Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167540 | XP_013450065.1 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.32e-112 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167540 | sp|O65743|RL24_CICAR | 95.706 | 163 | 6 | 1 | 1 | 162 | 1 | 163 | 9.90e-110 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167540 | I3SKQ8 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 6.33e-113 | 327 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1167540 | 0.832805 | 7.667053e-56 | -8.615850e-47 |
| Msa0002790 | Msa1167540 | 0.852490 | 4.461805e-61 | -8.615850e-47 |
| Msa0011740 | Msa1167540 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa0022970 | Msa1167540 | 0.806427 | 8.271870e-50 | -8.615850e-47 |
| Msa0027590 | Msa1167540 | 0.804556 | 2.040977e-49 | -8.615850e-47 |
| Msa0032780 | Msa1167540 | 0.849900 | 2.402026e-60 | -8.615850e-47 |
| Msa0040220 | Msa1167540 | 0.848630 | 5.424129e-60 | -8.615850e-47 |
| Msa0044890 | Msa1167540 | 0.830483 | 2.862943e-55 | -8.615850e-47 |
| Msa0045730 | Msa1167540 | 0.817423 | 3.323639e-52 | -8.615850e-47 |
| Msa0047650 | Msa1167540 | 0.823094 | 1.666394e-53 | -8.615850e-47 |
| Msa0068970 | Msa1167540 | 0.844000 | 9.913120e-59 | -8.615850e-47 |
| Msa0074030 | Msa1167540 | 0.811250 | 7.689795e-51 | -8.615850e-47 |
| Msa0075350 | Msa1167540 | 0.802507 | 5.429177e-49 | -8.615850e-47 |
| Msa0087910 | Msa1167540 | 0.863806 | 1.913516e-64 | -8.615850e-47 |
| Msa0116130 | Msa1167540 | 0.809481 | 1.852662e-50 | -8.615850e-47 |
| Msa0116670 | Msa1167540 | 0.860979 | 1.415861e-63 | -8.615850e-47 |
| Msa0608260 | Msa1167540 | 0.834101 | 3.642102e-56 | -8.615850e-47 |
| Msa0622750 | Msa1167540 | 0.839481 | 1.544346e-57 | -8.615850e-47 |
| Msa0623200 | Msa1167540 | 0.804746 | 1.862724e-49 | -8.615850e-47 |
| Msa0643820 | Msa1167540 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0653060 | Msa1167540 | 0.841325 | 5.089226e-58 | -8.615850e-47 |
| Msa0691330 | Msa1167540 | 0.825890 | 3.662094e-54 | -8.615850e-47 |
| Msa0694400 | Msa1167540 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0705800 | Msa1167540 | 0.845138 | 4.894330e-59 | -8.615850e-47 |
| Msa0712610 | Msa1167540 | 0.854764 | 9.901235e-62 | -8.615850e-47 |
| Msa0717380 | Msa1167540 | 0.845485 | 3.944346e-59 | -8.615850e-47 |
| Msa0780490 | Msa1167540 | 0.801860 | 7.377847e-49 | -8.615850e-47 |
| Msa0781080 | Msa1167540 | 0.825930 | 3.582270e-54 | -8.615850e-47 |
| Msa0788380 | Msa1167540 | 0.846650 | 1.901264e-59 | -8.615850e-47 |
| Msa0792420 | Msa1167540 | 0.843929 | 1.035289e-58 | -8.615850e-47 |
| Msa0799830 | Msa1167540 | 0.850709 | 1.424905e-60 | -8.615850e-47 |
| Msa0128330 | Msa1167540 | 0.823973 | 1.037848e-53 | -8.615850e-47 |
| Msa0128750 | Msa1167540 | 0.821032 | 5.007617e-53 | -8.615850e-47 |
| Msa0133540 | Msa1167540 | 0.856222 | 3.723341e-62 | -8.615850e-47 |
| Msa0134580 | Msa1167540 | 0.833289 | 5.807649e-56 | -8.615850e-47 |
| Msa0167860 | Msa1167540 | 0.809379 | 1.948454e-50 | -8.615850e-47 |
| Msa0172900 | Msa1167540 | 0.810478 | 1.129855e-50 | -8.615850e-47 |
| Msa0173530 | Msa1167540 | 0.859166 | 4.990339e-63 | -8.615850e-47 |
| Msa0174580 | Msa1167540 | 0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa0181490 | Msa1167540 | 0.849565 | 2.979570e-60 | -8.615850e-47 |
| Msa0183090 | Msa1167540 | 0.811843 | 5.716132e-51 | -8.615850e-47 |
| Msa0191450 | Msa1167540 | 0.811361 | 7.275489e-51 | -8.615850e-47 |
| Msa0191550 | Msa1167540 | 0.808580 | 2.888041e-50 | -8.615850e-47 |
| Msa0194940 | Msa1167540 | 0.875334 | 3.344605e-68 | -8.615850e-47 |
| Msa0210330 | Msa1167540 | 0.874584 | 6.024166e-68 | -8.615850e-47 |
| Msa0210360 | Msa1167540 | 0.892209 | 1.959257e-74 | -8.615850e-47 |
| Msa0221030 | Msa1167540 | 0.814016 | 1.909406e-51 | -8.615850e-47 |
| Msa0222730 | Msa1167540 | 0.869844 | 2.283177e-66 | -8.615850e-47 |
| Msa0223440 | Msa1167540 | 0.826874 | 2.135136e-54 | -8.615850e-47 |
| Msa0230490 | Msa1167540 | 0.819743 | 9.895337e-53 | -8.615850e-47 |
| Msa0369410 | Msa1167540 | 0.844659 | 6.594111e-59 | -8.615850e-47 |
| Msa0426090 | Msa1167540 | 0.837272 | 5.732777e-57 | -8.615850e-47 |
| Msa0426250 | Msa1167540 | 0.852506 | 4.414115e-61 | -8.615850e-47 |
| Msa0463520 | Msa1167540 | 0.850651 | 1.479382e-60 | -8.615850e-47 |
| Msa0471880 | Msa1167540 | 0.843476 | 1.368869e-58 | -8.615850e-47 |
| Msa0472480 | Msa1167540 | 0.827835 | 1.256284e-54 | -8.615850e-47 |
| Msa0475810 | Msa1167540 | 0.850762 | 1.376899e-60 | -8.615850e-47 |
| Msa0481520 | Msa1167540 | 0.879700 | 1.005564e-69 | -8.615850e-47 |
| Msa0481850 | Msa1167540 | 0.837918 | 3.914281e-57 | -8.615850e-47 |
| Msa1037290 | Msa1167540 | 0.840815 | 6.928386e-58 | -8.615850e-47 |
| Msa1040160 | Msa1167540 | 0.871659 | 5.775068e-67 | -8.615850e-47 |
| Msa1041680 | Msa1167540 | 0.806282 | 8.874245e-50 | -8.615850e-47 |
| Msa1078870 | Msa1167540 | 0.865822 | 4.466394e-65 | -8.615850e-47 |
| Msa1078980 | Msa1167540 | 0.850426 | 1.711675e-60 | -8.615850e-47 |
| Msa1079920 | Msa1167540 | 0.896611 | 3.123627e-76 | -8.615850e-47 |
| Msa1080350 | Msa1167540 | 0.831859 | 1.314683e-55 | -8.615850e-47 |
| Msa1082170 | Msa1167540 | 0.829046 | 6.406656e-55 | -8.615850e-47 |
| Msa1083370 | Msa1167540 | 0.870849 | 1.069197e-66 | -8.615850e-47 |
| Msa1088490 | Msa1167540 | 0.830311 | 3.154590e-55 | -8.615850e-47 |
| Msa1096900 | Msa1167540 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0257450 | Msa1167540 | 0.821132 | 4.750198e-53 | -8.615850e-47 |
| Msa0264010 | Msa1167540 | 0.829597 | 4.709975e-55 | -8.615850e-47 |
| Msa0264640 | Msa1167540 | 0.807220 | 5.622194e-50 | -8.615850e-47 |
| Msa0269180 | Msa1167540 | 0.807691 | 4.466659e-50 | -8.615850e-47 |
| Msa0289580 | Msa1167540 | 0.813973 | 1.951383e-51 | -8.615850e-47 |
| Msa0289610 | Msa1167540 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0297830 | Msa1167540 | 0.859232 | 4.769721e-63 | -8.615850e-47 |
| Msa0301220 | Msa1167540 | 0.855174 | 7.530887e-62 | -8.615850e-47 |
| Msa0306690 | Msa1167540 | 0.836913 | 7.081325e-57 | -8.615850e-47 |
| Msa0312210 | Msa1167540 | 0.834417 | 3.034399e-56 | -8.615850e-47 |
| Msa0315430 | Msa1167540 | 0.826985 | 2.008779e-54 | -8.615850e-47 |
| Msa0327300 | Msa1167540 | 0.835028 | 2.130141e-56 | -8.615850e-47 |
| Msa0327330 | Msa1167540 | 0.802392 | 5.732596e-49 | -8.615850e-47 |
| Msa0335840 | Msa1167540 | 0.868061 | 8.639446e-66 | -8.615850e-47 |
