Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426120 | XP_003625582.1 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 5.13e-97 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426120 | sp|P49201|RS232_ARATH | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.03e-97 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426120 | B7FHD2 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 2.45e-97 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1426120 | 0.864805 | 9.335316e-65 | -8.615850e-47 |
| Msa0002790 | Msa1426120 | 0.864890 | 8.775755e-65 | -8.615850e-47 |
| Msa0011740 | Msa1426120 | 0.805408 | 1.354609e-49 | -8.615850e-47 |
| Msa0032780 | Msa1426120 | 0.851186 | 1.045370e-60 | -8.615850e-47 |
| Msa0036330 | Msa1426120 | 0.809556 | 1.784719e-50 | -8.615850e-47 |
| Msa0040220 | Msa1426120 | 0.816076 | 6.661346e-52 | -8.615850e-47 |
| Msa0042480 | Msa1426120 | 0.823335 | 1.464263e-53 | -8.615850e-47 |
| Msa0044890 | Msa1426120 | 0.843909 | 1.048367e-58 | -8.615850e-47 |
| Msa0049690 | Msa1426120 | 0.815114 | 1.091054e-51 | -8.615850e-47 |
| Msa0068970 | Msa1426120 | 0.841983 | 3.411814e-58 | -8.615850e-47 |
| Msa0074030 | Msa1426120 | 0.849752 | 2.643120e-60 | -8.615850e-47 |
| Msa0079590 | Msa1426120 | 0.819976 | 8.753175e-53 | -8.615850e-47 |
| Msa0084250 | Msa1426120 | 0.810236 | 1.274107e-50 | -8.615850e-47 |
| Msa0086750 | Msa1426120 | 0.801068 | 1.072152e-48 | -8.615850e-47 |
| Msa0087910 | Msa1426120 | 0.844244 | 8.523092e-59 | -8.615850e-47 |
| Msa0114570 | Msa1426120 | 0.814827 | 1.263434e-51 | -8.615850e-47 |
| Msa0116130 | Msa1426120 | 0.809561 | 1.780278e-50 | -8.615850e-47 |
| Msa0116670 | Msa1426120 | 0.880558 | 4.971786e-70 | -8.615850e-47 |
| Msa1356790 | Msa1426120 | 0.840657 | 7.618836e-58 | -8.615850e-47 |
| Msa1362210 | Msa1426120 | 0.808471 | 3.047853e-50 | -8.615850e-47 |
| Msa1362790 | Msa1426120 | 0.861586 | 9.247659e-64 | -8.615850e-47 |
| Msa1366180 | Msa1426120 | 0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa1368920 | Msa1426120 | 0.893628 | 5.267962e-75 | -8.615850e-47 |
| Msa1374240 | Msa1426120 | 0.819775 | 9.726337e-53 | -8.615850e-47 |
| Msa1387410 | Msa1426120 | 0.801389 | 9.215878e-49 | -8.615850e-47 |
| Msa1392590 | Msa1426120 | 0.823181 | 1.590376e-53 | -8.615850e-47 |
| Msa1397100 | Msa1426120 | 0.860884 | 1.512609e-63 | -8.615850e-47 |
| Msa1403910 | Msa1426120 | 0.837238 | 5.848798e-57 | -8.615850e-47 |
| Msa1406080 | Msa1426120 | 0.812981 | 3.225100e-51 | -8.615850e-47 |
| Msa1413500 | Msa1426120 | 0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa1418770 | Msa1426120 | 0.869448 | 3.072091e-66 | -8.615850e-47 |
| Msa1426120 | Msa1426370 | 0.828225 | 1.011802e-54 | -8.615850e-47 |
| Msa1426120 | Msa1426490 | 0.864132 | 1.514608e-64 | -8.615850e-47 |
| Msa1426120 | Msa1427560 | 0.808355 | 3.226358e-50 | -8.615850e-47 |
| Msa1426120 | Msa1437280 | 0.819182 | 1.328128e-52 | -8.615850e-47 |
| Msa0606580 | Msa1426120 | 0.810318 | 1.223342e-50 | -8.615850e-47 |
| Msa0625570 | Msa1426120 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0647280 | Msa1426120 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
| Msa0653060 | Msa1426120 | 0.827024 | 1.966052e-54 | -8.615850e-47 |
| Msa0686800 | Msa1426120 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0705800 | Msa1426120 | 0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0712610 | Msa1426120 | 0.837574 | 4.796550e-57 | -8.615850e-47 |
| Msa0717380 | Msa1426120 | 0.855807 | 4.922551e-62 | -8.615850e-47 |
| Msa0729200 | Msa1426120 | 0.836308 | 1.009572e-56 | -8.615850e-47 |
| Msa0752910 | Msa1426120 | 0.842475 | 2.528551e-58 | -8.615850e-47 |
| Msa0769590 | Msa1426120 | 0.828544 | 8.476360e-55 | -8.615850e-47 |
| Msa0781080 | Msa1426120 | 0.844300 | 8.235919e-59 | -8.615850e-47 |
| Msa0783630 | Msa1426120 | 0.849194 | 3.781508e-60 | -8.615850e-47 |
| Msa0785130 | Msa1426120 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0788380 | Msa1426120 | 0.817225 | 3.682272e-52 | -8.615850e-47 |
| Msa0792420 | Msa1426120 | 0.829936 | 3.895234e-55 | -8.615850e-47 |
| Msa0799830 | Msa1426120 | 0.841380 | 4.921159e-58 | -8.615850e-47 |
| Msa0806880 | Msa1426120 | 0.813286 | 2.764846e-51 | -8.615850e-47 |
| Msa0817540 | Msa1426120 | 0.818972 | 1.482825e-52 | -8.615850e-47 |
| Msa0827380 | Msa1426120 | 0.802367 | 5.801495e-49 | -8.615850e-47 |
| Msa0128750 | Msa1426120 | 0.827064 | 1.922888e-54 | -8.615850e-47 |
| Msa0129660 | Msa1426120 | 0.845240 | 4.594214e-59 | -8.615850e-47 |
| Msa0130420 | Msa1426120 | 0.826947 | 2.051002e-54 | -8.615850e-47 |
