!!! ATTTTGAATTTTGATTTTCA+TGG + chr1_1:17700830-17700849 Msa0011740:three_prime_UTR 15.0%
!! TTTCTTTACATTACTTTGAT+AGG - chr1_1:17675306-17675325 None:intergenic 20.0%
!! GTAATGTAAAGAAAAGAAAA+TGG + chr1_1:17675312-17675331 Msa0011740:exon 20.0%
!! TGATAGATAACATTACATTA+GGG - chr1_1:17675657-17675676 None:intergenic 20.0%
!! AGTAAATAGAAGCAATAAAT+TGG - chr1_1:17675695-17675714 None:intergenic 20.0%
!! TTCTAAGTGAATATCTAATA+TGG + chr1_1:17675796-17675815 Msa0011740:intron 20.0%
!!! AAGTATACATTTAAGTTTCT+TGG + chr1_1:17676920-17676939 Msa0011740:intron 20.0%
!!! TCAAACAATTGTGAAATTTT+TGG + chr1_1:17677477-17677496 Msa0011740:intron 20.0%
!! AAGTCAATTTGCATTATATA+CGG - chr1_1:17677595-17677614 None:intergenic 20.0%
!!! GTAAATTATTATTGGTTTCT+AGG + chr1_1:17678265-17678284 Msa0011740:intron 20.0%
!! AAAGATATAGAGAAAGAATA+AGG - chr1_1:17678422-17678441 None:intergenic 20.0%
!!! TTTCTCTATATCTTTTATTG+AGG + chr1_1:17678427-17678446 Msa0011740:intron 20.0%
!! AAAATAAGGTATATTAATGG+AGG + chr1_1:17678827-17678846 Msa0011740:intron 20.0%
!!! ATAGATACAGTTTAATTTCT+AGG - chr1_1:17678914-17678933 None:intergenic 20.0%
!! AGAAATAAAATTCGTAACAT+TGG + chr1_1:17679762-17679781 Msa0011740:CDS 20.0%
!! GAAATAAAATTCGTAACATT+GGG + chr1_1:17679763-17679782 Msa0011740:CDS 20.0%
!! TATATTGTGTTATAGAGTTT+AGG + chr1_1:17679922-17679941 Msa0011740:intron 20.0%
!! TTGATTGTAATCTCATATAT+TGG - chr1_1:17680302-17680321 None:intergenic 20.0%
!! TCATTTGTTCAAATTACTAT+AGG + chr1_1:17680327-17680346 Msa0011740:intron 20.0%
!!! TAACTTTTCTCAATAATATG+AGG + chr1_1:17680448-17680467 Msa0011740:intron 20.0%
!!! TTTTTACATACAAACATTAG+TGG - chr1_1:17681109-17681128 None:intergenic 20.0%
!!! AAACTGTATAAATAAGCTTT+TGG + chr1_1:17681372-17681391 Msa0011740:intron 20.0%
!! AATAAGTTGTTTATCCAAAA+TGG - chr1_1:17681856-17681875 None:intergenic 20.0%
!! AGTTAAACAAAAACAAACTA+GGG - chr1_1:17682363-17682382 None:intergenic 20.0%
!! TAGTTAAACAAAAACAAACT+AGG - chr1_1:17682364-17682383 None:intergenic 20.0%
!! TAAGATGGTTATAAATCATT+TGG + chr1_1:17682418-17682437 Msa0011740:intron 20.0%
!!! AATTTAACTATTTCTTTTGC+CGG + chr1_1:17682563-17682582 Msa0011740:CDS 20.0%
!!! CACAACAATATTTTGTTAAA+AGG + chr1_1:17682742-17682761 Msa0011740:intron 20.0%
!!! ATGTCACTAACAATTTTAAA+AGG + chr1_1:17682819-17682838 Msa0011740:intron 20.0%
!!! TGTCACTAACAATTTTAAAA+GGG + chr1_1:17682820-17682839 Msa0011740:intron 20.0%
!!! ATTATTAGTTTCATGTCAAT+TGG + chr1_1:17683001-17683020 Msa0011740:intron 20.0%
!!! TGGATTGTTTAAAATAAGAT+AGG + chr1_1:17683021-17683040 Msa0011740:intron 20.0%
!! ATTGAAATCATAGTAAAACT+GGG - chr1_1:17683714-17683733 None:intergenic 20.0%
!! TATTGAAATCATAGTAAAAC+TGG - chr1_1:17683715-17683734 None:intergenic 20.0%
!! ATGATTTCAATATACTTTGT+AGG + chr1_1:17683723-17683742 Msa0011740:intron 20.0%
!!! TCTATATATTTGAGACTTTT+AGG + chr1_1:17683956-17683975 Msa0011740:intron 20.0%
!!! CTATATATTTGAGACTTTTA+GGG + chr1_1:17683957-17683976 Msa0011740:intron 20.0%
!! CTACTTACTATATTGTTTAT+TGG + chr1_1:17683994-17684013 Msa0011740:intron 20.0%
!! AATAAATGATAAATGAAGGA+TGG + chr1_1:17684186-17684205 Msa0011740:intron 20.0%
!!! CACACATCAATATTTTAAAA+TGG - chr1_1:17684334-17684353 None:intergenic 20.0%
!!! CATTTTAAAATATTGATGTG+TGG + chr1_1:17684332-17684351 Msa0011740:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr1_1:17685552-17685571 None:intergenic 20.0%
!!! TTCTTTAATTATTGATTGCA+AGG - chr1_1:17685759-17685778 None:intergenic 20.0%
!!! AAAACTTGTTTATCTAAAGT+TGG - chr1_1:17685971-17685990 None:intergenic 20.0%
!! TTTCTTTACATTACTTTGAT+AGG - chr1_1:17675306-17675325 None:intergenic 20.0%
!! GTAATGTAAAGAAAAGAAAA+TGG + chr1_1:17675312-17675331 Msa0011740:exon 20.0%
!!! ATAATTTGTTATTGTGTTTG+TGG + chr1_1:17686469-17686488 Msa0011740:intron 20.0%
!!! TAATTTGTTATTGTGTTTGT+GGG + chr1_1:17686470-17686489 Msa0011740:intron 20.0%
!! TGATAGATAACATTACATTA+GGG - chr1_1:17675657-17675676 None:intergenic 20.0%
!!! TTATGTTTTTGTTTTGTGTT+CGG + chr1_1:17686750-17686769 Msa0011740:intron 20.0%
!!! ATTTGAAATTGTTTTATCCA+AGG + chr1_1:17686781-17686800 Msa0011740:intron 20.0%
!! TTGATGTTACCTTTAAATAT+AGG + chr1_1:17687165-17687184 Msa0011740:intron 20.0%
!! TGAAACTAAGTGATAATATA+AGG - chr1_1:17687275-17687294 None:intergenic 20.0%
!! TATTAATGAAATTAAGAGAG+CGG - chr1_1:17687363-17687382 None:intergenic 20.0%
!! TTAACAAGTATAATGAAATG+TGG + chr1_1:17677364-17677383 Msa0011740:intron 20.0%
!!! TCAAACAATTGTGAAATTTT+TGG + chr1_1:17677477-17677496 Msa0011740:intron 20.0%
!!! GTAAATTATTATTGGTTTCT+AGG + chr1_1:17678265-17678284 Msa0011740:intron 20.0%
!! TGAAATTTCCATTCATTTAA+TGG - chr1_1:17688991-17689010 None:intergenic 20.0%
!!! TGCAAAAAATAAGGTATTAA+TGG + chr1_1:17689358-17689377 Msa0011740:intron 20.0%
!!! ATAGATACAGTTTAATTTCT+AGG - chr1_1:17678914-17678933 None:intergenic 20.0%
!!! AAGTTATTTTTCATTGAGTT+TGG + chr1_1:17679052-17679071 Msa0011740:intron 20.0%
!!! TTATTTCTTCTAAGTGAAAA+TGG - chr1_1:17679750-17679769 None:intergenic 20.0%
!! AGAAATAAAATTCGTAACAT+TGG + chr1_1:17679762-17679781 Msa0011740:CDS 20.0%
!! GAAATAAAATTCGTAACATT+GGG + chr1_1:17679763-17679782 Msa0011740:CDS 20.0%
!! TATATTGTGTTATAGAGTTT+AGG + chr1_1:17679922-17679941 Msa0011740:intron 20.0%
!! AATTTCAGTATATACTGAAT+TGG + chr1_1:17690559-17690578 Msa0011740:intron 20.0%
!! TTGATTGTAATCTCATATAT+TGG - chr1_1:17680302-17680321 None:intergenic 20.0%
!! TCATTTGTTCAAATTACTAT+AGG + chr1_1:17680327-17680346 Msa0011740:intron 20.0%
!!! TAACTTTTCTCAATAATATG+AGG + chr1_1:17680448-17680467 Msa0011740:intron 20.0%
!!! TTTTTACATACAAACATTAG+TGG - chr1_1:17681109-17681128 None:intergenic 20.0%
!!! AAACTGTATAAATAAGCTTT+TGG + chr1_1:17681372-17681391 Msa0011740:intron 20.0%
!! AATAAGTTGTTTATCCAAAA+TGG - chr1_1:17681856-17681875 None:intergenic 20.0%
!! AGTTAAACAAAAACAAACTA+GGG - chr1_1:17682363-17682382 None:intergenic 20.0%
!! TAGTTAAACAAAAACAAACT+AGG - chr1_1:17682364-17682383 None:intergenic 20.0%
!! TAAGATGGTTATAAATCATT+TGG + chr1_1:17682418-17682437 Msa0011740:intron 20.0%
!!! AATTTAACTATTTCTTTTGC+CGG + chr1_1:17682563-17682582 Msa0011740:CDS 20.0%
!!! CACAACAATATTTTGTTAAA+AGG + chr1_1:17682742-17682761 Msa0011740:intron 20.0%
!!! ATGTCACTAACAATTTTAAA+AGG + chr1_1:17682819-17682838 Msa0011740:intron 20.0%
!!! TGTCACTAACAATTTTAAAA+GGG + chr1_1:17682820-17682839 Msa0011740:intron 20.0%
!!! ATTATTAGTTTCATGTCAAT+TGG + chr1_1:17683001-17683020 Msa0011740:intron 20.0%
!!! TGGATTGTTTAAAATAAGAT+AGG + chr1_1:17683021-17683040 Msa0011740:intron 20.0%
!! ATTGAAATCATAGTAAAACT+GGG - chr1_1:17683714-17683733 None:intergenic 20.0%
!! TATTGAAATCATAGTAAAAC+TGG - chr1_1:17683715-17683734 None:intergenic 20.0%
!! ATGATTTCAATATACTTTGT+AGG + chr1_1:17683723-17683742 Msa0011740:intron 20.0%
!!! TCTATATATTTGAGACTTTT+AGG + chr1_1:17683956-17683975 Msa0011740:intron 20.0%
!!! CTATATATTTGAGACTTTTA+GGG + chr1_1:17683957-17683976 Msa0011740:intron 20.0%
!! CTACTTACTATATTGTTTAT+TGG + chr1_1:17683994-17684013 Msa0011740:intron 20.0%
!! AATAAATGATAAATGAAGGA+TGG + chr1_1:17684186-17684205 Msa0011740:intron 20.0%
!!! CACACATCAATATTTTAAAA+TGG - chr1_1:17684334-17684353 None:intergenic 20.0%
!!! CATTTTAAAATATTGATGTG+TGG + chr1_1:17684332-17684351 Msa0011740:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr1_1:17685552-17685571 None:intergenic 20.0%
!!! AAAACTTGTTTATCTAAAGT+TGG - chr1_1:17685971-17685990 None:intergenic 20.0%
!! TCATAAAAAATCTTCTGTTA+CGG + chr1_1:17697438-17697457 Msa0011740:intron 20.0%
!! TTAAAATGGGAAAATACTAA+TGG - chr1_1:17697641-17697660 None:intergenic 20.0%
!! TCATATACAACACTTAAAAT+GGG - chr1_1:17697654-17697673 None:intergenic 20.0%
!! ATCATATACAACACTTAAAA+TGG - chr1_1:17697655-17697674 None:intergenic 20.0%
!!! TATTAAGCAATCATTTTCTA+GGG - chr1_1:17697878-17697897 None:intergenic 20.0%
!!! TTATTAAGCAATCATTTTCT+AGG - chr1_1:17697879-17697898 None:intergenic 20.0%
!! GATTGCTTAATAAAAAAGTA+TGG + chr1_1:17697886-17697905 Msa0011740:intron 20.0%
!!! TATAATACCATCATAGTTTT+GGG - chr1_1:17698555-17698574 None:intergenic 20.0%
!!! TTATAATACCATCATAGTTT+TGG - chr1_1:17698556-17698575 None:intergenic 20.0%
!!! ATTTTAGAATTTTTAGAGCA+GGG - chr1_1:17698711-17698730 None:intergenic 20.0%
!! AAAAAGCTACAATTCTAATA+GGG - chr1_1:17699177-17699196 None:intergenic 20.0%
!!! TAATTTAACTTGTCATTGAA+TGG - chr1_1:17699304-17699323 None:intergenic 20.0%
!!! TTACAAATACTTTTTTATCC+AGG - chr1_1:17699526-17699545 None:intergenic 20.0%
!!! ACAAAACTGTAATATTTTCA+GGG + chr1_1:17699584-17699603 Msa0011740:intron 20.0%
!! TATAATAAACCTTCCATATA+GGG - chr1_1:17699909-17699928 None:intergenic 20.0%
!! GAAAACAAAGAAAGAAATTA+TGG - chr1_1:17700122-17700141 None:intergenic 20.0%
!!! TTGTATTTAAGATTGGTAAT+GGG - chr1_1:17700157-17700176 None:intergenic 20.0%
!!! ATTGTATTTAAGATTGGTAA+TGG - chr1_1:17700158-17700177 None:intergenic 20.0%
!!! TAGTGAATTGTATTTAAGAT+TGG - chr1_1:17700164-17700183 None:intergenic 20.0%
!!! TTGATGTTTTCAGATTATTA+TGG + chr1_1:17700633-17700652 Msa0011740:intron 20.0%
! GTGATAGATAACATTACATT+AGG - chr1_1:17675658-17675677 None:intergenic 25.0%
! AACACACACATATAATTCAT+GGG - chr1_1:17675839-17675858 None:intergenic 25.0%
! AAACACACACATATAATTCA+TGG - chr1_1:17675840-17675859 None:intergenic 25.0%
! ATGAATTATATGTGTGTGTT+TGG + chr1_1:17675839-17675858 Msa0011740:intron 25.0%
! ATTTAAACCAATAAGAGAGT+GGG - chr1_1:17675952-17675971 None:intergenic 25.0%
!!! CTTATTGGTTTAAATCATTG+CGG + chr1_1:17675957-17675976 Msa0011740:intron 25.0%
!!! TTATTGGTTTAAATCATTGC+GGG + chr1_1:17675958-17675977 Msa0011740:intron 25.0%
!!! TTCTTTTTTCCTCATTGATT+GGG + chr1_1:17676466-17676485 Msa0011740:intron 25.0%
!! TGATAAAGTTCGTCTTTTAT+TGG + chr1_1:17676739-17676758 Msa0011740:intron 25.0%
! CAGGAACATTTAGTAATATT+GGG - chr1_1:17676852-17676871 None:intergenic 25.0%
! CTCTTAATTTCATCAGTATA+TGG + chr1_1:17676874-17676893 Msa0011740:intron 25.0%
!! TTTTATTGTGTAAATCAGGT+TGG + chr1_1:17677197-17677216 Msa0011740:intron 25.0%
! AGCATAGATATGTCTAATAA+GGG - chr1_1:17677415-17677434 None:intergenic 25.0%
! TAGCATAGATATGTCTAATA+AGG - chr1_1:17677416-17677435 None:intergenic 25.0%
! GCTAAAATCTTCATACAATT+TGG + chr1_1:17677432-17677451 Msa0011740:intron 25.0%
! CATATACGTATCAAAATTGT+AGG + chr1_1:17677536-17677555 Msa0011740:intron 25.0%
!!! ATTGACTTGCAATTTTTTTC+AGG + chr1_1:17677607-17677626 Msa0011740:intron 25.0%
! ATTTCGAAATTTATAGTCAG+AGG + chr1_1:17677843-17677862 Msa0011740:intron 25.0%
! TTCAATGCTTCTTAGAAATA+TGG + chr1_1:17678289-17678308 Msa0011740:intron 25.0%
! GAAAGAATAAGGAAAACTTA+CGG - chr1_1:17678411-17678430 None:intergenic 25.0%
! GTTCAAATAGCATATTCTAA+AGG - chr1_1:17678516-17678535 None:intergenic 25.0%
! TATCAATCTAGTTGAATTTC+TGG - chr1_1:17678872-17678891 None:intergenic 25.0%
! ATTGTCAAACATTGAAAAGT+TGG - chr1_1:17678941-17678960 None:intergenic 25.0%
! AACATAACAAAGTGACATTA+TGG - chr1_1:17679133-17679152 None:intergenic 25.0%
!!! TTCTACAAAACTGATTTGTA+AGG - chr1_1:17679237-17679256 None:intergenic 25.0%
!!! TTTTTGTCAATTGACTTCAT+AGG - chr1_1:17679412-17679431 None:intergenic 25.0%
!!! TTTTCCCTTATTTTCTTCAT+TGG - chr1_1:17679457-17679476 None:intergenic 25.0%
! AAGAAAATAAGGGAAAAGAT+AGG + chr1_1:17679460-17679479 Msa0011740:intron 25.0%
!! AACTCAAGGATTTAAAGTAT+CGG - chr1_1:17679565-17679584 None:intergenic 25.0%
!!! GAGTTTCATTTTAATTGCAT+TGG - chr1_1:17679632-17679651 None:intergenic 25.0%
!! TACCTTCTAAGAAATACATA+TGG - chr1_1:17679956-17679975 None:intergenic 25.0%
! AATTTCAGTCTATACTGAAT+TGG + chr1_1:17680034-17680053 Msa0011740:intron 25.0%
! ATTAATAAAAGGTCCAAATG+AGG - chr1_1:17680094-17680113 None:intergenic 25.0%
!!! ATTTTGAAGATTTGTTTGGA+GGG - chr1_1:17680758-17680777 None:intergenic 25.0%
!!! ACTCATTTTGAAGATTTGTT+TGG - chr1_1:17680762-17680781 None:intergenic 25.0%
! GAAAATAATATTTGTTCAGG+AGG - chr1_1:17680820-17680839 None:intergenic 25.0%
! AGGGAAAATAATATTTGTTC+AGG - chr1_1:17680823-17680842 None:intergenic 25.0%
!! TGTGATTTTCTTTTTTCTCT+TGG - chr1_1:17681288-17681307 None:intergenic 25.0%
! AAAATGAGAATGTGAAGTTA+GGG - chr1_1:17681700-17681719 None:intergenic 25.0%
!!! TGAAGTTTAGTTTTTGATCT+AGG + chr1_1:17681829-17681848 Msa0011740:intron 25.0%
! AAGTTTATTCAAAATGTTCG+AGG + chr1_1:17681993-17682012 Msa0011740:intron 25.0%
!! TACTTCAAGTTCATTTACAA+TGG - chr1_1:17682474-17682493 None:intergenic 25.0%
! TTTCTAATGTTCTCAACTAA+AGG + chr1_1:17682796-17682815 Msa0011740:intron 25.0%
! AAGATAGGATGAATGAAATA+TGG + chr1_1:17683036-17683055 Msa0011740:intron 25.0%
! TCTGATATCTATGTATCAAA+AGG - chr1_1:17683220-17683239 None:intergenic 25.0%
!! GATATCAGAATATTTTCTGT+TGG + chr1_1:17683231-17683250 Msa0011740:intron 25.0%
! ATGCCTAATAAAATTAAACG+AGG + chr1_1:17683319-17683338 Msa0011740:intron 25.0%
! TGCCTAATAAAATTAAACGA+GGG + chr1_1:17683320-17683339 Msa0011740:intron 25.0%
! GTTCAAATTTCAAAGTTGAA+AGG - chr1_1:17683381-17683400 None:intergenic 25.0%
!!! ACTTTGAAATTTGAACAAAG+AGG + chr1_1:17683385-17683404 Msa0011740:intron 25.0%
! TAAAATAAGAAGGTTTATGC+AGG + chr1_1:17683410-17683429 Msa0011740:intron 25.0%
!! GATAAATCGCTAAACTATTT+TGG - chr1_1:17683474-17683493 None:intergenic 25.0%
!! ATATTTCCATAGTCTGAAAT+AGG - chr1_1:17683539-17683558 None:intergenic 25.0%
! ATTTCAGACTATGGAAATAT+TGG + chr1_1:17683539-17683558 Msa0011740:intron 25.0%
!!! TTAAAGTTTACAGGGTTTTT+TGG - chr1_1:17683807-17683826 None:intergenic 25.0%
! TAGTATAAAGAGAATGGAAA+AGG + chr1_1:17683920-17683939 Msa0011740:CDS 25.0%
! CTTGATATTAGTCAAAACAT+AGG - chr1_1:17684097-17684116 None:intergenic 25.0%
!!! CTATGTTTTGACTAATATCA+AGG + chr1_1:17684095-17684114 Msa0011740:intron 25.0%
! ATTAACTGGGAAAATGTATT+AGG - chr1_1:17684152-17684171 None:intergenic 25.0%
! AAATAGCAAAGTATAGAAGA+TGG + chr1_1:17684215-17684234 Msa0011740:intron 25.0%
!! TCAGCATTTGTCTTTTAAAT+GGG + chr1_1:17684426-17684445 Msa0011740:intron 25.0%
!! CAATTTTGTATGATTTCTCT+TGG + chr1_1:17684549-17684568 Msa0011740:intron 25.0%
! TGAATTACAAAATCTCAACA+TGG - chr1_1:17684703-17684722 None:intergenic 25.0%
!! ATATTTCCAAGGAAAGTATA+TGG - chr1_1:17684789-17684808 None:intergenic 25.0%
!! TTTTCAATTTCCCTTTTATG+GGG - chr1_1:17685160-17685179 None:intergenic 25.0%
!! CTTTTCAATTTCCCTTTTAT+GGG - chr1_1:17685161-17685180 None:intergenic 25.0%
!! ACTTTTCAATTTCCCTTTTA+TGG - chr1_1:17685162-17685181 None:intergenic 25.0%
!!! GTTTTCTGTTTTTTTCACTA+AGG - chr1_1:17685621-17685640 None:intergenic 25.0%
!!! ATTTGATTTGAAGCAATAGT+AGG - chr1_1:17685722-17685741 None:intergenic 25.0%
! CATGTTTAGCAACTAAAATT+TGG - chr1_1:17685797-17685816 None:intergenic 25.0%
! ATGTTCTGTTTAGGAATTTA+AGG + chr1_1:17686035-17686054 Msa0011740:intron 25.0%
!!! TTTAAGGAAAAGTGTTTAGA+AGG + chr1_1:17686051-17686070 Msa0011740:intron 25.0%
!!! TTAAGGAAAAGTGTTTAGAA+GGG + chr1_1:17686052-17686071 Msa0011740:intron 25.0%
! GTGATAGATAACATTACATT+AGG - chr1_1:17675658-17675677 None:intergenic 25.0%
! TTATTGGTAGATAGATGAAA+TGG - chr1_1:17687039-17687058 None:intergenic 25.0%
! TTAAAAATGAAAGGTGAACT+TGG + chr1_1:17687120-17687139 Msa0011740:intron 25.0%
!! TAAAGGTAACATCAACTTTT+GGG - chr1_1:17687160-17687179 None:intergenic 25.0%
!! TTAAAGGTAACATCAACTTT+TGG - chr1_1:17687161-17687180 None:intergenic 25.0%
!! TGATTAACATTTTGCAATTC+CGG - chr1_1:17687211-17687230 None:intergenic 25.0%
! ATTAATGAAATTAAGAGAGC+GGG - chr1_1:17687362-17687381 None:intergenic 25.0%
! AAATAAGCATTTCAGTTTCT+TGG + chr1_1:17687411-17687430 Msa0011740:intron 25.0%
! AAGACTCAAACTATATATGT+TGG + chr1_1:17687579-17687598 Msa0011740:intron 25.0%
!! TTTTATTGTGTAAATCAGGT+TGG + chr1_1:17677197-17677216 Msa0011740:intron 25.0%
! AGCATAGATATGTCTAATAA+GGG - chr1_1:17677415-17677434 None:intergenic 25.0%
! CATATACGTATCAAAATTGT+AGG + chr1_1:17677536-17677555 Msa0011740:intron 25.0%
!!! ATTGACTTGCAATTTTTTTC+AGG + chr1_1:17677607-17677626 Msa0011740:intron 25.0%
! ATTTCGAAATTTATAGTCAG+AGG + chr1_1:17677843-17677862 Msa0011740:intron 25.0%
! TTCAATGCTTCATAGAAATA+TGG + chr1_1:17688787-17688806 Msa0011740:intron 25.0%
! GAAAGAATGAAGAAAACTTA+AGG - chr1_1:17688911-17688930 None:intergenic 25.0%
! GAGAATTATAAATAACTAGC+TGG - chr1_1:17689117-17689136 None:intergenic 25.0%
!! AAAATAAGGTATTAATGGAG+AGG + chr1_1:17689363-17689382 Msa0011740:intron 25.0%
!! ATCTAGAATTTCTGATATCA+TGG - chr1_1:17689400-17689419 None:intergenic 25.0%
! ATTGTCAAACATTGAAAAGT+TGG - chr1_1:17678941-17678960 None:intergenic 25.0%
! AACATAACAAAGTGACATTA+TGG - chr1_1:17679133-17679152 None:intergenic 25.0%
!!! CAGTTTTGTAGAATTGTATT+AGG + chr1_1:17689774-17689793 Msa0011740:intron 25.0%
! CTAACTCATTCTTAGAATTT+GGG - chr1_1:17689805-17689824 None:intergenic 25.0%
! ACTAACTCATTCTTAGAATT+TGG - chr1_1:17689806-17689825 None:intergenic 25.0%
!!! ATTTGTTCCTTTTAGAAGAT+TGG + chr1_1:17689885-17689904 Msa0011740:intron 25.0%
!! AACTTGCATAGAAAACTTTT+TGG - chr1_1:17679428-17679447 None:intergenic 25.0%
!!! TTTTCCCTTATTTTCTTCAT+TGG - chr1_1:17679457-17679476 None:intergenic 25.0%
! AAGAAAATAAGGGAAAAGAT+AGG + chr1_1:17679460-17679479 Msa0011740:intron 25.0%
!! AACTCAAGGATTTAAAGTAT+CGG - chr1_1:17679565-17679584 None:intergenic 25.0%
!!! GAGTTTCATTTTAATTGCAT+TGG - chr1_1:17679632-17679651 None:intergenic 25.0%
!! TACCTTCTAAGAAATACATA+TGG - chr1_1:17679956-17679975 None:intergenic 25.0%
! ATTAATAAAAGGTCCAAATG+AGG - chr1_1:17680094-17680113 None:intergenic 25.0%
!!! ATTTTGAAGATTTGTTTGGA+GGG - chr1_1:17680758-17680777 None:intergenic 25.0%
!!! ACTCATTTTGAAGATTTGTT+TGG - chr1_1:17680762-17680781 None:intergenic 25.0%
! GAAAATAATATTTGTTCAGG+AGG - chr1_1:17680820-17680839 None:intergenic 25.0%
! AGGGAAAATAATATTTGTTC+AGG - chr1_1:17680823-17680842 None:intergenic 25.0%
!! TGTGATTTTCTTTTTTCTCT+TGG - chr1_1:17681288-17681307 None:intergenic 25.0%
! AAAATGAGAATGTGAAGTTA+GGG - chr1_1:17681700-17681719 None:intergenic 25.0%
!!! TGAAGTTTAGTTTTTGATCT+AGG + chr1_1:17681829-17681848 Msa0011740:intron 25.0%
! AAGTTTATTCAAAATGTTCG+AGG + chr1_1:17681993-17682012 Msa0011740:intron 25.0%
!! TACTTCAAGTTCATTTACAA+TGG - chr1_1:17682474-17682493 None:intergenic 25.0%
! TTTCTAATGTTCTCAACTAA+AGG + chr1_1:17682796-17682815 Msa0011740:intron 25.0%