| Msa0341880 | Msa1167540 | 0.833642 | 4.742712e-56 | -8.615850e-47 |
| Msa0342850 | Msa1167540 | 0.850189 | 1.994505e-60 | -8.615850e-47 |
| Msa1124850 | Msa1167540 | 0.886290 | 3.890042e-72 | -8.615850e-47 |
| Msa1125860 | Msa1167540 | 0.826407 | 2.760015e-54 | -8.615850e-47 |
| Msa1126060 | Msa1167540 | 0.823804 | 1.136845e-53 | -8.615850e-47 |
| Msa1126520 | Msa1167540 | 0.839545 | 1.486117e-57 | -8.615850e-47 |
| Msa1128120 | Msa1167540 | 0.838147 | 3.417322e-57 | -8.615850e-47 |
| Msa1164150 | Msa1167540 | 0.831805 | 1.355770e-55 | -8.615850e-47 |
| Msa1165640 | Msa1167540 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa1166570 | Msa1167540 | 0.814122 | 1.809486e-51 | -8.615850e-47 |
| Msa1167540 | Msa1167550 | 0.894063 | 3.505346e-75 | -8.615850e-47 |
| Msa1167540 | Msa1169180 | 0.850511 | 1.619463e-60 | -8.615850e-47 |
| Msa1167540 | Msa1180000 | 0.817593 | 3.043019e-52 | -8.615850e-47 |
| Msa1167540 | Msa1186030 | 0.821588 | 3.728263e-53 | -8.615850e-47 |
| Msa1167540 | Msa1188260 | 0.823144 | 1.622222e-53 | -8.615850e-47 |
| Msa1167540 | Msa1203560 | 0.857327 | 1.759759e-62 | -8.615850e-47 |
| Msa1167540 | Msa1208330 | 0.802385 | 5.753180e-49 | -8.615850e-47 |
| Msa1167540 | Msa1215820 | 0.841147 | 5.668215e-58 | -8.615850e-47 |
| Msa1167540 | Msa1240270 | 0.809662 | 1.693717e-50 | -8.615850e-47 |
| Msa1167540 | Msa1258540 | 0.836784 | 7.636547e-57 | -8.615850e-47 |
| Msa1167540 | Msa1266060 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa1167540 | Msa1270640 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
| Msa1167540 | Msa1270710 | 0.810469 | 1.134819e-50 | -8.615850e-47 |
| Msa1167540 | Msa1295150 | 0.873605 | 1.292129e-67 | -8.615850e-47 |
| Msa1167540 | Msa1295170 | 0.849128 | 3.943504e-60 | -8.615850e-47 |
| Msa1167540 | Msa1311400 | 0.883984 | 2.823797e-71 | -8.615850e-47 |
| Msa1167540 | Msa1321790 | 0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa1167540 | Msa1332250 | 0.859855 | 3.097885e-63 | -8.615850e-47 |
| Msa1167540 | Msa1338190 | 0.803770 | 2.974343e-49 | -8.615850e-47 |
| Msa1167540 | Msa1356790 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa1167540 | Msa1362790 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
| Msa1167540 | Msa1366180 | 0.827031 | 1.957886e-54 | -8.615850e-47 |
| Msa1167540 | Msa1368920 | 0.839055 | 1.991504e-57 | -8.615850e-47 |
| Msa1167540 | Msa1392590 | 0.820396 | 7.011409e-53 | -8.615850e-47 |
| Msa1167540 | Msa1397100 | 0.842642 | 2.282525e-58 | -8.615850e-47 |
| Msa1167540 | Msa1403910 | 0.854123 | 1.517347e-61 | -8.615850e-47 |
| Msa1167540 | Msa1410440 | 0.805997 | 1.018709e-49 | -8.615850e-47 |
| Msa1167540 | Msa1418770 | 0.811069 | 8.418586e-51 | -8.615850e-47 |
| Msa1167540 | Msa1426120 | 0.869535 | 2.878367e-66 | -8.615850e-47 |
| Msa1167540 | Msa1426490 | 0.845882 | 3.078518e-59 | -8.615850e-47 |
| Msa1167540 | Msa1446410 | 0.813012 | 3.174246e-51 | -8.615850e-47 |
| Msa1167540 | Msa1463570 | 0.832237 | 1.060338e-55 | -8.615850e-47 |
| Msa0483110 | Msa1167540 | 0.816005 | 6.911821e-52 | -8.615850e-47 |
| Msa0486070 | Msa1167540 | 0.830974 | 2.170051e-55 | -8.615850e-47 |
| Msa0529900 | Msa1167540 | 0.856320 | 3.484409e-62 | -8.615850e-47 |
| Msa0544720 | Msa1167540 | 0.820721 | 5.904710e-53 | -8.615850e-47 |
| Msa0550420 | Msa1167540 | 0.804170 | 2.456953e-49 | -8.615850e-47 |
| Msa0584030 | Msa1167540 | 0.803438 | 3.486290e-49 | -8.615850e-47 |
| Msa0861320 | Msa1167540 | 0.816725 | 4.768767e-52 | -8.615850e-47 |
| Msa0867060 | Msa1167540 | 0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0876170 | Msa1167540 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0915540 | Msa1167540 | 0.808061 | 3.725973e-50 | -8.615850e-47 |
| Msa0930490 | Msa1167540 | 0.827868 | 1.233712e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167540 | MtrunA17_Chr7g0265501 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.22e-116 | 327 |
| Msa1167540 | MtrunA17_Chr7g0265491 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.22e-116 | 327 |
| Msa1167540 | MtrunA17_Chr1g0179601 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 1.90e-89 | 258 |
| Msa1167540 | MtrunA17_Chr4g0027111 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 8.23e-19 | 78.6 |
| Msa1167540 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 56 | 96 | 1 | 40 | 9.29e-17 | 69.7 |
| Msa1167540 | MtrunA17_Chr2g0321011 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 2.43e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167540 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.42e-88 | 256 |
| Msa1167540 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.66e-84 | 244 |
| Msa1167540 | AT2G44860.2 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.35e-18 | 77.0 |
| Msa1167540 | AT2G44860.1 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.35e-18 | 77.0 |
Find 73 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAAATCAATTTAATATC+TGG | 0.154677 | 7_4:+60035566 | None:intergenic |
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7_4:+60035806 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7_4:-60035729 | Msa1167540:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_4:-60035742 | Msa1167540:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_4:+60036166 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_4:+60036523 | None:intergenic |
| CTGATCCTGGTTACAATGTT+TGG | 0.332668 | 7_4:-60032156 | Msa1167540:three_prime_UTR |
| AATCATAATAAAGATGTATT+AGG | 0.340985 | 7_4:-60032094 | Msa1167540:three_prime_UTR |
| TGATAAAACAGTAACATAAA+AGG | 0.351434 | 7_4:+60035617 | None:intergenic |
| TTTACAGCTGCCTCCATGAT+AGG | 0.356329 | 7_4:+60032115 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_4:+60036229 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_4:+60036545 | None:intergenic |
| CTGCCTCCATGATAGGGAAT+AGG | 0.360134 | 7_4:+60032122 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7_4:-60035802 | Msa1167540:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7_4:-60036262 | Msa1167540:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_4:+60036776 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_4:-60035789 | Msa1167540:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_4:+60036221 | None:intergenic |
| ATCAAGCAAACAAAATATAT+CGG | 0.421334 | 7_4:+60035643 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_4:-60036759 | Msa1167540:intron |