| Msa0133540 | Msa1426120 | 0.840311 | 9.386320e-58 | -8.615850e-47 |
| Msa0134580 | Msa1426120 | 0.804385 | 2.215887e-49 | -8.615850e-47 |
| Msa0172900 | Msa1426120 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0172930 | Msa1426120 | 0.837400 | 5.314643e-57 | -8.615850e-47 |
| Msa0173530 | Msa1426120 | 0.881775 | 1.813590e-70 | -8.615850e-47 |
| Msa0181490 | Msa1426120 | 0.838271 | 3.176119e-57 | -8.615850e-47 |
| Msa0183090 | Msa1426120 | 0.849504 | 3.098947e-60 | -8.615850e-47 |
| Msa0186740 | Msa1426120 | 0.819427 | 1.168356e-52 | -8.615850e-47 |
| Msa0189700 | Msa1426120 | 0.848150 | 7.363142e-60 | -8.615850e-47 |
| Msa0191450 | Msa1426120 | 0.813555 | 2.412314e-51 | -8.615850e-47 |
| Msa0191550 | Msa1426120 | 0.820405 | 6.978838e-53 | -8.615850e-47 |
| Msa0194940 | Msa1426120 | 0.880054 | 7.524398e-70 | -8.615850e-47 |
| Msa0210330 | Msa1426120 | 0.849768 | 2.616038e-60 | -8.615850e-47 |
| Msa0210360 | Msa1426120 | 0.896056 | 5.319717e-76 | -8.615850e-47 |
| Msa0218830 | Msa1426120 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
| Msa0219120 | Msa1426120 | 0.839039 | 2.011048e-57 | -8.615850e-47 |
| Msa0221030 | Msa1426120 | 0.813541 | 2.429299e-51 | -8.615850e-47 |
| Msa0222730 | Msa1426120 | 0.858209 | 9.638425e-63 | -8.615850e-47 |
| Msa0230490 | Msa1426120 | 0.836035 | 1.184575e-56 | -8.615850e-47 |
| Msa0232010 | Msa1426120 | 0.837308 | 5.610694e-57 | -8.615850e-47 |
| Msa0232080 | Msa1426120 | 0.836554 | 8.742616e-57 | -8.615850e-47 |
| Msa1256840 | Msa1426120 | 0.858120 | 1.024721e-62 | -8.615850e-47 |
| Msa1258540 | Msa1426120 | 0.804278 | 2.332642e-49 | -8.615850e-47 |
| Msa1266060 | Msa1426120 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa1273340 | Msa1426120 | 0.831365 | 1.739738e-55 | -8.615850e-47 |
| Msa1295150 | Msa1426120 | 0.827826 | 1.262431e-54 | -8.615850e-47 |
| Msa1295170 | Msa1426120 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa1299590 | Msa1426120 | 0.850685 | 1.447161e-60 | -8.615850e-47 |
| Msa1311400 | Msa1426120 | 0.923302 | 3.178041e-89 | -8.615850e-47 |
| Msa1321790 | Msa1426120 | 0.832976 | 6.951223e-56 | -8.615850e-47 |
| Msa1332250 | Msa1426120 | 0.932954 | 3.913042e-95 | -8.615850e-47 |
| Msa1338190 | Msa1426120 | 0.868146 | 8.108202e-66 | -8.615850e-47 |
| Msa1343260 | Msa1426120 | 0.870877 | 1.046973e-66 | -8.615850e-47 |
| Msa0369410 | Msa1426120 | 0.818079 | 2.363457e-52 | -8.615850e-47 |
| Msa0426090 | Msa1426120 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0426250 | Msa1426120 | 0.838958 | 2.110060e-57 | -8.615850e-47 |
| Msa0463520 | Msa1426120 | 0.833646 | 4.732417e-56 | -8.615850e-47 |
| Msa0471880 | Msa1426120 | 0.862621 | 4.451582e-64 | -8.615850e-47 |
| Msa0475810 | Msa1426120 | 0.822672 | 2.089637e-53 | -8.615850e-47 |
| Msa0481520 | Msa1426120 | 0.816307 | 5.916272e-52 | -8.615850e-47 |
| Msa0481850 | Msa1426120 | 0.870699 | 1.197750e-66 | -8.615850e-47 |
| Msa1010310 | Msa1426120 | 0.826090 | 3.282073e-54 | -8.615850e-47 |
| Msa1024180 | Msa1426120 | 0.805394 | 1.363697e-49 | -8.615850e-47 |
| Msa1037290 | Msa1426120 | 0.895898 | 6.182890e-76 | -8.615850e-47 |
| Msa1039520 | Msa1426120 | 0.816786 | 4.622189e-52 | -8.615850e-47 |
| Msa1040160 | Msa1426120 | 0.878995 | 1.787353e-69 | -8.615850e-47 |
| Msa1041680 | Msa1426120 | 0.824233 | 9.020354e-54 | -8.615850e-47 |
| Msa1078870 | Msa1426120 | 0.995467 | 1.463166e-216 | -8.615850e-47 |
| Msa1078980 | Msa1426120 | 0.979509 | 4.005788e-148 | -8.615850e-47 |
| Msa1080350 | Msa1426120 | 0.884763 | 1.451638e-71 | -8.615850e-47 |
| Msa1083370 | Msa1426120 | 0.840365 | 9.085358e-58 | -8.615850e-47 |
| Msa1088490 | Msa1426120 | 0.829545 | 4.848135e-55 | -8.615850e-47 |
| Msa1089220 | Msa1426120 | 0.803196 | 3.912393e-49 | -8.615850e-47 |
| Msa1091290 | Msa1426120 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa1094380 | Msa1426120 | 0.844063 | 9.533919e-59 | -8.615850e-47 |
| Msa1096900 | Msa1426120 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0250820 | Msa1426120 | 0.832281 | 1.033880e-55 | -8.615850e-47 |
| Msa0250870 | Msa1426120 | 0.832395 | 9.686265e-56 | -8.615850e-47 |
| Msa0257450 | Msa1426120 | 0.856509 | 3.066741e-62 | -8.615850e-47 |
| Msa0258850 | Msa1426120 | 0.844996 | 5.347321e-59 | -8.615850e-47 |
| Msa0264010 | Msa1426120 | 0.830375 | 3.042605e-55 | -8.615850e-47 |
| Msa0269180 | Msa1426120 | 0.811775 | 5.912859e-51 | -8.615850e-47 |
| Msa0289580 | Msa1426120 | 0.839846 | 1.240892e-57 | -8.615850e-47 |
| Msa0289610 | Msa1426120 | 0.839505 | 1.522394e-57 | -8.615850e-47 |