! AAGATAGGATGAATGAAATA+TGG + chr1_1:17683036-17683055 Msa0011740:intron 25.0%
! TCTGATATCTATGTATCAAA+AGG - chr1_1:17683220-17683239 None:intergenic 25.0%
!! GATATCAGAATATTTTCTGT+TGG + chr1_1:17683231-17683250 Msa0011740:intron 25.0%
! ATGCCTAATAAAATTAAACG+AGG + chr1_1:17683319-17683338 Msa0011740:intron 25.0%
! TGCCTAATAAAATTAAACGA+GGG + chr1_1:17683320-17683339 Msa0011740:intron 25.0%
! GTTCAAATTTCAAAGTTGAA+AGG - chr1_1:17683381-17683400 None:intergenic 25.0%
!!! ACTTTGAAATTTGAACAAAG+AGG + chr1_1:17683385-17683404 Msa0011740:intron 25.0%
! TAAAATAAGAAGGTTTATGC+AGG + chr1_1:17683410-17683429 Msa0011740:intron 25.0%
!! GATAAATCGCTAAACTATTT+TGG - chr1_1:17683474-17683493 None:intergenic 25.0%
!! ATATTTCCATAGTCTGAAAT+AGG - chr1_1:17683539-17683558 None:intergenic 25.0%
! ATTTCAGACTATGGAAATAT+TGG + chr1_1:17683539-17683558 Msa0011740:intron 25.0%
!!! TTAAAGTTTACAGGGTTTTT+TGG - chr1_1:17683807-17683826 None:intergenic 25.0%
! TAGTATAAAGAGAATGGAAA+AGG + chr1_1:17683920-17683939 Msa0011740:CDS 25.0%
! CTTGATATTAGTCAAAACAT+AGG - chr1_1:17684097-17684116 None:intergenic 25.0%
!!! CTATGTTTTGACTAATATCA+AGG + chr1_1:17684095-17684114 Msa0011740:intron 25.0%
! ATTAACTGGGAAAATGTATT+AGG - chr1_1:17684152-17684171 None:intergenic 25.0%
! AAATAGCAAAGTATAGAAGA+TGG + chr1_1:17684215-17684234 Msa0011740:intron 25.0%
!! TCAGCATTTGTCTTTTAAAT+GGG + chr1_1:17684426-17684445 Msa0011740:intron 25.0%
!! CAATTTTGTATGATTTCTCT+TGG + chr1_1:17684549-17684568 Msa0011740:intron 25.0%
! TGAATTACAAAATCTCAACA+TGG - chr1_1:17684703-17684722 None:intergenic 25.0%
!! ATATTTCCAAGGAAAGTATA+TGG - chr1_1:17684789-17684808 None:intergenic 25.0%
!! TTTTCAATTTCCCTTTTATG+GGG - chr1_1:17685160-17685179 None:intergenic 25.0%
!! CTTTTCAATTTCCCTTTTAT+GGG - chr1_1:17685161-17685180 None:intergenic 25.0%
!! ACTTTTCAATTTCCCTTTTA+TGG - chr1_1:17685162-17685181 None:intergenic 25.0%
!!! GTTTTCTGTTTTTTTCACTA+AGG - chr1_1:17685621-17685640 None:intergenic 25.0%
!!! ATTTGATTTGAAGCAATAGT+AGG - chr1_1:17685722-17685741 None:intergenic 25.0%
!! TTCTTTAATTATTGGTTGCA+AGG - chr1_1:17696288-17696307 None:intergenic 25.0%
! CATGTTTAGCAACTAAAATT+TGG - chr1_1:17685797-17685816 None:intergenic 25.0%
! ATGTTCTGTTTAGGAATTTA+AGG + chr1_1:17686035-17686054 Msa0011740:intron 25.0%
!!! TTTAAGGAAAAGTGTTTAGA+AGG + chr1_1:17686051-17686070 Msa0011740:intron 25.0%
!!! TTAAGGAAAAGTGTTTAGAA+GGG + chr1_1:17686052-17686071 Msa0011740:intron 25.0%
! AATAATCCATGAACAACAAA+AGG - chr1_1:17696957-17696976 None:intergenic 25.0%
! AAATTATTCGAAAACTGAAG+AGG + chr1_1:17697058-17697077 Msa0011740:CDS 25.0%
! AATCAAAAATTCATGCTTGT+AGG + chr1_1:17697322-17697341 Msa0011740:intron 25.0%
! ACCATTGTTAAAAATGAAGA+AGG + chr1_1:17697702-17697721 Msa0011740:CDS 25.0%
!!! ACCTTCTTCATTTTTAACAA+TGG - chr1_1:17697706-17697725 None:intergenic 25.0%
! ATTGTTAAAAATGAAGAAGG+TGG + chr1_1:17697705-17697724 Msa0011740:CDS 25.0%
!! ATTAAGCAATCATTTTCTAG+GGG - chr1_1:17697877-17697896 None:intergenic 25.0%
!! ATTTTGAATTGCACTTTTGA+AGG + chr1_1:17697940-17697959 Msa0011740:intron 25.0%
!! TTTTGAATTGCACTTTTGAA+GGG + chr1_1:17697941-17697960 Msa0011740:intron 25.0%
! GGACTCTCAATAAAATTAAA+GGG - chr1_1:17698130-17698149 None:intergenic 25.0%
!!! TTTTAGAATTTTTAGAGCAG+GGG - chr1_1:17698710-17698729 None:intergenic 25.0%
!!! GATTTTAGAATTTTTAGAGC+AGG - chr1_1:17698712-17698731 None:intergenic 25.0%
! GCATTAAACGAGTAAAATAA+AGG - chr1_1:17698784-17698803 None:intergenic 25.0%
!! TTTGATAATTCAGACATGAA+AGG + chr1_1:17698807-17698826 Msa0011740:intron 25.0%
!! TTGATAATTCAGACATGAAA+GGG + chr1_1:17698808-17698827 Msa0011740:intron 25.0%
!! GAAGTACTAAAAATTTGCAA+TGG + chr1_1:17698830-17698849 Msa0011740:intron 25.0%
! AAAAGCTACAATTCTAATAG+GGG - chr1_1:17699176-17699195 None:intergenic 25.0%
! GAAAAAGCTACAATTCTAAT+AGG - chr1_1:17699178-17699197 None:intergenic 25.0%
! AAATATAAGCAGTTGAAAGA+AGG - chr1_1:17699256-17699275 None:intergenic 25.0%
! AATCATGTGTTCAATCTTTA+GGG - chr1_1:17699483-17699502 None:intergenic 25.0%
! AAATCATGTGTTCAATCTTT+AGG - chr1_1:17699484-17699503 None:intergenic 25.0%
!! CACAAAACTGTAATATTTTC+AGG + chr1_1:17699583-17699602 Msa0011740:intron 25.0%
!! CAAAACTGTAATATTTTCAG+GGG + chr1_1:17699585-17699604 Msa0011740:intron 25.0%
! CTATAATAAACCTTCCATAT+AGG - chr1_1:17699910-17699929 None:intergenic 25.0%
! CTATATGGAAGGTTTATTAT+AGG + chr1_1:17699908-17699927 Msa0011740:intron 25.0%
! GAAATGAGTTAAGAAAAATG+CGG + chr1_1:17699937-17699956 Msa0011740:intron 25.0%
! TTATAAGGAATAATGAGCAT+GGG + chr1_1:17699997-17700016 Msa0011740:intron 25.0%
! CAGTATTAAAAATAGTCACA+TGG - chr1_1:17700299-17700318 None:intergenic 25.0%
! AATTTATGCATGGAGAAAAA+TGG - chr1_1:17700598-17700617 None:intergenic 25.0%
! TTTCTCCATGCATAAATTTA+TGG + chr1_1:17700600-17700619 Msa0011740:intron 25.0%
!!! TTTGATTTTCATGGAATATC+AGG + chr1_1:17700839-17700858 Msa0011740:three_prime_UTR 25.0%
!! TTGATTTTCATGGAATATCA+GGG + chr1_1:17700840-17700859 Msa0011740:three_prime_UTR 25.0%
!!! TATTTCTCTTTCTAGAATGT+TGG + chr1_1:17700885-17700904 Msa0011740:three_prime_UTR 25.0%
!!! TGTTATGGTTGTTGTTTTTG+TGG + chr1_1:17675497-17675516 Msa0011740:intron 30.0%
!!! GTTATGGTTGTTGTTTTTGT+GGG + chr1_1:17675498-17675517 Msa0011740:intron 30.0%
TGTCTTATGCATGGATAATA+TGG + chr1_1:17675748-17675767 Msa0011740:intron 30.0%
GATTTAAACCAATAAGAGAG+TGG - chr1_1:17675953-17675972 None:intergenic 30.0%
AAAATTGAACCTACACAAAG+TGG + chr1_1:17675992-17676011 Msa0011740:intron 30.0%
TAGTTAAAAGCGAGTTAAAC+CGG + chr1_1:17676252-17676271 Msa0011740:intron 30.0%
ATAAACGTTAAACGCATGTT+TGG - chr1_1:17676353-17676372 None:intergenic 30.0%
!!! CTTCTTTTTTCCTCATTGAT+TGG + chr1_1:17676465-17676484 Msa0011740:intron 30.0%
! ATAAAGGGAACATCAACTTT+TGG - chr1_1:17676675-17676694 None:intergenic 30.0%
GAAACTAAGTGAATCACATA+AGG - chr1_1:17676789-17676808 None:intergenic 30.0%
GCAGGAACATTTAGTAATAT+TGG - chr1_1:17676853-17676872 None:intergenic 30.0%
TATGGTTGTCTTGAATGATA+AGG + chr1_1:17676892-17676911 Msa0011740:intron 30.0%
! CATTTAAGTTTCTTGGTTAC+TGG + chr1_1:17676927-17676946 Msa0011740:intron 30.0%
ACATATAATGCATTAGGCAT+TGG - chr1_1:17676993-17677012 None:intergenic 30.0%
CCTTCAACATATAATGCATT+AGG - chr1_1:17676999-17677018 None:intergenic 30.0%
CCTAATGCATTATATGTTGA+AGG + chr1_1:17676996-17677015 Msa0011740:CDS 30.0%
! ATTTGAGTCATACCCTATTT+TGG - chr1_1:17677073-17677092 None:intergenic 30.0%
TGTATGTCATAAACTAGTCA+AGG - chr1_1:17677124-17677143 None:intergenic 30.0%
! GAGCTTTTATTGTGTAAATC+AGG + chr1_1:17677193-17677212 Msa0011740:intron 30.0%
TTTGCATTATATACGGTGTT+AGG - chr1_1:17677588-17677607 None:intergenic 30.0%
!!! ATTTTTTTCAGGTAGAGAAG+TGG + chr1_1:17677618-17677637 Msa0011740:intron 30.0%
!!! TTTTTTTCAGGTAGAGAAGT+GGG + chr1_1:17677619-17677638 Msa0011740:intron 30.0%
! CAGCTCTAATTAAAGAATCA+GGG - chr1_1:17677685-17677704 None:intergenic 30.0%
! ACAGCTCTAATTAAAGAATC+AGG - chr1_1:17677686-17677705 None:intergenic 30.0%
! CTGATGATGTTGATGAATAT+CGG + chr1_1:17677774-17677793 Msa0011740:CDS 30.0%
TTGAATGTATCTACATGTGT+TGG - chr1_1:17678231-17678250 None:intergenic 30.0%
CTAACATATTTAGCCAACTT+CGG - chr1_1:17678327-17678346 None:intergenic 30.0%
GAGAATTAGAAATATCTAGC+TGG - chr1_1:17678581-17678600 None:intergenic 30.0%
TGCATTTGCATGGATAATAA+TGG + chr1_1:17678601-17678620 Msa0011740:intron 30.0%
ATTTGCATGGATAATAATGG+TGG + chr1_1:17678604-17678623 Msa0011740:intron 30.0%
TTGCTCTTGTCAAATAGATT+GGG + chr1_1:17678632-17678651 Msa0011740:intron 30.0%
TGCACGAAATGCAAAAAATA+AGG + chr1_1:17678813-17678832 Msa0011740:CDS 30.0%
!! TAGTTGAATTTCTGGTATCA+TGG - chr1_1:17678864-17678883 None:intergenic 30.0%
! ATACAGTTTAATTTCTAGGC+AGG - chr1_1:17678910-17678929 None:intergenic 30.0%
!! AGATAAACTTGGTTTGGAAT+CGG + chr1_1:17679028-17679047 Msa0011740:intron 30.0%
!! CAGTTTTGTAGAATTGTGTT+AGG + chr1_1:17679244-17679263 Msa0011740:intron 30.0%
CGAACTCATTCTTAGAATTT+GGG - chr1_1:17679275-17679294 None:intergenic 30.0%
ACGAACTCATTCTTAGAATT+TGG - chr1_1:17679276-17679295 None:intergenic 30.0%
!! ATTTGTTCCTTTTAGAAGAC+TGG + chr1_1:17679358-17679377 Msa0011740:intron 30.0%
ATGCACCAATGAAGAAAATA+AGG + chr1_1:17679449-17679468 Msa0011740:intron 30.0%
TGCACCAATGAAGAAAATAA+GGG + chr1_1:17679450-17679469 Msa0011740:intron 30.0%
TAGGCAAAAGTTAAGATAGA+TGG + chr1_1:17679479-17679498 Msa0011740:intron 30.0%
AGGCAAAAGTTAAGATAGAT+GGG + chr1_1:17679480-17679499 Msa0011740:intron 30.0%
TTAAAGAACTTGACCTTGAA+TGG - chr1_1:17679539-17679558 None:intergenic 30.0%
TCAAATTATTGGGAAGCTAT+TGG + chr1_1:17679693-17679712 Msa0011740:CDS 30.0%
TTGGTTATATTAACCATTGC+AGG + chr1_1:17679893-17679912 Msa0011740:intron 30.0%
CAATATACTATTTCCTGCAA+TGG - chr1_1:17679909-17679928 None:intergenic 30.0%
AGCCATATGTATTTCTTAGA+AGG + chr1_1:17679951-17679970 Msa0011740:intron 30.0%
TCTATCTATGTTGTAACACA+GGG + chr1_1:17680003-17680022 Msa0011740:intron 30.0%
AAAGCAAGGTTAAGACAATT+TGG + chr1_1:17680061-17680080 Msa0011740:intron 30.0%
!! AATATCGAAGATTTTGAGTG+AGG + chr1_1:17680477-17680496 Msa0011740:intron 30.0%
!! CATTTTGAAGATTTGTTTGG+AGG - chr1_1:17680759-17680778 None:intergenic 30.0%
TCAAATCGCAATCATATCAA+GGG - chr1_1:17680842-17680861 None:intergenic 30.0%
ATCAAATCGCAATCATATCA+AGG - chr1_1:17680843-17680862 None:intergenic 30.0%
!! AGTGGTTAGTTTATTAGAAG+AGG - chr1_1:17681091-17681110 None:intergenic 30.0%
GAGATCAATAACACAAGATA+TGG + chr1_1:17681145-17681164 Msa0011740:intron 30.0%
TGAATAATAATAGCATGAGG+AGG - chr1_1:17681265-17681284 None:intergenic 30.0%
TGGTGAATAATAATAGCATG+AGG - chr1_1:17681268-17681287 None:intergenic 30.0%
! TTTCTTTTCTCTTCATTTCG+TGG + chr1_1:17681426-17681445 Msa0011740:intron 30.0%
! TTCTTTTCTCTTCATTTCGT+GGG + chr1_1:17681427-17681446 Msa0011740:intron 30.0%
AAATGAGAATGTGAAGTTAG+GGG - chr1_1:17681699-17681718 None:intergenic 30.0%
CAAAATGAGAATGTGAAGTT+AGG - chr1_1:17681701-17681720 None:intergenic 30.0%
CCTAGATCACAAAATAAACT+TGG - chr1_1:17681776-17681795 None:intergenic 30.0%
!!! CCAAGTTTATTTTGTGATCT+AGG + chr1_1:17681773-17681792 Msa0011740:intron 30.0%
! TTTTTGATCTAGGTCCATTT+TGG + chr1_1:17681839-17681858 Msa0011740:intron 30.0%
AAGCTTATACACGTGTTTAT+CGG - chr1_1:17681896-17681915 None:intergenic 30.0%
! AAAACAGCTTATAGCTTGTA+TGG - chr1_1:17682199-17682218 None:intergenic 30.0%
!! GAGATTTTTCAGAAGAACTT+AGG - chr1_1:17682289-17682308 None:intergenic 30.0%
GTTATTAGGGATGAATAAGA+TGG + chr1_1:17682403-17682422 Msa0011740:intron 30.0%
TCATTTCGATTGATCCAAAA+TGG + chr1_1:17682693-17682712 Msa0011740:intron 30.0%
! AAGTATCATTCCATCCATTT+TGG - chr1_1:17682710-17682729 None:intergenic 30.0%
! TCAGAATATTTTCTGTTGGA+TGG + chr1_1:17683235-17683254 Msa0011740:intron 30.0%
!! TATTTTCTGTTGGATGGATT+TGG + chr1_1:17683241-17683260 Msa0011740:intron 30.0%
!! ATTTTCTGTTGGATGGATTT+GGG + chr1_1:17683242-17683261 Msa0011740:intron 30.0%
GCCTAATAAAATTAAACGAG+GGG + chr1_1:17683321-17683340 Msa0011740:intron 30.0%
!! ACCCCTCGTTTAATTTTATT+AGG - chr1_1:17683325-17683344 None:intergenic 30.0%
! CAAAGAGGTCTAAAATAAGA+AGG + chr1_1:17683400-17683419 Msa0011740:intron 30.0%
AGAGAGAGAAAAAAAAAGCA+TGG - chr1_1:17683505-17683524 None:intergenic 30.0%
CTTTATCCTATTTCAGACTA+TGG + chr1_1:17683530-17683549 Msa0011740:intron 30.0%
! TACATTTTCCAAACAAAGGT+CGG - chr1_1:17683765-17683784 None:intergenic 30.0%
AAACCCTGTAAACTTTAATG+TGG + chr1_1:17683809-17683828 Msa0011740:CDS 30.0%
TGTCCACATTAAAGTTTACA+GGG - chr1_1:17683815-17683834 None:intergenic 30.0%
TTGTCCACATTAAAGTTTAC+AGG - chr1_1:17683816-17683835 None:intergenic 30.0%
!! TGTTGGTAGTATAAAGAGAA+TGG + chr1_1:17683914-17683933 Msa0011740:CDS 30.0%
AATATAGTAAGTAGACTCTC+CGG - chr1_1:17683988-17684007 None:intergenic 30.0%
GACAATTACAAGATGTATGA+AGG + chr1_1:17684054-17684073 Msa0011740:intron 30.0%
!!! GGAGTGTAATTTTTTAGTTG+TGG + chr1_1:17684269-17684288 Msa0011740:intron 30.0%
ACAAATGCTGACAAAAATTC+AGG - chr1_1:17684417-17684436 None:intergenic 30.0%
! GTCAGCATTTGTCTTTTAAA+TGG + chr1_1:17684425-17684444 Msa0011740:intron 30.0%
TCTTGGTACATTATTTCCAT+GGG + chr1_1:17684566-17684585 Msa0011740:intron 30.0%
TACATATTCCCTTTCACAAA+TGG - chr1_1:17684599-17684618 None:intergenic 30.0%
! TATATGTTCTCTCTCGTTTT+TGG + chr1_1:17684755-17684774 Msa0011740:intron 30.0%
!! ATATGTTCTCTCTCGTTTTT+GGG + chr1_1:17684756-17684775 Msa0011740:intron 30.0%
TTTCCTTGGAAATATTTGCT+TGG + chr1_1:17684794-17684813 Msa0011740:intron 30.0%
AGATTTGCAATAGCATATCA+TGG - chr1_1:17684885-17684904 None:intergenic 30.0%
! TCTTTTGTCAATGCTCTTTT+AGG + chr1_1:17684928-17684947 Msa0011740:intron 30.0%
TTGAAAAGTGATTTCGTAGT+AGG + chr1_1:17685173-17685192 Msa0011740:intron 30.0%
TCATCCAGTATTAGACTATT+AGG + chr1_1:17685209-17685228 Msa0011740:intron 30.0%
AAAGCCTAATAGTCTAATAC+TGG - chr1_1:17685216-17685235 None:intergenic 30.0%
!! TTAGACTATTAGGCTTTGTT+TGG + chr1_1:17685219-17685238 Msa0011740:intron 30.0%
!! TAGACTATTAGGCTTTGTTT+GGG + chr1_1:17685220-17685239 Msa0011740:intron 30.0%
!!! TTTTCACTAAGGCTTTGTTT+GGG - chr1_1:17685610-17685629 None:intergenic 30.0%
!!! TTTTTCACTAAGGCTTTGTT+TGG - chr1_1:17685611-17685630 None:intergenic 30.0%
! AGAAAACTGATGATGAAATC+TGG + chr1_1:17685634-17685653 Msa0011740:intron 30.0%
! GAAAACTGATGATGAAATCT+GGG + chr1_1:17685635-17685654 Msa0011740:intron 30.0%
! AAAACTGATGATGAAATCTG+GGG + chr1_1:17685636-17685655 Msa0011740:intron 30.0%
AAATAGAAAGAGAAGGTTTC+TGG - chr1_1:17685699-17685718 None:intergenic 30.0%
TAGTAGGAAATAGAAAGAGA+AGG - chr1_1:17685706-17685725 None:intergenic 30.0%
CTTATCCAATTACTACTTGT+TGG + chr1_1:17686659-17686678 Msa0011740:intron 30.0%
!!! TTTGTTTTGTGTTCGGTATT+TGG + chr1_1:17686757-17686776 Msa0011740:intron 30.0%
!! ATAGAATTCATGCTGATTTC+CGG + chr1_1:17687189-17687208 Msa0011740:intron 30.0%
! AATCAAGTTCGTCTTTTATC+AGG + chr1_1:17687226-17687245 Msa0011740:intron 30.0%
! GGTTTTCTTCAATGATAACA+TGG + chr1_1:17687386-17687405 Msa0011740:intron 30.0%
TGTATGTCATAAACTAGTCA+AGG - chr1_1:17677124-17677143 None:intergenic 30.0%
! GAGCTTTTATTGTGTAAATC+AGG + chr1_1:17677193-17677212 Msa0011740:intron 30.0%
GAGCATAGATATGTCTAATA+AGG - chr1_1:17687913-17687932 None:intergenic 30.0%
!!! ATTTTTTTCAGGTAGAGAAG+TGG + chr1_1:17677618-17677637 Msa0011740:intron 30.0%
! CTGATGATGTTGATGAATAT+CGG + chr1_1:17677774-17677793 Msa0011740:CDS 30.0%
ACTCTAGATAGCAACTAATT+TGG + chr1_1:17688593-17688612 Msa0011740:intron 30.0%
ATAGCAACTAATTTGGTTGT+TGG + chr1_1:17688600-17688619 Msa0011740:intron 30.0%
TGGTTTGACTATTTCAGATT+AGG + chr1_1:17688620-17688639 Msa0011740:intron 30.0%
GGTTTGACTATTTCAGATTA+GGG + chr1_1:17688621-17688640 Msa0011740:intron 30.0%
ATATCAATACATGTCTGTGT+CGG - chr1_1:17688689-17688708 None:intergenic 30.0%
! TCTTTCTCGATGTCTTTTAT+TGG + chr1_1:17688925-17688944 Msa0011740:intron 30.0%
! CTTTCTCGATGTCTTTTATT+GGG + chr1_1:17688926-17688945 Msa0011740:intron 30.0%
! TTTCTCGATGTCTTTTATTG+GGG + chr1_1:17688927-17688946 Msa0011740:intron 30.0%
CTCTTTGCATAAGAATGAAT+TGG - chr1_1:17688960-17688979 None:intergenic 30.0%
TATAATTCTCTGCATTTGCA+TGG + chr1_1:17689127-17689146 Msa0011740:intron 30.0%
TGCATTTGCATGGATAATAA+TGG + chr1_1:17678601-17678620 Msa0011740:intron 30.0%
ATTTGCATGGATAATAATGG+TGG + chr1_1:17678604-17678623 Msa0011740:intron 30.0%
TTGCTCTTGTCAAATAGATT+GGG + chr1_1:17678632-17678651 Msa0011740:intron 30.0%
TGCACGAAATGCAAAAAATA+AGG + chr1_1:17678813-17678832 Msa0011740:CDS 30.0%
! ATACAGTTTAATTTCTAGGC+AGG - chr1_1:17678910-17678929 None:intergenic 30.0%
!! AGATAAACTTGGTTTGGAAT+CGG + chr1_1:17679028-17679047 Msa0011740:intron 30.0%
!! TTCTACAAAACTGACTTGTA+AGG - chr1_1:17689767-17689786 None:intergenic 30.0%
!! TTTTTGGCAATTGACTTCAT+AGG - chr1_1:17689941-17689960 None:intergenic 30.0%
ATGCACCAATGAAGAAAATA+AGG + chr1_1:17679449-17679468 Msa0011740:intron 30.0%
TGCACCAATGAAGAAAATAA+GGG + chr1_1:17679450-17679469 Msa0011740:intron 30.0%
TAGGCAAAAGTTAAGATAGA+TGG + chr1_1:17679479-17679498 Msa0011740:intron 30.0%
AGGCAAAAGTTAAGATAGAT+GGG + chr1_1:17679480-17679499 Msa0011740:intron 30.0%
TTAAAGAACTTGACCTTGAA+TGG - chr1_1:17679539-17679558 None:intergenic 30.0%
TCAAATTATTGGGAAGCTAT+TGG + chr1_1:17679693-17679712 Msa0011740:CDS 30.0%
TTGGTTATATTAACCATTGC+AGG + chr1_1:17679893-17679912 Msa0011740:intron 30.0%
CAATATACTATTTCCTGCAA+TGG - chr1_1:17679909-17679928 None:intergenic 30.0%
AGCCATATGTATTTCTTAGA+AGG + chr1_1:17679951-17679970 Msa0011740:intron 30.0%
TCTATCTATGTTGTAACACA+GGG + chr1_1:17680003-17680022 Msa0011740:intron 30.0%
AAAGCAAGGTTAAGACAATT+TGG + chr1_1:17680061-17680080 Msa0011740:intron 30.0%
!! AATATCGAAGATTTTGAGTG+AGG + chr1_1:17680477-17680496 Msa0011740:intron 30.0%
!! CATTTTGAAGATTTGTTTGG+AGG - chr1_1:17680759-17680778 None:intergenic 30.0%
TCAAATCGCAATCATATCAA+GGG - chr1_1:17680842-17680861 None:intergenic 30.0%
ATCAAATCGCAATCATATCA+AGG - chr1_1:17680843-17680862 None:intergenic 30.0%
!! AGTGGTTAGTTTATTAGAAG+AGG - chr1_1:17681091-17681110 None:intergenic 30.0%
GAGATCAATAACACAAGATA+TGG + chr1_1:17681145-17681164 Msa0011740:intron 30.0%
TGAATAATAATAGCATGAGG+AGG - chr1_1:17681265-17681284 None:intergenic 30.0%
TGGTGAATAATAATAGCATG+AGG - chr1_1:17681268-17681287 None:intergenic 30.0%
! TTTCTTTTCTCTTCATTTCG+TGG + chr1_1:17681426-17681445 Msa0011740:intron 30.0%
! TTCTTTTCTCTTCATTTCGT+GGG + chr1_1:17681427-17681446 Msa0011740:intron 30.0%
AAATGAGAATGTGAAGTTAG+GGG - chr1_1:17681699-17681718 None:intergenic 30.0%
CAAAATGAGAATGTGAAGTT+AGG - chr1_1:17681701-17681720 None:intergenic 30.0%
CCTAGATCACAAAATAAACT+TGG - chr1_1:17681776-17681795 None:intergenic 30.0%
!!! CCAAGTTTATTTTGTGATCT+AGG + chr1_1:17681773-17681792 Msa0011740:intron 30.0%
! TTTTTGATCTAGGTCCATTT+TGG + chr1_1:17681839-17681858 Msa0011740:intron 30.0%
AAGCTTATACACGTGTTTAT+CGG - chr1_1:17681896-17681915 None:intergenic 30.0%
! AAAACAGCTTATAGCTTGTA+TGG - chr1_1:17682199-17682218 None:intergenic 30.0%
!! GAGATTTTTCAGAAGAACTT+AGG - chr1_1:17682289-17682308 None:intergenic 30.0%
GTTATTAGGGATGAATAAGA+TGG + chr1_1:17682403-17682422 Msa0011740:intron 30.0%
TCATTTCGATTGATCCAAAA+TGG + chr1_1:17682693-17682712 Msa0011740:intron 30.0%