| GCAAAATCAATTTAATATCT+GGG | 0.429649 | 7_4:+60035567 | None:intergenic |
| AAGTGCCAAGCTAGGACTTT+AGG | 0.435076 | 7_4:+60032182 | None:intergenic |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_4:+60036157 | None:intergenic |
| TGCCTCCATGATAGGGAATA+GGG | 0.443848 | 7_4:+60032123 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7_4:-60035732 | Msa1167540:CDS |
| ATGTTCCCTATTCCCTATCA+TGG | 0.455556 | 7_4:-60032128 | Msa1167540:three_prime_UTR |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_4:-60036589 | Msa1167540:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7_4:-60036788 | Msa1167540:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_4:+60036561 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_4:-60035741 | Msa1167540:CDS |
| TGTGGCCTAAAGTCCTAGCT+TGG | 0.480427 | 7_4:-60032187 | Msa1167540:three_prime_UTR |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_4:-60036142 | Msa1167540:intron |
| AAACTAATATCAAAAGCTCT+TGG | 0.496634 | 7_4:+60037448 | None:intergenic |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_4:-60036221 | Msa1167540:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7_4:-60035862 | Msa1167540:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_4:+60036158 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7_4:-60035728 | Msa1167540:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_4:-60036157 | Msa1167540:CDS |
| TTACAGCTGCCTCCATGATA+GGG | 0.537899 | 7_4:+60032116 | None:intergenic |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_4:-60036156 | Msa1167540:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_4:+60036232 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_4:+60036777 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_4:-60036550 | Msa1167540:CDS |
| CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_4:-60037396 | Msa1167540:exon |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7_4:+60035797 | None:intergenic |
| CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_4:+60037396 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7_4:-60035769 | Msa1167540:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_4:+60036208 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_4:-60035735 | Msa1167540:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_4:-60035754 | Msa1167540:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7_4:-60035784 | Msa1167540:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_4:-60036787 | Msa1167540:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_4:-60036812 | Msa1167540:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_4:-60036232 | Msa1167540:CDS |
| TGGCTGCTTCGTTGATGTGG+TGG | 0.600894 | 7_4:+60037399 | None:intergenic |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_4:-60035753 | Msa1167540:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_4:+60037379 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_4:+60036237 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_4:-60035788 | Msa1167540:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_4:+60036214 | None:intergenic |
| ATCAGCGTAAGTGCCAAGCT+AGG | 0.620576 | 7_4:+60032174 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7_4:-60035783 | Msa1167540:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7_4:-60036794 | Msa1167540:CDS |
| ATTTGCCAAACATTGTAACC+AGG | 0.635652 | 7_4:+60032151 | None:intergenic |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_4:-60036174 | Msa1167540:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7_4:-60036273 | Msa1167540:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7_4:-60036519 | Msa1167540:intron |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_4:-60035738 | Msa1167540:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7_4:-60035768 | Msa1167540:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7_4:-60035814 | Msa1167540:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_4:-60035841 | Msa1167540:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7_4:-60035857 | Msa1167540:intron |
| TTCCCTATTCCCTATCATGG+AGG | 0.714859 | 7_4:-60032125 | Msa1167540:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | - | chr7_4:60033413-60033432 | Msa1167540:intron | 10.0% |
| !!! | TAAAATCAATTTTTATTGAA+TGG | - | chr7_4:60034170-60034189 | Msa1167540:intron | 10.0% |
| !! | TAGATTTAACAATAAATTTA+AGG | + | chr7_4:60035670-60035689 | None:intergenic | 10.0% |
| !!! | AATGTGTTTTAATATATAAA+GGG | + | chr7_4:60036717-60036736 | None:intergenic | 10.0% |
| !!! | AAATGTGTTTTAATATATAA+AGG | + | chr7_4:60036718-60036737 | None:intergenic | 10.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | - | chr7_4:60032260-60032279 | Msa1167540:intron | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | + | chr7_4:60032444-60032463 | None:intergenic | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | - | chr7_4:60032839-60032858 | Msa1167540:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | - | chr7_4:60032865-60032884 | Msa1167540:intron | 15.0% |
| !! | AAAGAAAAAAAAAAAAAGAG+AGG | + | chr7_4:60033402-60033421 | None:intergenic | 15.0% |
| !!! | GAAAACAAACTATATTTTAA+TGG | + | chr7_4:60033812-60033831 | None:intergenic | 15.0% |
| !! | CTAAGGTTAAAAATATTATT+TGG | - | chr7_4:60036176-60036195 | Msa1167540:CDS | 15.0% |
| !!! | AAAAGAAAATTAAGTTTTGT+TGG | - | chr7_4:60036424-60036443 | Msa1167540:intron | 15.0% |
| !! | TAAAATTATAAGGGTAAAAA+TGG | + | chr7_4:60036677-60036696 | None:intergenic | 15.0% |
| !!! | GGTTTTAACTAAAATTATAA+GGG | + | chr7_4:60036686-60036705 | None:intergenic | 15.0% |
| !! | AAAATTCAAGTATAAAATAG+AGG | + | chr7_4:60036846-60036865 | None:intergenic | 15.0% |
| !! | TTAAAGTATAAAAATGGAAA+TGG | - | chr7_4:60036868-60036887 | Msa1167540:intron | 15.0% |
| !! | AAATGTAAAATGACATAAAA+GGG | + | chr7_4:60037019-60037038 | None:intergenic | 15.0% |
| !! | TAAATGTAAAATGACATAAA+AGG | + | chr7_4:60037020-60037039 | None:intergenic | 15.0% |
| !! | GACTTAAAAAATGTTTAATT+TGG | + | chr7_4:60037260-60037279 | None:intergenic | 15.0% |
| !! | AATCATAATAAAGATGTATT+AGG | - | chr7_4:60037392-60037411 | Msa1167540:exon | 15.0% |
| !!! | AGCTTTTGATATTAGTTTTT+AGG | - | chr7_4:60032043-60032062 | Msa1167540:three_prime_UTR | 20.0% |