| Msa0296720 | Msa1426120 | 0.832694 | 8.168574e-56 | -8.615850e-47 |
| Msa0297830 | Msa1426120 | 0.869664 | 2.613920e-66 | -8.615850e-47 |
| Msa0298200 | Msa1426120 | 0.837395 | 5.330457e-57 | -8.615850e-47 |
| Msa0301220 | Msa1426120 | 0.840045 | 1.101207e-57 | -8.615850e-47 |
| Msa0306690 | Msa1426120 | 0.827370 | 1.624281e-54 | -8.615850e-47 |
| Msa0312210 | Msa1426120 | 0.803727 | 3.035857e-49 | -8.615850e-47 |
| Msa0327300 | Msa1426120 | 0.819770 | 9.752150e-53 | -8.615850e-47 |
| Msa0335840 | Msa1426120 | 0.885537 | 7.467040e-72 | -8.615850e-47 |
| Msa0341880 | Msa1426120 | 0.848526 | 5.793434e-60 | -8.615850e-47 |
| Msa0342850 | Msa1426120 | 0.848543 | 5.733270e-60 | -8.615850e-47 |
| Msa0348830 | Msa1426120 | 0.811404 | 7.121392e-51 | -8.615850e-47 |
| Msa1124850 | Msa1426120 | 0.823894 | 1.083283e-53 | -8.615850e-47 |
| Msa1125860 | Msa1426120 | 0.878775 | 2.137731e-69 | -8.615850e-47 |
| Msa1126060 | Msa1426120 | 0.879917 | 8.421130e-70 | -8.615850e-47 |
| Msa1126520 | Msa1426120 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
| Msa1128120 | Msa1426120 | 0.840524 | 8.257319e-58 | -8.615850e-47 |
| Msa1164150 | Msa1426120 | 0.869382 | 3.229599e-66 | -8.615850e-47 |
| Msa1166570 | Msa1426120 | 0.822404 | 2.412304e-53 | -8.615850e-47 |
| Msa1167540 | Msa1426120 | 0.869535 | 2.878367e-66 | -8.615850e-47 |
| Msa1169180 | Msa1426120 | 0.975931 | 7.258136e-141 | -8.615850e-47 |
| Msa1203560 | Msa1426120 | 0.844118 | 9.212909e-59 | -8.615850e-47 |
| Msa1208330 | Msa1426120 | 0.844108 | 9.270618e-59 | -8.615850e-47 |
| Msa1215820 | Msa1426120 | 0.871112 | 8.754229e-67 | -8.615850e-47 |
| Msa0483110 | Msa1426120 | 0.802381 | 5.763500e-49 | -8.615850e-47 |
| Msa0486070 | Msa1426120 | 0.844929 | 5.574506e-59 | -8.615850e-47 |
| Msa0529900 | Msa1426120 | 0.847366 | 1.209965e-59 | -8.615850e-47 |
| Msa0550420 | Msa1426120 | 0.832866 | 7.401117e-56 | -8.615850e-47 |
| Msa0557720 | Msa1426120 | 0.800994 | 1.109654e-48 | -8.615850e-47 |
| Msa0584030 | Msa1426120 | 0.866406 | 2.919487e-65 | -8.615850e-47 |
| Msa0584260 | Msa1426120 | 0.800656 | 1.300789e-48 | -8.615850e-47 |
| Msa0590940 | Msa1426120 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0861320 | Msa1426120 | 0.851380 | 9.214611e-61 | -8.615850e-47 |
| Msa0881290 | Msa1426120 | 0.847521 | 1.097015e-59 | -8.615850e-47 |
| Msa0888810 | Msa1426120 | 0.829930 | 3.906262e-55 | -8.615850e-47 |
| Msa0915540 | Msa1426120 | 0.820991 | 5.119184e-53 | -8.615850e-47 |
| Msa0945480 | Msa1426120 | 0.810191 | 1.303112e-50 | -8.615850e-47 |
| Msa0953310 | Msa1426120 | 0.813555 | 2.412314e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426120 | MtrunA17_Chr7g0263691 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 4.72e-101 | 285 |
| Msa1426120 | MtrunA17_Chr1g0181621 | 93.662 | 142 | 9 | 0 | 1 | 142 | 1 | 142 | 1.56e-94 | 269 |
| Msa1426120 | MtrunA17_Chr7g0239631 | 52.113 | 71 | 31 | 2 | 40 | 109 | 13 | 81 | 4.35e-16 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1426120 | AT5G02960.1 | 96.479 | 142 | 5 | 0 | 1 | 142 | 1 | 142 | 4.09e-98 | 278 |
| Msa1426120 | AT3G09680.1 | 92.958 | 142 | 10 | 0 | 1 | 142 | 1 | 142 | 2.12e-93 | 266 |
Find 61 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGGTCGTGAAGGTTTC+TGG | 0.178129 | tig0025942:+66636 | Msa1426120:CDS |
| GAAGTCTTGATCGCTGGATT+TGG | 0.312989 | tig0025942:+66573 | Msa1426120:CDS |
| TAATTCAAGCAACCATCATT+TGG | 0.323107 | tig0025942:-66400 | None:intergenic |
| CATAAAACTCATTTAGTTTG+AGG | 0.380711 | tig0025942:-66775 | None:intergenic |
| CATGCTGTTGGTGATATTCC+TGG | 0.406074 | tig0025942:+66606 | Msa1426120:CDS |
| TAGTTCTGCTTGGAGGAAAT+CGG | 0.419730 | tig0025942:-65478 | None:intergenic |
| AATTCAAGCAACCATCATTT+GGG | 0.428558 | tig0025942:-66399 | None:intergenic |
| CACTTACGAATGGCAGAGTT+GGG | 0.434931 | tig0025942:-66328 | None:intergenic |
| CTGCCATTCGTAAGTGTGCT+AGG | 0.435504 | tig0025942:+66335 | Msa1426120:CDS |
| TTGGTGATATTCCTGGAGTC+AGG | 0.441270 | tig0025942:+66613 | Msa1426120:CDS |
| AGCATGGGATGAACCAGAAA+AGG | 0.446685 | tig0025942:-66157 | None:intergenic |
| TTCTGGTTCATCCCATGCTA+AGG | 0.454550 | tig0025942:+66161 | Msa1426120:CDS |
| AATTTAAGAAATCTCATCTT+GGG | 0.454713 | tig0025942:+66118 | Msa1426120:CDS |
| AATCTCATCTTGGGAATGAA+TGG | 0.457554 | tig0025942:+66127 | Msa1426120:CDS |
| AAAAGAGAAGAAGAGAAGAT+AGG | 0.458478 | tig0025942:-66879 | None:intergenic |
| CAATTTAAGAAATCTCATCT+TGG | 0.461581 | tig0025942:+66117 | Msa1426120:CDS |
| CAGCCCACCTTTGCTTGATA+CGG | 0.462913 | tig0025942:-66089 | None:intergenic |