! TCAGAATATTTTCTGTTGGA+TGG + chr1_1:17683235-17683254 Msa0011740:intron 30.0%
!! TATTTTCTGTTGGATGGATT+TGG + chr1_1:17683241-17683260 Msa0011740:intron 30.0%
!! ATTTTCTGTTGGATGGATTT+GGG + chr1_1:17683242-17683261 Msa0011740:intron 30.0%
GCCTAATAAAATTAAACGAG+GGG + chr1_1:17683321-17683340 Msa0011740:intron 30.0%
!! ACCCCTCGTTTAATTTTATT+AGG - chr1_1:17683325-17683344 None:intergenic 30.0%
! CAAAGAGGTCTAAAATAAGA+AGG + chr1_1:17683400-17683419 Msa0011740:intron 30.0%
GAGAGAGAGAAAAAAAAGTA+TGG - chr1_1:17694033-17694052 None:intergenic 30.0%
CTTTATCCTATTTCAGACTA+TGG + chr1_1:17683530-17683549 Msa0011740:intron 30.0%
! TACATTTTCCAAACAAAGGT+CGG - chr1_1:17683765-17683784 None:intergenic 30.0%
AAACCCTGTAAACTTTAATG+TGG + chr1_1:17683809-17683828 Msa0011740:CDS 30.0%
TGTCCACATTAAAGTTTACA+GGG - chr1_1:17683815-17683834 None:intergenic 30.0%
TTGTCCACATTAAAGTTTAC+AGG - chr1_1:17683816-17683835 None:intergenic 30.0%
!! TGTTGGTAGTATAAAGAGAA+TGG + chr1_1:17683914-17683933 Msa0011740:CDS 30.0%
AATATAGTAAGTAGACTCTC+CGG - chr1_1:17683988-17684007 None:intergenic 30.0%
GACAATTACAAGATGTATGA+AGG + chr1_1:17684054-17684073 Msa0011740:intron 30.0%
AACTGAATGAATAGGTGATT+AGG + chr1_1:17684241-17684260 Msa0011740:intron 30.0%
!!! GGAGTGTAATTTTTTAGTTG+TGG + chr1_1:17684269-17684288 Msa0011740:intron 30.0%
ACAAATGCTGACAAAAATTC+AGG - chr1_1:17684417-17684436 None:intergenic 30.0%
! GTCAGCATTTGTCTTTTAAA+TGG + chr1_1:17684425-17684444 Msa0011740:intron 30.0%
TCTTGGTACATTATTTCCAT+GGG + chr1_1:17684566-17684585 Msa0011740:intron 30.0%
TACATATTCCCTTTCACAAA+TGG - chr1_1:17684599-17684618 None:intergenic 30.0%
! TATATGTTCTCTCTCGTTTT+TGG + chr1_1:17684755-17684774 Msa0011740:intron 30.0%
!! ATATGTTCTCTCTCGTTTTT+GGG + chr1_1:17684756-17684775 Msa0011740:intron 30.0%
TTTCCTTGGAAATATTTGCT+TGG + chr1_1:17684794-17684813 Msa0011740:intron 30.0%
AGATTTGCAATAGCATATCA+TGG - chr1_1:17684885-17684904 None:intergenic 30.0%
! TCTTTTGTCAATGCTCTTTT+AGG + chr1_1:17684928-17684947 Msa0011740:intron 30.0%
TTGAAAAGTGATTTCGTAGT+AGG + chr1_1:17685173-17685192 Msa0011740:intron 30.0%
TCATCCAGTATTAGACTATT+AGG + chr1_1:17685209-17685228 Msa0011740:intron 30.0%
AAAGCCTAATAGTCTAATAC+TGG - chr1_1:17685216-17685235 None:intergenic 30.0%
!! TTAGACTATTAGGCTTTGTT+TGG + chr1_1:17685219-17685238 Msa0011740:intron 30.0%
!! TAGACTATTAGGCTTTGTTT+GGG + chr1_1:17685220-17685239 Msa0011740:intron 30.0%
!!! TTTTCACTAAGGCTTTGTTT+GGG - chr1_1:17685610-17685629 None:intergenic 30.0%
!!! TTTTTCACTAAGGCTTTGTT+TGG - chr1_1:17685611-17685630 None:intergenic 30.0%
! AGAAAACTGATGATGAAATC+TGG + chr1_1:17685634-17685653 Msa0011740:intron 30.0%
! GAAAACTGATGATGAAATCT+GGG + chr1_1:17685635-17685654 Msa0011740:intron 30.0%
! AAAACTGATGATGAAATCTG+GGG + chr1_1:17685636-17685655 Msa0011740:intron 30.0%
AAATAGAAAGAGAAGGTTTC+TGG - chr1_1:17685699-17685718 None:intergenic 30.0%
TAGTAGGAAATAGAAAGAGA+AGG - chr1_1:17685706-17685725 None:intergenic 30.0%
AGGGAAAACCATAAAAACAA+AGG + chr1_1:17696734-17696753 Msa0011740:intron 30.0%
!!! AAGTAGTGCCTTTGTTTTTA+TGG - chr1_1:17696745-17696764 None:intergenic 30.0%
!!! GATTTTCCTTTTGTTGTTCA+TGG + chr1_1:17696948-17696967 Msa0011740:intron 30.0%
AGGCAATTAAAGGCAAAAAA+TGG - chr1_1:17697207-17697226 None:intergenic 30.0%
TTTGATTAAGAAGACCACAT+AGG - chr1_1:17697309-17697328 None:intergenic 30.0%
! CAAGGGTATGTTTAAATAGT+TGG + chr1_1:17697571-17697590 Msa0011740:intron 30.0%
GGAAAATACTAATGGAGTAA+AGG - chr1_1:17697633-17697652 None:intergenic 30.0%
TATTTATCAGACTATGTGCA+GGG + chr1_1:17698009-17698028 Msa0011740:intron 30.0%
GGGACTCTCAATAAAATTAA+AGG - chr1_1:17698131-17698150 None:intergenic 30.0%
ATGTGGTCTGAATATTGTTT+AGG + chr1_1:17698164-17698183 Msa0011740:intron 30.0%
TGTGGTCTGAATATTGTTTA+GGG + chr1_1:17698165-17698184 Msa0011740:intron 30.0%
! ACTCTACAAACCAACTTTTA+AGG - chr1_1:17698202-17698221 None:intergenic 30.0%
! GGTGGTATTTTATAGATTCT+GGG - chr1_1:17698234-17698253 None:intergenic 30.0%
! TGGTGGTATTTTATAGATTC+TGG - chr1_1:17698235-17698254 None:intergenic 30.0%
TATGGGACACATATAAAATC+TGG - chr1_1:17698255-17698274 None:intergenic 30.0%
CCTCAATAGTGTTTATTAGT+GGG + chr1_1:17698485-17698504 Msa0011740:intron 30.0%
CATTAGAGATAAGGTCTAAA+TGG + chr1_1:17698682-17698701 Msa0011740:intron 30.0%
AAAACTTGATTGCAAGTTAG+AGG + chr1_1:17698732-17698751 Msa0011740:intron 30.0%
AAGTAATTTACTTAGCCATG+TGG - chr1_1:17699062-17699081 None:intergenic 30.0%
! ATTATTGTTTTCATCTGCTC+AGG + chr1_1:17699320-17699339 Msa0011740:intron 30.0%
! AAGTCTGAACCAGTTTTTAT+GGG - chr1_1:17699687-17699706 None:intergenic 30.0%
! AAAGTCTGAACCAGTTTTTA+TGG - chr1_1:17699688-17699707 None:intergenic 30.0%
! TAAAAACTGGTTCAGACTTT+AGG + chr1_1:17699688-17699707 Msa0011740:intron 30.0%
! AAAAACTGGTTCAGACTTTA+GGG + chr1_1:17699689-17699708 Msa0011740:intron 30.0%
TTTCTGATTCTCTGTGTATT+GGG - chr1_1:17699780-17699799 None:intergenic 30.0%
! TTTTCTGATTCTCTGTGTAT+TGG - chr1_1:17699781-17699800 None:intergenic 30.0%
TAACATGTACTTTCCCAATT+GGG + chr1_1:17699829-17699848 Msa0011740:intron 30.0%
! ATGTGTAATGGGAAGTTATA+AGG + chr1_1:17699982-17700001 Msa0011740:intron 30.0%
GTTATAAGGAATAATGAGCA+TGG + chr1_1:17699996-17700015 Msa0011740:intron 30.0%
TATAAGGAATAATGAGCATG+GGG + chr1_1:17699998-17700017 Msa0011740:intron 30.0%
ATTCTTGAATTCAATACGAG+AGG + chr1_1:17700030-17700049 Msa0011740:intron 30.0%
AATTTCTCGCAAATTGAACA+GGG - chr1_1:17700252-17700271 None:intergenic 30.0%
GAGGAATGAACACTAATATA+AGG + chr1_1:17700420-17700439 Msa0011740:intron 30.0%
CACATCCATAAATTTATGCA+TGG - chr1_1:17700608-17700627 None:intergenic 30.0%
CATGCATAAATTTATGGATG+TGG + chr1_1:17700606-17700625 Msa0011740:intron 30.0%
TGATAGTCCTTACATTGATA+TGG - chr1_1:17701045-17701064 None:intergenic 30.0%
TGTTGTGGTTGTTGAAGAAT+GGG - chr1_1:17675378-17675397 None:intergenic 35.0%
TTGTTGTGGTTGTTGAAGAA+TGG - chr1_1:17675379-17675398 None:intergenic 35.0%
TGAAGTGAAGGAACATGAAA+CGG - chr1_1:17675407-17675426 None:intergenic 35.0%
CTTAAGAGATTGTGAAGTGA+AGG - chr1_1:17675419-17675438 None:intergenic 35.0%
CTTCACTTCACAATCTCTTA+AGG + chr1_1:17675417-17675436 Msa0011740:CDS 35.0%
CAGAAGTAGCAAAAGGAAAA+AGG - chr1_1:17675455-17675474 None:intergenic 35.0%
TTACATTAGGGTGAGTGATA+AGG - chr1_1:17675645-17675664 None:intergenic 35.0%
! GTGTTTTCTTGTCTTATGCA+TGG + chr1_1:17675739-17675758 Msa0011740:intron 35.0%
!!! TATGTGTGTGTTTGGTTTTG+CGG + chr1_1:17675847-17675866 Msa0011740:intron 35.0%
TCTAATACCCACTCTCTTAT+TGG + chr1_1:17675942-17675961 Msa0011740:intron 35.0%
ACTCATCAATAGACGTGATT+TGG + chr1_1:17676275-17676294 Msa0011740:intron 35.0%
CTCATCAATAGACGTGATTT+GGG + chr1_1:17676276-17676295 Msa0011740:intron 35.0%
TCATCAATAGACGTGATTTG+GGG + chr1_1:17676277-17676296 Msa0011740:intron 35.0%
TGCGTTTAACGTTTATGATG+CGG + chr1_1:17676357-17676376 Msa0011740:intron 35.0%
! TTTCCTCATTGATTGGGTAA+TGG + chr1_1:17676472-17676491 Msa0011740:intron 35.0%
ACTGATGAAATTAAGAGAGC+AGG - chr1_1:17676871-17676890 None:intergenic 35.0%
TTAACGCAGCAATGCTATAT+TGG + chr1_1:17676967-17676986 Msa0011740:CDS 35.0%
GTGACAGTATATTCTACAAC+AGG - chr1_1:17677308-17677327 None:intergenic 35.0%
AAGATACTTGATACCTCAAG+TGG - chr1_1:17677338-17677357 None:intergenic 35.0%
CTAAAACTGGCAAATCTACA+GGG + chr1_1:17677648-17677667 Msa0011740:CDS 35.0%
! CACTTTTGACCTATTCACTA+AGG - chr1_1:17677714-17677733 None:intergenic 35.0%
CATCATCAGTATCATCATCT+GGG - chr1_1:17677763-17677782 None:intergenic 35.0%
ACATCATCAGTATCATCATC+TGG - chr1_1:17677764-17677783 None:intergenic 35.0%
ACTCTAGATAGCCTCTAATT+TGG + chr1_1:17678091-17678110 Msa0011740:intron 35.0%
ATAGCCTCTAATTTGGTTGT+TGG + chr1_1:17678098-17678117 Msa0011740:intron 35.0%
TGGTTCGACTATTTCAGAAT+AGG + chr1_1:17678118-17678137 Msa0011740:intron 35.0%
GGTTCGACTATTTCAGAATA+GGG + chr1_1:17678119-17678138 Msa0011740:intron 35.0%
CAATCAATACATGTCTGTGT+CGG - chr1_1:17678187-17678206 None:intergenic 35.0%
!! TACATGTGTTGGTGTTGTAT+CGG - chr1_1:17678220-17678239 None:intergenic 35.0%
CGAAGTTGGCTAAATATGTT+AGG + chr1_1:17678325-17678344 Msa0011740:intron 35.0%
CTCTTTGCATAAGAATGACA+TGG - chr1_1:17678460-17678479 None:intergenic 35.0%
CCATTCATTTAATGGAGAGA+TGG - chr1_1:17678483-17678502 None:intergenic 35.0%
CCATCTCTCCATTAAATGAA+TGG + chr1_1:17678480-17678499 Msa0011740:intron 35.0%
TCTAATTCTCTGCATTTGCA+TGG + chr1_1:17678591-17678610 Msa0011740:intron 35.0%
CTTGCTCTTGTCAAATAGAT+TGG + chr1_1:17678631-17678650 Msa0011740:intron 35.0%
CACTCTGAATCAATGGAAAA+GGG + chr1_1:17678715-17678734 Msa0011740:CDS 35.0%
AATGGAAAAGGGTTGCATAT+TGG + chr1_1:17678726-17678745 Msa0011740:CDS 35.0%
TCTTCCACAGTAATGATAAG+TGG - chr1_1:17678981-17679000 None:intergenic 35.0%
GGAAGAAAATGAAACTGTTC+TGG + chr1_1:17678995-17679014 Msa0011740:intron 35.0%
CTCATTCTTAGAATTTGGGT+TGG - chr1_1:17679271-17679290 None:intergenic 35.0%
AGAGATTAAAGGCTATGCAT+TGG - chr1_1:17679324-17679343 None:intergenic 35.0%
!! TTCCTTTTAGAAGACTGGAT+AGG + chr1_1:17679363-17679382 Msa0011740:intron 35.0%
!! TCCTTTTAGAAGACTGGATA+GGG + chr1_1:17679364-17679383 Msa0011740:intron 35.0%
! TTACCCTTTTGATCCATTCA+AGG + chr1_1:17679523-17679542 Msa0011740:intron 35.0%
TGACCTTGAATGGATCAAAA+GGG - chr1_1:17679529-17679548 None:intergenic 35.0%
TTGACCTTGAATGGATCAAA+AGG - chr1_1:17679530-17679549 None:intergenic 35.0%
AGCTGCATGTCTCAAATTAT+TGG + chr1_1:17679682-17679701 Msa0011740:intron 35.0%
GCTGCATGTCTCAAATTATT+GGG + chr1_1:17679683-17679702 Msa0011740:intron 35.0%
TCTTGTATTTGAGTGACCAT+TGG - chr1_1:17679808-17679827 None:intergenic 35.0%
CTCTATCTATGTTGTAACAC+AGG + chr1_1:17680002-17680021 Msa0011740:intron 35.0%
! ACTGAATTGGTTTCAAAGCA+AGG + chr1_1:17680047-17680066 Msa0011740:intron 35.0%
! ATTTGGTTTCACACCTCATT+TGG + chr1_1:17680078-17680097 Msa0011740:intron 35.0%
CATTAACCAACCTGAAACAA+GGG + chr1_1:17680141-17680160 Msa0011740:intron 35.0%
CAGGAGGTTGAGTATATTAT+AGG - chr1_1:17680804-17680823 None:intergenic 35.0%
!! GGACACATCACTTTTGTTAT+TGG + chr1_1:17681166-17681185 Msa0011740:intron 35.0%
! TTTTGCAGCTTCAAGCTTTA+CGG - chr1_1:17681523-17681542 None:intergenic 35.0%
AAAGCTTGAAGCTGCAAAAA+TGG + chr1_1:17681524-17681543 Msa0011740:CDS 35.0%
!! AAAATGGTGGGTTTACCTTA+TGG + chr1_1:17681540-17681559 Msa0011740:CDS 35.0%
AGCATAGATTGGATTCCATA+AGG - chr1_1:17681558-17681577 None:intergenic 35.0%
ATCCAATCTATGCTCAAAGA+AGG + chr1_1:17681564-17681583 Msa0011740:CDS 35.0%
!!! AGCATCGATGTTTTTGAGAA+CGG - chr1_1:17681619-17681638 None:intergenic 35.0%
AATGAGAATGTGAAGTTAGG+GGG - chr1_1:17681698-17681717 None:intergenic 35.0%
!! TACACTTTGTGAGAGTGTTT+GGG - chr1_1:17681952-17681971 None:intergenic 35.0%
!! ATACACTTTGTGAGAGTGTT+TGG - chr1_1:17681953-17681972 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr1_1:17682211-17682230 Msa0011740:intron 35.0%
TTAAGTTAGCCAATCCTAAC+AGG + chr1_1:17682336-17682355 Msa0011740:intron 35.0%
AAAACCAAAATCTTAGCAGC+AGG - chr1_1:17682503-17682522 None:intergenic 35.0%
!!! TGCTGCTAAGATTTTGGTTT+TGG + chr1_1:17682502-17682521 Msa0011740:CDS 35.0%
!!! CTAAGATTTTGGTTTTGGCT+GGG + chr1_1:17682507-17682526 Msa0011740:CDS 35.0%
AAAGCTCAACAAGAGGAAAT+TGG + chr1_1:17682530-17682549 Msa0011740:CDS 35.0%
TATCCACTGATAATCTCACT+GGG - chr1_1:17682635-17682654 None:intergenic 35.0%
ATATCCACTGATAATCTCAC+TGG - chr1_1:17682636-17682655 None:intergenic 35.0%
ATATACCAAAGCCATTGCTA+AGG + chr1_1:17682652-17682671 Msa0011740:CDS 35.0%
AACCTAACAAACCTTAGCAA+TGG - chr1_1:17682666-17682685 None:intergenic 35.0%
TTCGATTGATCCAAAATGGA+TGG + chr1_1:17682697-17682716 Msa0011740:intron 35.0%
!!! AAGACAGCTTTTTTCTCAAG+AGG - chr1_1:17682861-17682880 None:intergenic 35.0%
! TAGATATCTGCTGTTTGACA+AGG + chr1_1:17682975-17682994 Msa0011740:intron 35.0%
AATCCCGTTCTGTACTATAA+GGG + chr1_1:17683069-17683088 Msa0011740:intron 35.0%
TGATCCCTTATAGTACAGAA+CGG - chr1_1:17683076-17683095 None:intergenic 35.0%
!! TTTTCTGTTGGATGGATTTG+GGG + chr1_1:17683243-17683262 Msa0011740:intron 35.0%
!!! CGCTAAACTATTTTGGTTAG+AGG - chr1_1:17683467-17683486 None:intergenic 35.0%
!! AATATTGGACGAACTTGTTG+AGG + chr1_1:17683554-17683573 Msa0011740:CDS 35.0%
!! AAATAACTTGCTCCTTGTCA+CGG - chr1_1:17683602-17683621 None:intergenic 35.0%
CATAGTAAAACTGGGTAATG+AGG - chr1_1:17683706-17683725 None:intergenic 35.0%
! GACCTTTGTTTGGAAAATGT+AGG + chr1_1:17683764-17683783 Msa0011740:intron 35.0%
! TGCCTACATTTTCCAAACAA+AGG - chr1_1:17683769-17683788 None:intergenic 35.0%
TGCGTAATAGTACAGTTGTT+CGG + chr1_1:17683868-17683887 Msa0011740:CDS 35.0%
AAAGAGAATGGAAAAGGCAA+AGG + chr1_1:17683926-17683945 Msa0011740:CDS 35.0%
ATGTATGAAGGCTATACTCT+TGG + chr1_1:17684066-17684085 Msa0011740:intron 35.0%
TAATATCAAGGCTGTACTCT+TGG + chr1_1:17684107-17684126 Msa0011740:intron 35.0%
TGAATAGGTGATTAGGAGTT+AGG + chr1_1:17684248-17684267 Msa0011740:intron 35.0%
GGATGTTATTCTTCAGACTA+TGG + chr1_1:17684353-17684372 Msa0011740:intron 35.0%
TTTGCTTCCAATACTACAGA+TGG + chr1_1:17684382-17684401 Msa0011740:intron 35.0%
TTGCTTCCAATACTACAGAT+GGG + chr1_1:17684383-17684402 Msa0011740:intron 35.0%
AAGTCTTCAATAAGCCAAGT+GGG - chr1_1:17684529-17684548 None:intergenic 35.0%
CTCTTGGTACATTATTTCCA+TGG + chr1_1:17684565-17684584 Msa0011740:intron 35.0%
CTTGGTACATTATTTCCATG+GGG + chr1_1:17684567-17684586 Msa0011740:intron 35.0%
GGTACATACCATTTGTGAAA+GGG + chr1_1:17684588-17684607 Msa0011740:intron 35.0%
TGAAAGGGAATATGTAACAG+AGG + chr1_1:17684603-17684622 Msa0011740:intron 35.0%
CGAATTCCATATACTTTCCT+TGG + chr1_1:17684780-17684799 Msa0011740:intron 35.0%
GTTCCAAGCAAATATTTCCA+AGG - chr1_1:17684800-17684819 None:intergenic 35.0%
! TTTGTCAATGCTCTTTTAGG+TGG + chr1_1:17684931-17684950 Msa0011740:intron 35.0%
ACATCTGCAACTGAAACTAA+AGG + chr1_1:17684977-17684996 Msa0011740:CDS 35.0%
TTTGTGTCTAAACAAGCTAG+AGG + chr1_1:17685121-17685140 Msa0011740:intron 35.0%
TGGAAGAAAGAGAAGACATT+GGG + chr1_1:17685293-17685312 Msa0011740:intron 35.0%
AATAAAAGATCCCCCTCATT+TGG + chr1_1:17685350-17685369 Msa0011740:intron 35.0%
ATAAAAGATCCCCCTCATTT+GGG + chr1_1:17685351-17685370 Msa0011740:intron 35.0%
GGGAACTCAAAAATTGCATT+GGG + chr1_1:17685373-17685392 Msa0011740:intron 35.0%
GGAACTCAAAAATTGCATTG+GGG + chr1_1:17685374-17685393 Msa0011740:intron 35.0%
GAACTCAAAAATTGCATTGG+GGG + chr1_1:17685375-17685394 Msa0011740:intron 35.0%
! CATTGATTGAAATACACTGC+CGG - chr1_1:17685824-17685843 None:intergenic 35.0%
GGCAGTGTATTTCAATCAAT+GGG + chr1_1:17685823-17685842 Msa0011740:intron 35.0%
ATTGATGTTCCATCCTTCTT+TGG - chr1_1:17685875-17685894 None:intergenic 35.0%
ATCTGTAGATTCCAACAGAA+AGG + chr1_1:17685909-17685928 Msa0011740:intron 35.0%
! AACTTAAGACAGGATTGGTA+GGG - chr1_1:17685948-17685967 None:intergenic 35.0%
CTAAAGTTGGAACTTAAGAC+AGG - chr1_1:17685958-17685977 None:intergenic 35.0%
AGGGAAAACCATGAAAACAA+AGG + chr1_1:17686206-17686225 Msa0011740:intron 35.0%
!!! AAGTAGTGCCTTTGTTTTCA+TGG - chr1_1:17686217-17686236 None:intergenic 35.0%
ACTACTTATTAGCGTGGAAA+GGG + chr1_1:17686230-17686249 Msa0011740:intron 35.0%
TGTTGTGGTTGTTGAAGAAT+GGG - chr1_1:17675378-17675397 None:intergenic 35.0%
TTGTTGTGGTTGTTGAAGAA+TGG - chr1_1:17675379-17675398 None:intergenic 35.0%
TGAAGAGAAGGAACATGAAA+CGG - chr1_1:17686385-17686404 None:intergenic 35.0%
CTTAAGAGATTGTGAAGAGA+AGG - chr1_1:17686397-17686416 None:intergenic 35.0%
CTTCTCTTCACAATCTCTTA+AGG + chr1_1:17686395-17686414 Msa0011740:intron 35.0%
CAGAAGTAGCAAAAGGAAAA+AGG - chr1_1:17675455-17675474 None:intergenic 35.0%
TTACATTAGGGTGAGTGATA+AGG - chr1_1:17675645-17675664 None:intergenic 35.0%
CATTGCCAACAAGTAGTAAT+TGG - chr1_1:17686667-17686686 None:intergenic 35.0%
AAACAGACGCATATTATCCT+TGG - chr1_1:17686801-17686820 None:intergenic 35.0%
AAGGATAATATGCGTCTGTT+TGG + chr1_1:17686800-17686819 Msa0011740:intron 35.0%
!! GGCAAAGTACTGAAATTGTT+AGG + chr1_1:17686944-17686963 Msa0011740:intron 35.0%
!! AAGTACTGAAATTGTTAGGC+TGG + chr1_1:17686948-17686967 Msa0011740:intron 35.0%
! GGTTACTTGTCAAATTTTGC+AGG + chr1_1:17687432-17687451 Msa0011740:intron 35.0%
TTAACGCAGCAATGCTATAT+TGG + chr1_1:17676967-17676986 Msa0011740:CDS 35.0%
ACATATAATGCGTTAGGCAT+TGG - chr1_1:17687484-17687503 None:intergenic 35.0%
CCTTCAACATATAATGCGTT+AGG - chr1_1:17687490-17687509 None:intergenic 35.0%
CCTAACGCATTATATGTTGA+AGG + chr1_1:17687487-17687506 Msa0011740:CDS 35.0%
! GTCTTACTCTTACCCTATTT+TGG - chr1_1:17687564-17687583 None:intergenic 35.0%
CATAAACTAGTCAAGGATGA+AGG - chr1_1:17687614-17687633 None:intergenic 35.0%
AAGATACTTGATACCTCAAG+TGG - chr1_1:17677338-17677357 None:intergenic 35.0%
GCTCAAATCGTCATACAATT+TGG + chr1_1:17687929-17687948 Msa0011740:intron 35.0%
TTCGCATTATCTACAGTGTT+AGG - chr1_1:17688090-17688109 None:intergenic 35.0%
!! AAGTGGATTGATCCTAAAAC+TGG + chr1_1:17688137-17688156 Msa0011740:CDS 35.0%
CTAAAACTGGCAAATCTACA+GGG + chr1_1:17677648-17677667 Msa0011740:CDS 35.0%
!! CAGCTCTAAGTAAAGAATCA+GGG - chr1_1:17688187-17688206 None:intergenic 35.0%
!! ACAGCTCTAAGTAAAGAATC+AGG - chr1_1:17688188-17688207 None:intergenic 35.0%
! CACTTTTGACCTATTCACTA+AGG - chr1_1:17677714-17677733 None:intergenic 35.0%
CATCATCAGTATCATCATCT+GGG - chr1_1:17677763-17677782 None:intergenic 35.0%
ACATCATCAGTATCATCATC+TGG - chr1_1:17677764-17677783 None:intergenic 35.0%
! GTAATTGCTACATCTGAAGT+AGG + chr1_1:17688809-17688828 Msa0011740:intron 35.0%
CCATTCATTTAATGGAGAGA+TGG - chr1_1:17678483-17678502 None:intergenic 35.0%
CCATCTCTCCATTAAATGAA+TGG + chr1_1:17678480-17678499 Msa0011740:intron 35.0%
CTTGCTCTTGTCAAATAGAT+TGG + chr1_1:17678631-17678650 Msa0011740:intron 35.0%
CACTCTGAATCAATGGAAAA+GGG + chr1_1:17678715-17678734 Msa0011740:CDS 35.0%
AATGGAAAAGGGTTGCATAT+TGG + chr1_1:17678726-17678745 Msa0011740:CDS 35.0%
TCTTCCACAGTAATGATAAG+TGG - chr1_1:17678981-17679000 None:intergenic 35.0%
GGAAGAAAATGAAACTGTTC+TGG + chr1_1:17678995-17679014 Msa0011740:intron 35.0%
!! TACAAAACTGACTTGTAAGG+CGG - chr1_1:17689764-17689783 None:intergenic 35.0%
CTCATTCTTAGAATTTGGGT+TGG - chr1_1:17679271-17679290 None:intergenic 35.0%
AGAGATTAAAGGCTATGCAT+TGG - chr1_1:17679324-17679343 None:intergenic 35.0%
!! TTCCTTTTAGAAGATTGGAC+AGG + chr1_1:17689890-17689909 Msa0011740:intron 35.0%