| !!! | GCTTTTGATATTAGTTTTTA+GGG | - | chr7_4:60032044-60032063 | Msa1167540:three_prime_UTR | 20.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | + | chr7_4:60032148-60032167 | None:intergenic | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | - | chr7_4:60032148-60032167 | Msa1167540:three_prime_UTR | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | - | chr7_4:60032149-60032168 | Msa1167540:three_prime_UTR | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | + | chr7_4:60032358-60032377 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | + | chr7_4:60032359-60032378 | None:intergenic | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | - | chr7_4:60032410-60032429 | Msa1167540:intron | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | - | chr7_4:60032448-60032467 | Msa1167540:intron | 20.0% |
| !!! | ATTTTAATGGTAACCAAAAA+TGG | + | chr7_4:60033799-60033818 | None:intergenic | 20.0% |
| !! | ATCAAGCAAACAAAATATAT+CGG | + | chr7_4:60033846-60033865 | None:intergenic | 20.0% |
| !! | TGATAAAACAGTAACATAAA+AGG | + | chr7_4:60033872-60033891 | None:intergenic | 20.0% |
| !!! | TGTTTTATCAAACTTATGTT+TGG | - | chr7_4:60033882-60033901 | Msa1167540:intron | 20.0% |
| !! | GCAAAATCAATTTAATATCT+GGG | + | chr7_4:60033922-60033941 | None:intergenic | 20.0% |
| !! | AGCAAAATCAATTTAATATC+TGG | + | chr7_4:60033923-60033942 | None:intergenic | 20.0% |
| !!! | TGTTTGATTATAAGTTTTAC+TGG | - | chr7_4:60034000-60034019 | Msa1167540:intron | 20.0% |
| !! | TATCATTATCTATTTAGAAG+AGG | - | chr7_4:60034693-60034712 | Msa1167540:intron | 20.0% |
| !! | GATTAAACTATGTAACATTA+CGG | - | chr7_4:60034739-60034758 | Msa1167540:intron | 20.0% |
| !! | TTAATTCTAGTGAGAAAAAT+TGG | - | chr7_4:60034854-60034873 | Msa1167540:intron | 20.0% |
| !! | TATATAAACACTTACTAGTT+GGG | + | chr7_4:60034953-60034972 | None:intergenic | 20.0% |
| !! | TTATATAAACACTTACTAGT+TGG | + | chr7_4:60034954-60034973 | None:intergenic | 20.0% |
| !! | AACTAGTAAGTGTTTATATA+AGG | - | chr7_4:60034953-60034972 | Msa1167540:intron | 20.0% |
| !! | ACTAGTAAGTGTTTATATAA+GGG | - | chr7_4:60034954-60034973 | Msa1167540:intron | 20.0% |
| !! | GTTTCTTAATTGTAAATATC+CGG | + | chr7_4:60035145-60035164 | None:intergenic | 20.0% |
| !! | TTTACTCAAAAAATAAGACT+TGG | - | chr7_4:60035963-60035982 | Msa1167540:intron | 20.0% |
| !! | CTTACAATAGAAAAATTACA+CGG | - | chr7_4:60036382-60036401 | Msa1167540:intron | 20.0% |
| !!! | GGGTTTTAACTAAAATTATA+AGG | + | chr7_4:60036687-60036706 | None:intergenic | 20.0% |
| !! | AATATATAAAGGGTAAAAGT+GGG | + | chr7_4:60036707-60036726 | None:intergenic | 20.0% |
| !! | TAATATATAAAGGGTAAAAG+TGG | + | chr7_4:60036708-60036727 | None:intergenic | 20.0% |
| !!! | GATAAACTAATTAAAGTGTT+TGG | + | chr7_4:60037068-60037087 | None:intergenic | 20.0% |
| !! | CTTCAAAAATTAACAATTGA+TGG | - | chr7_4:60037431-60037450 | Msa1167540:five_prime_UTR | 20.0% |
| !!! | TAAAACTTACTTTAGAACCA+TGG | + | chr7_4:60032110-60032129 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | + | chr7_4:60032509-60032528 | None:intergenic | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | - | chr7_4:60032530-60032549 | Msa1167540:intron | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | + | chr7_4:60032635-60032654 | None:intergenic | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | + | chr7_4:60032636-60032655 | None:intergenic | 25.0% |
| ! | GAGATAAAAATGATTCATGT+TGG | - | chr7_4:60032751-60032770 | Msa1167540:intron | 25.0% |
| !! | AAATGATTCATGTTGGATTT+TGG | - | chr7_4:60032758-60032777 | Msa1167540:intron | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | + | chr7_4:60033161-60033180 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | - | chr7_4:60033469-60033488 | Msa1167540:intron | 25.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | + | chr7_4:60033533-60033552 | None:intergenic | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | - | chr7_4:60033534-60033553 | Msa1167540:intron | 25.0% |
| !!! | AAATTGATTTTAAGACATCC+AGG | + | chr7_4:60034162-60034181 | None:intergenic | 25.0% |
| ! | GATTGTTTAATAGCAAATCA+TGG | - | chr7_4:60034192-60034211 | Msa1167540:intron | 25.0% |
| !! | AATTTTTGTAAGTTACAACC+TGG | - | chr7_4:60034352-60034371 | Msa1167540:intron | 25.0% |
| !! | CAATATGCTGTGAATTTTAA+AGG | - | chr7_4:60034495-60034514 | Msa1167540:intron | 25.0% |
| !!! | AGGGTTTGCTTTTAATTATA+TGG | + | chr7_4:60034525-60034544 | None:intergenic | 25.0% |
| ! | CCTTTATATCATTCAAACAT+GGG | + | chr7_4:60034797-60034816 | None:intergenic | 25.0% |
| ! | TCCTTTATATCATTCAAACA+TGG | + | chr7_4:60034798-60034817 | None:intergenic | 25.0% |
| ! | ATATAAACACTTACTAGTTG+GGG | + | chr7_4:60034952-60034971 | None:intergenic | 25.0% |
| ! | AGGTTAAAATCAATTGTAGA+AGG | + | chr7_4:60035650-60035669 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr7_4:60035775-60035794 | Msa1167540:CDS | 25.0% |
| !! | ATTTGGCTATTTGCAATTTT+TGG | + | chr7_4:60036006-60036025 | None:intergenic | 25.0% |
| ! | GAATCTCAAAATTCTATCTA+AGG | - | chr7_4:60036159-60036178 | Msa1167540:CDS | 25.0% |
| ! | CACATAACACATAGTTTAAA+GGG | + | chr7_4:60036261-60036280 | None:intergenic | 25.0% |
| ! | ATGTAAATTATTCTCTTCGT+TGG | + | chr7_4:60036287-60036306 | None:intergenic | 25.0% |
| !!! | AAAAGCTAAAAGCTCTTTTT+TGG | + | chr7_4:60036496-60036515 | None:intergenic | 25.0% |
| ! | AACAAAAAAAATAGAGGAAC+TGG | + | chr7_4:60036787-60036806 | None:intergenic | 25.0% |
| ! | AGTAGGAACAAAAAAAATAG+AGG | + | chr7_4:60036793-60036812 | None:intergenic | 25.0% |
| !! | AAAGTGTTTGGTAAAATTAG+AGG | + | chr7_4:60037056-60037075 | None:intergenic | 25.0% |
| !!! | TTTTTAGCACAAAAGTTTTG+TGG | - | chr7_4:60037281-60037300 | Msa1167540:intron | 25.0% |
| ! | TCAAGTACCCATCATATTTT+TGG | - | chr7_4:60032348-60032367 | Msa1167540:intron | 30.0% |
| CAAAATGCAATAACAGTGAA+TGG | + | chr7_4:60032577-60032596 | None:intergenic | 30.0% | |
| !!! | TTGCATTTTGATTGAACTAG+TGG | - | chr7_4:60032587-60032606 | Msa1167540:intron | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | - | chr7_4:60032588-60032607 | Msa1167540:intron | 30.0% |
| ATTTATTCGTAGTGATTCTC+AGG | - | chr7_4:60032727-60032746 | Msa1167540:intron | 30.0% | |
| !!! | TACATTTTGAGTTCACAAAG+AGG | + | chr7_4:60032895-60032914 | None:intergenic | 30.0% |
| TTGTGAACTCAAAATGTAAG+AGG | - | chr7_4:60032897-60032916 | Msa1167540:intron | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | + | chr7_4:60033051-60033070 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | + | chr7_4:60033137-60033156 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | + | chr7_4:60033155-60033174 | None:intergenic | 30.0% | |