| TTTATTCACCGGAAAGATTG+AGG | 0.463634 | tig0025942:-66918 | None:intergenic |
| TAGGATGAAGTCTTGATCGC+TGG | 0.469665 | tig0025942:+66567 | Msa1426120:intron |
| GCTGCCTTTGTCCCAAATGA+TGG | 0.476668 | tig0025942:+66388 | Msa1426120:CDS |
| AAAGATTACTAGTACTAAAA+CGG | 0.482451 | tig0025942:-66811 | None:intergenic |
| AACTAATTCTCGATCACCAT+GGG | 0.484292 | tig0025942:+65496 | Msa1426120:exon |
| TGCAGGAAGACAAGAGGAAT+GGG | 0.492442 | tig0025942:+66042 | Msa1426120:intron |
| CAAGAACAATTCCCTTAGCA+TGG | 0.494037 | tig0025942:-66173 | None:intergenic |
| CGAGAATTAGTTCTGCTTGG+AGG | 0.500410 | tig0025942:-65485 | None:intergenic |
| AGCCTAGGTCTTGAAGTTGT+GGG | 0.508957 | tig0025942:+66697 | Msa1426120:exon |
| TTCACCGGAAAGATTGAGGG+GGG | 0.513867 | tig0025942:-66914 | None:intergenic |
| ACACTTACGAATGGCAGAGT+TGG | 0.515105 | tig0025942:-66329 | None:intergenic |
| AAGCCTAGGTCTTGAAGTTG+TGG | 0.517866 | tig0025942:+66696 | Msa1426120:exon |
| ATCGCTGGATTTGGACGTAA+AGG | 0.518707 | tig0025942:+66582 | Msa1426120:CDS |
| GCATGGGATGAACCAGAAAA+GGG | 0.518943 | tig0025942:-66156 | None:intergenic |
| AGGAGAAGAAGGAGAAGCCT+AGG | 0.519158 | tig0025942:+66682 | Msa1426120:CDS |
| GATCGAGAATTAGTTCTGCT+TGG | 0.520258 | tig0025942:-65488 | None:intergenic |
| TTATTCACCGGAAAGATTGA+GGG | 0.524238 | tig0025942:-66917 | None:intergenic |
| TATTCCTGGAGTCAGGTTCA+AGG | 0.524415 | tig0025942:+66620 | Msa1426120:CDS |
| TCACCGGAAAGATTGAGGGG+GGG | 0.527597 | tig0025942:-66913 | None:intergenic |
| CTGCAGGAAGACAAGAGGAA+TGG | 0.532735 | tig0025942:+66041 | Msa1426120:intron |
| AAGAACAATTCCCTTAGCAT+GGG | 0.533822 | tig0025942:-66172 | None:intergenic |
| TCTGGTTCATCCCATGCTAA+GGG | 0.536691 | tig0025942:+66162 | Msa1426120:CDS |
| TGCCATTCGTAAGTGTGCTA+GGG | 0.546102 | tig0025942:+66336 | Msa1426120:CDS |
| AAGTGGTACAGTTTATTCAC+CGG | 0.560618 | tig0025942:-66929 | None:intergenic |
| GCAACCATCATTTGGGACAA+AGG | 0.566362 | tig0025942:-66392 | None:intergenic |
| TGGGAGCTGCTCGCAAGCTG+AGG | 0.577320 | tig0025942:+66061 | Msa1426120:CDS |
| ACGACCTTGAACCTGACTCC+AGG | 0.578153 | tig0025942:-66624 | None:intergenic |
| AGAAGAAGAGTATGCTAAAG+CGG | 0.586253 | tig0025942:-65455 | None:intergenic |
| GACTCCGTATCAAGCAAAGG+TGG | 0.586634 | tig0025942:+66085 | Msa1426120:CDS |
| TCTTCTCCTTGAAAAGAGCA+AGG | 0.589001 | tig0025942:-66668 | None:intergenic |
| TTTGTCTGCAGGAAGACAAG+AGG | 0.606196 | tig0025942:+66036 | Msa1426120:intron |
| AAGATAATTGAATAATCAAG+TGG | 0.606771 | tig0025942:-66946 | None:intergenic |
| GGACGTAAAGGTCATGCTGT+TGG | 0.616141 | tig0025942:+66594 | Msa1426120:CDS |
| GAACTAATTCTCGATCACCA+TGG | 0.625355 | tig0025942:+65495 | Msa1426120:exon |
| AACCCTAGCACACTTACGAA+TGG | 0.626506 | tig0025942:-66338 | None:intergenic |
| TAGGTCTTGAAGTTGTGGGA+TGG | 0.637581 | tig0025942:+66701 | Msa1426120:exon |
| TGGTTGCTTGAATTACATTG+AGG | 0.642212 | tig0025942:+66408 | Msa1426120:CDS |
| TATTCACCGGAAAGATTGAG+GGG | 0.643789 | tig0025942:-66916 | None:intergenic |
| AGTCAGGTTCAAGGTCGTGA+AGG | 0.647492 | tig0025942:+66629 | Msa1426120:CDS |
| ACTCCGTATCAAGCAAAGGT+GGG | 0.652737 | tig0025942:+66086 | Msa1426120:CDS |
| GGAGACTCCGTATCAAGCAA+AGG | 0.654928 | tig0025942:+66082 | Msa1426120:CDS |
| ATCCCACAACTTCAAGACCT+AGG | 0.665200 | tig0025942:-66699 | None:intergenic |
| ATTCACCGGAAAGATTGAGG+GGG | 0.689564 | tig0025942:-66915 | None:intergenic |
| ACTAATTCTCGATCACCATG+GGG | 0.745036 | tig0025942:+65497 | Msa1426120:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATTTAGTTAATTTT+AGG | + | tig0025942:65946-65965 | Msa1426120:intron | 10.0% |
| !!! | GAAAAAATTTAGTTAATTTT+AGG | + | tig0025942:65946-65965 | Msa1426120:intron | 10.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | + | tig0025942:65790-65809 | Msa1426120:intron | 15.0% |
| !!! | ATTTGTATATTTCTAGTATT+AGG | + | tig0025942:65790-65809 | Msa1426120:intron | 15.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | + | tig0025942:65951-65970 | Msa1426120:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | + | tig0025942:66118-66137 | Msa1426120:CDS | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | - | tig0025942:66221-66240 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | - | tig0025942:66507-66526 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | - | tig0025942:66731-66750 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | - | tig0025942:66814-66833 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | - | tig0025942:66949-66968 | None:intergenic | 20.0% |
| !!! | AATTTAGTTAATTTTAGGCA+TGG | + | tig0025942:65951-65970 | Msa1426120:intron | 20.0% |