!! TCCTTTTAGAAGATTGGACA+GGG + chr1_1:17689891-17689910 Msa0011740:intron 35.0%
! TTACCCTTTTGATCCATTCA+AGG + chr1_1:17679523-17679542 Msa0011740:intron 35.0%
TGACCTTGAATGGATCAAAA+GGG - chr1_1:17679529-17679548 None:intergenic 35.0%
TTGACCTTGAATGGATCAAA+AGG - chr1_1:17679530-17679549 None:intergenic 35.0%
AGCTGCATGTCTCAAATTAT+TGG + chr1_1:17679682-17679701 Msa0011740:intron 35.0%
GCTGCATGTCTCAAATTATT+GGG + chr1_1:17679683-17679702 Msa0011740:intron 35.0%
TCTTGTATTTGAGTGACCAT+TGG - chr1_1:17679808-17679827 None:intergenic 35.0%
CTCTATCTATGTTGTAACAC+AGG + chr1_1:17680002-17680021 Msa0011740:intron 35.0%
! ACTGAATTGGTTTCAAAGCA+AGG + chr1_1:17680047-17680066 Msa0011740:intron 35.0%
! ATTTGGTTTCACACCTCATT+TGG + chr1_1:17680078-17680097 Msa0011740:intron 35.0%
CATTAACCAACCTGAAACAA+GGG + chr1_1:17680141-17680160 Msa0011740:intron 35.0%
! ATTTGTTTGGAGGGAAGTTT+TGG - chr1_1:17691278-17691297 None:intergenic 35.0%
CAGGAGGTTGAGTATATTAT+AGG - chr1_1:17680804-17680823 None:intergenic 35.0%
!! GGACACATCACTTTTGTTAT+TGG + chr1_1:17681166-17681185 Msa0011740:intron 35.0%
! TTTTGCAGCTTCAAGCTTTA+CGG - chr1_1:17681523-17681542 None:intergenic 35.0%
AAAGCTTGAAGCTGCAAAAA+TGG + chr1_1:17681524-17681543 Msa0011740:CDS 35.0%
!! AAAATGGTGGGTTTACCTTA+TGG + chr1_1:17681540-17681559 Msa0011740:CDS 35.0%
AGCATAGATTGGATTCCATA+AGG - chr1_1:17681558-17681577 None:intergenic 35.0%
ATCCAATCTATGCTCAAAGA+AGG + chr1_1:17681564-17681583 Msa0011740:CDS 35.0%
!!! AGCATCGATGTTTTTGAGAA+CGG - chr1_1:17681619-17681638 None:intergenic 35.0%
AATGAGAATGTGAAGTTAGG+GGG - chr1_1:17681698-17681717 None:intergenic 35.0%
!! TACACTTTGTGAGAGTGTTT+GGG - chr1_1:17681952-17681971 None:intergenic 35.0%
!! ATACACTTTGTGAGAGTGTT+TGG - chr1_1:17681953-17681972 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr1_1:17682211-17682230 Msa0011740:intron 35.0%
TTAAGTTAGCCAATCCTAAC+AGG + chr1_1:17682336-17682355 Msa0011740:intron 35.0%
AAAACCAAAATCTTAGCAGC+AGG - chr1_1:17682503-17682522 None:intergenic 35.0%
!!! TGCTGCTAAGATTTTGGTTT+TGG + chr1_1:17682502-17682521 Msa0011740:CDS 35.0%
!!! CTAAGATTTTGGTTTTGGCT+GGG + chr1_1:17682507-17682526 Msa0011740:CDS 35.0%
AAAGCTCAACAAGAGGAAAT+TGG + chr1_1:17682530-17682549 Msa0011740:CDS 35.0%
TATCCACTGATAATCTCACT+GGG - chr1_1:17682635-17682654 None:intergenic 35.0%
ATATCCACTGATAATCTCAC+TGG - chr1_1:17682636-17682655 None:intergenic 35.0%
ATATACCAAAGCCATTGCTA+AGG + chr1_1:17682652-17682671 Msa0011740:CDS 35.0%
AACCTAACAAACCTTAGCAA+TGG - chr1_1:17682666-17682685 None:intergenic 35.0%
!!! AAGACAGCTTTTTTCTCAAG+AGG - chr1_1:17682861-17682880 None:intergenic 35.0%
! TAGATATCTGCTGTTTGACA+AGG + chr1_1:17682975-17682994 Msa0011740:intron 35.0%
AATCCCGTTCTGTACTATAA+GGG + chr1_1:17683069-17683088 Msa0011740:intron 35.0%
TGATCCCTTATAGTACAGAA+CGG - chr1_1:17683076-17683095 None:intergenic 35.0%
!! TTTTCTGTTGGATGGATTTG+GGG + chr1_1:17683243-17683262 Msa0011740:intron 35.0%
!!! CGCTAAACTATTTTGGTTAG+AGG - chr1_1:17683467-17683486 None:intergenic 35.0%
!! AATATTGGACGAACTTGTTG+AGG + chr1_1:17683554-17683573 Msa0011740:CDS 35.0%
!! AAATAACTTGCTCCTTGTCA+CGG - chr1_1:17683602-17683621 None:intergenic 35.0%
CATAGTAAAACTGGGTAATG+AGG - chr1_1:17683706-17683725 None:intergenic 35.0%
! GACCTTTGTTTGGAAAATGT+AGG + chr1_1:17683764-17683783 Msa0011740:intron 35.0%
! TGCCTACATTTTCCAAACAA+AGG - chr1_1:17683769-17683788 None:intergenic 35.0%
TGCGTAATAGTACAGTTGTT+CGG + chr1_1:17683868-17683887 Msa0011740:CDS 35.0%
AAAGAGAATGGAAAAGGCAA+AGG + chr1_1:17683926-17683945 Msa0011740:CDS 35.0%
ATGTATGAAGGCTATACTCT+TGG + chr1_1:17684066-17684085 Msa0011740:intron 35.0%
TAATATCAAGGCTGTACTCT+TGG + chr1_1:17684107-17684126 Msa0011740:intron 35.0%
GATGGAACAACTGAATGAAT+AGG + chr1_1:17684233-17684252 Msa0011740:intron 35.0%
TGAATAGGTGATTAGGAGTT+AGG + chr1_1:17684248-17684267 Msa0011740:intron 35.0%
GGATGTTATTCTTCAGACTA+TGG + chr1_1:17684353-17684372 Msa0011740:intron 35.0%
TTTGCTTCCAATACTACAGA+TGG + chr1_1:17684382-17684401 Msa0011740:intron 35.0%
TTGCTTCCAATACTACAGAT+GGG + chr1_1:17684383-17684402 Msa0011740:intron 35.0%
AAGTCTTCAATAAGCCAAGT+GGG - chr1_1:17684529-17684548 None:intergenic 35.0%
CTCTTGGTACATTATTTCCA+TGG + chr1_1:17684565-17684584 Msa0011740:intron 35.0%
CTTGGTACATTATTTCCATG+GGG + chr1_1:17684567-17684586 Msa0011740:intron 35.0%
GGTACATACCATTTGTGAAA+GGG + chr1_1:17684588-17684607 Msa0011740:intron 35.0%
GGGAATATGTAACAGAAGTA+AGG + chr1_1:17695137-17695156 Msa0011740:intron 35.0%
TAACAGAAGTAAGGAATGCT+TGG + chr1_1:17695146-17695165 Msa0011740:intron 35.0%
CGAATTCCATATACTTTCCT+TGG + chr1_1:17684780-17684799 Msa0011740:intron 35.0%
GTTCCAAGCAAATATTTCCA+AGG - chr1_1:17684800-17684819 None:intergenic 35.0%
! TTTGTCAATGCTCTTTTAGG+TGG + chr1_1:17684931-17684950 Msa0011740:intron 35.0%
ACATCTGCAACTGAAACTAA+AGG + chr1_1:17684977-17684996 Msa0011740:CDS 35.0%
TTTGTGTCTAAACAAGCTAG+AGG + chr1_1:17685121-17685140 Msa0011740:intron 35.0%
TGGAAGAAAGAGAAGACATT+GGG + chr1_1:17685293-17685312 Msa0011740:intron 35.0%
AATAAAAGATCCCCCTCATT+TGG + chr1_1:17685350-17685369 Msa0011740:intron 35.0%
ATAAAAGATCCCCCTCATTT+GGG + chr1_1:17685351-17685370 Msa0011740:intron 35.0%
GGGAACTCAAAAATTGCATT+GGG + chr1_1:17685373-17685392 Msa0011740:intron 35.0%
GGAACTCAAAAATTGCATTG+GGG + chr1_1:17685374-17685393 Msa0011740:intron 35.0%
GAACTCAAAAATTGCATTGG+GGG + chr1_1:17685375-17685394 Msa0011740:intron 35.0%
! CATTGATTGAAATACACTGC+CGG - chr1_1:17685824-17685843 None:intergenic 35.0%
GGCAGTGTATTTCAATCAAT+GGG + chr1_1:17685823-17685842 Msa0011740:intron 35.0%
ATTGATGTTCCATCCTTCTT+TGG - chr1_1:17685875-17685894 None:intergenic 35.0%
ATCTGTAGATTCCAACAGAA+AGG + chr1_1:17685909-17685928 Msa0011740:intron 35.0%
! AACTTAAGACAGGATTGGTA+GGG - chr1_1:17685948-17685967 None:intergenic 35.0%
CTAAAGTTGGAACTTAAGAC+AGG - chr1_1:17685958-17685977 None:intergenic 35.0%
GAACAACAAAAGGAAAATCC+CGG - chr1_1:17696947-17696966 None:intergenic 35.0%
TAAAGTAGAAGAGCTCATCA+AGG + chr1_1:17697082-17697101 Msa0011740:CDS 35.0%
ATGCTATGAATCTACCTATG+TGG + chr1_1:17697292-17697311 Msa0011740:intron 35.0%
AATTCATGCTTGTAGGCTTA+TGG + chr1_1:17697329-17697348 Msa0011740:intron 35.0%
CAACATATCCAAGATCATCT+GGG - chr1_1:17697521-17697540 None:intergenic 35.0%
TCAACATATCCAAGATCATC+TGG - chr1_1:17697522-17697541 None:intergenic 35.0%
!! TGTTGATTCTGTTTCAGTTG+AGG + chr1_1:17697536-17697555 Msa0011740:CDS 35.0%
TCTGTTTCAGTTGAGGAAAT+TGG + chr1_1:17697543-17697562 Msa0011740:CDS 35.0%
! GTTGGTTTCTGTTATGTTCT+TGG + chr1_1:17697589-17697608 Msa0011740:intron 35.0%
ACCTGCATCATTAAACAAGA+GGG - chr1_1:17697681-17697700 None:intergenic 35.0%
!! ATTGAAAGAGCAGTTGATGA+TGG + chr1_1:17697783-17697802 Msa0011740:CDS 35.0%
GGGTTAAGATACAATCAACT+TGG - chr1_1:17697857-17697876 None:intergenic 35.0%
CTATTTATCAGACTATGTGC+AGG + chr1_1:17698008-17698027 Msa0011740:intron 35.0%
TGAAATTGAGTTAGCCAAGA+GGG + chr1_1:17698063-17698082 Msa0011740:intron 35.0%
! TTTTATTGAGAGTCCCACAT+TGG + chr1_1:17698135-17698154 Msa0011740:intron 35.0%
ACCACATCATTAACCAATGT+GGG - chr1_1:17698151-17698170 None:intergenic 35.0%
GTGGTCTGAATATTGTTTAG+GGG + chr1_1:17698166-17698185 Msa0011740:intron 35.0%
TGGTCTGAATATTGTTTAGG+GGG + chr1_1:17698167-17698186 Msa0011740:intron 35.0%
!!! CAAACCAACTTTTAAGGTGA+GGG - chr1_1:17698196-17698215 None:intergenic 35.0%
!!! ACAAACCAACTTTTAAGGTG+AGG - chr1_1:17698197-17698216 None:intergenic 35.0%
TATATGTGTCCCATATTCGT+TGG + chr1_1:17698260-17698279 Msa0011740:intron 35.0%
ATATGTGTCCCATATTCGTT+GGG + chr1_1:17698261-17698280 Msa0011740:intron 35.0%
TCAGATGTATGTTCAGTCTT+CGG + chr1_1:17698315-17698334 Msa0011740:intron 35.0%
GCCTCAATAGTGTTTATTAG+TGG + chr1_1:17698484-17698503 Msa0011740:intron 35.0%
CCCACTAATAAACACTATTG+AGG - chr1_1:17698488-17698507 None:intergenic 35.0%
AAAATCCTCACCGAACAAAT+AGG + chr1_1:17698510-17698529 Msa0011740:intron 35.0%
CCACACAAAACCTATTTGTT+CGG - chr1_1:17698523-17698542 None:intergenic 35.0%
AAGTCCAAGAATACTGAGAA+CGG + chr1_1:17698624-17698643 Msa0011740:intron 35.0%
TGAGATGATTCCTAGAACAT+TGG + chr1_1:17698900-17698919 Msa0011740:CDS 35.0%
!! CACTAAAGTTGGCATTGATT+TGG + chr1_1:17698990-17699009 Msa0011740:CDS 35.0%
CATCATTTGCCTTAAGTAAG+GGG - chr1_1:17699143-17699162 None:intergenic 35.0%
CCATCATTTGCCTTAAGTAA+GGG - chr1_1:17699144-17699163 None:intergenic 35.0%
TCCATCATTTGCCTTAAGTA+AGG - chr1_1:17699145-17699164 None:intergenic 35.0%
CTAAAAAACAGCTGATTACC+TGG - chr1_1:17699399-17699418 None:intergenic 35.0%
! ATGTGTTCAATCTTTAGGGA+GGG - chr1_1:17699479-17699498 None:intergenic 35.0%
! CACATGATTTTGTCTTCCTA+AGG + chr1_1:17699494-17699513 Msa0011740:intron 35.0%
TTTATCCAGGTGTAATCCTT+AGG - chr1_1:17699513-17699532 None:intergenic 35.0%
GGTACAAAAAATGCAATGTG+TGG - chr1_1:17699645-17699664 None:intergenic 35.0%
TTCTCTTATAGCTCAAAGCA+AGG - chr1_1:17699757-17699776 None:intergenic 35.0%
! AGTTTTCTGATTCTGTCTAC+TGG - chr1_1:17699807-17699826 None:intergenic 35.0%
CTAACATGTACTTTCCCAAT+TGG + chr1_1:17699828-17699847 Msa0011740:intron 35.0%
GATATTCGTCGATACTAGTA+AGG + chr1_1:17699875-17699894 Msa0011740:intron 35.0%
AGAGAGGGATAATGTGTAAT+GGG + chr1_1:17699971-17699990 Msa0011740:intron 35.0%
ATCACCAAAAGTCCATTGAT+TGG + chr1_1:17700053-17700072 Msa0011740:intron 35.0%
! AAAAGTCCATTGATTGGTGA+GGG + chr1_1:17700059-17700078 Msa0011740:intron 35.0%
GAACAACACAAAAGAGTAGA+AGG - chr1_1:17700188-17700207 None:intergenic 35.0%
GAATTTCTCGCAAATTGAAC+AGG - chr1_1:17700253-17700272 None:intergenic 35.0%
TCAATTTGCGAGAAATTCTC+AGG + chr1_1:17700255-17700274 Msa0011740:intron 35.0%
CAATTTGCGAGAAATTCTCA+GGG + chr1_1:17700256-17700275 Msa0011740:intron 35.0%
TCAGATTATTATGGCGAAAC+CGG + chr1_1:17700642-17700661 Msa0011740:intron 35.0%
TAAAAGAAAACTAGATGCCC+AGG - chr1_1:17700792-17700811 None:intergenic 35.0%
GCTATCTCCATATCAATGTA+AGG + chr1_1:17701035-17701054 Msa0011740:three_prime_UTR 35.0%
CTATCATTTATCAAGCACAG+TGG + chr1_1:17701059-17701078 Msa0011740:three_prime_UTR 35.0%
CATTACAGTACAGTGAAGGA+CGG + chr1_1:17675251-17675270 Msa0011740:five_prime_UTR 40.0%
TATCGGAAGATTGAGAGTGA+AGG - chr1_1:17675338-17675357 None:intergenic 40.0%
GTAGAGAAAGAAGGGGTTAT+CGG - chr1_1:17675355-17675374 None:intergenic 40.0%
AGAATGGGGTAGAGAAAGAA+GGG - chr1_1:17675363-17675382 None:intergenic 40.0%
AAGAATGGGGTAGAGAAAGA+AGG - chr1_1:17675364-17675383 None:intergenic 40.0%
GTTGTGGTTGTTGAAGAATG+GGG - chr1_1:17675377-17675396 None:intergenic 40.0%
!! ATGAAACGGTTGGTTTGTTG+TGG - chr1_1:17675393-17675412 None:intergenic 40.0%
TTGTCTGCAGAAGTAGCAAA+AGG - chr1_1:17675462-17675481 None:intergenic 40.0%
TATGTCTCACCACTTTGTGT+AGG - chr1_1:17676004-17676023 None:intergenic 40.0%
ATCACGTCTATTGATGAGTC+CGG - chr1_1:17676274-17676293 None:intergenic 40.0%
! CATCAATAGACGTGATTTGG+GGG + chr1_1:17676278-17676297 Msa0011740:intron 40.0%
! GGGGATGGAATTGATTTAGA+TGG + chr1_1:17676297-17676316 Msa0011740:intron 40.0%
AACAGGCAAAATCTGGTGTT+TGG - chr1_1:17676330-17676349 None:intergenic 40.0%
! TGTTTGGAACAGGCAAAATC+TGG - chr1_1:17676337-17676356 None:intergenic 40.0%
! GTTAAACGCATGTTTGGAAC+AGG - chr1_1:17676347-17676366 None:intergenic 40.0%
TCTGAACACTCGTATGATAG+TGG - chr1_1:17676408-17676427 None:intergenic 40.0%
TGTCCATTACCCAATCAATG+AGG - chr1_1:17676478-17676497 None:intergenic 40.0%
GGTTGTCTTGAATGATAAGG+TGG + chr1_1:17676895-17676914 Msa0011740:intron 40.0%
CTCTTGACAGATTTGCAGAA+GGG + chr1_1:17677024-17677043 Msa0011740:CDS 40.0%
!! ATTTTGGTGAACAGGCTGTA+AGG - chr1_1:17677057-17677076 None:intergenic 40.0%
TACAGCCTGTTCACCAAAAT+AGG + chr1_1:17677057-17677076 Msa0011740:CDS 40.0%
ACAGCCTGTTCACCAAAATA+GGG + chr1_1:17677058-17677077 Msa0011740:CDS 40.0%
!!! CATACCCTATTTTGGTGAAC+AGG - chr1_1:17677065-17677084 None:intergenic 40.0%
CATAAACTAGTCAAGGATGC+AGG - chr1_1:17677117-17677136 None:intergenic 40.0%
GTTGGAATAGTTCTTGATGC+TGG + chr1_1:17677215-17677234 Msa0011740:CDS 40.0%
AGTTCTTGATGCTGGTATAG+AGG + chr1_1:17677223-17677242 Msa0011740:CDS 40.0%
!! AAGTGGGTTGATCCTAAAAC+TGG + chr1_1:17677635-17677654 Msa0011740:CDS 40.0%
! CCTGTAGATTTGCCAGTTTT+AGG - chr1_1:17677650-17677669 None:intergenic 40.0%
CCTAAAACTGGCAAATCTAC+AGG + chr1_1:17677647-17677666 Msa0011740:CDS 40.0%
! TGATGTTGATGAATATCGGC+AGG + chr1_1:17677778-17677797 Msa0011740:CDS 40.0%
! GATGTTGATGAATATCGGCA+GGG + chr1_1:17677779-17677798 Msa0011740:CDS 40.0%
TATAAGCCATCTAGTGGTGA+AGG + chr1_1:17677974-17677993 Msa0011740:CDS 40.0%
!! CTGATTTGGGACTTAGAGAT+AGG - chr1_1:17678052-17678071 None:intergenic 40.0%
CTAGAGTTTACTAACCTCCT+CGG - chr1_1:17678078-17678097 None:intergenic 40.0%
CGAACCAACAACCAAATTAG+AGG - chr1_1:17678105-17678124 None:intergenic 40.0%
AGAATAGGGTTATGTAGCAC+AGG + chr1_1:17678133-17678152 Msa0011740:intron 40.0%
TACATGTCTGTGTCGGATAT+TGG - chr1_1:17678180-17678199 None:intergenic 40.0%
AGTATTGTGGAGCTTTACTG+AGG - chr1_1:17678687-17678706 None:intergenic 40.0%
CAGTAAAGCTCCACAATACT+TGG + chr1_1:17678687-17678706 Msa0011740:CDS 40.0%
GCACTCTGAATCAATGGAAA+AGG + chr1_1:17678714-17678733 Msa0011740:CDS 40.0%
TTGCATATTGGCAAGTGATG+TGG + chr1_1:17678738-17678757 Msa0011740:CDS 40.0%
AGTAATGATAAGTGGCTGCA+AGG - chr1_1:17678973-17678992 None:intergenic 40.0%
GATGACACTGCAGATAAACT+TGG + chr1_1:17679017-17679036 Msa0011740:intron 40.0%
CACTGCAGATAAACTTGGTT+TGG + chr1_1:17679022-17679041 Msa0011740:intron 40.0%
CAATGTGTTCGATGTTTGTG+CGG - chr1_1:17679170-17679189 None:intergenic 40.0%
TCGAACACATTGAATGAGAG+TGG + chr1_1:17679178-17679197 Msa0011740:intron 40.0%
CGAACACATTGAATGAGAGT+GGG + chr1_1:17679179-17679198 Msa0011740:intron 40.0%
!! CAAAACTGATTTGTAAGGCG+AGG - chr1_1:17679232-17679251 None:intergenic 40.0%
ACCCTATCCAGTCTTCTAAA+AGG - chr1_1:17679368-17679387 None:intergenic 40.0%
TAATAGCTGCTCACAAAGCA+GGG + chr1_1:17679718-17679737 Msa0011740:CDS 40.0%
ACTTCATTTATGCCTGCCAA+TGG + chr1_1:17679789-17679808 Msa0011740:CDS 40.0%
TCTATGTTGTAACACAGGGT+AGG + chr1_1:17680007-17680026 Msa0011740:intron 40.0%
!! CCTTGTTTCAGGTTGGTTAA+TGG - chr1_1:17680143-17680162 None:intergenic 40.0%
CCATTAACCAACCTGAAACA+AGG + chr1_1:17680140-17680159 Msa0011740:intron 40.0%
! TGAAAGCTTTCCCTTGTTTC+AGG - chr1_1:17680154-17680173 None:intergenic 40.0%
TGAAACAAGGGAAAGCTTTC+AGG + chr1_1:17680153-17680172 Msa0011740:intron 40.0%
!! GAGGGTATCATCAAGTGTAA+TGG + chr1_1:17680179-17680198 Msa0011740:intron 40.0%
GAGAGTTGGGTGTGAAAATT+TGG - chr1_1:17680530-17680549 None:intergenic 40.0%
!!! AGATAGGGGTTTTGAGAGTT+GGG - chr1_1:17680543-17680562 None:intergenic 40.0%
!!! GGTTTTGGAGATGAAGTCTT+TGG + chr1_1:17680582-17680601 Msa0011740:intron 40.0%
! ATTTGTTTGGAGGGAGGTTT+TGG - chr1_1:17680749-17680768 None:intergenic 40.0%
! TTGAAGATTTGTTTGGAGGG+AGG - chr1_1:17680755-17680774 None:intergenic 40.0%
TCTCTTCATTTCGTGGGTTT+AGG + chr1_1:17681433-17681452 Msa0011740:intron 40.0%
CTTGAAGCTGCAAAAATGGT+GGG + chr1_1:17681528-17681547 Msa0011740:CDS 40.0%
GACCTTCTTTGAGCATAGAT+TGG - chr1_1:17681569-17681588 None:intergenic 40.0%
ATGAGAATGTGAAGTTAGGG+GGG - chr1_1:17681697-17681716 None:intergenic 40.0%
AAACAAACTAGGGACCTGTT+AGG - chr1_1:17682353-17682372 None:intergenic 40.0%
! ACATCCTGCTGCTAAGATTT+TGG + chr1_1:17682496-17682515 Msa0011740:CDS 40.0%
!!! GCTAAGATTTTGGTTTTGGC+TGG + chr1_1:17682506-17682525 Msa0011740:CDS 40.0%
CAACAAGAGGAAATTGGTGA+TGG + chr1_1:17682536-17682555 Msa0011740:CDS 40.0%
! ATGGTGCTGAAGAGCTTATT+AGG + chr1_1:17682597-17682616 Msa0011740:CDS 40.0%
TGCTGAAGAGCTTATTAGGA+TGG + chr1_1:17682601-17682620 Msa0011740:CDS 40.0%
GCTGAAGAGCTTATTAGGAT+GGG + chr1_1:17682602-17682621 Msa0011740:CDS 40.0%
ACAAACCTTAGCAATGGCTT+TGG - chr1_1:17682660-17682679 None:intergenic 40.0%
! AGCCATTGCTAAGGTTTGTT+AGG + chr1_1:17682661-17682680 Msa0011740:intron 40.0%
! AAAAGCTGTCTTTTTGCGAG+AGG + chr1_1:17682869-17682888 Msa0011740:intron 40.0%
!! AGCGTAGCAGAGTTTTAACA+AGG - chr1_1:17682937-17682956 None:intergenic 40.0%
CAATCCCGTTCTGTACTATA+AGG + chr1_1:17683068-17683087 Msa0011740:intron 40.0%
GATCCCTTATAGTACAGAAC+GGG - chr1_1:17683075-17683094 None:intergenic 40.0%
CAGAGAGTCAGAGAAAATTG+AGG - chr1_1:17683099-17683118 None:intergenic 40.0%
! CAATTTTCTCTGACTCTCTG+AGG + chr1_1:17683099-17683118 Msa0011740:intron 40.0%
TTGGTTAGAGGAGTTTGCAA+GGG - chr1_1:17683455-17683474 None:intergenic 40.0%
TTTGGTTAGAGGAGTTTGCA+AGG - chr1_1:17683456-17683475 None:intergenic 40.0%
TTGACATTCCGACCTTTGTT+TGG + chr1_1:17683754-17683773 Msa0011740:intron 40.0%
GCGTAATAGTACAGTTGTTC+GGG + chr1_1:17683869-17683888 Msa0011740:CDS 40.0%
CGTAATAGTACAGTTGTTCG+GGG + chr1_1:17683870-17683889 Msa0011740:CDS 40.0%
!! GTTCTGAGAAATGATGCTGT+TGG + chr1_1:17683897-17683916 Msa0011740:CDS 40.0%
!!! TGAGACTTTTAGGGTTTCAC+CGG + chr1_1:17683966-17683985 Msa0011740:intron 40.0%
AGATAGCCCATCTGTAGTAT+TGG - chr1_1:17684392-17684411 None:intergenic 40.0%
AGTCTTCAATAAGCCAAGTG+GGG - chr1_1:17684528-17684547 None:intergenic 40.0%
GAAGTCTTCAATAAGCCAAG+TGG - chr1_1:17684530-17684549 None:intergenic 40.0%
GGGTACATACCATTTGTGAA+AGG + chr1_1:17684587-17684606 Msa0011740:intron 40.0%
GGGAATATGTAACAGAGGTA+AGG + chr1_1:17684608-17684627 Msa0011740:intron 40.0%
TAACAGAGGTAAGGAATGCT+TGG + chr1_1:17684617-17684636 Msa0011740:intron 40.0%
GGAAGACATGACAACTAGTA+TGG - chr1_1:17684682-17684701 None:intergenic 40.0%
TGCAATAGCATATCATGGTG+AGG - chr1_1:17684880-17684899 None:intergenic 40.0%
TCATACTGTGTCTTGTACTG+AGG + chr1_1:17684905-17684924 Msa0011740:intron 40.0%
TCTCATACATTCTGCTGAAC+AGG + chr1_1:17685006-17685025 Msa0011740:CDS 40.0%
! ATTTCCCTTTTATGGGGAGT+GGG - chr1_1:17685154-17685173 None:intergenic 40.0%
! AATTTCCCTTTTATGGGGAG+TGG - chr1_1:17685155-17685174 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr1_1:17685227-17685246 Msa0011740:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + chr1_1:17685264-17685283 Msa0011740:intron 40.0%
GTGGAAGAAAGAGAAGACAT+TGG + chr1_1:17685292-17685311 Msa0011740:intron 40.0%
AAGAAAGAGAAGACATTGGG+AGG + chr1_1:17685296-17685315 Msa0011740:intron 40.0%