| AATTGTGTAACAGGAAAAAC+AGG | + | chr7_4:60033578-60033597 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | + | chr7_4:60033587-60033606 | None:intergenic | 30.0% | |
| ! | GCGTTAAGTTTTTCCATTTT+TGG | - | chr7_4:60033783-60033802 | Msa1167540:intron | 30.0% |
| !!! | AGAATATGTTGTTTTAAGCC+TGG | - | chr7_4:60034141-60034160 | Msa1167540:intron | 30.0% |
| AACCTAAGTTAACAAACACT+CGG | + | chr7_4:60034262-60034281 | None:intergenic | 30.0% | |
| !! | TTAGGTTGAAAAAAGTTGTG+CGG | - | chr7_4:60034275-60034294 | Msa1167540:intron | 30.0% |
| !! | GGAATGAACAATTTTGAAAG+AGG | - | chr7_4:60034324-60034343 | Msa1167540:intron | 30.0% |
| GGATAATGTAATCCATTAGT+TGG | + | chr7_4:60034404-60034423 | None:intergenic | 30.0% | |
| !! | AGCATATTGACTTAGAAGTT+GGG | + | chr7_4:60034484-60034503 | None:intergenic | 30.0% |
| ATAACAAACGTTGAGATGAA+AGG | - | chr7_4:60034643-60034662 | Msa1167540:intron | 30.0% | |
| TAACAAACGTTGAGATGAAA+GGG | - | chr7_4:60034644-60034663 | Msa1167540:intron | 30.0% | |
| CATTATCTATTTAGAAGAGG+AGG | - | chr7_4:60034696-60034715 | Msa1167540:intron | 30.0% | |
| ACATAGTTTAATCCCATGTA+TGG | + | chr7_4:60034732-60034751 | None:intergenic | 30.0% | |
| TAAACTATGTAACATTACGG+AGG | - | chr7_4:60034742-60034761 | Msa1167540:intron | 30.0% | |
| CCCATGTTTGAATGATATAA+AGG | - | chr7_4:60034794-60034813 | Msa1167540:intron | 30.0% | |
| AGTAAGTGTTTATATAAGGG+TGG | - | chr7_4:60034957-60034976 | Msa1167540:intron | 30.0% | |
| GTAAGTGTTTATATAAGGGT+GGG | - | chr7_4:60034958-60034977 | Msa1167540:intron | 30.0% | |
| TAAGTGTTTATATAAGGGTG+GGG | - | chr7_4:60034959-60034978 | Msa1167540:intron | 30.0% | |
| ACGATTTATTAAAATCGCAC+AGG | + | chr7_4:60035297-60035316 | None:intergenic | 30.0% | |
| TTATACCGAACGAAATTACT+GGG | + | chr7_4:60035573-60035592 | None:intergenic | 30.0% | |
| ATTATACCGAACGAAATTAC+TGG | + | chr7_4:60035574-60035593 | None:intergenic | 30.0% | |
| ! | AAAGTAAAGTGGTTTGTGTT+TGG | + | chr7_4:60035710-60035729 | None:intergenic | 30.0% |
| AAATAAGACTTGGAATCTCA+AGG | - | chr7_4:60035973-60035992 | Msa1167540:intron | 30.0% | |
| AATAAGACTTGGAATCTCAA+GGG | - | chr7_4:60035974-60035993 | Msa1167540:intron | 30.0% | |
| ! | CATCTAAAACTAAAGTGGAT+AGG | + | chr7_4:60036032-60036051 | None:intergenic | 30.0% |
| ! | GTTGTCATCTAAAACTAAAG+TGG | + | chr7_4:60036037-60036056 | None:intergenic | 30.0% |
| GGTATATTCTCTATGTCTTT+CGG | + | chr7_4:60036059-60036078 | None:intergenic | 30.0% | |
| ! | AAGAGTGATATGCACTTTTA+AGG | + | chr7_4:60036080-60036099 | None:intergenic | 30.0% |
| ACATCTCATTTCAAAGTGAA+TGG | - | chr7_4:60036118-60036137 | Msa1167540:intron | 30.0% | |
| ATGGACAATGATATCTGATT+TGG | - | chr7_4:60036137-60036156 | Msa1167540:intron | 30.0% | |
| CCACATAACACATAGTTTAA+AGG | + | chr7_4:60036262-60036281 | None:intergenic | 30.0% | |
| CCTTTAAACTATGTGTTATG+TGG | - | chr7_4:60036259-60036278 | Msa1167540:CDS | 30.0% | |
| ! | TTAGGTCTTTAAACTTTTCC+CGG | + | chr7_4:60036345-60036364 | None:intergenic | 30.0% |
| TTGTAAGAAACCTCAATAGT+TGG | + | chr7_4:60036369-60036388 | None:intergenic | 30.0% | |
| ! | TGACAAAAAATAGCTCTGTT+TGG | - | chr7_4:60036539-60036558 | Msa1167540:CDS | 30.0% |
| GTAGGAACAAGAAAAAATAG+AGG | + | chr7_4:60036761-60036780 | None:intergenic | 30.0% | |
| GATTCATCAACTAAACCCTA+CGG | + | chr7_4:60032207-60032226 | None:intergenic | 35.0% | |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | - | chr7_4:60032461-60032480 | Msa1167540:intron | 35.0% |
| GAATTTATTGCACCCTTGTT+TGG | - | chr7_4:60032620-60032639 | Msa1167540:intron | 35.0% | |
| AATGTAACTAGGTTCATGGA+TGG | + | chr7_4:60033088-60033107 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | + | chr7_4:60033092-60033111 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | - | chr7_4:60033092-60033111 | Msa1167540:intron | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | + | chr7_4:60033099-60033118 | None:intergenic | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | - | chr7_4:60033375-60033394 | Msa1167540:intron | 35.0% |
| ! | AAGTTTTACTGGTCAGTACT+TGG | - | chr7_4:60034011-60034030 | Msa1167540:intron | 35.0% |
| TTCAACTTTCCTACTAATCC+TGG | - | chr7_4:60034105-60034124 | Msa1167540:intron | 35.0% | |
| ! | TTGAAAGAACCAGGATTAGT+AGG | + | chr7_4:60034117-60034136 | None:intergenic | 35.0% |
| ATTCTGAACTTGAAAGAACC+AGG | + | chr7_4:60034126-60034145 | None:intergenic | 35.0% | |
| ! | TAGGTTGAAAAAAGTTGTGC+GGG | - | chr7_4:60034276-60034295 | Msa1167540:intron | 35.0% |
| TGTAATCCATTAGTTGGACT+TGG | + | chr7_4:60034398-60034417 | None:intergenic | 35.0% | |
| ! | TTGAATGCGTTTTCGAACTT+AGG | + | chr7_4:60034436-60034455 | None:intergenic | 35.0% |
| !! | CAGCATATTGACTTAGAAGT+TGG | + | chr7_4:60034485-60034504 | None:intergenic | 35.0% |
| ATTAAAAGCAAACCCTGCAT+TGG | - | chr7_4:60034529-60034548 | Msa1167540:intron | 35.0% | |
| TTAAAAGCAAACCCTGCATT+GGG | - | chr7_4:60034530-60034549 | Msa1167540:intron | 35.0% | |
| ATTAAAAGCAAACCCTGCAT+TGG | - | chr7_4:60034529-60034548 | Msa1167540:intron | 35.0% | |
| TTAAAAGCAAACCCTGCATT+GGG | - | chr7_4:60034530-60034549 | Msa1167540:intron | 35.0% | |
| !!! | GCTTTTGATAGTGATTCTGT+TGG | - | chr7_4:60034823-60034842 | Msa1167540:intron | 35.0% |
| ACTATGAGAAACTAGTGTGT+GGG | - | chr7_4:60034891-60034910 | Msa1167540:intron | 35.0% | |
| GACTTAAAAATGTCCCACAT+TGG | - | chr7_4:60034919-60034938 | Msa1167540:intron | 35.0% | |
| TGTAAATATCCGGAAGTTTC+TGG | + | chr7_4:60035135-60035154 | None:intergenic | 35.0% | |
| AAACAAAACGCGTTTGCTTA+AGG | - | chr7_4:60035161-60035180 | Msa1167540:intron | 35.0% | |
| TTACGAACTCTGCCTATAAA+AGG | - | chr7_4:60035222-60035241 | Msa1167540:intron | 35.0% | |
| !! | TTTTGGTGTGAAGAATGAGT+GGG | + | chr7_4:60035257-60035276 | None:intergenic | 35.0% |
| !! | ATTTTGGTGTGAAGAATGAG+TGG | + | chr7_4:60035258-60035277 | None:intergenic | 35.0% |
| ! | AAGCATCAACTGTGAGATTT+TGG | + | chr7_4:60035274-60035293 | None:intergenic | 35.0% |
| AACGATTGAACCATACTTTG+AGG | - | chr7_4:60035393-60035412 | Msa1167540:intron | 35.0% | |
| GAGAATTACACCTCAAAGTA+TGG | + | chr7_4:60035406-60035425 | None:intergenic | 35.0% | |
| ATATACTCGTAACAGTGATC+TGG | - | chr7_4:60035448-60035467 | Msa1167540:intron | 35.0% | |
| TATACTCGTAACAGTGATCT+GGG | - | chr7_4:60035449-60035468 | Msa1167540:intron | 35.0% | |
| GAACAGATTCTACTTGAAGT+TGG | - | chr7_4:60035609-60035628 | Msa1167540:three_prime_UTR | 35.0% | |
| GAGTTGAGTGTAAAGTAAAG+TGG | + | chr7_4:60035721-60035740 | None:intergenic | 35.0% | |