| !! | AATTTAAGAAATCTCATCTT+GGG | + | tig0025942:66118-66137 | Msa1426120:CDS | 20.0% |
| !! | AAGATATATTTAGTAGTAAG+AGG | - | tig0025942:66221-66240 | None:intergenic | 20.0% |
| !! | TGTAGTTTACATAGTATTAA+AGG | - | tig0025942:66507-66526 | None:intergenic | 20.0% |
| !! | AATGAAACTAAAGAAAAAAG+AGG | - | tig0025942:66731-66750 | None:intergenic | 20.0% |
| !! | AAAGATTACTAGTACTAAAA+CGG | - | tig0025942:66814-66833 | None:intergenic | 20.0% |
| !! | AAGATAATTGAATAATCAAG+TGG | - | tig0025942:66949-66968 | None:intergenic | 20.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | - | tig0025942:65590-65609 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | + | tig0025942:65604-65623 | Msa1426120:intron | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | + | tig0025942:65726-65745 | Msa1426120:intron | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | + | tig0025942:66117-66136 | Msa1426120:CDS | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | + | tig0025942:66262-66281 | Msa1426120:intron | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | + | tig0025942:66272-66291 | Msa1426120:intron | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | + | tig0025942:66355-66374 | Msa1426120:CDS | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | + | tig0025942:66356-66375 | Msa1426120:CDS | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | - | tig0025942:66481-66500 | None:intergenic | 25.0% |
| !!! | CATAAAACTCATTTAGTTTG+AGG | - | tig0025942:66778-66797 | None:intergenic | 25.0% |
| !! | CTCAAACTAAATGAGTTTTA+TGG | + | tig0025942:66776-66795 | Msa1426120:three_prime_UTR | 25.0% |
| ! | TTCAAATACGACAATTAGAA+TGG | - | tig0025942:65590-65609 | None:intergenic | 25.0% |
| ! | TTTGAATTTGACTCTGAATT+TGG | + | tig0025942:65604-65623 | Msa1426120:intron | 25.0% |
| !!! | GAATTTTTTGCTACTTAGTA+TGG | + | tig0025942:65726-65745 | Msa1426120:intron | 25.0% |
| ! | CAATTTAAGAAATCTCATCT+TGG | + | tig0025942:66117-66136 | Msa1426120:CDS | 25.0% |
| ! | TTATTACGCATATGATGTTA+AGG | + | tig0025942:66262-66281 | Msa1426120:intron | 25.0% |
| ! | TATGATGTTAAGGATTTGTA+TGG | + | tig0025942:66272-66291 | Msa1426120:intron | 25.0% |
| ! | AGGGTTCAATTAATCAAAAA+TGG | + | tig0025942:66355-66374 | Msa1426120:CDS | 25.0% |
| ! | GGGTTCAATTAATCAAAAAT+GGG | + | tig0025942:66356-66375 | Msa1426120:CDS | 25.0% |
| ! | AATTAACATAACAGACTCAA+AGG | - | tig0025942:66481-66500 | None:intergenic | 25.0% |
| !!! | CATAAAACTCATTTAGTTTG+AGG | - | tig0025942:66778-66797 | None:intergenic | 25.0% |
| !! | CTCAAACTAAATGAGTTTTA+TGG | + | tig0025942:66776-66795 | Msa1426120:three_prime_UTR | 25.0% |
| GGAACACAAAAACATGAAAT+AGG | + | tig0025942:65670-65689 | Msa1426120:intron | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | + | tig0025942:65826-65845 | Msa1426120:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | + | tig0025942:66025-66044 | Msa1426120:intron | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | + | tig0025942:66297-66316 | Msa1426120:intron | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | - | tig0025942:66402-66421 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | - | tig0025942:66403-66422 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | + | tig0025942:66527-66546 | Msa1426120:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | - | tig0025942:66541-66560 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | + | tig0025942:66540-66559 | Msa1426120:intron | 30.0% |
| AAAAGAGAAGAAGAGAAGAT+AGG | - | tig0025942:66882-66901 | None:intergenic | 30.0% | |
| GGAACACAAAAACATGAAAT+AGG | + | tig0025942:65670-65689 | Msa1426120:intron | 30.0% | |
| ! | ATTCGCTTCATTTGAAATCA+TGG | + | tig0025942:65826-65845 | Msa1426120:intron | 30.0% |
| ! | TTTGTTTATCTTTTGTCTGC+AGG | + | tig0025942:66025-66044 | Msa1426120:intron | 30.0% |
| ! | TTTTATGTGTAGTGGTATTG+AGG | + | tig0025942:66297-66316 | Msa1426120:intron | 30.0% |
| AATTCAAGCAACCATCATTT+GGG | - | tig0025942:66402-66421 | None:intergenic | 30.0% | |
| TAATTCAAGCAACCATCATT+TGG | - | tig0025942:66403-66422 | None:intergenic | 30.0% | |
| ATGTATATCCTCCAGTAATA+TGG | + | tig0025942:66527-66546 | Msa1426120:intron | 30.0% | |
| ATCATCAACAACCATATTAC+TGG | - | tig0025942:66541-66560 | None:intergenic | 30.0% | |
| ! | AGTAATATGGTTGTTGATGA+TGG | + | tig0025942:66540-66559 | Msa1426120:intron | 30.0% |