TAAAAGATCCCCCTCATTTG+GGG + chr1_1:17685352-17685371 Msa0011740:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr1_1:17685365-17685384 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr1_1:17685366-17685385 None:intergenic 40.0%
GGGGAACTCAAAAATTGCAT+TGG + chr1_1:17685372-17685391 Msa0011740:intron 40.0%
TCAAAAATTGCATTGGGGGA+GGG + chr1_1:17685379-17685398 Msa0011740:intron 40.0%
CGGCAGTGTATTTCAATCAA+TGG + chr1_1:17685822-17685841 Msa0011740:intron 40.0%
AACTACAAGCACACCAAAGA+AGG + chr1_1:17685859-17685878 Msa0011740:intron 40.0%
! GAACTTAAGACAGGATTGGT+AGG - chr1_1:17685949-17685968 None:intergenic 40.0%
GTTGGAACTTAAGACAGGAT+TGG - chr1_1:17685953-17685972 None:intergenic 40.0%
GCCTGTGATATCAATGATGA+CGG + chr1_1:17686001-17686020 Msa0011740:intron 40.0%
TCCGTCATCATTGATATCAC+AGG - chr1_1:17686005-17686024 None:intergenic 40.0%
!! GAAAAGTGTTTAGAAGGGCA+GGG + chr1_1:17686057-17686076 Msa0011740:intron 40.0%
!! AAAAGTGTTTAGAAGGGCAG+GGG + chr1_1:17686058-17686077 Msa0011740:intron 40.0%
AGGGGAATCAAAGCTAGTAT+TGG + chr1_1:17686166-17686185 Msa0011740:intron 40.0%
! GGAATCAAAGCTAGTATTGG+TGG + chr1_1:17686169-17686188 Msa0011740:intron 40.0%
!! AAAGGCACTACTTATTAGCG+TGG + chr1_1:17686224-17686243 Msa0011740:intron 40.0%
CACTACTTATTAGCGTGGAA+AGG + chr1_1:17686229-17686248 Msa0011740:intron 40.0%
ATGCAATGAGACAACCTTCA+TGG - chr1_1:17686260-17686279 None:intergenic 40.0%
TATCGGAAGATTGAGAGTGA+AGG - chr1_1:17675338-17675357 None:intergenic 40.0%
GTAGAGAAAGAAGGGGTTAT+CGG - chr1_1:17675355-17675374 None:intergenic 40.0%
AGAATGGGGTAGAGAAAGAA+GGG - chr1_1:17675363-17675382 None:intergenic 40.0%
AAGAATGGGGTAGAGAAAGA+AGG - chr1_1:17675364-17675383 None:intergenic 40.0%
GTTGTGGTTGTTGAAGAATG+GGG - chr1_1:17675377-17675396 None:intergenic 40.0%
!! ATGAAACGGTTGGTTTGTTG+TGG - chr1_1:17675393-17675412 None:intergenic 40.0%
TTGTCTGCAGAAGTAGCAAA+AGG - chr1_1:17675462-17675481 None:intergenic 40.0%
TCCTCAAGTCTCAGCTTAAT+TGG + chr1_1:17686923-17686942 Msa0011740:intron 40.0%
AACCATTGAAACTCACACAC+AGG - chr1_1:17687011-17687030 None:intergenic 40.0%
ACATTTAGCACTATTGGGGT+CGG - chr1_1:17687338-17687357 None:intergenic 40.0%
GGGAACATTTAGCACTATTG+GGG - chr1_1:17687342-17687361 None:intergenic 40.0%
CGGGAACATTTAGCACTATT+GGG - chr1_1:17687343-17687362 None:intergenic 40.0%
!! ATTTTGGTGAACAGGCTGTA+AGG - chr1_1:17677057-17677076 None:intergenic 40.0%
TACAGCCTGTTCACCAAAAT+AGG + chr1_1:17677057-17677076 Msa0011740:CDS 40.0%
ACAGCCTGTTCACCAAAATA+GGG + chr1_1:17677058-17677077 Msa0011740:CDS 40.0%
!!! CTTACCCTATTTTGGTGAAC+AGG - chr1_1:17687556-17687575 None:intergenic 40.0%
GTTGGAATAGTTCTTGATGC+TGG + chr1_1:17677215-17677234 Msa0011740:CDS 40.0%
AGTTCTTGATGCTGGTATAG+AGG + chr1_1:17677223-17677242 Msa0011740:CDS 40.0%
CTGGTATAGAGGAAGAACTT+CGG + chr1_1:17687731-17687750 Msa0011740:CDS 40.0%
GTGACAGTATATTCTGCAAC+AGG - chr1_1:17687805-17687824 None:intergenic 40.0%
! CCTGTAGATTTGCCAGTTTT+AGG - chr1_1:17677650-17677669 None:intergenic 40.0%
CCTAAAACTGGCAAATCTAC+AGG + chr1_1:17677647-17677666 Msa0011740:CDS 40.0%
! TGATGTTGATGAATATCGGC+AGG + chr1_1:17677778-17677797 Msa0011740:CDS 40.0%
! GATGTTGATGAATATCGGCA+GGG + chr1_1:17677779-17677798 Msa0011740:CDS 40.0%
TATAAGCCATCTAGTGGTGA+AGG + chr1_1:17677974-17677993 Msa0011740:CDS 40.0%
!! CTGATTTGGGACTTAGAGAT+AGG - chr1_1:17678052-17678071 None:intergenic 40.0%
! ATGCCTTCAATCAGAAGTGT+CGG - chr1_1:17688657-17688676 None:intergenic 40.0%
TACATGTCTGTGTCGGATAT+TGG - chr1_1:17678180-17678199 None:intergenic 40.0%
TACATGCGTCAGTGTTGTAT+TGG - chr1_1:17688718-17688737 None:intergenic 40.0%
AGTATTGTGGAGCTTTACTG+AGG - chr1_1:17678687-17678706 None:intergenic 40.0%
CAGTAAAGCTCCACAATACT+TGG + chr1_1:17678687-17678706 Msa0011740:CDS 40.0%
GCACTCTGAATCAATGGAAA+AGG + chr1_1:17678714-17678733 Msa0011740:CDS 40.0%
TTGCATATTGGCAAGTGATG+TGG + chr1_1:17678738-17678757 Msa0011740:CDS 40.0%
AGTAATGATAAGTGGCTGCA+AGG - chr1_1:17678973-17678992 None:intergenic 40.0%
GATGACACTGCAGATAAACT+TGG + chr1_1:17679017-17679036 Msa0011740:intron 40.0%
CACTGCAGATAAACTTGGTT+TGG + chr1_1:17679022-17679041 Msa0011740:intron 40.0%
! GATGTTTGTGCGGACATTTT+AGG - chr1_1:17689693-17689712 None:intergenic 40.0%
CAATGTGTTCGATGTTTGTG+CGG - chr1_1:17679170-17679189 None:intergenic 40.0%
TCGAACACATTGAATGAGAG+TGG + chr1_1:17679178-17679197 Msa0011740:intron 40.0%
CGAACACATTGAATGAGAGT+GGG + chr1_1:17679179-17679198 Msa0011740:intron 40.0%
!! ACAAAACTGACTTGTAAGGC+GGG - chr1_1:17689763-17689782 None:intergenic 40.0%
ACCCTGTCCAATCTTCTAAA+AGG - chr1_1:17689895-17689914 None:intergenic 40.0%
TAATAGCTGCTCACAAAGCA+GGG + chr1_1:17679718-17679737 Msa0011740:CDS 40.0%
ACTTCATTTATGCCTGCCAA+TGG + chr1_1:17679789-17679808 Msa0011740:CDS 40.0%
TCTATGTTGTAACACAGGGT+AGG + chr1_1:17680007-17680026 Msa0011740:intron 40.0%
!! CCTTGTTTCAGGTTGGTTAA+TGG - chr1_1:17680143-17680162 None:intergenic 40.0%
CCATTAACCAACCTGAAACA+AGG + chr1_1:17680140-17680159 Msa0011740:intron 40.0%
! TGAAAGCTTTCCCTTGTTTC+AGG - chr1_1:17680154-17680173 None:intergenic 40.0%
TGAAACAAGGGAAAGCTTTC+AGG + chr1_1:17680153-17680172 Msa0011740:intron 40.0%
!! GAGGGTATCATCAAGTGTAA+TGG + chr1_1:17680179-17680198 Msa0011740:intron 40.0%
GAGAGTTGGGTGTGAAAATT+TGG - chr1_1:17680530-17680549 None:intergenic 40.0%
!!! AGATAGGGGTTTTGAGAGTT+GGG - chr1_1:17680543-17680562 None:intergenic 40.0%
!!! GGTTTTGGAGATGAAGTCTT+TGG + chr1_1:17680582-17680601 Msa0011740:intron 40.0%
TCTCTTCATTTCGTGGGTTT+AGG + chr1_1:17681433-17681452 Msa0011740:intron 40.0%
CTTGAAGCTGCAAAAATGGT+GGG + chr1_1:17681528-17681547 Msa0011740:CDS 40.0%
GACCTTCTTTGAGCATAGAT+TGG - chr1_1:17681569-17681588 None:intergenic 40.0%
ATGAGAATGTGAAGTTAGGG+GGG - chr1_1:17681697-17681716 None:intergenic 40.0%
AAACAAACTAGGGACCTGTT+AGG - chr1_1:17682353-17682372 None:intergenic 40.0%
! ACATCCTGCTGCTAAGATTT+TGG + chr1_1:17682496-17682515 Msa0011740:CDS 40.0%
!!! GCTAAGATTTTGGTTTTGGC+TGG + chr1_1:17682506-17682525 Msa0011740:CDS 40.0%
CAACAAGAGGAAATTGGTGA+TGG + chr1_1:17682536-17682555 Msa0011740:CDS 40.0%
! ATGGTGCTGAAGAGCTTATT+AGG + chr1_1:17682597-17682616 Msa0011740:CDS 40.0%
TGCTGAAGAGCTTATTAGGA+TGG + chr1_1:17682601-17682620 Msa0011740:CDS 40.0%
GCTGAAGAGCTTATTAGGAT+GGG + chr1_1:17682602-17682621 Msa0011740:CDS 40.0%
ACAAACCTTAGCAATGGCTT+TGG - chr1_1:17682660-17682679 None:intergenic 40.0%
! AGCCATTGCTAAGGTTTGTT+AGG + chr1_1:17682661-17682680 Msa0011740:intron 40.0%
! AAAAGCTGTCTTTTTGCGAG+AGG + chr1_1:17682869-17682888 Msa0011740:intron 40.0%
!! AGCGTAGCAGAGTTTTAACA+AGG - chr1_1:17682937-17682956 None:intergenic 40.0%
CAATCCCGTTCTGTACTATA+AGG + chr1_1:17683068-17683087 Msa0011740:intron 40.0%
GATCCCTTATAGTACAGAAC+GGG - chr1_1:17683075-17683094 None:intergenic 40.0%
CAGAGAGTCAGAGAAAATTG+AGG - chr1_1:17683099-17683118 None:intergenic 40.0%
! CAATTTTCTCTGACTCTCTG+AGG + chr1_1:17683099-17683118 Msa0011740:intron 40.0%
TTGGTTAGAGGAGTTTGCAA+GGG - chr1_1:17683455-17683474 None:intergenic 40.0%
TTTGGTTAGAGGAGTTTGCA+AGG - chr1_1:17683456-17683475 None:intergenic 40.0%
TTGACATTCCGACCTTTGTT+TGG + chr1_1:17683754-17683773 Msa0011740:intron 40.0%
GCGTAATAGTACAGTTGTTC+GGG + chr1_1:17683869-17683888 Msa0011740:CDS 40.0%
CGTAATAGTACAGTTGTTCG+GGG + chr1_1:17683870-17683889 Msa0011740:CDS 40.0%
!! GTTCTGAGAAATGATGCTGT+TGG + chr1_1:17683897-17683916 Msa0011740:CDS 40.0%
!!! TGAGACTTTTAGGGTTTCAC+CGG + chr1_1:17683966-17683985 Msa0011740:intron 40.0%
AGATAGCCCATCTGTAGTAT+TGG - chr1_1:17684392-17684411 None:intergenic 40.0%
AGTCTTCAATAAGCCAAGTG+GGG - chr1_1:17684528-17684547 None:intergenic 40.0%
GAAGTCTTCAATAAGCCAAG+TGG - chr1_1:17684530-17684549 None:intergenic 40.0%
GGGTACATACCATTTGTGAA+AGG + chr1_1:17684587-17684606 Msa0011740:intron 40.0%
GGAAGACATGACAACTAGTA+TGG - chr1_1:17684682-17684701 None:intergenic 40.0%
TGCAATAGCATATCATGGTG+AGG - chr1_1:17684880-17684899 None:intergenic 40.0%
TCATACTGTGTCTTGTACTG+AGG + chr1_1:17684905-17684924 Msa0011740:intron 40.0%
TCTCATACATTCTGCTGAAC+AGG + chr1_1:17685006-17685025 Msa0011740:CDS 40.0%
! ATTTCCCTTTTATGGGGAGT+GGG - chr1_1:17685154-17685173 None:intergenic 40.0%
! AATTTCCCTTTTATGGGGAG+TGG - chr1_1:17685155-17685174 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr1_1:17685227-17685246 Msa0011740:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + chr1_1:17685264-17685283 Msa0011740:intron 40.0%
GTGGAAGAAAGAGAAGACAT+TGG + chr1_1:17685292-17685311 Msa0011740:intron 40.0%
AAGAAAGAGAAGACATTGGG+AGG + chr1_1:17685296-17685315 Msa0011740:intron 40.0%
TAAAAGATCCCCCTCATTTG+GGG + chr1_1:17685352-17685371 Msa0011740:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr1_1:17685365-17685384 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr1_1:17685366-17685385 None:intergenic 40.0%
GGGGAACTCAAAAATTGCAT+TGG + chr1_1:17685372-17685391 Msa0011740:intron 40.0%
TCAAAAATTGCATTGGGGGA+GGG + chr1_1:17685379-17685398 Msa0011740:intron 40.0%
CGGCAGTGTATTTCAATCAA+TGG + chr1_1:17685822-17685841 Msa0011740:intron 40.0%
AACTACAAGCACACCAAAGA+AGG + chr1_1:17685859-17685878 Msa0011740:intron 40.0%
! GAACTTAAGACAGGATTGGT+AGG - chr1_1:17685949-17685968 None:intergenic 40.0%
GTTGGAACTTAAGACAGGAT+TGG - chr1_1:17685953-17685972 None:intergenic 40.0%
GCCTGTGATATCAATGATGA+CGG + chr1_1:17686001-17686020 Msa0011740:intron 40.0%
TCCGTCATCATTGATATCAC+AGG - chr1_1:17686005-17686024 None:intergenic 40.0%
!! GAAAAGTGTTTAGAAGGGCA+GGG + chr1_1:17686057-17686076 Msa0011740:intron 40.0%
!! AAAAGTGTTTAGAAGGGCAG+GGG + chr1_1:17686058-17686077 Msa0011740:intron 40.0%
AGGGGAATCAAAGCTAGTAT+TGG + chr1_1:17686166-17686185 Msa0011740:intron 40.0%
! GGAATCAAAGCTAGTATTGG+TGG + chr1_1:17686169-17686188 Msa0011740:intron 40.0%
! TCATGGTCAGAGCTTTTGTT+TGG + chr1_1:17696796-17696815 Msa0011740:intron 40.0%
ACTGTTATGATCTGATGTGC+CGG + chr1_1:17696925-17696944 Msa0011740:intron 40.0%
! ATCAAGGCTGTAGTTGATTC+TGG + chr1_1:17697098-17697117 Msa0011740:CDS 40.0%
CGATAGCATGAGGCAATTAA+AGG - chr1_1:17697217-17697236 None:intergenic 40.0%
ATTTGATGTGCGATAGCATG+AGG - chr1_1:17697227-17697246 None:intergenic 40.0%
TATCCAAGATCATCTGGGTT+TGG - chr1_1:17697516-17697535 None:intergenic 40.0%
GTTTCAGTTGAGGAAATTGG+TGG + chr1_1:17697546-17697565 Msa0011740:CDS 40.0%
! TCCCTCTTGTTTAATGATGC+AGG + chr1_1:17697677-17697696 Msa0011740:intron 40.0%
CACCTGCATCATTAAACAAG+AGG - chr1_1:17697682-17697701 None:intergenic 40.0%
TGATGGAGTGAACACTTACA+AGG + chr1_1:17697800-17697819 Msa0011740:CDS 40.0%
CTGAAATTGAGTTAGCCAAG+AGG + chr1_1:17698062-17698081 Msa0011740:intron 40.0%
! GGTGAAAGAGTTTTCCTTCA+AGG + chr1_1:17698084-17698103 Msa0011740:intron 40.0%
! AGTTTTCCTTCAAGGAGACA+GGG + chr1_1:17698092-17698111 Msa0011740:intron 40.0%
! TCCCACATTGGTTAATGATG+TGG + chr1_1:17698147-17698166 Msa0011740:intron 40.0%
GACCACATCATTAACCAATG+TGG - chr1_1:17698152-17698171 None:intergenic 40.0%
!! GTTGGTTTGTAGAGTTGAGT+TGG + chr1_1:17698207-17698226 Msa0011740:intron 40.0%
GGGACACATATAAAATCTGG+TGG - chr1_1:17698252-17698271 None:intergenic 40.0%
TGAACAATGTGGCCTGATAA+CGG - chr1_1:17698291-17698310 None:intergenic 40.0%
TCCCACATTGAATAGTGACA+TGG + chr1_1:17698358-17698377 Msa0011740:intron 40.0%
GCCATGTCACTATTCAATGT+GGG - chr1_1:17698362-17698381 None:intergenic 40.0%
AGCCATGTCACTATTCAATG+TGG - chr1_1:17698363-17698382 None:intergenic 40.0%
! TTTTAGCCCTCACCTTTATC+AGG + chr1_1:17698382-17698401 Msa0011740:intron 40.0%
AATGTCTAGTCATGAGTGTG+AGG + chr1_1:17698424-17698443 Msa0011740:intron 40.0%
ATGTCTAGTCATGAGTGTGA+GGG + chr1_1:17698425-17698444 Msa0011740:intron 40.0%
TATGTTGAGAGACCGACATT+TGG + chr1_1:17698451-17698470 Msa0011740:intron 40.0%
ACCGACATTTGGCTGTAATA+TGG + chr1_1:17698462-17698481 Msa0011740:intron 40.0%
GCCATATTACAGCCAAATGT+CGG - chr1_1:17698466-17698485 None:intergenic 40.0%
! CAAAACCTATTTGTTCGGTG+AGG - chr1_1:17698518-17698537 None:intergenic 40.0%
!! CCGAACAAATAGGTTTTGTG+TGG + chr1_1:17698520-17698539 Msa0011740:intron 40.0%
GAACTGTCCCAAAACTATGA+TGG + chr1_1:17698545-17698564 Msa0011740:intron 40.0%
TGGTGCACGTATAATATGGT+GGG - chr1_1:17698605-17698624 None:intergenic 40.0%
TTGGTGCACGTATAATATGG+TGG - chr1_1:17698606-17698625 None:intergenic 40.0%
!! GACTTGGTGCACGTATAATA+TGG - chr1_1:17698609-17698628 None:intergenic 40.0%
GTTCTCAGTATTCTTGGACT+TGG - chr1_1:17698625-17698644 None:intergenic 40.0%
AGTCCAAGAATACTGAGAAC+GGG + chr1_1:17698625-17698644 Msa0011740:intron 40.0%
AAACCCGTTCTCAGTATTCT+TGG - chr1_1:17698631-17698650 None:intergenic 40.0%
CAAGTCTCGCATTAGAGATA+AGG + chr1_1:17698673-17698692 Msa0011740:intron 40.0%
GATGATTCCTAGAACATTGG+CGG + chr1_1:17698903-17698922 Msa0011740:CDS 40.0%
GCATCAGGAAACACTAAAGT+TGG + chr1_1:17698979-17698998 Msa0011740:CDS 40.0%
ATGTCACAACCACACATGTT+TGG + chr1_1:17699031-17699050 Msa0011740:CDS 40.0%
TGTCACAACCACACATGTTT+GGG + chr1_1:17699032-17699051 Msa0011740:CDS 40.0%
TAGTGGAAACCCCTTACTTA+AGG + chr1_1:17699131-17699150 Msa0011740:intron 40.0%
CCCTTACTTAAGGCAAATGA+TGG + chr1_1:17699141-17699160 Msa0011740:intron 40.0%
ACTTGTCATTGAATGGTACG+AGG - chr1_1:17699297-17699316 None:intergenic 40.0%
! CATGTGTTCAATCTTTAGGG+AGG - chr1_1:17699480-17699499 None:intergenic 40.0%
! CTGAACCAGTTTTTATGGGA+AGG - chr1_1:17699683-17699702 None:intergenic 40.0%
AGGGAGTAGCAATTAACAGA+AGG + chr1_1:17699708-17699727 Msa0011740:intron 40.0%
GTTATCAGCAAGACCCAATT+GGG - chr1_1:17699845-17699864 None:intergenic 40.0%
TGTTATCAGCAAGACCCAAT+TGG - chr1_1:17699846-17699865 None:intergenic 40.0%
TCGATACTAGTAAGGAGAGT+AGG + chr1_1:17699883-17699902 Msa0011740:intron 40.0%
GAGAGAGGGATAATGTGTAA+TGG + chr1_1:17699970-17699989 Msa0011740:intron 40.0%
!! CTCACCAATCAATGGACTTT+TGG - chr1_1:17700060-17700079 None:intergenic 40.0%
! CAAAAGTCCATTGATTGGTG+AGG + chr1_1:17700058-17700077 Msa0011740:intron 40.0%
! AAAGTCCATTGATTGGTGAG+GGG + chr1_1:17700060-17700079 Msa0011740:intron 40.0%
ATCAGCTCACCAAAAGTCTA+AGG - chr1_1:17700087-17700106 None:intergenic 40.0%
GTTACTGAATCCAATCGACT+TGG + chr1_1:17700398-17700417 Msa0011740:intron 40.0%
!! GTGAGAACTGACTCTTGTTT+TGG + chr1_1:17700719-17700738 Msa0011740:three_prime_UTR 40.0%
ACATGATGTCCTACTACACT+TGG + chr1_1:17700758-17700777 Msa0011740:three_prime_UTR 40.0%
GAGTTATGACACTACATGTC+TGG - chr1_1:17701001-17701020 None:intergenic 40.0%
! GAAGGACGGTACTGAACATA+AGG + chr1_1:17675265-17675284 Msa0011740:five_prime_UTR 45.0%
GAATGGGGTAGAGAAAGAAG+GGG - chr1_1:17675362-17675381 None:intergenic 45.0%
GTGAAGGAACATGAAACGGT+TGG - chr1_1:17675403-17675422 None:intergenic 45.0%
TCCAACAAAAGAGTGAGTGC+TGG + chr1_1:17676035-17676054 Msa0011740:intron 45.0%
! ACCAGCACTCACTCTTTTGT+TGG - chr1_1:17676039-17676058 None:intergenic 45.0%
! AATAGACGTGATTTGGGGGA+TGG + chr1_1:17676282-17676301 Msa0011740:intron 45.0%
!! GAACACTCGTATGATAGTGG+CGG - chr1_1:17676405-17676424 None:intergenic 45.0%
GGTTACTGGTCAAATTCTGC+AGG + chr1_1:17676941-17676960 Msa0011740:intron 45.0%
GCTCTTGACAGATTTGCAGA+AGG + chr1_1:17677023-17677042 Msa0011740:CDS 45.0%
ACAGATTTGCAGAAGGGTCA+TGG + chr1_1:17677030-17677049 Msa0011740:CDS 45.0%
CAGATTTGCAGAAGGGTCAT+GGG + chr1_1:17677031-17677050 Msa0011740:CDS 45.0%
CTGGTATAGAGGAAGAGCTT+CGG + chr1_1:17677234-17677253 Msa0011740:CDS 45.0%
TTCTACAACAGGCAATCCGA+GGG - chr1_1:17677297-17677316 None:intergenic 45.0%
ATTCTACAACAGGCAATCCG+AGG - chr1_1:17677298-17677317 None:intergenic 45.0%
AAACTGGCAAATCTACAGGG+AGG + chr1_1:17677651-17677670 Msa0011740:CDS 45.0%
CTGTGCAGACCTTAGTGAAT+AGG + chr1_1:17677702-17677721 Msa0011740:CDS 45.0%
TGATGAATATCGGCAGGGAT+TGG + chr1_1:17677784-17677803 Msa0011740:CDS 45.0%
CCTGTATAAGGCGAACAACA+GGG - chr1_1:17677923-17677942 None:intergenic 45.0%
CCTGTTGTTCGCCTTATACA+GGG + chr1_1:17677921-17677940 Msa0011740:intron 45.0%
GTAGGTCTACTCCCTGTATA+AGG - chr1_1:17677935-17677954 None:intergenic 45.0%
TATACAGGGAGTAGACCTAC+TGG + chr1_1:17677935-17677954 Msa0011740:intron 45.0%
GGCTGTTATAAGCCATCTAG+TGG + chr1_1:17677968-17677987 Msa0011740:CDS 45.0%
AGAGATAGGCTCAAGGGAAT+TGG - chr1_1:17678038-17678057 None:intergenic 45.0%
GGACTTAGAGATAGGCTCAA+GGG - chr1_1:17678044-17678063 None:intergenic 45.0%
GTAGTTGCTACATCCGAAGT+TGG + chr1_1:17678311-17678330 Msa0011740:intron 45.0%
! TTTTTGCCATGTGTGCTAGC+TGG + chr1_1:17678661-17678680 Msa0011740:intron 45.0%
! GAGTGCATCACCAAGTATTG+TGG - chr1_1:17678700-17678719 None:intergenic 45.0%
GGTGATGCACTCTGAATCAA+TGG + chr1_1:17678708-17678727 Msa0011740:CDS 45.0%
GCAGCCACTTATCATTACTG+TGG + chr1_1:17678974-17678993 Msa0011740:intron 45.0%
GATGTTTGTGCGGACAGTTT+AGG - chr1_1:17679160-17679179 None:intergenic 45.0%
GTAATAGCTGCTCACAAAGC+AGG + chr1_1:17679717-17679736 Msa0011740:CDS 45.0%
GTATTTGAGTGACCATTGGC+AGG - chr1_1:17679804-17679823 None:intergenic 45.0%
! AGCTTTCCCTTGTTTCAGGT+TGG - chr1_1:17680150-17680169 None:intergenic 45.0%
ACAAGGGAAAGCTTTCAGGA+TGG + chr1_1:17680157-17680176 Msa0011740:intron 45.0%
CTGATCAAAGATGTGTCCGA+CGG + chr1_1:17680253-17680272 Msa0011740:intron 45.0%
ACGCATCAAGTGTACGTTGT+TGG + chr1_1:17680355-17680374 Msa0011740:intron 45.0%
CATCAAGTGTACGTTGTTGG+TGG + chr1_1:17680358-17680377 Msa0011740:intron 45.0%
!!! CAGATAGGGGTTTTGAGAGT+TGG - chr1_1:17680544-17680563 None:intergenic 45.0%
CAACTCTCAAAACCCCTATC+TGG + chr1_1:17680542-17680561 Msa0011740:intron 45.0%
TCTCAAAACCCCTATCTGGA+AGG + chr1_1:17680546-17680565 Msa0011740:intron 45.0%
CTCAAAACCCCTATCTGGAA+GGG + chr1_1:17680547-17680566 Msa0011740:intron 45.0%
TCAAAACCCCTATCTGGAAG+GGG + chr1_1:17680548-17680567 Msa0011740:intron 45.0%
AAAATCCCCCCTTCCAGATA+GGG - chr1_1:17680558-17680577 None:intergenic 45.0%
TAAAATCCCCCCTTCCAGAT+AGG - chr1_1:17680559-17680578 None:intergenic 45.0%
! TCTGGAAGGGGGGATTTTAT+AGG + chr1_1:17680560-17680579 Msa0011740:intron 45.0%
! CTGGAAGGGGGGATTTTATA+GGG + chr1_1:17680561-17680580 Msa0011740:intron 45.0%
! GGGGGGATTTTATAGGGTTT+TGG + chr1_1:17680567-17680586 Msa0011740:intron 45.0%
TAGCATGAGGAGGAAACAAG+TGG - chr1_1:17681255-17681274 None:intergenic 45.0%
! TCTAAAGCCCGAGGTTTCTA+GGG + chr1_1:17681395-17681414 Msa0011740:intron 45.0%
AGCACAACATAACTGCAGCA+GGG + chr1_1:17681463-17681482 Msa0011740:intron 45.0%
GCTTGAAGCTGCAAAAATGG+TGG + chr1_1:17681527-17681546 Msa0011740:CDS 45.0%