| TCTGACAGAAAGTGATTGAA+AGG | + | chr7_4:60035937-60035956 | None:intergenic | 35.0% | |
| ATAAGACTTGGAATCTCAAG+GGG | - | chr7_4:60035975-60035994 | Msa1167540:intron | 35.0% | |
| !! | CTAAAGTGGATAGGAGTATT+TGG | + | chr7_4:60036023-60036042 | None:intergenic | 35.0% |
| AAGACCTAAACCAACTATTG+AGG | - | chr7_4:60036356-60036375 | Msa1167540:intron | 35.0% | |
| ! | GAAACCTCAATAGTTGGTTT+AGG | + | chr7_4:60036363-60036382 | None:intergenic | 35.0% |
| ! | TATCCTTTTTGACCAAGGTT+TGG | + | chr7_4:60036452-60036471 | None:intergenic | 35.0% |
| CTTGGTCAAAAAGGATATGA+CGG | - | chr7_4:60036455-60036474 | Msa1167540:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | - | chr7_4:60036576-60036595 | Msa1167540:CDS | 35.0% | |
| AGATTGAAAACGTAGGAAAC+TGG | + | chr7_4:60036819-60036838 | None:intergenic | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | + | chr7_4:60037163-60037182 | None:intergenic | 35.0% | |
| ATTTGCCAAACATTGTAACC+AGG | + | chr7_4:60037338-60037357 | None:intergenic | 35.0% | |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | - | chr7_4:60032188-60032207 | Msa1167540:three_prime_UTR | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | - | chr7_4:60032189-60032208 | Msa1167540:three_prime_UTR | 40.0% |
| TAAACCCTACGGCAACAAAA+TGG | + | chr7_4:60032196-60032215 | None:intergenic | 40.0% | |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | + | chr7_4:60032667-60032686 | None:intergenic | 40.0% |
| TCAAAGATTTACCCAGGAAG+AGG | - | chr7_4:60032698-60032717 | Msa1167540:intron | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | - | chr7_4:60032699-60032718 | Msa1167540:intron | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | + | chr7_4:60032712-60032731 | None:intergenic | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | + | chr7_4:60032713-60032732 | None:intergenic | 40.0% | |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | + | chr7_4:60032928-60032947 | None:intergenic | 40.0% |
| ATATTATGCATCTGTCGTGC+AGG | - | chr7_4:60033195-60033214 | Msa1167540:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | + | chr7_4:60033281-60033300 | None:intergenic | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | + | chr7_4:60033377-60033396 | None:intergenic | 40.0% | |
| !! | CCTTTCTATTATGCTGACTC+TGG | - | chr7_4:60033374-60033393 | Msa1167540:intron | 40.0% |
| ATTTCACTGCAGGATTGACT+CGG | + | chr7_4:60033622-60033641 | None:intergenic | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | - | chr7_4:60033624-60033643 | Msa1167540:intron | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | - | chr7_4:60033645-60033664 | Msa1167540:intron | 40.0% | |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | + | chr7_4:60033665-60033684 | None:intergenic | 40.0% |
| ! | CATCTAAGGCACAAAAGTCA+GGG | - | chr7_4:60033698-60033717 | Msa1167540:intron | 40.0% |
| TTAACAAACACTCGGCATTG+GGG | + | chr7_4:60034254-60034273 | None:intergenic | 40.0% | |
| GTTAACAAACACTCGGCATT+GGG | + | chr7_4:60034255-60034274 | None:intergenic | 40.0% | |
| AGTTAACAAACACTCGGCAT+TGG | + | chr7_4:60034256-60034275 | None:intergenic | 40.0% | |
| ! | TGCCGAGTGTTTGTTAACTT+AGG | - | chr7_4:60034257-60034276 | Msa1167540:intron | 40.0% |
| ! | AACCACGTTGGATGTTTTCA+AGG | - | chr7_4:60034303-60034322 | Msa1167540:intron | 40.0% |
| TTCCTTGAAAACATCCAACG+TGG | + | chr7_4:60034308-60034327 | None:intergenic | 40.0% | |
| TTGTAAGTTACAACCTGGCA+TGG | - | chr7_4:60034357-60034376 | Msa1167540:intron | 40.0% | |
| AGAACATTGTTATCCATGCC+AGG | + | chr7_4:60034373-60034392 | None:intergenic | 40.0% | |
| TTCTTGCCAAGTCCAACTAA+TGG | - | chr7_4:60034389-60034408 | Msa1167540:intron | 40.0% | |
| TTCGAACTTAGGAGACAAGA+AGG | + | chr7_4:60034425-60034444 | None:intergenic | 40.0% | |
| TAAAAGCAAACCCTGCATTG+GGG | - | chr7_4:60034531-60034550 | Msa1167540:intron | 40.0% | |
| TAAAAGCAAACCCTGCATTG+GGG | - | chr7_4:60034531-60034550 | Msa1167540:intron | 40.0% | |
| TTAGAAGAGGAGGAACTACT+TGG | - | chr7_4:60034706-60034725 | Msa1167540:intron | 40.0% | |
| CACTATGAGAAACTAGTGTG+TGG | - | chr7_4:60034890-60034909 | Msa1167540:intron | 40.0% | |
| GTTCACCCGTTCACAAAAAT+GGG | + | chr7_4:60035013-60035032 | None:intergenic | 40.0% | |
| ! | ATATCCGGAAGTTTCTGGAT+CGG | + | chr7_4:60035130-60035149 | None:intergenic | 40.0% |
| AACAAAAAACCGCGTGACTT+GGG | + | chr7_4:60035204-60035223 | None:intergenic | 40.0% | |
| TAACAAAAAACCGCGTGACT+TGG | + | chr7_4:60035205-60035224 | None:intergenic | 40.0% | |
| ! | TTTGGTGTGAAGAATGAGTG+GGG | + | chr7_4:60035256-60035275 | None:intergenic | 40.0% |
| TAGTCTACCTTGCACAAACT+AGG | - | chr7_4:60035501-60035520 | Msa1167540:intron | 40.0% | |
| AGTCTACCTTGCACAAACTA+GGG | - | chr7_4:60035502-60035521 | Msa1167540:intron | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | + | chr7_4:60035533-60035552 | None:intergenic | 40.0% |
| ACTCACCCAGTAATTTCGTT+CGG | - | chr7_4:60035565-60035584 | Msa1167540:three_prime_UTR | 40.0% | |
| TAAGACTTGGAATCTCAAGG+GGG | - | chr7_4:60035976-60035995 | Msa1167540:intron | 40.0% | |
| !! | AAACTTTTCCCGGCTTTGAT+TGG | + | chr7_4:60036335-60036354 | None:intergenic | 40.0% |
| !! | GTTTTGTTGGAACCAAACCT+TGG | - | chr7_4:60036437-60036456 | Msa1167540:intron | 40.0% |
| GAACCAAACCTTGGTCAAAA+AGG | - | chr7_4:60036446-60036465 | Msa1167540:intron | 40.0% | |
| ! | CGTCATATCCTTTTTGACCA+AGG | + | chr7_4:60036457-60036476 | None:intergenic | 40.0% |
| AAATAGAGGAACTGGAACGT+AGG | + | chr7_4:60036779-60036798 | None:intergenic | 40.0% | |
| ACGTAGGAAACTGGAAAAGT+AGG | + | chr7_4:60036810-60036829 | None:intergenic | 40.0% | |
| AGGCAGAAGATTGAAAACGT+AGG | + | chr7_4:60036826-60036845 | None:intergenic | 40.0% | |
| ! | GTTGGTAAAGGTGAAGATGT+CGG | + | chr7_4:60037185-60037204 | None:intergenic | 40.0% |
| TAATGTTACCATCGTCGAGT+TGG | + | chr7_4:60037203-60037222 | None:intergenic | 40.0% | |
| CTGATCCTGGTTACAATGTT+TGG | - | chr7_4:60037330-60037349 | Msa1167540:intron | 40.0% | |
| ATGTTCCCTATTCCCTATCA+TGG | - | chr7_4:60037358-60037377 | Msa1167540:intron | 40.0% | |
| !! | ACTGAACTCTGTCGATTCAG+TGG | - | chr7_4:60032674-60032693 | Msa1167540:intron | 45.0% |
| AGTGGCTCAAAGATTTACCC+AGG | - | chr7_4:60032692-60032711 | Msa1167540:intron | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | - | chr7_4:60032936-60032955 | Msa1167540:intron | 45.0% | |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | + | chr7_4:60032966-60032985 | None:intergenic | 45.0% |