| AAAAGAGAAGAAGAGAAGAT+AGG | - | tig0025942:66882-66901 | None:intergenic | 30.0% | |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | - | tig0025942:65458-65477 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | + | tig0025942:65496-65515 | Msa1426120:exon | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | + | tig0025942:65648-65667 | Msa1426120:intron | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | + | tig0025942:65649-65668 | Msa1426120:intron | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | + | tig0025942:66127-66146 | Msa1426120:CDS | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | - | tig0025942:66175-66194 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | + | tig0025942:66289-66308 | Msa1426120:intron | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | + | tig0025942:66408-66427 | Msa1426120:CDS | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | - | tig0025942:66538-66557 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | - | tig0025942:66920-66939 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | - | tig0025942:66921-66940 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | - | tig0025942:66932-66951 | None:intergenic | 35.0% | |
| ! | AGAAGAAGAGTATGCTAAAG+CGG | - | tig0025942:65458-65477 | None:intergenic | 35.0% |
| AACTAATTCTCGATCACCAT+GGG | + | tig0025942:65496-65515 | Msa1426120:exon | 35.0% | |
| ! | TCTGTTTGCTTTCTGAGAAT+TGG | + | tig0025942:65648-65667 | Msa1426120:intron | 35.0% |
| ! | CTGTTTGCTTTCTGAGAATT+GGG | + | tig0025942:65649-65668 | Msa1426120:intron | 35.0% |
| AATCTCATCTTGGGAATGAA+TGG | + | tig0025942:66127-66146 | Msa1426120:CDS | 35.0% | |
| AAGAACAATTCCCTTAGCAT+GGG | - | tig0025942:66175-66194 | None:intergenic | 35.0% | |
| ! | GTATGGTCTTTTATGTGTAG+TGG | + | tig0025942:66289-66308 | Msa1426120:intron | 35.0% |
| TGGTTGCTTGAATTACATTG+AGG | + | tig0025942:66408-66427 | Msa1426120:CDS | 35.0% | |
| ATCAACAACCATATTACTGG+AGG | - | tig0025942:66538-66557 | None:intergenic | 35.0% | |
| TTATTCACCGGAAAGATTGA+GGG | - | tig0025942:66920-66939 | None:intergenic | 35.0% | |
| TTTATTCACCGGAAAGATTG+AGG | - | tig0025942:66921-66940 | None:intergenic | 35.0% | |
| AAGTGGTACAGTTTATTCAC+CGG | - | tig0025942:66932-66951 | None:intergenic | 35.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | - | tig0025942:65481-65500 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | - | tig0025942:65491-65510 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | + | tig0025942:65495-65514 | Msa1426120:exon | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | + | tig0025942:65497-65516 | Msa1426120:exon | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | - | tig0025942:65515-65534 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | + | tig0025942:66144-66163 | Msa1426120:CDS | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | - | tig0025942:66176-66195 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | + | tig0025942:66548-66567 | Msa1426120:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | - | tig0025942:66671-66690 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | + | tig0025942:66671-66690 | Msa1426120:CDS | 40.0% |
| TATTCACCGGAAAGATTGAG+GGG | - | tig0025942:66919-66938 | None:intergenic | 40.0% | |
| CAATTATCTTGCAAGAGCAG+AGG | + | tig0025942:66959-66978 | Msa1426120:three_prime_UTR | 40.0% | |
| ! | TAGTTCTGCTTGGAGGAAAT+CGG | - | tig0025942:65481-65500 | None:intergenic | 40.0% |
| !! | GATCGAGAATTAGTTCTGCT+TGG | - | tig0025942:65491-65510 | None:intergenic | 40.0% |
| GAACTAATTCTCGATCACCA+TGG | + | tig0025942:65495-65514 | Msa1426120:exon | 40.0% | |
| ACTAATTCTCGATCACCATG+GGG | + | tig0025942:65497-65516 | Msa1426120:exon | 40.0% | |
| TGTGAAGTTGTATTACCCCA+TGG | - | tig0025942:65515-65534 | None:intergenic | 40.0% | |
| ! | GAATGGAAGAAACCCTTTTC+TGG | + | tig0025942:66144-66163 | Msa1426120:CDS | 40.0% |
| CAAGAACAATTCCCTTAGCA+TGG | - | tig0025942:66176-66195 | None:intergenic | 40.0% | |
| !! | GGTTGTTGATGATGGTTTGT+AGG | + | tig0025942:66548-66567 | Msa1426120:intron | 40.0% |
| TCTTCTCCTTGAAAAGAGCA+AGG | - | tig0025942:66671-66690 | None:intergenic | 40.0% | |
| !! | TGCTCTTTTCAAGGAGAAGA+AGG | + | tig0025942:66671-66690 | Msa1426120:CDS | 40.0% |