GAAGGTCACAAACATCTCTC+TGG + chr1_1:17681582-17681601 Msa0011740:CDS 45.0%
AATGTGAAGTTAGGGGGGTA+GGG - chr1_1:17681692-17681711 None:intergenic 45.0%
AACTAGGGACCTGTTAGGAT+TGG - chr1_1:17682348-17682367 None:intergenic 45.0%
CATCCCAGTGAGATTATCAG+TGG + chr1_1:17682629-17682648 Msa0011740:CDS 45.0%
! CTCTGACTCTCTGAGGATAT+TGG + chr1_1:17683106-17683125 Msa0011740:intron 45.0%
! GACTCTCTGAGGATATTGGA+TGG + chr1_1:17683110-17683129 Msa0011740:intron 45.0%
TGGATTTGGGGAGAAAGAGA+AGG + chr1_1:17683255-17683274 Msa0011740:intron 45.0%
GGATTTGGGGAGAAAGAGAA+GGG + chr1_1:17683256-17683275 Msa0011740:intron 45.0%
!! TTGGACGAACTTGTTGAGGA+AGG + chr1_1:17683558-17683577 Msa0011740:CDS 45.0%
TGAGGAAGGTTCCGACAATA+TGG + chr1_1:17683572-17683591 Msa0011740:CDS 45.0%
GTCACGGACATCCATATTGT+CGG - chr1_1:17683586-17683605 None:intergenic 45.0%
CAATATGGATGTCCGTGACA+AGG + chr1_1:17683587-17683606 Msa0011740:CDS 45.0%
GCTGTTGCTAGCAAGCAATT+CGG + chr1_1:17683636-17683655 Msa0011740:CDS 45.0%
!!! CAGGGTTTTTTGGACACACT+TGG - chr1_1:17683797-17683816 None:intergenic 45.0%
TAGTACAGTTGTTCGGGGAA+TGG + chr1_1:17683875-17683894 Msa0011740:CDS 45.0%
!! CTTGTGCACAACACTGATTC+TGG - chr1_1:17684308-17684327 None:intergenic 45.0%
CACAAATGGTATGTACCCCA+TGG - chr1_1:17684585-17684604 None:intergenic 45.0%
!! TTTTAGGTGGCTGTGTTTGC+TGG + chr1_1:17684944-17684963 Msa0011740:intron 45.0%
ATTCCCCACTCCCCATAAAA+GGG + chr1_1:17685147-17685166 Msa0011740:intron 45.0%
! TTTCCCTTTTATGGGGAGTG+GGG - chr1_1:17685153-17685172 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_1:17685231-17685250 Msa0011740:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_1:17685232-17685251 Msa0011740:intron 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + chr1_1:17685260-17685279 Msa0011740:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr1_1:17685273-17685292 Msa0011740:intron 45.0%
AAAAGATCCCCCTCATTTGG+GGG + chr1_1:17685353-17685372 Msa0011740:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - chr1_1:17685364-17685383 None:intergenic 45.0%
CTCAAAAATTGCATTGGGGG+AGG + chr1_1:17685378-17685397 Msa0011740:intron 45.0%
!! TAAGGCTTTGTTTGGGAGCT+TGG - chr1_1:17685603-17685622 None:intergenic 45.0%
GCTACTGGATAACATTCCAG+AGG - chr1_1:17685673-17685692 None:intergenic 45.0%
!! GAAGGTTTCTGGTTAGCTAC+TGG - chr1_1:17685688-17685707 None:intergenic 45.0%
TAGTTGCTAAACATGCTCGC+CGG + chr1_1:17685802-17685821 Msa0011740:intron 45.0%
ACAAGCACACCAAAGAAGGA+TGG + chr1_1:17685863-17685882 Msa0011740:intron 45.0%
!! AAGTTCTGGGTCCTTTCTGT+TGG - chr1_1:17685923-17685942 None:intergenic 45.0%
GATTGGTAGGGTGAAGTTCT+GGG - chr1_1:17685936-17685955 None:intergenic 45.0%
ACGCGTGCAATGTTCTGTTT+AGG + chr1_1:17686026-17686045 Msa0011740:intron 45.0%
!! GGAAAAGTGTTTAGAAGGGC+AGG + chr1_1:17686056-17686075 Msa0011740:intron 45.0%
!! AGTATTGGTGGAAGATAGCG+TGG + chr1_1:17686181-17686200 Msa0011740:intron 45.0%
GTGGAAAGGGAAAACCATGA+AGG + chr1_1:17686200-17686219 Msa0011740:intron 45.0%
GAATGGGGTAGAGAAAGAAG+GGG - chr1_1:17675362-17675381 None:intergenic 45.0%
GAGAAGGAACATGAAACGGT+TGG - chr1_1:17686381-17686400 None:intergenic 45.0%
!! TATGCGTCTGTTTGGTTCTG+CGG + chr1_1:17686808-17686827 Msa0011740:intron 45.0%
GCCAATTAAGCTGAGACTTG+AGG - chr1_1:17686927-17686946 None:intergenic 45.0%
TTGAAACTCACACACAGGAG+TGG - chr1_1:17687006-17687025 None:intergenic 45.0%
CTCCTGTGTGTGAGTTTCAA+TGG + chr1_1:17687006-17687025 Msa0011740:intron 45.0%
CATTTAGCACTATTGGGGTC+GGG - chr1_1:17687337-17687356 None:intergenic 45.0%
GCGGGAACATTTAGCACTAT+TGG - chr1_1:17687344-17687363 None:intergenic 45.0%
CTCTTGACAGATTCGCAGAA+GGG + chr1_1:17687515-17687534 Msa0011740:CDS 45.0%
ACTTCGGATTCGACAGTTAC+AGG + chr1_1:17687747-17687766 Msa0011740:CDS 45.0%
AAACTGGCAAATCTACAGGG+AGG + chr1_1:17677651-17677670 Msa0011740:CDS 45.0%
CTGTGCAGACCTTAGTGAAT+AGG + chr1_1:17677702-17677721 Msa0011740:CDS 45.0%
TGATGAATATCGGCAGGGAT+TGG + chr1_1:17677784-17677803 Msa0011740:CDS 45.0%
CCTGTATAAGGCGAACAACA+GGG - chr1_1:17677923-17677942 None:intergenic 45.0%
CCTGTTGTTCGCCTTATACA+GGG + chr1_1:17677921-17677940 Msa0011740:intron 45.0%
GTAGGTCTACTCCCTGTATA+AGG - chr1_1:17677935-17677954 None:intergenic 45.0%
TATACAGGGAGTAGACCTAC+TGG + chr1_1:17677935-17677954 Msa0011740:intron 45.0%
GGCAGTTATAAGCCATCTAG+TGG + chr1_1:17688470-17688489 Msa0011740:CDS 45.0%
GAGCATGTGCACAAGGAATT+TGG - chr1_1:17688506-17688525 None:intergenic 45.0%
GCAGCCACTTATCATTACTG+TGG + chr1_1:17678974-17678993 Msa0011740:intron 45.0%
GTAATAGCTGCTCACAAAGC+AGG + chr1_1:17679717-17679736 Msa0011740:CDS 45.0%
GTATTTGAGTGACCATTGGC+AGG - chr1_1:17679804-17679823 None:intergenic 45.0%
! AGCTTTCCCTTGTTTCAGGT+TGG - chr1_1:17680150-17680169 None:intergenic 45.0%
ACAAGGGAAAGCTTTCAGGA+TGG + chr1_1:17680157-17680176 Msa0011740:intron 45.0%
AAAGCTTTCAGGATGGATGG+AGG + chr1_1:17690689-17690708 Msa0011740:intron 45.0%
AAGCTTTCAGGATGGATGGA+GGG + chr1_1:17690690-17690709 Msa0011740:intron 45.0%
CTGATCAAAGATGTGTCCGA+CGG + chr1_1:17680253-17680272 Msa0011740:intron 45.0%
ACGCATCAAGTGTACGTTGT+TGG + chr1_1:17680355-17680374 Msa0011740:intron 45.0%
CATCAAGTGTACGTTGTTGG+TGG + chr1_1:17680358-17680377 Msa0011740:intron 45.0%
!!! CAGATAGGGGTTTTGAGAGT+TGG - chr1_1:17680544-17680563 None:intergenic 45.0%
CAACTCTCAAAACCCCTATC+TGG + chr1_1:17680542-17680561 Msa0011740:intron 45.0%
TCTCAAAACCCCTATCTGGA+AGG + chr1_1:17680546-17680565 Msa0011740:intron 45.0%
CTCAAAACCCCTATCTGGAA+GGG + chr1_1:17680547-17680566 Msa0011740:intron 45.0%
TCAAAACCCCTATCTGGAAG+GGG + chr1_1:17680548-17680567 Msa0011740:intron 45.0%
AAAATCCCCCCTTCCAGATA+GGG - chr1_1:17680558-17680577 None:intergenic 45.0%
TAAAATCCCCCCTTCCAGAT+AGG - chr1_1:17680559-17680578 None:intergenic 45.0%
! TCTGGAAGGGGGGATTTTAT+AGG + chr1_1:17680560-17680579 Msa0011740:intron 45.0%
! CTGGAAGGGGGGATTTTATA+GGG + chr1_1:17680561-17680580 Msa0011740:intron 45.0%
! GGGGGGATTTTATAGGGTTT+TGG + chr1_1:17680567-17680586 Msa0011740:intron 45.0%
!!! TTTGGAGGGAAGTTTTGGAG+TGG - chr1_1:17691273-17691292 None:intergenic 45.0%
TAGCATGAGGAGGAAACAAG+TGG - chr1_1:17681255-17681274 None:intergenic 45.0%
! TCTAAAGCCCGAGGTTTCTA+GGG + chr1_1:17681395-17681414 Msa0011740:intron 45.0%
AGCACAACATAACTGCAGCA+GGG + chr1_1:17681463-17681482 Msa0011740:intron 45.0%
GCTTGAAGCTGCAAAAATGG+TGG + chr1_1:17681527-17681546 Msa0011740:CDS 45.0%
GAAGGTCACAAACATCTCTC+TGG + chr1_1:17681582-17681601 Msa0011740:CDS 45.0%
AATGTGAAGTTAGGGGGGTA+GGG - chr1_1:17681692-17681711 None:intergenic 45.0%
AACTAGGGACCTGTTAGGAT+TGG - chr1_1:17682348-17682367 None:intergenic 45.0%
CATCCCAGTGAGATTATCAG+TGG + chr1_1:17682629-17682648 Msa0011740:CDS 45.0%
! CTCTGACTCTCTGAGGATAT+TGG + chr1_1:17683106-17683125 Msa0011740:intron 45.0%
! GACTCTCTGAGGATATTGGA+TGG + chr1_1:17683110-17683129 Msa0011740:intron 45.0%
TGGATTTGGGGAGAAAGAGA+AGG + chr1_1:17683255-17683274 Msa0011740:intron 45.0%
GGATTTGGGGAGAAAGAGAA+GGG + chr1_1:17683256-17683275 Msa0011740:intron 45.0%
!! TTGGACGAACTTGTTGAGGA+AGG + chr1_1:17683558-17683577 Msa0011740:CDS 45.0%
TGAGGAAGGTTCCGACAATA+TGG + chr1_1:17683572-17683591 Msa0011740:CDS 45.0%
GTCACGGACATCCATATTGT+CGG - chr1_1:17683586-17683605 None:intergenic 45.0%
CAATATGGATGTCCGTGACA+AGG + chr1_1:17683587-17683606 Msa0011740:CDS 45.0%
GCTGTTGCTAGCAAGCAATT+CGG + chr1_1:17683636-17683655 Msa0011740:CDS 45.0%
!!! CAGGGTTTTTTGGACACACT+TGG - chr1_1:17683797-17683816 None:intergenic 45.0%
TAGTACAGTTGTTCGGGGAA+TGG + chr1_1:17683875-17683894 Msa0011740:CDS 45.0%
!! CTTGTGCACAACACTGATTC+TGG - chr1_1:17684308-17684327 None:intergenic 45.0%
CACAAATGGTATGTACCCCA+TGG - chr1_1:17684585-17684604 None:intergenic 45.0%
!! TTTTAGGTGGCTGTGTTTGC+TGG + chr1_1:17684944-17684963 Msa0011740:intron 45.0%
ATTCCCCACTCCCCATAAAA+GGG + chr1_1:17685147-17685166 Msa0011740:intron 45.0%
! TTTCCCTTTTATGGGGAGTG+GGG - chr1_1:17685153-17685172 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_1:17685231-17685250 Msa0011740:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_1:17685232-17685251 Msa0011740:intron 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + chr1_1:17685260-17685279 Msa0011740:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr1_1:17685273-17685292 Msa0011740:intron 45.0%
AAAAGATCCCCCTCATTTGG+GGG + chr1_1:17685353-17685372 Msa0011740:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - chr1_1:17685364-17685383 None:intergenic 45.0%
CTCAAAAATTGCATTGGGGG+AGG + chr1_1:17685378-17685397 Msa0011740:intron 45.0%
!! TAAGGCTTTGTTTGGGAGCT+TGG - chr1_1:17685603-17685622 None:intergenic 45.0%
GCTACTGGATAACATTCCAG+AGG - chr1_1:17685673-17685692 None:intergenic 45.0%
!! GAAGGTTTCTGGTTAGCTAC+TGG - chr1_1:17685688-17685707 None:intergenic 45.0%
TAGTTGCTAAACATGCTCGC+CGG + chr1_1:17685802-17685821 Msa0011740:intron 45.0%
ACAAGCACACCAAAGAAGGA+TGG + chr1_1:17685863-17685882 Msa0011740:intron 45.0%
!! AAGTTCTGGGTCCTTTCTGT+TGG - chr1_1:17685923-17685942 None:intergenic 45.0%
GATTGGTAGGGTGAAGTTCT+GGG - chr1_1:17685936-17685955 None:intergenic 45.0%
ACGCGTGCAATGTTCTGTTT+AGG + chr1_1:17686026-17686045 Msa0011740:intron 45.0%
!! GGAAAAGTGTTTAGAAGGGC+AGG + chr1_1:17686056-17686075 Msa0011740:intron 45.0%
!! AGTATTGGTGGAAGATAGCG+TGG + chr1_1:17686181-17686200 Msa0011740:intron 45.0%
ACTGCTGTACAAAGCTGTCA+TGG + chr1_1:17696779-17696798 Msa0011740:intron 45.0%
CTGTTATGATCTGATGTGCC+GGG + chr1_1:17696926-17696945 Msa0011740:intron 45.0%
TCCTCCGCTTACAATCACTT+GGG - chr1_1:17697126-17697145 None:intergenic 45.0%
TAGCTACAGAACCAGTCGTA+CGG - chr1_1:17697395-17697414 None:intergenic 45.0%
!! TACGACTGGTTCTGTAGCTA+TGG + chr1_1:17697395-17697414 Msa0011740:CDS 45.0%
!! TTGAGGAAATTGGTGGTGCA+AGG + chr1_1:17697553-17697572 Msa0011740:CDS 45.0%
!! TGAGGAAATTGGTGGTGCAA+GGG + chr1_1:17697554-17697573 Msa0011740:CDS 45.0%
GTATGGCCTCTGCAAACATA+CGG + chr1_1:17697903-17697922 Msa0011740:intron 45.0%
TATGGCCTCTGCAAACATAC+GGG + chr1_1:17697904-17697923 Msa0011740:intron 45.0%
GGAAAACTCTTTCACCCTCT+TGG - chr1_1:17698080-17698099 None:intergenic 45.0%
! GAGTTTTCCTTCAAGGAGAC+AGG + chr1_1:17698091-17698110 Msa0011740:intron 45.0%
GCAACCCTCACCTTAAAAGT+TGG + chr1_1:17698189-17698208 Msa0011740:intron 45.0%
GAACAATGTGGCCTGATAAC+GGG - chr1_1:17698290-17698309 None:intergenic 45.0%
! CATCTGAAGCGTGAACAATG+TGG - chr1_1:17698302-17698321 None:intergenic 45.0%
TATGTTCAGTCTTCGGCATG+TGG + chr1_1:17698322-17698341 Msa0011740:intron 45.0%
! CATTTAAAGTGAGACCCTCG+TGG - chr1_1:17698408-17698427 None:intergenic 45.0%
!! TAATATGGTGGGTGGTCTGA+TGG - chr1_1:17698594-17698613 None:intergenic 45.0%
! TGCACGTATAATATGGTGGG+TGG - chr1_1:17698602-17698621 None:intergenic 45.0%
! ATACTGAGAACGGGTTTGAG+AGG + chr1_1:17698634-17698653 Msa0011740:intron 45.0%
! AACGGGTTTGAGAGGTGTAA+TGG + chr1_1:17698642-17698661 Msa0011740:intron 45.0%
! TTTGCAATGGCTCTGCAGAT+TGG + chr1_1:17698843-17698862 Msa0011740:intron 45.0%
GAATGCTGGGCTAAATGCAA+TGG + chr1_1:17698927-17698946 Msa0011740:CDS 45.0%
!! AGTTGGCATTGATTTGGACG+AGG + chr1_1:17698996-17699015 Msa0011740:CDS 45.0%
!! GTTGGCATTGATTTGGACGA+GGG + chr1_1:17698997-17699016 Msa0011740:CDS 45.0%
!! TTTGGACGAGGGTGTTTGTA+AGG + chr1_1:17699008-17699027 Msa0011740:CDS 45.0%
! ACATGTTTGGGATCTCCACA+TGG + chr1_1:17699044-17699063 Msa0011740:CDS 45.0%
ACCAGCACTTGTGACAAATG+TGG + chr1_1:17699228-17699247 Msa0011740:intron 45.0%
TCCACATTTGTCACAAGTGC+TGG - chr1_1:17699232-17699251 None:intergenic 45.0%
ATGCTGCATGCACTGTACTA+CGG + chr1_1:17699368-17699387 Msa0011740:CDS 45.0%
GTCTTCCTAAGGATTACACC+TGG + chr1_1:17699505-17699524 Msa0011740:intron 45.0%
GCAAGCCTTCCCATAAAAAC+TGG + chr1_1:17699675-17699694 Msa0011740:intron 45.0%
TGGGTCTTGCTGATAACAGT+AGG + chr1_1:17699848-17699867 Msa0011740:intron 45.0%
TAAGGAGAGTAGGCCCTATA+TGG + chr1_1:17699893-17699912 Msa0011740:intron 45.0%
! AAGTCCATTGATTGGTGAGG+GGG + chr1_1:17700061-17700080 Msa0011740:intron 45.0%
!! ACTGAATCCAATCGACTTGG+AGG + chr1_1:17700401-17700420 Msa0011740:intron 45.0%
GTTCATTCCTCCAAGTCGAT+TGG - chr1_1:17700411-17700430 None:intergenic 45.0%
ACTAAGTGGGGTAAGCTACA+TGG - chr1_1:17700504-17700523 None:intergenic 45.0%
ATGTAGCTTACCCCACTTAG+TGG + chr1_1:17700503-17700522 Msa0011740:intron 45.0%
TGTAGCTTACCCCACTTAGT+GGG + chr1_1:17700504-17700523 Msa0011740:intron 45.0%
ACCCAATCATCCCACTAAGT+GGG - chr1_1:17700517-17700536 None:intergenic 45.0%
TACCCAATCATCCCACTAAG+TGG - chr1_1:17700518-17700537 None:intergenic 45.0%
ATTATTATGGCGAAACCGGC+TGG + chr1_1:17700646-17700665 Msa0011740:CDS 45.0%
TCCTACTACACTTGGCATCT+TGG + chr1_1:17700766-17700785 Msa0011740:three_prime_UTR 45.0%
!!! TATGATATATATATATTTTT+TGG + chr1_1:17679874-17679893 Msa0011740:intron 5.0%
!! AAAATTATATAGAATTTATA+TGG - chr1_1:17681004-17681023 None:intergenic 5.0%
!!! TTTATTTACTTTTATTTTTA+AGG - chr1_1:17681355-17681374 None:intergenic 5.0%
!!! ATTTTTTTTTCTTTTTTTAT+TGG - chr1_1:17687055-17687074 None:intergenic 5.0%
!! AAAATTATATAGAATTTATA+TGG - chr1_1:17681004-17681023 None:intergenic 5.0%
!!! TTTATTTACTTTTATTTTTA+AGG - chr1_1:17681355-17681374 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTATAG+TGG + chr1_1:17699114-17699133 Msa0011740:intron 5.0%
!!! TAATTTATTTTTTTTATTTG+GGG + chr1_1:17700936-17700955 Msa0011740:three_prime_UTR 5.0%
!! AGTGTGATGATAGTGCCGAC+TGG + chr1_1:17675544-17675563 Msa0011740:CDS 50.0%
!! ATGATAGTGCCGACTGGAAC+TGG + chr1_1:17675550-17675569 Msa0011740:CDS 50.0%
ACCAGCAAACCCACCAATAG+CGG - chr1_1:17675578-17675597 None:intergenic 50.0%
!!! GTGTGTGTTTGGTTTTGCGG+TGG + chr1_1:17675850-17675869 Msa0011740:intron 50.0%
TACAAGTAGCCGATGCTGCA+AGG + chr1_1:17677267-17677286 Msa0011740:CDS 50.0%
ACAAGTAGCCGATGCTGCAA+GGG + chr1_1:17677268-17677287 Msa0011740:CDS 50.0%
TGTCACAGACACTCCACTTG+AGG + chr1_1:17677322-17677341 Msa0011740:CDS 50.0%
GTGAATGCCATCGCTGTTGT+TGG + chr1_1:17677731-17677750 Msa0011740:CDS 50.0%
GAAACGTCCAACAACAGCGA+TGG - chr1_1:17677741-17677760 None:intergenic 50.0%
CCCTGTTGTTCGCCTTATAC+AGG + chr1_1:17677920-17677939 Msa0011740:intron 50.0%
CCCTGTATAAGGCGAACAAC+AGG - chr1_1:17677924-17677943 None:intergenic 50.0%
GGAACTCCTTCACCACTAGA+TGG - chr1_1:17677983-17678002 None:intergenic 50.0%
GGGCATGTGCACAAGGAATT+CGG - chr1_1:17678004-17678023 None:intergenic 50.0%
AGGGAATTGGAGCCATTGCA+GGG - chr1_1:17678025-17678044 None:intergenic 50.0%
AAGGGAATTGGAGCCATTGC+AGG - chr1_1:17678026-17678045 None:intergenic 50.0%
GGGACTTAGAGATAGGCTCA+AGG - chr1_1:17678045-17678064 None:intergenic 50.0%
GCACAGGCACTTCTGATTGA+AGG + chr1_1:17678149-17678168 Msa0011740:intron 50.0%
TGGATTCTGTAGTCCTTCCC+AGG + chr1_1:17678758-17678777 Msa0011740:CDS 50.0%
GGATTCTGTAGTCCTTCCCA+GGG + chr1_1:17678759-17678778 Msa0011740:CDS 50.0%
AGGGAAAGCTTTCAGGATGG+AGG + chr1_1:17680160-17680179 Msa0011740:intron 50.0%
GGGAAAGCTTTCAGGATGGA+GGG + chr1_1:17680161-17680180 Msa0011740:intron 50.0%
CAAAACCCCTATCTGGAAGG+GGG + chr1_1:17680549-17680568 Msa0011740:intron 50.0%
AAAACCCCTATCTGGAAGGG+GGG + chr1_1:17680550-17680569 Msa0011740:intron 50.0%
AAATCCCCCCTTCCAGATAG+GGG - chr1_1:17680557-17680576 None:intergenic 50.0%
!!! TTTGGAGGGAGGTTTTGGAG+TGG - chr1_1:17680744-17680763 None:intergenic 50.0%
!! AGCTTTTGGTCTAAAGCCCG+AGG + chr1_1:17681386-17681405 Msa0011740:intron 50.0%
! GTCTAAAGCCCGAGGTTTCT+AGG + chr1_1:17681394-17681413 Msa0011740:intron 50.0%
TGAGACAGCCCTAGAAACCT+CGG - chr1_1:17681406-17681425 None:intergenic 50.0%
CAGCACAACATAACTGCAGC+AGG + chr1_1:17681462-17681481 Msa0011740:intron 50.0%
TGCAGCTTCAAGCTTTACGG+TGG - chr1_1:17681520-17681539 None:intergenic 50.0%
GAATGTGAAGTTAGGGGGGT+AGG - chr1_1:17681693-17681712 None:intergenic 50.0%
TTTGCCGGCGAGTTACTTCA+TGG + chr1_1:17682578-17682597 Msa0011740:CDS 50.0%
AGCACCATGAAGTAACTCGC+CGG - chr1_1:17682585-17682604 None:intergenic 50.0%
TACGCTGCAACACTAATGCG+TGG + chr1_1:17682951-17682970 Msa0011740:intron 50.0%
GTTCGTGTCGCAAAGCTCTT+AGG + chr1_1:17683837-17683856 Msa0011740:CDS 50.0%
TAAGTATCATGCGCCCCACT+TGG + chr1_1:17684512-17684531 Msa0011740:intron 50.0%
CATTCCCCACTCCCCATAAA+AGG + chr1_1:17685146-17685165 Msa0011740:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_1:17685230-17685249 Msa0011740:intron 50.0%
AGAGAAGACATTGGGAGGAG+AGG + chr1_1:17685301-17685320 Msa0011740:intron 50.0%
GAGAAGACATTGGGAGGAGA+GGG + chr1_1:17685302-17685321 Msa0011740:intron 50.0%
TTGAGTTCCCCCAAATGAGG+GGG - chr1_1:17685363-17685382 None:intergenic 50.0%
! ATTGCATTGGGGGAGGGTTT+TGG + chr1_1:17685385-17685404 Msa0011740:intron 50.0%
! TTGCATTGGGGGAGGGTTTT+GGG + chr1_1:17685386-17685405 Msa0011740:intron 50.0%
! CTTTGTTTGGGAGCTTGGAG+GGG - chr1_1:17685598-17685617 None:intergenic 50.0%
!! GCTTTGTTTGGGAGCTTGGA+GGG - chr1_1:17685599-17685618 None:intergenic 50.0%
! GGATTGGTAGGGTGAAGTTC+TGG - chr1_1:17685937-17685956 None:intergenic 50.0%
TGTTTAGAAGGGCAGGGGAA+AGG + chr1_1:17686063-17686082 Msa0011740:intron 50.0%
GTTTAGAAGGGCAGGGGAAA+GGG + chr1_1:17686064-17686083 Msa0011740:intron 50.0%
TTTAGAAGGGCAGGGGAAAG+GGG + chr1_1:17686065-17686084 Msa0011740:intron 50.0%
AGAAGGAGAGAGTGACAGAG+TGG + chr1_1:17686114-17686133 Msa0011740:intron 50.0%
GAGAGAGTGACAGAGTGGAA+GGG + chr1_1:17686119-17686138 Msa0011740:intron 50.0%
TGGTGGAAGATAGCGTGGAA+AGG + chr1_1:17686186-17686205 Msa0011740:intron 50.0%
GGTGGAAGATAGCGTGGAAA+GGG + chr1_1:17686187-17686206 Msa0011740:intron 50.0%
!! AGTGTGATGATAGTGCCGAC+TGG + chr1_1:17675544-17675563 Msa0011740:CDS 50.0%
!! ATGATAGTGCCGACTGGAAC+TGG + chr1_1:17675550-17675569 Msa0011740:CDS 50.0%
ACCAGCAAACCCACCAATAG+CGG - chr1_1:17675578-17675597 None:intergenic 50.0%
AACTCACACACAGGAGTGGA+GGG - chr1_1:17687002-17687021 None:intergenic 50.0%
AAACTCACACACAGGAGTGG+AGG - chr1_1:17687003-17687022 None:intergenic 50.0%
GCTCTTGACAGATTCGCAGA+AGG + chr1_1:17687514-17687533 Msa0011740:CDS 50.0%
ACAGATTCGCAGAAGGGTCA+TGG + chr1_1:17687521-17687540 Msa0011740:CDS 50.0%
CAGATTCGCAGAAGGGTCAT+GGG + chr1_1:17687522-17687541 Msa0011740:CDS 50.0%
TTCTGCAACAGGCAATCCGA+GGG - chr1_1:17687794-17687813 None:intergenic 50.0%