| GTACAGAAAGCAGCACAAGA+AGG | - | chr7_4:60032967-60032986 | Msa1167540:intron | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | - | chr7_4:60033224-60033243 | Msa1167540:intron | 45.0% | |
| AAAGAAAGCCAAGAAAGCCG+AGG | - | chr7_4:60033672-60033691 | Msa1167540:intron | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | + | chr7_4:60033692-60033711 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | - | chr7_4:60033697-60033716 | Msa1167540:intron | 45.0% |
| TAAGGCACAAAAGTCAGGGA+AGG | - | chr7_4:60033702-60033721 | Msa1167540:intron | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | - | chr7_4:60033703-60033722 | Msa1167540:intron | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | - | chr7_4:60033717-60033736 | Msa1167540:intron | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | - | chr7_4:60033718-60033737 | Msa1167540:intron | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | - | chr7_4:60033744-60033763 | Msa1167540:intron | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | - | chr7_4:60033745-60033764 | Msa1167540:intron | 45.0% | |
| GTCAGTACTTGGCACTTGTT+CGG | - | chr7_4:60034022-60034041 | Msa1167540:intron | 45.0% | |
| ATTCAGAGTTCCCCAATGCA+GGG | + | chr7_4:60034544-60034563 | None:intergenic | 45.0% | |
| AGGGAGAAGCCATTGGTATT+GGG | + | chr7_4:60034610-60034629 | None:intergenic | 45.0% | |
| TGTTATCCCTCAATCGCTGA+GGG | + | chr7_4:60034629-60034648 | None:intergenic | 45.0% | |
| TTGTTATCCCTCAATCGCTG+AGG | + | chr7_4:60034630-60034649 | None:intergenic | 45.0% | |
| AGGAACTACTTGGCCATACA+TGG | - | chr7_4:60034716-60034735 | Msa1167540:intron | 45.0% | |
| GGAACTACTTGGCCATACAT+GGG | - | chr7_4:60034717-60034736 | Msa1167540:intron | 45.0% | |
| CACAAAAATGGGTACCCCAA+GGG | + | chr7_4:60035002-60035021 | None:intergenic | 45.0% | |
| TCACAAAAATGGGTACCCCA+AGG | + | chr7_4:60035003-60035022 | None:intergenic | 45.0% | |
| !! | GGGGTACCCATTTTTGTGAA+CGG | - | chr7_4:60035004-60035023 | Msa1167540:intron | 45.0% |
| !! | GGGTACCCATTTTTGTGAAC+GGG | - | chr7_4:60035005-60035024 | Msa1167540:intron | 45.0% |
| CGTTCACCCGTTCACAAAAA+TGG | + | chr7_4:60035014-60035033 | None:intergenic | 45.0% | |
| ! | TATCCGGAAGTTTCTGGATC+GGG | + | chr7_4:60035129-60035148 | None:intergenic | 45.0% |
| ACAAAAAACCGCGTGACTTG+GGG | + | chr7_4:60035203-60035222 | None:intergenic | 45.0% | |
| TCTACTCCTTTCTGTCCCAT+CGG | - | chr7_4:60035326-60035345 | Msa1167540:intron | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | - | chr7_4:60035463-60035482 | Msa1167540:intron | 45.0% |
| ACGTCTTAAAGAAAGCGACC+TGG | - | chr7_4:60035537-60035556 | Msa1167540:three_prime_UTR | 45.0% | |
| CAAGAGATGCATCCCAACAA+AGG | - | chr7_4:60036207-60036226 | Msa1167540:CDS | 45.0% | |
| CTCTAAGTCGCACCTTTGTT+GGG | + | chr7_4:60036222-60036241 | None:intergenic | 45.0% | |
| TCTCTAAGTCGCACCTTTGT+TGG | + | chr7_4:60036223-60036242 | None:intergenic | 45.0% | |
| AAGGTGCGACTTAGAGAGAA+AGG | - | chr7_4:60036226-60036245 | Msa1167540:CDS | 45.0% | |
| CTAGCAGTTCCAATCAAAGC+CGG | - | chr7_4:60036323-60036342 | Msa1167540:intron | 45.0% | |
| TAGCAGTTCCAATCAAAGCC+GGG | - | chr7_4:60036324-60036343 | Msa1167540:intron | 45.0% | |
| AAGGATATGACGGCTCTGTT+TGG | - | chr7_4:60036465-60036484 | Msa1167540:intron | 45.0% | |
| !! | TACCATCGTCGAGTTGGTAA+AGG | + | chr7_4:60037197-60037216 | None:intergenic | 45.0% |
| AAGTGCCAAGCTAGGACTTT+AGG | + | chr7_4:60037307-60037326 | None:intergenic | 45.0% | |
| TTCCCTATTCCCTATCATGG+AGG | - | chr7_4:60037361-60037380 | Msa1167540:intron | 45.0% | |
| TGCCTCCATGATAGGGAATA+GGG | + | chr7_4:60037366-60037385 | None:intergenic | 45.0% | |
| TTACAGCTGCCTCCATGATA+GGG | + | chr7_4:60037373-60037392 | None:intergenic | 45.0% | |
| TTTACAGCTGCCTCCATGAT+AGG | + | chr7_4:60037374-60037393 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTAAAGTATAAAAA+TGG | - | chr7_4:60036862-60036881 | Msa1167540:intron | 5.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | + | chr7_4:60032944-60032963 | None:intergenic | 50.0% |
| GCAGGACATTGCTCAAGAAG+CGG | - | chr7_4:60033213-60033232 | Msa1167540:intron | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | + | chr7_4:60033252-60033271 | None:intergenic | 50.0% |
| CCAACAATGGACCTGGAGTA+TGG | + | chr7_4:60033268-60033287 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | - | chr7_4:60033265-60033284 | Msa1167540:intron | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | + | chr7_4:60033275-60033294 | None:intergenic | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | + | chr7_4:60033632-60033651 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | - | chr7_4:60033629-60033648 | Msa1167540:intron | 50.0% | |
| AGATGCTACCTCGGCTTTCT+TGG | + | chr7_4:60033683-60033702 | None:intergenic | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | - | chr7_4:60033684-60033703 | Msa1167540:intron | 50.0% | |
| GATTCAGAGTTCCCCAATGC+AGG | + | chr7_4:60034545-60034564 | None:intergenic | 50.0% | |
| TCCGAAGAGCCCAATACCAA+TGG | - | chr7_4:60034598-60034617 | Msa1167540:intron | 50.0% | |
| ! | GCCATTGGTATTGGGCTCTT+CGG | + | chr7_4:60034602-60034621 | None:intergenic | 50.0% |
| GAGGGAGAAGCCATTGGTAT+TGG | + | chr7_4:60034611-60034630 | None:intergenic | 50.0% | |
| TTGGGGTGACTCTCCAATGT+GGG | + | chr7_4:60034935-60034954 | None:intergenic | 50.0% | |
| TATATATCACGCGCGACGAC+CGG | - | chr7_4:60035045-60035064 | Msa1167540:intron | 50.0% | |
| GACTTAATCCCCAAGTCACG+CGG | - | chr7_4:60035192-60035211 | Msa1167540:intron | 50.0% | |
| TCGAAACCGATGGGACAGAA+AGG | + | chr7_4:60035335-60035354 | None:intergenic | 50.0% | |
| CCGCTCTATTCGAAACCGAT+GGG | + | chr7_4:60035344-60035363 | None:intergenic | 50.0% | |
| !! | CCCATCGGTTTCGAATAGAG+CGG | - | chr7_4:60035341-60035360 | Msa1167540:intron | 50.0% |
| ACCGCTCTATTCGAAACCGA+TGG | + | chr7_4:60035345-60035364 | None:intergenic | 50.0% | |
| TCGATCGAAGCCACTCGATA+CGG | + | chr7_4:60035374-60035393 | None:intergenic | 50.0% | |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | - | chr7_4:60035469-60035488 | Msa1167540:intron | 50.0% |
| ! | GCACTACCCTAGTTTGTGCA+AGG | + | chr7_4:60035511-60035530 | None:intergenic | 50.0% |
| !! | GTGAAGATGTCGGCTCTGTT+TGG | + | chr7_4:60037175-60037194 | None:intergenic | 50.0% |
| CACCTTTACCAACTCGACGA+TGG | - | chr7_4:60037192-60037211 | Msa1167540:intron | 50.0% | |
| TGTGGCCTAAAGTCCTAGCT+TGG | - | chr7_4:60037299-60037318 | Msa1167540:intron | 50.0% | |