| TATTCACCGGAAAGATTGAG+GGG | - | tig0025942:66919-66938 | None:intergenic | 40.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | - | tig0025942:65488-65507 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | + | tig0025942:66036-66055 | Msa1426120:intron | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | + | tig0025942:66042-66061 | Msa1426120:intron | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | + | tig0025942:66086-66105 | Msa1426120:CDS | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | - | tig0025942:66159-66178 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | - | tig0025942:66160-66179 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | + | tig0025942:66161-66180 | Msa1426120:CDS | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | + | tig0025942:66162-66181 | Msa1426120:CDS | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | - | tig0025942:66331-66350 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | - | tig0025942:66332-66351 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | + | tig0025942:66336-66355 | Msa1426120:CDS | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | - | tig0025942:66341-66360 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | - | tig0025942:66395-66414 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | + | tig0025942:66567-66586 | Msa1426120:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | + | tig0025942:66573-66592 | Msa1426120:CDS | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | + | tig0025942:66582-66601 | Msa1426120:CDS | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | + | tig0025942:66606-66625 | Msa1426120:CDS | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | + | tig0025942:66613-66632 | Msa1426120:CDS | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | + | tig0025942:66620-66639 | Msa1426120:CDS | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | + | tig0025942:66636-66655 | Msa1426120:CDS | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | + | tig0025942:66662-66681 | Msa1426120:CDS | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | + | tig0025942:66696-66715 | Msa1426120:exon | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | + | tig0025942:66697-66716 | Msa1426120:exon | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | - | tig0025942:66702-66721 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | + | tig0025942:66701-66720 | Msa1426120:exon | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | - | tig0025942:66918-66937 | None:intergenic | 45.0% | |
| !! | CGAGAATTAGTTCTGCTTGG+AGG | - | tig0025942:65488-65507 | None:intergenic | 45.0% |
| TTTGTCTGCAGGAAGACAAG+AGG | + | tig0025942:66036-66055 | Msa1426120:intron | 45.0% | |
| TGCAGGAAGACAAGAGGAAT+GGG | + | tig0025942:66042-66061 | Msa1426120:intron | 45.0% | |
| ACTCCGTATCAAGCAAAGGT+GGG | + | tig0025942:66086-66105 | Msa1426120:CDS | 45.0% | |
| GCATGGGATGAACCAGAAAA+GGG | - | tig0025942:66159-66178 | None:intergenic | 45.0% | |
| AGCATGGGATGAACCAGAAA+AGG | - | tig0025942:66160-66179 | None:intergenic | 45.0% | |
| !! | TTCTGGTTCATCCCATGCTA+AGG | + | tig0025942:66161-66180 | Msa1426120:CDS | 45.0% |
| ! | TCTGGTTCATCCCATGCTAA+GGG | + | tig0025942:66162-66181 | Msa1426120:CDS | 45.0% |
| CACTTACGAATGGCAGAGTT+GGG | - | tig0025942:66331-66350 | None:intergenic | 45.0% | |
| ACACTTACGAATGGCAGAGT+TGG | - | tig0025942:66332-66351 | None:intergenic | 45.0% | |
| TGCCATTCGTAAGTGTGCTA+GGG | + | tig0025942:66336-66355 | Msa1426120:CDS | 45.0% | |
| AACCCTAGCACACTTACGAA+TGG | - | tig0025942:66341-66360 | None:intergenic | 45.0% | |
| ! | GCAACCATCATTTGGGACAA+AGG | - | tig0025942:66395-66414 | None:intergenic | 45.0% |
| TAGGATGAAGTCTTGATCGC+TGG | + | tig0025942:66567-66586 | Msa1426120:intron | 45.0% | |
| GAAGTCTTGATCGCTGGATT+TGG | + | tig0025942:66573-66592 | Msa1426120:CDS | 45.0% | |
| ATCGCTGGATTTGGACGTAA+AGG | + | tig0025942:66582-66601 | Msa1426120:CDS | 45.0% | |
| !! | CATGCTGTTGGTGATATTCC+TGG | + | tig0025942:66606-66625 | Msa1426120:CDS | 45.0% |
| ! | TTGGTGATATTCCTGGAGTC+AGG | + | tig0025942:66613-66632 | Msa1426120:CDS | 45.0% |
| TATTCCTGGAGTCAGGTTCA+AGG | + | tig0025942:66620-66639 | Msa1426120:CDS | 45.0% | |
| TTCAAGGTCGTGAAGGTTTC+TGG | + | tig0025942:66636-66655 | Msa1426120:CDS | 45.0% | |
| ! | CTCTCTCCTTGCTCTTTTCA+AGG | + | tig0025942:66662-66681 | Msa1426120:CDS | 45.0% |
| AAGCCTAGGTCTTGAAGTTG+TGG | + | tig0025942:66696-66715 | Msa1426120:exon | 45.0% | |
| AGCCTAGGTCTTGAAGTTGT+GGG | + | tig0025942:66697-66716 | Msa1426120:exon | 45.0% | |
| ATCCCACAACTTCAAGACCT+AGG | - | tig0025942:66702-66721 | None:intergenic | 45.0% | |
| TAGGTCTTGAAGTTGTGGGA+TGG | + | tig0025942:66701-66720 | Msa1426120:exon | 45.0% | |