ATTCTGCAACAGGCAATCCG+AGG - chr1_1:17687795-17687814 None:intergenic 50.0%
TGTCACAGACACTCCACTTG+AGG + chr1_1:17677322-17677341 Msa0011740:CDS 50.0%
GTGAATGCCATCGCTGTTGT+TGG + chr1_1:17677731-17677750 Msa0011740:CDS 50.0%
GAAACGTCCAACAACAGCGA+TGG - chr1_1:17677741-17677760 None:intergenic 50.0%
CCCTGTTGTTCGCCTTATAC+AGG + chr1_1:17677920-17677939 Msa0011740:intron 50.0%
CCCTGTATAAGGCGAACAAC+AGG - chr1_1:17677924-17677943 None:intergenic 50.0%
GGAACTCCTTCACCACTAGA+TGG - chr1_1:17677983-17678002 None:intergenic 50.0%
! ATTGCAGGAGCATGTGCACA+AGG - chr1_1:17688513-17688532 None:intergenic 50.0%
AGGGGAATTGGAGTCATTGC+AGG - chr1_1:17688528-17688547 None:intergenic 50.0%
AGAGATAGGCTCAGGGGAAT+TGG - chr1_1:17688540-17688559 None:intergenic 50.0%
GGACTTAGAGATAGGCTCAG+GGG - chr1_1:17688546-17688565 None:intergenic 50.0%
GGGACTTAGAGATAGGCTCA+GGG - chr1_1:17678045-17678064 None:intergenic 50.0%
TGGGACTTAGAGATAGGCTC+AGG - chr1_1:17678046-17678065 None:intergenic 50.0%
AAGTCCCAAATCAGCAGCTG+AGG + chr1_1:17688560-17688579 Msa0011740:CDS 50.0%
!! ACCTCCTCAGCTGCTGATTT+GGG - chr1_1:17688567-17688586 None:intergenic 50.0%
! AACCTCCTCAGCTGCTGATT+TGG - chr1_1:17688568-17688587 None:intergenic 50.0%
! GCACCGACACTTCTGATTGA+AGG + chr1_1:17688651-17688670 Msa0011740:intron 50.0%
! CGTCAGTGTTGTATTGGCGT+CGG - chr1_1:17688712-17688731 None:intergenic 50.0%
TTTCTGCCATGTGTGCTAGC+TGG + chr1_1:17689197-17689216 Msa0011740:CDS 50.0%
! GAGTGCATCGCCAAGTATTG+TGG - chr1_1:17689236-17689255 None:intergenic 50.0%
GGCGATGCACTCTGAATCAA+TGG + chr1_1:17689244-17689263 Msa0011740:CDS 50.0%
TTCCCAGAGATGCTTGTGGA+GGG + chr1_1:17689309-17689328 Msa0011740:CDS 50.0%
GGGAAAGCTTTCAGGATGGA+TGG + chr1_1:17680161-17680180 Msa0011740:intron 50.0%
CAAAACCCCTATCTGGAAGG+GGG + chr1_1:17680549-17680568 Msa0011740:intron 50.0%
AAAACCCCTATCTGGAAGGG+GGG + chr1_1:17680550-17680569 Msa0011740:intron 50.0%
AAATCCCCCCTTCCAGATAG+GGG - chr1_1:17680557-17680576 None:intergenic 50.0%
!!! AGGGAAGTTTTGGAGTGGAG+GGG - chr1_1:17691268-17691287 None:intergenic 50.0%
!!! GAGGGAAGTTTTGGAGTGGA+GGG - chr1_1:17691269-17691288 None:intergenic 50.0%
!! AGCTTTTGGTCTAAAGCCCG+AGG + chr1_1:17681386-17681405 Msa0011740:intron 50.0%
! GTCTAAAGCCCGAGGTTTCT+AGG + chr1_1:17681394-17681413 Msa0011740:intron 50.0%
TGAGACAGCCCTAGAAACCT+CGG - chr1_1:17681406-17681425 None:intergenic 50.0%
CAGCACAACATAACTGCAGC+AGG + chr1_1:17681462-17681481 Msa0011740:intron 50.0%
TGCAGCTTCAAGCTTTACGG+TGG - chr1_1:17681520-17681539 None:intergenic 50.0%
GAATGTGAAGTTAGGGGGGT+AGG - chr1_1:17681693-17681712 None:intergenic 50.0%
TTTGCCGGCGAGTTACTTCA+TGG + chr1_1:17682578-17682597 Msa0011740:CDS 50.0%
AGCACCATGAAGTAACTCGC+CGG - chr1_1:17682585-17682604 None:intergenic 50.0%
TACGCTGCAACACTAATGCG+TGG + chr1_1:17682951-17682970 Msa0011740:intron 50.0%
GTTCGTGTCGCAAAGCTCTT+AGG + chr1_1:17683837-17683856 Msa0011740:CDS 50.0%
TAAGTATCATGCGCCCCACT+TGG + chr1_1:17684512-17684531 Msa0011740:intron 50.0%
CATTCCCCACTCCCCATAAA+AGG + chr1_1:17685146-17685165 Msa0011740:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_1:17685230-17685249 Msa0011740:intron 50.0%
AGAGAAGACATTGGGAGGAG+AGG + chr1_1:17685301-17685320 Msa0011740:intron 50.0%
GAGAAGACATTGGGAGGAGA+GGG + chr1_1:17685302-17685321 Msa0011740:intron 50.0%
TTGAGTTCCCCCAAATGAGG+GGG - chr1_1:17685363-17685382 None:intergenic 50.0%
! ATTGCATTGGGGGAGGGTTT+TGG + chr1_1:17685385-17685404 Msa0011740:intron 50.0%
! TTGCATTGGGGGAGGGTTTT+GGG + chr1_1:17685386-17685405 Msa0011740:intron 50.0%
!!! AGGGTTTTGGGGAGTTATGG+AGG + chr1_1:17695927-17695946 Msa0011740:intron 50.0%
!!! GGGTTTTGGGGAGTTATGGA+GGG + chr1_1:17695928-17695947 Msa0011740:intron 50.0%
! CTTTGTTTGGGAGCTTGGAG+GGG - chr1_1:17685598-17685617 None:intergenic 50.0%
!! GCTTTGTTTGGGAGCTTGGA+GGG - chr1_1:17685599-17685618 None:intergenic 50.0%
! GGATTGGTAGGGTGAAGTTC+TGG - chr1_1:17685937-17685956 None:intergenic 50.0%
TGTTTAGAAGGGCAGGGGAA+GGG + chr1_1:17686063-17686082 Msa0011740:intron 50.0%
AGAAGGAGAGAGTGACAGAG+TGG + chr1_1:17686114-17686133 Msa0011740:intron 50.0%
GAGAGAGTGACAGAGTGGAA+GGG + chr1_1:17686119-17686138 Msa0011740:intron 50.0%
TGGTGGAAGATAGCGTGGAA+AGG + chr1_1:17686186-17686205 Msa0011740:intron 50.0%
GGTGGAAGATAGCGTGGAAA+GGG + chr1_1:17686187-17686206 Msa0011740:intron 50.0%
GGTGCCCAAGTGATTGTAAG+CGG + chr1_1:17697119-17697138 Msa0011740:CDS 50.0%
CTCCTCCGCTTACAATCACT+TGG - chr1_1:17697127-17697146 None:intergenic 50.0%
ATTGTAAGCGGAGGAGCAGT+AGG + chr1_1:17697131-17697150 Msa0011740:CDS 50.0%
CGACCAAACCCAGATGATCT+TGG + chr1_1:17697510-17697529 Msa0011740:CDS 50.0%
ACGATCCCGTATGTTTGCAG+AGG - chr1_1:17697912-17697931 None:intergenic 50.0%
ATTTCAGTTGCTGCAGCTCC+AGG - chr1_1:17698049-17698068 None:intergenic 50.0%
AGCATACCCTGTCTCCTTGA+AGG - chr1_1:17698101-17698120 None:intergenic 50.0%
TCGTGGCCTGATAAAGGTGA+GGG - chr1_1:17698391-17698410 None:intergenic 50.0%
TCACCTTTATCAGGCCACGA+GGG + chr1_1:17698391-17698410 Msa0011740:intron 50.0%
GCATTCTCCGCCAATGTTCT+AGG - chr1_1:17698913-17698932 None:intergenic 50.0%
AGAACATTGGCGGAGAATGC+TGG + chr1_1:17698913-17698932 Msa0011740:CDS 50.0%
GAACATTGGCGGAGAATGCT+GGG + chr1_1:17698914-17698933 Msa0011740:CDS 50.0%
CTCTACGCAGAACATGCATC+AGG + chr1_1:17698964-17698983 Msa0011740:CDS 50.0%
GTGGAGATCCCAAACATGTG+TGG - chr1_1:17699043-17699062 None:intergenic 50.0%
TGCTGCATGCACTGTACTAC+GGG + chr1_1:17699369-17699388 Msa0011740:CDS 50.0%
GAGAGTAGGCCCTATATGGA+AGG + chr1_1:17699897-17699916 Msa0011740:intron 50.0%
AAGTGGGGTAAGCTACATGG+AGG - chr1_1:17700501-17700520 None:intergenic 50.0%
ACCCCACTTAGTGGGATGAT+TGG + chr1_1:17700512-17700531 Msa0011740:intron 50.0%
CCCAATCATCCCACTAAGTG+GGG - chr1_1:17700516-17700535 None:intergenic 50.0%
CCCCACTTAGTGGGATGATT+GGG + chr1_1:17700513-17700532 Msa0011740:intron 50.0%
GCCAAGATGCCAAGTGTAGT+AGG - chr1_1:17700770-17700789 None:intergenic 50.0%
TACACTTGGCATCTTGGCCT+GGG + chr1_1:17700772-17700791 Msa0011740:three_prime_UTR 50.0%
ATAGCGGCTCCAGTTCCAGT+CGG - chr1_1:17675562-17675581 None:intergenic 55.0%
ACTGGAACTGGAGCCGCTAT+TGG + chr1_1:17675562-17675581 Msa0011740:CDS 55.0%
GAACTGGAGCCGCTATTGGT+GGG + chr1_1:17675566-17675585 Msa0011740:CDS 55.0%
! GAAGAGAGAGCACGAGCAAC+AGG - chr1_1:17675610-17675629 None:intergenic 55.0%
!! CACTCGTATGATAGTGGCGG+AGG - chr1_1:17676402-17676421 None:intergenic 55.0%
ACAGGGAGTAGACCTACTGG+CGG + chr1_1:17677938-17677957 Msa0011740:intron 55.0%
! ATTGCAGGGGCATGTGCACA+AGG - chr1_1:17678011-17678030 None:intergenic 55.0%
TTGTGCACATGCCCCTGCAA+TGG + chr1_1:17678010-17678029 Msa0011740:intron 55.0%
GGGAATTGGAGCCATTGCAG+GGG - chr1_1:17678024-17678043 None:intergenic 55.0%
AAGTCCCAAATCAGCAGCCG+AGG + chr1_1:17678058-17678077 Msa0011740:intron 55.0%
!! ACCTCCTCGGCTGCTGATTT+GGG - chr1_1:17678065-17678084 None:intergenic 55.0%
! AACCTCCTCGGCTGCTGATT+TGG - chr1_1:17678066-17678085 None:intergenic 55.0%
TTCCCAGGGATGCTTGTGGA+GGG + chr1_1:17678773-17678792 Msa0011740:CDS 55.0%
TACGCACATGTGTCTGCCGT+CGG - chr1_1:17680272-17680291 None:intergenic 55.0%
!!! GAGGTTTTGGAGTGGAGGAG+AGG - chr1_1:17680736-17680755 None:intergenic 55.0%
GAGACAGCCCTAGAAACCTC+GGG - chr1_1:17681405-17681424 None:intergenic 55.0%
!! TGCGGGTGATAGTGGAGAGT+TGG - chr1_1:17681647-17681666 None:intergenic 55.0%
ACTATCACCCGCACTTCCCT+CGG + chr1_1:17681654-17681673 Msa0011740:CDS 55.0%
AGGGTTACCATTGGGACCGA+GGG - chr1_1:17681673-17681692 None:intergenic 55.0%
TAGGGTTACCATTGGGACCG+AGG - chr1_1:17681674-17681693 None:intergenic 55.0%
AGGGGGGTAGGGTTACCATT+GGG - chr1_1:17681681-17681700 None:intergenic 55.0%
TAGGGGGGTAGGGTTACCAT+TGG - chr1_1:17681682-17681701 None:intergenic 55.0%
GGCTGGGAAAGCTCAACAAG+AGG + chr1_1:17682523-17682542 Msa0011740:CDS 55.0%
CGTGTCGCAAAGCTCTTAGG+AGG + chr1_1:17683840-17683859 Msa0011740:CDS 55.0%
GTCGCAAAGCTCTTAGGAGG+AGG + chr1_1:17683843-17683862 Msa0011740:CDS 55.0%
! TAGGTGGCTGTGTTTGCTGG+TGG + chr1_1:17684947-17684966 Msa0011740:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr1_1:17685235-17685254 Msa0011740:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr1_1:17685236-17685255 Msa0011740:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr1_1:17685237-17685256 Msa0011740:intron 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr1_1:17685308-17685327 Msa0011740:intron 55.0%
! TGCATTGGGGGAGGGTTTTG+GGG + chr1_1:17685387-17685406 Msa0011740:intron 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + chr1_1:17685398-17685417 Msa0011740:intron 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + chr1_1:17685399-17685418 Msa0011740:intron 55.0%
TTTGGGAGCTTGGAGGGGAA+GGG - chr1_1:17685593-17685612 None:intergenic 55.0%
!! GGCTTTGTTTGGGAGCTTGG+AGG - chr1_1:17685600-17685619 None:intergenic 55.0%
! AAGGAGAGAGTGCAGGGGAA+GGG + chr1_1:17686090-17686109 Msa0011740:intron 55.0%
GGAGAGAGTGACAGAGTGGA+AGG + chr1_1:17686118-17686137 Msa0011740:intron 55.0%
! AAGGGAGCAGTGCTTGGTGA+TGG + chr1_1:17686137-17686156 Msa0011740:intron 55.0%
!! TGCTTGGTGATGGAGGTGGA+GGG + chr1_1:17686147-17686166 Msa0011740:intron 55.0%
ATAGCGGCTCCAGTTCCAGT+CGG - chr1_1:17675562-17675581 None:intergenic 55.0%
ACTGGAACTGGAGCCGCTAT+TGG + chr1_1:17675562-17675581 Msa0011740:CDS 55.0%
GAACTGGAGCCGCTATTGGT+GGG + chr1_1:17675566-17675585 Msa0011740:CDS 55.0%
! GAAGAGAGAGCACGAGCAAC+AGG - chr1_1:17675610-17675629 None:intergenic 55.0%
!! TCTGTTTGGTTCTGCGGTGG+TGG + chr1_1:17686814-17686833 Msa0011740:intron 55.0%
ACTCACACACAGGAGTGGAG+GGG - chr1_1:17687001-17687020 None:intergenic 55.0%
TACAGGTAGCCGATGCTGCA+AGG + chr1_1:17687764-17687783 Msa0011740:CDS 55.0%
ACAGGTAGCCGATGCTGCAA+GGG + chr1_1:17687765-17687784 Msa0011740:CDS 55.0%
ACAGGGAGTAGACCTACTGG+CGG + chr1_1:17677938-17677957 Msa0011740:intron 55.0%
TCCCAAATCAGCAGCTGAGG+AGG + chr1_1:17688563-17688582 Msa0011740:CDS 55.0%
GTCCTTCCCAGAGATGCTTG+TGG + chr1_1:17689305-17689324 Msa0011740:CDS 55.0%
! CTCCACAAGCATCTCTGGGA+AGG - chr1_1:17689310-17689329 None:intergenic 55.0%
CTTCCCAGAGATGCTTGTGG+AGG + chr1_1:17689308-17689327 Msa0011740:CDS 55.0%
TCCCAGAGATGCTTGTGGAG+GGG + chr1_1:17689310-17689329 Msa0011740:CDS 55.0%
TCCCCTCCACAAGCATCTCT+GGG - chr1_1:17689314-17689333 None:intergenic 55.0%
AGAGATGCTTGTGGAGGGGA+CGG + chr1_1:17689314-17689333 Msa0011740:CDS 55.0%
!!! GAAGTTTTGGAGTGGAGGGG+AGG - chr1_1:17691265-17691284 None:intergenic 55.0%
!!! GGAGGGAAGTTTTGGAGTGG+AGG - chr1_1:17691270-17691289 None:intergenic 55.0%
GAGACAGCCCTAGAAACCTC+GGG - chr1_1:17681405-17681424 None:intergenic 55.0%
!! TGCGGGTGATAGTGGAGAGT+TGG - chr1_1:17681647-17681666 None:intergenic 55.0%
ACTATCACCCGCACTTCCCT+CGG + chr1_1:17681654-17681673 Msa0011740:CDS 55.0%
AGGGTTACCATTGGGACCGA+GGG - chr1_1:17681673-17681692 None:intergenic 55.0%
TAGGGTTACCATTGGGACCG+AGG - chr1_1:17681674-17681693 None:intergenic 55.0%
AGGGGGGTAGGGTTACCATT+GGG - chr1_1:17681681-17681700 None:intergenic 55.0%
TAGGGGGGTAGGGTTACCAT+TGG - chr1_1:17681682-17681701 None:intergenic 55.0%
GGCTGGGAAAGCTCAACAAG+AGG + chr1_1:17682523-17682542 Msa0011740:CDS 55.0%
CGTGTCGCAAAGCTCTTAGG+AGG + chr1_1:17683840-17683859 Msa0011740:CDS 55.0%
GTCGCAAAGCTCTTAGGAGG+AGG + chr1_1:17683843-17683862 Msa0011740:CDS 55.0%
! TAGGTGGCTGTGTTTGCTGG+TGG + chr1_1:17684947-17684966 Msa0011740:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr1_1:17685235-17685254 Msa0011740:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr1_1:17685236-17685255 Msa0011740:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr1_1:17685237-17685256 Msa0011740:intron 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr1_1:17685308-17685327 Msa0011740:intron 55.0%
! TGCATTGGGGGAGGGTTTTG+GGG + chr1_1:17685387-17685406 Msa0011740:intron 55.0%
!!! GGGAGGGTTTTGGGGAGTTA+TGG + chr1_1:17695924-17695943 Msa0011740:intron 55.0%
TTTGGGAGCTTGGAGGGGAA+GGG - chr1_1:17685593-17685612 None:intergenic 55.0%
!! GGCTTTGTTTGGGAGCTTGG+AGG - chr1_1:17685600-17685619 None:intergenic 55.0%
GTGTTTAGAAGGGCAGGGGA+AGG + chr1_1:17686062-17686081 Msa0011740:intron 55.0%
GTTTAGAAGGGCAGGGGAAG+GGG + chr1_1:17696593-17696612 Msa0011740:intron 55.0%
! AAGGAGAGAGTGCAGGGGAA+GGG + chr1_1:17686090-17686109 Msa0011740:intron 55.0%
GGAGAGAGTGACAGAGTGGA+AGG + chr1_1:17686118-17686137 Msa0011740:intron 55.0%
! AAGGGAGCAGTGCTTGGTGA+TGG + chr1_1:17686137-17686156 Msa0011740:intron 55.0%
!! TGCTTGGTGATGGAGGAGGA+GGG + chr1_1:17696675-17696694 Msa0011740:intron 55.0%
GCCCAAGTGATTGTAAGCGG+AGG + chr1_1:17697122-17697141 Msa0011740:CDS 55.0%
!!! CGTCGATTTTGCCGTACGAC+TGG + chr1_1:17697381-17697400 Msa0011740:CDS 55.0%
AGGGATAGCCGTATTGTGCC+TGG + chr1_1:17698028-17698047 Msa0011740:CDS 55.0%
CTGCAGCTCCAGGCACAATA+CGG - chr1_1:17698039-17698058 None:intergenic 55.0%
ACGGGTGGCCCAACGAATAT+GGG - chr1_1:17698272-17698291 None:intergenic 55.0%
AACGGGTGGCCCAACGAATA+TGG - chr1_1:17698273-17698292 None:intergenic 55.0%
!! CAATGTGGCCTGATAACGGG+TGG - chr1_1:17698287-17698306 None:intergenic 55.0%
CTCGTGGCCTGATAAAGGTG+AGG - chr1_1:17698392-17698411 None:intergenic 55.0%
CTCACCTTTATCAGGCCACG+AGG + chr1_1:17698390-17698409 Msa0011740:intron 55.0%
AGACCCTCGTGGCCTGATAA+AGG - chr1_1:17698397-17698416 None:intergenic 55.0%
! GTGGGTGGTCTGATGGATCT+AGG - chr1_1:17698587-17698606 None:intergenic 55.0%
TGCATGCACTGTACTACGGG+TGG + chr1_1:17699372-17699391 Msa0011740:CDS 55.0%
GGAAGGCTTGCGTACTCATG+GGG - chr1_1:17699666-17699685 None:intergenic 55.0%
GGGAAGGCTTGCGTACTCAT+GGG - chr1_1:17699667-17699686 None:intergenic 55.0%
TGGGAAGGCTTGCGTACTCA+TGG - chr1_1:17699668-17699687 None:intergenic 55.0%
! TGCGGAAGCTGAGTTGAGAG+AGG + chr1_1:17699955-17699974 Msa0011740:intron 55.0%
! GCGGAAGCTGAGTTGAGAGA+GGG + chr1_1:17699956-17699975 Msa0011740:intron 55.0%
AAGGCCCCCTCACCAATCAA+TGG - chr1_1:17700068-17700087 None:intergenic 55.0%
! GTGAGGGGGCCTTAGACTTT+TGG + chr1_1:17700075-17700094 Msa0011740:intron 55.0%
ATTATGGCGAAACCGGCTGG+AGG + chr1_1:17700649-17700668 Msa0011740:CDS 55.0%
TAGTCTTCGTCCATGCCAGC+AGG - chr1_1:17700694-17700713 None:intergenic 55.0%
CTACACTTGGCATCTTGGCC+TGG + chr1_1:17700771-17700790 Msa0011740:three_prime_UTR 55.0%
GGAACTGGAGCCGCTATTGG+TGG + chr1_1:17675565-17675584 Msa0011740:CDS 60.0%
!! GCCGCTATTGGTGGGTTTGC+TGG + chr1_1:17675574-17675593 Msa0011740:CDS 60.0%
GAGGGAAGCCCTTGCAGCAT+CGG - chr1_1:17677279-17677298 None:intergenic 60.0%
GATGCTGCAAGGGCTTCCCT+CGG + chr1_1:17677278-17677297 Msa0011740:CDS 60.0%
CAGGGAGTAGACCTACTGGC+GGG + chr1_1:17677939-17677958 Msa0011740:intron 60.0%
AGACCTACTGGCGGGAGTTG+AGG + chr1_1:17677947-17677966 Msa0011740:CDS 60.0%
TCCCAAATCAGCAGCCGAGG+AGG + chr1_1:17678061-17678080 Msa0011740:intron 60.0%
CTGAGGCCAGCTAGCACACA+TGG - chr1_1:17678670-17678689 None:intergenic 60.0%
GTCCTTCCCAGGGATGCTTG+TGG + chr1_1:17678769-17678788 Msa0011740:CDS 60.0%
CTCCACAAGCATCCCTGGGA+AGG - chr1_1:17678774-17678793 None:intergenic 60.0%
CTTCCCAGGGATGCTTGTGG+AGG + chr1_1:17678772-17678791 Msa0011740:CDS 60.0%
TCCCAGGGATGCTTGTGGAG+GGG + chr1_1:17678774-17678793 Msa0011740:CDS 60.0%
TCCCCTCCACAAGCATCCCT+GGG - chr1_1:17678778-17678797 None:intergenic 60.0%
AGGGATGCTTGTGGAGGGGA+CGG + chr1_1:17678778-17678797 Msa0011740:CDS 60.0%
!!! GGAGGGAGGTTTTGGAGTGG+AGG - chr1_1:17680741-17680760 None:intergenic 60.0%
! GAGGGAAGTGCGGGTGATAG+TGG - chr1_1:17681655-17681674 None:intergenic 60.0%
! ATTGGGACCGAGGGAAGTGC+GGG - chr1_1:17681664-17681683 None:intergenic 60.0%
CATTGGGACCGAGGGAAGTG+CGG - chr1_1:17681665-17681684 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr1_1:17685311-17685330 Msa0011740:intron 60.0%
!! GCATTGGGGGAGGGTTTTGG+GGG + chr1_1:17685388-17685407 Msa0011740:intron 60.0%
!!! CATTGGGGGAGGGTTTTGGG+GGG + chr1_1:17685389-17685408 Msa0011740:intron 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + chr1_1:17685395-17685414 Msa0011740:intron 60.0%
GTTTGGGAGCTTGGAGGGGA+AGG - chr1_1:17685594-17685613 None:intergenic 60.0%
TGGGGCAGTGAGTAAGCCTC+TGG + chr1_1:17685654-17685673 Msa0011740:intron 60.0%
! AGGGGAGAAGGAGAGAGTGC+AGG + chr1_1:17686083-17686102 Msa0011740:intron 60.0%
! GGGGAGAAGGAGAGAGTGCA+GGG + chr1_1:17686084-17686103 Msa0011740:intron 60.0%
! GGGAGAAGGAGAGAGTGCAG+GGG + chr1_1:17686085-17686104 Msa0011740:intron 60.0%
! GAAGGAGAGAGTGCAGGGGA+AGG + chr1_1:17686089-17686108 Msa0011740:intron 60.0%
! AGGAGAGAGTGCAGGGGAAG+GGG + chr1_1:17686091-17686110 Msa0011740:intron 60.0%
GAGTGGAAGGGAGCAGTGCT+TGG + chr1_1:17686131-17686150 Msa0011740:intron 60.0%
!! GGAGCAGTGCTTGGTGATGG+AGG + chr1_1:17686140-17686159 Msa0011740:intron 60.0%
!! GCAGTGCTTGGTGATGGAGG+TGG + chr1_1:17686143-17686162 Msa0011740:intron 60.0%
!! GTGCTTGGTGATGGAGGTGG+AGG + chr1_1:17686146-17686165 Msa0011740:intron 60.0%
!! GCTTGGTGATGGAGGTGGAG+GGG + chr1_1:17686148-17686167 Msa0011740:intron 60.0%
GGAACTGGAGCCGCTATTGG+TGG + chr1_1:17675565-17675584 Msa0011740:CDS 60.0%
!! GCCGCTATTGGTGGGTTTGC+TGG + chr1_1:17675574-17675593 Msa0011740:CDS 60.0%
!! GCGTCTGTTTGGTTCTGCGG+TGG + chr1_1:17686811-17686830 Msa0011740:intron 60.0%
!! TTTGGTTCTGCGGTGGTGGC+TGG + chr1_1:17686818-17686837 Msa0011740:intron 60.0%
GTTAGGCTGGACGTCGTGAC+CGG + chr1_1:17686961-17686980 Msa0011740:intron 60.0%
TTAGGCTGGACGTCGTGACC+GGG + chr1_1:17686962-17686981 Msa0011740:intron 60.0%
GAGGGAAGCCCTTGCAGCAT+CGG - chr1_1:17677279-17677298 None:intergenic 60.0%
GATGCTGCAAGGGCTTCCCT+CGG + chr1_1:17677278-17677297 Msa0011740:CDS 60.0%
CAGGGAGTAGACCTACTGGC+GGG + chr1_1:17677939-17677958 Msa0011740:intron 60.0%
AGACCTACTGGCGGGAGTTG+AGG + chr1_1:17677947-17677966 Msa0011740:CDS 60.0%
CTGAGGCCAGCTAGCACACA+TGG - chr1_1:17678670-17678689 None:intergenic 60.0%
GTCCCCTCCACAAGCATCTC+TGG - chr1_1:17689315-17689334 None:intergenic 60.0%
GAGATGCTTGTGGAGGGGAC+GGG + chr1_1:17689315-17689334 Msa0011740:CDS 60.0%
TACGCACACGTGTCTGCCGT+CGG - chr1_1:17690801-17690820 None:intergenic 60.0%
! GAGGGAAGTGCGGGTGATAG+TGG - chr1_1:17681655-17681674 None:intergenic 60.0%
! ATTGGGACCGAGGGAAGTGC+GGG - chr1_1:17681664-17681683 None:intergenic 60.0%