| ATTCACCGGAAAGATTGAGG+GGG | - | tig0025942:66918-66937 | None:intergenic | 45.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | + | tig0025942:66041-66060 | Msa1426120:intron | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | + | tig0025942:66082-66101 | Msa1426120:CDS | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | + | tig0025942:66085-66104 | Msa1426120:CDS | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | - | tig0025942:66092-66111 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | + | tig0025942:66335-66354 | Msa1426120:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | + | tig0025942:66388-66407 | Msa1426120:CDS | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | + | tig0025942:66594-66613 | Msa1426120:CDS | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | + | tig0025942:66629-66648 | Msa1426120:CDS | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | + | tig0025942:66682-66701 | Msa1426120:CDS | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | - | tig0025942:66917-66936 | None:intergenic | 50.0% | |
| CTGCAGGAAGACAAGAGGAA+TGG | + | tig0025942:66041-66060 | Msa1426120:intron | 50.0% | |
| GGAGACTCCGTATCAAGCAA+AGG | + | tig0025942:66082-66101 | Msa1426120:CDS | 50.0% | |
| GACTCCGTATCAAGCAAAGG+TGG | + | tig0025942:66085-66104 | Msa1426120:CDS | 50.0% | |
| CAGCCCACCTTTGCTTGATA+CGG | - | tig0025942:66092-66111 | None:intergenic | 50.0% | |
| CTGCCATTCGTAAGTGTGCT+AGG | + | tig0025942:66335-66354 | Msa1426120:CDS | 50.0% | |
| GCTGCCTTTGTCCCAAATGA+TGG | + | tig0025942:66388-66407 | Msa1426120:CDS | 50.0% | |
| GGACGTAAAGGTCATGCTGT+TGG | + | tig0025942:66594-66613 | Msa1426120:CDS | 50.0% | |
| AGTCAGGTTCAAGGTCGTGA+AGG | + | tig0025942:66629-66648 | Msa1426120:CDS | 50.0% | |
| AGGAGAAGAAGGAGAAGCCT+AGG | + | tig0025942:66682-66701 | Msa1426120:CDS | 50.0% | |
| TTCACCGGAAAGATTGAGGG+GGG | - | tig0025942:66917-66936 | None:intergenic | 50.0% | |
| ACGACCTTGAACCTGACTCC+AGG | - | tig0025942:66627-66646 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | - | tig0025942:66916-66935 | None:intergenic | 55.0% | |
| ACGACCTTGAACCTGACTCC+AGG | - | tig0025942:66627-66646 | None:intergenic | 55.0% | |
| TCACCGGAAAGATTGAGGGG+GGG | - | tig0025942:66916-66935 | None:intergenic | 55.0% | |
| ACCGGAAAGATTGAGGGGGG+GGG | - | tig0025942:66914-66933 | None:intergenic | 60.0% | |
| CACCGGAAAGATTGAGGGGG+GGG | - | tig0025942:66915-66934 | None:intergenic | 60.0% | |
| ACCGGAAAGATTGAGGGGGG+GGG | - | tig0025942:66914-66933 | None:intergenic | 60.0% | |
| CACCGGAAAGATTGAGGGGG+GGG | - | tig0025942:66915-66934 | None:intergenic | 60.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | + | tig0025942:66061-66080 | Msa1426120:CDS | 65.0% | |
| GGAAAGATTGAGGGGGGGGG+GGG | - | tig0025942:66911-66930 | None:intergenic | 65.0% | |
| CGGAAAGATTGAGGGGGGGG+GGG | - | tig0025942:66912-66931 | None:intergenic | 65.0% | |
| CCGGAAAGATTGAGGGGGGG+GGG | - | tig0025942:66913-66932 | None:intergenic | 65.0% | |
| CCCCCCCCCCTCAATCTTTC+CGG | + | tig0025942:66910-66929 | Msa1426120:three_prime_UTR | 65.0% | |
| TGGGAGCTGCTCGCAAGCTG+AGG | + | tig0025942:66061-66080 | Msa1426120:CDS | 65.0% | |
| GGAAAGATTGAGGGGGGGGG+GGG | - | tig0025942:66911-66930 | None:intergenic | 65.0% | |
| CGGAAAGATTGAGGGGGGGG+GGG | - | tig0025942:66912-66931 | None:intergenic | 65.0% | |
| CCGGAAAGATTGAGGGGGGG+GGG | - | tig0025942:66913-66932 | None:intergenic | 65.0% | |
| CCCCCCCCCCTCAATCTTTC+CGG | + | tig0025942:66910-66929 | Msa1426120:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025942 | gene | 65434 | 66978 | 65434 | ID=Msa1426120;Name=Msa1426120 |
| tig0025942 | mRNA | 65434 | 66978 | 65434 | ID=Msa1426120-mRNA-1;Parent=Msa1426120;Name=Msa1426120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=80|1|1|1|1|1|4|268|142 |
| tig0025942 | exon | 65434 | 65518 | 65434 | ID=Msa1426120-mRNA-1:exon:4660;Parent=Msa1426120-mRNA-1 |
| tig0025942 | exon | 66047 | 66202 | 66047 | ID=Msa1426120-mRNA-1:exon:4661;Parent=Msa1426120-mRNA-1 |
| tig0025942 | exon | 66309 | 66435 | 66309 | ID=Msa1426120-mRNA-1:exon:4662;Parent=Msa1426120-mRNA-1 |
| tig0025942 | exon | 66570 | 66978 | 66570 | ID=Msa1426120-mRNA-1:exon:4663;Parent=Msa1426120-mRNA-1 |
| tig0025942 | five_prime_UTR | 65434 | 65513 | 65434 | ID=Msa1426120-mRNA-1:five_prime_utr;Parent=Msa1426120-mRNA-1 |
| tig0025942 | CDS | 65514 | 65518 | 65514 | ID=Msa1426120-mRNA-1:cds;Parent=Msa1426120-mRNA-1 |
| tig0025942 | CDS | 66047 | 66202 | 66047 | ID=Msa1426120-mRNA-1:cds;Parent=Msa1426120-mRNA-1 |
| tig0025942 | CDS | 66309 | 66435 | 66309 | ID=Msa1426120-mRNA-1:cds;Parent=Msa1426120-mRNA-1 |
| tig0025942 | CDS | 66570 | 66710 | 66570 | ID=Msa1426120-mRNA-1:cds;Parent=Msa1426120-mRNA-1 |
| tig0025942 | three_prime_UTR | 66711 | 66978 | 66711 | ID=Msa1426120-mRNA-1:three_prime_utr;Parent=Msa1426120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