CATTGGGACCGAGGGAAGTG+CGG - chr1_1:17681665-17681684 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr1_1:17685311-17685330 Msa0011740:intron 60.0%
GTTTGGGAGCTTGGAGGGGA+AGG - chr1_1:17685594-17685613 None:intergenic 60.0%
TGGGGCAGTGAGTAAGCCTC+TGG + chr1_1:17685654-17685673 Msa0011740:intron 60.0%
! AGGGGAGAAGGAGAGAGTGC+AGG + chr1_1:17686083-17686102 Msa0011740:intron 60.0%
! GGGGAGAAGGAGAGAGTGCA+GGG + chr1_1:17686084-17686103 Msa0011740:intron 60.0%
! GGGAGAAGGAGAGAGTGCAG+GGG + chr1_1:17686085-17686104 Msa0011740:intron 60.0%
! GAAGGAGAGAGTGCAGGGGA+AGG + chr1_1:17686089-17686108 Msa0011740:intron 60.0%
! AGGAGAGAGTGCAGGGGAAG+GGG + chr1_1:17686091-17686110 Msa0011740:intron 60.0%
GAGTGGAAGGGAGCAGTGCT+TGG + chr1_1:17686131-17686150 Msa0011740:intron 60.0%
!! GGAGCAGTGCTTGGTGATGG+AGG + chr1_1:17686140-17686159 Msa0011740:intron 60.0%
!! GCAGTGCTTGGTGATGGAGG+AGG + chr1_1:17686143-17686162 Msa0011740:intron 60.0%
!! GTGCTTGGTGATGGAGGAGG+AGG + chr1_1:17696674-17696693 Msa0011740:intron 60.0%
!! GCTTGGTGATGGAGGAGGAG+GGG + chr1_1:17696676-17696695 Msa0011740:intron 60.0%
CGGAGGAGCAGTAGGAGAGA+TGG + chr1_1:17697139-17697158 Msa0011740:CDS 60.0%
TCGTTGGGCCACCCGTTATC+AGG + chr1_1:17698276-17698295 Msa0011740:intron 60.0%
CACTGTACTACGGGTGGACC+AGG + chr1_1:17699378-17699397 Msa0011740:CDS 60.0%
GCAGGTTGCTCTCTCTTGCC+AGG - chr1_1:17700676-17700695 None:intergenic 60.0%
GGCAAGAGAGAGCAACCTGC+TGG + chr1_1:17700676-17700695 Msa0011740:CDS 60.0%
GAGAGAGCAACCTGCTGGCA+TGG + chr1_1:17700681-17700700 Msa0011740:CDS 60.0%
CAGCCTCAACTCCCGCCAGT+AGG - chr1_1:17677953-17677972 None:intergenic 65.0%
GTCCCCTCCACAAGCATCCC+TGG - chr1_1:17678779-17678798 None:intergenic 65.0%
GGGATGCTTGTGGAGGGGAC+GGG + chr1_1:17678779-17678798 Msa0011740:CDS 65.0%
CGCACTTCCCTCGGTCCCAA+TGG + chr1_1:17681663-17681682 Msa0011740:CDS 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr1_1:17685241-17685260 Msa0011740:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr1_1:17685242-17685261 Msa0011740:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - chr1_1:17685575-17685594 None:intergenic 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - chr1_1:17685576-17685595 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - chr1_1:17685577-17685596 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_1:17685584-17685603 None:intergenic 65.0%
GAGCTTGGAGGGGAAGGGAG+GGG - chr1_1:17685588-17685607 None:intergenic 65.0%
GGAGCTTGGAGGGGAAGGGA+GGG - chr1_1:17685589-17685608 None:intergenic 65.0%
AGGGCAGGGGAAAGGGGAGA+AGG + chr1_1:17686071-17686090 Msa0011740:intron 65.0%
GAGTGCAGGGGAAGGGGAGA+AGG + chr1_1:17686097-17686116 Msa0011740:intron 65.0%
TAGGCTGGACGTCGTGACCG+GGG + chr1_1:17686963-17686982 Msa0011740:intron 65.0%
ACACAGGAGTGGAGGGGCTG+GGG - chr1_1:17686995-17687014 None:intergenic 65.0%
CACACAGGAGTGGAGGGGCT+GGG - chr1_1:17686996-17687015 None:intergenic 65.0%
ACACACAGGAGTGGAGGGGC+TGG - chr1_1:17686997-17687016 None:intergenic 65.0%
CTGCCTCAACTCCCGCCAGT+AGG - chr1_1:17688455-17688474 None:intergenic 65.0%
CGCACTTCCCTCGGTCCCAA+TGG + chr1_1:17681663-17681682 Msa0011740:CDS 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr1_1:17685241-17685260 Msa0011740:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr1_1:17685242-17685261 Msa0011740:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - chr1_1:17685575-17685594 None:intergenic 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - chr1_1:17685576-17685595 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - chr1_1:17685577-17685596 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_1:17685584-17685603 None:intergenic 65.0%
GAGCTTGGAGGGGAAGGGAG+GGG - chr1_1:17685588-17685607 None:intergenic 65.0%
GGAGCTTGGAGGGGAAGGGA+GGG - chr1_1:17685589-17685608 None:intergenic 65.0%
AAGGGCAGGGGAAGGGGAGA+AGG + chr1_1:17696599-17696618 Msa0011740:intron 65.0%
GAGTGCAGGGGAAGGGGAGA+AGG + chr1_1:17686097-17686116 Msa0011740:intron 65.0%
CTCTTGCCAGGTCCTCCAGC+CGG - chr1_1:17700664-17700683 None:intergenic 65.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr1_1:17685240-17685259 Msa0011740:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr1_1:17685245-17685264 Msa0011740:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr1_1:17685246-17685265 Msa0011740:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + chr1_1:17685252-17685271 Msa0011740:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - chr1_1:17685570-17685589 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - chr1_1:17685574-17685593 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr1_1:17685578-17685597 None:intergenic 70.0%
CTTGGAGGGGAAGGGAGGGG+AGG - chr1_1:17685585-17685604 None:intergenic 70.0%
GGGAGCTTGGAGGGGAAGGG+AGG - chr1_1:17685590-17685609 None:intergenic 70.0%
AGGGGCTGGGGTTCGAACCC+CGG - chr1_1:17686983-17687002 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr1_1:17685240-17685259 Msa0011740:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr1_1:17685245-17685264 Msa0011740:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr1_1:17685246-17685265 Msa0011740:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + chr1_1:17685252-17685271 Msa0011740:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - chr1_1:17685570-17685589 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - chr1_1:17685574-17685593 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr1_1:17685578-17685597 None:intergenic 70.0%
CTTGGAGGGGAAGGGAGGGG+AGG - chr1_1:17685585-17685604 None:intergenic 70.0%
GGGAGCTTGGAGGGGAAGGG+AGG - chr1_1:17685590-17685609 None:intergenic 70.0%
GCGAAACCGGCTGGAGGACC+TGG + chr1_1:17700655-17700674 Msa0011740:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 17675248 17701116 17675248 ID=Msa0011740;Name=Msa0011740
chr1_1 mRNA 17675248 17701116 17675248 ID=Msa0011740-mRNA-1;Parent=Msa0011740;Name=Msa0011740-mRNA-1;_AED=0.19;_eAED=0.19;_QI=83|0.71|0.72|1|1|1|33|402|1433
chr1_1 exon 17675248 17675438 17675248 ID=Msa0011740-mRNA-1:exon:6444;Parent=Msa0011740-mRNA-1
chr1_1 exon 17675526 17675660 17675526 ID=Msa0011740-mRNA-1:exon:6445;Parent=Msa0011740-mRNA-1
chr1_1 exon 17676963 17677079 17676963 ID=Msa0011740-mRNA-1:exon:6446;Parent=Msa0011740-mRNA-1
chr1_1 exon 17677215 17677343 17677215 ID=Msa0011740-mRNA-1:exon:6447;Parent=Msa0011740-mRNA-1
chr1_1 exon 17677629 17677805 17677629 ID=Msa0011740-mRNA-1:exon:6448;Parent=Msa0011740-mRNA-1
chr1_1 exon 17677942 17678011 17677942 ID=Msa0011740-mRNA-1:exon:6449;Parent=Msa0011740-mRNA-1
chr1_1 exon 17678680 17678834 17678680 ID=Msa0011740-mRNA-1:exon:6450;Parent=Msa0011740-mRNA-1
chr1_1 exon 17679684 17679810 17679684 ID=Msa0011740-mRNA-1:exon:6451;Parent=Msa0011740-mRNA-1
chr1_1 exon 17681517 17681684 17681517 ID=Msa0011740-mRNA-1:exon:6452;Parent=Msa0011740-mRNA-1
chr1_1 exon 17682492 17682673 17682492 ID=Msa0011740-mRNA-1:exon:6453;Parent=Msa0011740-mRNA-1
chr1_1 exon 17683546 17683692 17683546 ID=Msa0011740-mRNA-1:exon:6454;Parent=Msa0011740-mRNA-1
chr1_1 exon 17683786 17683947 17683786 ID=Msa0011740-mRNA-1:exon:6455;Parent=Msa0011740-mRNA-1
chr1_1 exon 17684950 17685027 17684950 ID=Msa0011740-mRNA-1:exon:6456;Parent=Msa0011740-mRNA-1
chr1_1 exon 17686498 17686632 17686498 ID=Msa0011740-mRNA-1:exon:6457;Parent=Msa0011740-mRNA-1
chr1_1 exon 17687454 17687570 17687454 ID=Msa0011740-mRNA-1:exon:6458;Parent=Msa0011740-mRNA-1
chr1_1 exon 17687712 17687840 17687712 ID=Msa0011740-mRNA-1:exon:6459;Parent=Msa0011740-mRNA-1
chr1_1 exon 17688131 17688307 17688131 ID=Msa0011740-mRNA-1:exon:6460;Parent=Msa0011740-mRNA-1
chr1_1 exon 17688444 17688584 17688444 ID=Msa0011740-mRNA-1:exon:6461;Parent=Msa0011740-mRNA-1
chr1_1 exon 17689185 17689370 17689185 ID=Msa0011740-mRNA-1:exon:6462;Parent=Msa0011740-mRNA-1
chr1_1 exon 17690213 17690339 17690213 ID=Msa0011740-mRNA-1:exon:6463;Parent=Msa0011740-mRNA-1
chr1_1 exon 17692045 17692212 17692045 ID=Msa0011740-mRNA-1:exon:6464;Parent=Msa0011740-mRNA-1
chr1_1 exon 17693020 17693201 17693020 ID=Msa0011740-mRNA-1:exon:6465;Parent=Msa0011740-mRNA-1
chr1_1 exon 17694075 17694221 17694075 ID=Msa0011740-mRNA-1:exon:6466;Parent=Msa0011740-mRNA-1
chr1_1 exon 17694315 17694476 17694315 ID=Msa0011740-mRNA-1:exon:6467;Parent=Msa0011740-mRNA-1
chr1_1 exon 17695479 17695556 17695479 ID=Msa0011740-mRNA-1:exon:6468;Parent=Msa0011740-mRNA-1
chr1_1 exon 17697053 17697186 17697053 ID=Msa0011740-mRNA-1:exon:6469;Parent=Msa0011740-mRNA-1
chr1_1 exon 17697344 17697416 17697344 ID=Msa0011740-mRNA-1:exon:6470;Parent=Msa0011740-mRNA-1
chr1_1 exon 17697498 17697575 17697498 ID=Msa0011740-mRNA-1:exon:6471;Parent=Msa0011740-mRNA-1
chr1_1 exon 17697699 17697821 17697699 ID=Msa0011740-mRNA-1:exon:6472;Parent=Msa0011740-mRNA-1
chr1_1 exon 17698019 17698071 17698019 ID=Msa0011740-mRNA-1:exon:6473;Parent=Msa0011740-mRNA-1
chr1_1 exon 17698861 17699070 17698861 ID=Msa0011740-mRNA-1:exon:6474;Parent=Msa0011740-mRNA-1
chr1_1 exon 17699342 17699399 17699342 ID=Msa0011740-mRNA-1:exon:6475;Parent=Msa0011740-mRNA-1
chr1_1 exon 17700646 17701116 17700646 ID=Msa0011740-mRNA-1:exon:6476;Parent=Msa0011740-mRNA-1
chr1_1 five_prime_UTR 17675248 17675330 17675248 ID=Msa0011740-mRNA-1:five_prime_utr;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17675331 17675438 17675331 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17675526 17675660 17675526 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17676963 17677079 17676963 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17677215 17677343 17677215 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17677629 17677805 17677629 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17677942 17678011 17677942 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17678680 17678834 17678680 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17679684 17679810 17679684 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17681517 17681684 17681517 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17682492 17682673 17682492 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17683546 17683692 17683546 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17683786 17683947 17683786 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17684950 17685027 17684950 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17686498 17686632 17686498 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17687454 17687570 17687454 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17687712 17687840 17687712 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17688131 17688307 17688131 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17688444 17688584 17688444 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17689185 17689370 17689185 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17690213 17690339 17690213 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17692045 17692212 17692045 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17693020 17693201 17693020 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17694075 17694221 17694075 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17694315 17694476 17694315 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17695479 17695556 17695479 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17697053 17697186 17697053 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17697344 17697416 17697344 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17697498 17697575 17697498 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17697699 17697821 17697699 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17698019 17698071 17698019 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17698861 17699070 17698861 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17699342 17699399 17699342 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 CDS 17700646 17700714 17700646 ID=Msa0011740-mRNA-1:cds;Parent=Msa0011740-mRNA-1
chr1_1 three_prime_UTR 17700715 17701116 17700715 ID=Msa0011740-mRNA-1:three_prime_utr;Parent=Msa0011740-mRNA-1
Gene Sequence

>Msa0011740

ATGGCCTTCACTCTCAATCTTCCGATAACCCCTTCTTTCTCTACCCCATTCTTCAACAACCACAACAAACCAACCGTTTCATGTTCCTTCACTTCACAATCTCTTAAGTGTAAGAGAGAGTACACGAGTGTGATGATAGTGCCGACTGGAACTGGAGCCGCTATTGGTGGGTTTGCTGGTGATGCTTTGCCTGTTGCTCGTGCTCTCTCTTCAGTTGTTGATTGCCTTATCACTCACCCTAATGTGCTTAACGCAGCAATGCTATATTGGCCAATGCCTAATGCATTATATGTTGAAGGTTATGCTCTTGACAGATTTGCAGAAGGGTCATGGGCCTTACAGCCTGTTCACCAAAATAGGGTTGGAATAGTTCTTGATGCTGGTATAGAGGAAGAGCTTCGGATTCGACAGTTACAAGTAGCCGATGCTGCAAGGGCTTCCCTCGGATTGCCTGTTGTAGAATATACTGTCACAGACACTCCACTTGAGGTAGAGAAGTGGGTTGATCCTAAAACTGGCAAATCTACAGGGAGGATCAAGCACCCTGATTCTTTAATTAGAGCTGTGCAGACCTTAGTGAATAGGTCAAAAGTGAATGCCATCGCTGTTGTTGGACGTTTCCCAGATGATGATACTGATGATGTTGATGAATATCGGCAGGGATTGGGAGTAGACCTACTGGCGGGAGTTGAGGCTGTTATAAGCCATCTAGTGGTGAAGGAGTTCCGAATTCCTTCTGGCCTCAGTAAAGCTCCACAATACTTGGTGATGCACTCTGAATCAATGGAAAAGGGTTGCATATTGGCAAGTGATGTGGATTCTGTAGTCCTTCCCAGGGATGCTTGTGGAGGGGACGGGACTCTTGCTTTTGCACGAAATGCAAAAAATAAGCTGCATGTCTCAAATTATTGGGAAGCTATTGGAGTAATAGCTGCTCACAAAGCAGGGATAGATCCATTTTCACTTAGAAGAAATAAAATTCGTAACATTGGGAGCACTTCATTTATGCCTGCCAATGCCACCGTAAAGCTTGAAGCTGCAAAAATGGTGGGTTTACCTTATGGAATCCAATCTATGCTCAAAGAAGGTCACAAACATCTCTCTGGTCTCGACGAAGCCGTTCTCAAAAACATCGATGCTTGTAACCAACTCTCCACTATCACCCGCACTTCCCTCGGTCCCAATGTACAACATCCTGCTGCTAAGATTTTGGTTTTGGCTGGGAAAGCTCAACAAGAGGAAATTGGTGATGGCGCTAATTTAACTATTTCTTTTGCCGGCGAGTTACTTCATGGTGCTGAAGAGCTTATTAGGATGGGTTTGCATCCCAGTGAGATTATCAGTGGATATACCAAAGCCATTGCTAAGACTATGGAAATATTGGACGAACTTGTTGAGGAAGGTTCCGACAATATGGATGTCCGTGACAAGGAGCAAGTTATTTCTCGAATGAAAGCTGCTGTTGCTAGCAAGCAATTCGGTCAAGAAGATACTATATGCTCTCTTGTCGCTGATGCATGCATCCAAGTGTGTCCAAAAAACCCTGTAAACTTTAATGTGGACAATGTTCGTGTCGCAAAGCTCTTAGGAGGAGGCTTGCGTAATAGTACAGTTGTTCGGGGAATGGTTCTGAGAAATGATGCTGTTGGTAGTATAAAGAGAATGGAAAAGGCAAAGGTGGCTGTGTTTGCTGGTGGTGTTGATACATCTGCAACTGAAACTAAAGGAACTGTTCTCATACATTCTGCTGAACAGTGTAAGAGAGAGTATACGAGTGTGATGATAGTGCCGACTGGAACTGGAGCCGCTATTGGTGGGTTTGCTGGTGATGCTTTGCCTGTTGCTCGTGCTCTCTCTTCTGTTGTTGATTGCCTTATCACTCACCCTAATGTGCTTAACGCAGCAATGCTATATTGGCCAATGCCTAACGCATTATATGTTGAAGGTTATGCTCTTGACAGATTCGCAGAAGGGTCATGGGCCTTACAGCCTGTTCACCAAAATAGGGTTGGAATAGTTCTTGATGCTGGTATAGAGGAAGAACTTCGGATTCGACAGTTACAGGTAGCCGATGCTGCAAGGGCTTCCCTCGGATTGCCTGTTGCAGAATATACTGTCACAGACACTCCACTTGAGGTAGAGAAGTGGATTGATCCTAAAACTGGCAAATCTACAGGGAGGATTAAGCACCCTGATTCTTTACTTAGAGCTGTGCAGACCTTAGTGAATAGGTCAAAAGTGAATGCCATCGCTGTTGTTGGACGTTTCCCAGATGATGATACTGATGATGTTGATGAATATCGGCAGGGATTGGGAGTAGACCTACTGGCGGGAGTTGAGGCAGTTATAAGCCATCTAGTGGTGAAGGAGTTCCAAATTCCTTGTGCACATGCTCCTGCAATGACTCCAATTCCCCTGAGCCTATCTCTAAGTCCCAAATCAGCAGCTGAGGAGATTGGGTACACTTTTCTGCCATGTGTGCTAGCTGGCCTCAGTAAAGCTCCACAATACTTGGCGATGCACTCTGAATCAATGGAAAAGGGTTGCATATTGGCAAGTGATGTGGATTCTGTAGTCCTTCCCAGAGATGCTTGTGGAGGGGACGGGACTCTTGCTTTTGCACGAAATGCAAAAAATAAGCTGCATGTCTCAAATTATTGGGAAGCTATTGGAGTAATAGCTGCTCACAAAGCAGGGATAGATCCATTTTCACTTAGAAGAAATAAAATTCGTAACATTGGGAGCACTTCATTTATGCCTGCCAATGCCACCGTAAAGCTTGAAGCTGCAAAAATGGTGGGTTTACCTTATGGAATCCAATCTATGCTCAAAGAAGGTCACAAACATCTCTCTGGTCTCGACGAAGCCGTTCTCAAAAACATCGATGCTTGTAACCAACTCTCCACTATCACCCGCACTTCCCTCGGTCCCAATGTACAACATCCTGCTGCTAAGATTTTGGTTTTGGCTGGGAAAGCTCAACAAGAGGAAATTGGTGATGGCGCTAATTTAACTATTTCTTTTGCCGGCGAGTTACTTCATGGTGCTGAAGAGCTTATTAGGATGGGTTTGCATCCCAGTGAGATTATCAGTGGATATACCAAAGCCATTGCTAAGACTATGGAAATATTGGACGAACTTGTTGAGGAAGGTTCCGACAATATGGATGTCCGTGACAAGGAGCAAGTTATTTCTCGAATGAAAGCTGCTGTTGCTAGCAAGCAATTCGGTCAAGAAGATACTATATGCTCTCTTGTCGCTGATGCATGCATCCAAGTGTGTCCAAAAAACCCTGTAAACTTTAATGTGGACAATGTTCGTGTCGCAAAGCTCTTAGGAGGAGGCTTGCGTAATAGTACAGTTGTTCGGGGAATGGTTCTGAGAAATGATGCTGTTGGTAGTATAAAGAGAATGGAAAAGGCAAAGGTGGCTGTGTTTGCTGGTGGTGTTGATACATCTGCAACTGAAACTAAAGGAACTGTTCTCATACATTCTGCTGAACAGCTAGAAAATTATTCGAAAACTGAAGAGGCTAAAGTAGAAGAGCTCATCAAGGCTGTAGTTGATTCTGGTGCCCAAGTGATTGTAAGCGGAGGAGCAGTAGGAGAGATGGCTTTGCATTTCTGTGAGCGTTATAAGCTTATGGTTCTGAAAATCAGCTCTAAGTTTGAACTGCGTCGATTTTGCCGTACGACTGGTTCTGTAGCTATGTTGAAGCTTAGTCGACCAAACCCAGATGATCTTGGATATGTTGATTCTGTTTCAGTTGAGGAAATTGGTGGTGCAAGGGTGACCATTGTTAAAAATGAAGAAGGTGGCAATTCTGTAGCAACTGTTGTCTTAAGAGGAAGTACTGATAGTATACTTGATGATATTGAAAGAGCAGTTGATGATGGAGTGAACACTTACAAGACTATGTGCAGGGATAGCCGTATTGTGCCTGGAGCTGCAGCAACTGAAATTGAATTGGATCAGTATGCTATAGCAAAATTTGCTGAAAGCTTTGAGATGATTCCTAGAACATTGGCGGAGAATGCTGGGCTAAATGCAATGGAGATTATATCTTCTCTCTACGCAGAACATGCATCAGGAAACACTAAAGTTGGCATTGATTTGGACGAGGGTGTTTGTAAGGATGTCACAACCACACATGTTTGGGATCTCCACATGGCTAAGCTTTTTGCTCTTAAATACGCTGCTGATGCTGCATGCACTGTACTACGGGTGGACCAGATTATTATGGCGAAACCGGCTGGAGGACCTGGCAAGAGAGAGCAACCTGCTGGCATGGACGAAGACTAA

Protein sequence

>Msa0011740

MAFTLNLPITPSFSTPFFNNHNKPTVSCSFTSQSLKCKREYTSVMIVPTGTGAAIGGFAGDALPVARALSSVVDCLITHPNVLNAAMLYWPMPNALYVEGYALDRFAEGSWALQPVHQNRVGIVLDAGIEEELRIRQLQVADAARASLGLPVVEYTVTDTPLEVEKWVDPKTGKSTGRIKHPDSLIRAVQTLVNRSKVNAIAVVGRFPDDDTDDVDEYRQGLGVDLLAGVEAVISHLVVKEFRIPSGLSKAPQYLVMHSESMEKGCILASDVDSVVLPRDACGGDGTLAFARNAKNKLHVSNYWEAIGVIAAHKAGIDPFSLRRNKIRNIGSTSFMPANATVKLEAAKMVGLPYGIQSMLKEGHKHLSGLDEAVLKNIDACNQLSTITRTSLGPNVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLHGAEELIRMGLHPSEIISGYTKAIAKTMEILDELVEEGSDNMDVRDKEQVISRMKAAVASKQFGQEDTICSLVADACIQVCPKNPVNFNVDNVRVAKLLGGGLRNSTVVRGMVLRNDAVGSIKRMEKAKVAVFAGGVDTSATETKGTVLIHSAEQCKREYTSVMIVPTGTGAAIGGFAGDALPVARALSSVVDCLITHPNVLNAAMLYWPMPNALYVEGYALDRFAEGSWALQPVHQNRVGIVLDAGIEEELRIRQLQVADAARASLGLPVAEYTVTDTPLEVEKWIDPKTGKSTGRIKHPDSLLRAVQTLVNRSKVNAIAVVGRFPDDDTDDVDEYRQGLGVDLLAGVEAVISHLVVKEFQIPCAHAPAMTPIPLSLSLSPKSAAEEIGYTFLPCVLAGLSKAPQYLAMHSESMEKGCILASDVDSVVLPRDACGGDGTLAFARNAKNKLHVSNYWEAIGVIAAHKAGIDPFSLRRNKIRNIGSTSFMPANATVKLEAAKMVGLPYGIQSMLKEGHKHLSGLDEAVLKNIDACNQLSTITRTSLGPNVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLHGAEELIRMGLHPSEIISGYTKAIAKTMEILDELVEEGSDNMDVRDKEQVISRMKAAVASKQFGQEDTICSLVADACIQVCPKNPVNFNVDNVRVAKLLGGGLRNSTVVRGMVLRNDAVGSIKRMEKAKVAVFAGGVDTSATETKGTVLIHSAEQLENYSKTEEAKVEELIKAVVDSGAQVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGSVAMLKLSRPNPDDLGYVDSVSVEEIGGARVTIVKNEEGGNSVATVVLRGSTDSILDDIERAVDDGVNTYKTMCRDSRIVPGAAATEIELDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLDEGVCKDVTTTHVWDLHMAKLFALKYAADAACTVLRVDQIIMAKPAGGPGKREQPAGMDED*