| ATCAGCGTAAGTGCCAAGCT+AGG | + | chr7_4:60037315-60037334 | None:intergenic | 50.0% | |
| CTGCCTCCATGATAGGGAAT+AGG | + | chr7_4:60037367-60037386 | None:intergenic | 50.0% | |
| TGGCTGCTTCGTTGATGTGG+TGG | + | chr7_4:60032090-60032109 | None:intergenic | 55.0% | |
| CCATGGCTGCTTCGTTGATG+TGG | + | chr7_4:60032093-60032112 | None:intergenic | 55.0% | |
| CCACATCAACGAAGCAGCCA+TGG | - | chr7_4:60032090-60032109 | Msa1167540:three_prime_UTR | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | + | chr7_4:60033257-60033276 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | - | chr7_4:60033254-60033273 | Msa1167540:intron | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | + | chr7_4:60033260-60033279 | None:intergenic | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | - | chr7_4:60033312-60033331 | Msa1167540:intron | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | + | chr7_4:60033323-60033342 | None:intergenic | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | + | chr7_4:60033331-60033350 | None:intergenic | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | + | chr7_4:60033332-60033351 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | - | chr7_4:60033330-60033349 | Msa1167540:intron | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | - | chr7_4:60033344-60033363 | Msa1167540:intron | 55.0% | |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | - | chr7_4:60033732-60033751 | Msa1167540:intron | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | - | chr7_4:60033733-60033752 | Msa1167540:intron | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | + | chr7_4:60033751-60033770 | None:intergenic | 55.0% |
| CCCAAGGGTCCTAAAATGGG+CGG | - | chr7_4:60033748-60033767 | Msa1167540:intron | 55.0% | |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | + | chr7_4:60033752-60033771 | None:intergenic | 55.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | - | chr7_4:60033751-60033770 | Msa1167540:intron | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | - | chr7_4:60033758-60033777 | Msa1167540:intron | 55.0% |
| TGTGCGGGAGTTAACCACGT+TGG | - | chr7_4:60034291-60034310 | Msa1167540:intron | 55.0% | |
| CTTCGGAGTTCCCCAATGCA+GGG | + | chr7_4:60034585-60034604 | None:intergenic | 55.0% | |
| TCTTCGGAGTTCCCCAATGC+AGG | + | chr7_4:60034586-60034605 | None:intergenic | 55.0% | |
| ATCGCTGAGGGAGAAGCCAT+TGG | + | chr7_4:60034617-60034636 | None:intergenic | 55.0% | |
| GCTTCTCCCTCAGCGATTGA+GGG | - | chr7_4:60034620-60034639 | Msa1167540:intron | 55.0% | |
| GTTGGGGTGACTCTCCAATG+TGG | + | chr7_4:60034936-60034955 | None:intergenic | 55.0% | |
| ! | CGGAAGTTTCTGGATCGGGT+CGG | + | chr7_4:60035125-60035144 | None:intergenic | 55.0% |
| CGACCCGATCCAGAAACTTC+CGG | - | chr7_4:60035123-60035142 | Msa1167540:intron | 55.0% | |
| ! | GGGGCGAGCTCTCCTTTTAT+AGG | + | chr7_4:60035237-60035256 | None:intergenic | 55.0% |
| CGGTTACGTACCGTATCGAG+TGG | - | chr7_4:60035361-60035380 | Msa1167540:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | - | chr7_4:60035474-60035493 | Msa1167540:intron | 55.0% |
| TTACTGGGTGAGTCACGACC+AGG | + | chr7_4:60035558-60035577 | None:intergenic | 55.0% | |
| CTTGGCACTTACGCTGATCC+TGG | - | chr7_4:60037317-60037336 | Msa1167540:intron | 55.0% | |
| CCGAGGTTCGAGATGCTGCT+AGG | - | chr7_4:60033329-60033348 | Msa1167540:intron | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | - | chr7_4:60033754-60033773 | Msa1167540:intron | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | + | chr7_4:60033760-60033779 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | - | chr7_4:60033757-60033776 | Msa1167540:intron | 60.0% |
| GGCTTCTCCCTCAGCGATTG+AGG | - | chr7_4:60034619-60034638 | Msa1167540:intron | 60.0% | |
| TAAGGGTGGGGTGACCTCCA+AGG | - | chr7_4:60034971-60034990 | Msa1167540:intron | 60.0% | |
| AAGGGTGGGGTGACCTCCAA+GGG | - | chr7_4:60034972-60034991 | Msa1167540:intron | 60.0% | |
| ! | ACCTCCAAGGGTGTGCCCTT+GGG | - | chr7_4:60034984-60035003 | Msa1167540:intron | 60.0% |
| CTATCAACCACGCCGTCTCC+AGG | + | chr7_4:60035484-60035503 | None:intergenic | 60.0% | |
| ! | GACCTCCAAGGGTGTGCCCT+TGG | - | chr7_4:60034983-60035002 | Msa1167540:intron | 65.0% |
| ! | CCTCCAAGGGTGTGCCCTTG+GGG | - | chr7_4:60034985-60035004 | Msa1167540:intron | 65.0% |
| ! | GTACCCCAAGGGCACACCCT+TGG | + | chr7_4:60034991-60035010 | None:intergenic | 65.0% |
| ! | CCCCAAGGGCACACCCTTGG+AGG | + | chr7_4:60034988-60035007 | None:intergenic | 70.0% |
| TATCACGCGCGACGACCGGC+CGG | - | chr7_4:60035049-60035068 | Msa1167540:intron | 70.0% | |
| ATCACGCGCGACGACCGGCC+GGG | - | chr7_4:60035050-60035069 | Msa1167540:intron | 75.0% | |
| CCCACGCCCAAGCCCAAGCC+CGG | + | chr7_4:60035076-60035095 | None:intergenic | 75.0% | |
| CCGGGCTTGGGCTTGGGCGT+GGG | - | chr7_4:60035073-60035092 | Msa1167540:intron | 75.0% | |
| ! | AAGCCCAAGCCCGGCCCGGC+CGG | + | chr7_4:60035067-60035086 | None:intergenic | 80.0% |
| ! | GCCGGGCCGGGCTTGGGCTT+GGG | - | chr7_4:60035067-60035086 | Msa1167540:intron | 80.0% |
| ! | GCCCAAGCCCAAGCCCGGCC+CGG | + | chr7_4:60035071-60035090 | None:intergenic | 80.0% |
| ! | GCCGGGCTTGGGCTTGGGCG+TGG | - | chr7_4:60035072-60035091 | Msa1167540:intron | 80.0% |
| ! | ACGACCGGCCGGGCCGGGCT+TGG | - | chr7_4:60035060-60035079 | Msa1167540:intron | 85.0% |
| ! | CGACCGGCCGGGCCGGGCTT+GGG | - | chr7_4:60035061-60035080 | Msa1167540:intron | 85.0% |
| ! | GGCCGGGCCGGGCTTGGGCT+TGG | - | chr7_4:60035066-60035085 | Msa1167540:intron | 85.0% |
| ! | CGCGCGACGACCGGCCGGGC+CGG | - | chr7_4:60035054-60035073 | Msa1167540:intron | 90.0% |
| ! | GCGCGACGACCGGCCGGGCC+GGG | - | chr7_4:60035055-60035074 | Msa1167540:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 60032039 | 60037469 | 60032039 | ID=Msa1167540;Name=Msa1167540 |
| chr7_4 | mRNA | 60032039 | 60037469 | 60032039 | ID=Msa1167540-mRNA-1;Parent=Msa1167540;Name=Msa1167540-mRNA-1;_AED=0.31;_eAED=0.31;_QI=70|1|1|1|0.8|0.66|6|391|163 |
| chr7_4 | exon | 60032039 | 60032231 | 60032039 | ID=Msa1167540-mRNA-1:exon:18716;Parent=Msa1167540-mRNA-1 |
| chr7_4 | exon | 60035521 | 60035872 | 60035521 | ID=Msa1167540-mRNA-1:exon:18715;Parent=Msa1167540-mRNA-1 |
| chr7_4 | exon | 60036143 | 60036291 | 60036143 | ID=Msa1167540-mRNA-1:exon:18714;Parent=Msa1167540-mRNA-1 |
| chr7_4 | exon | 60036520 | 60036621 | 60036520 | ID=Msa1167540-mRNA-1:exon:18713;Parent=Msa1167540-mRNA-1 |
| chr7_4 | exon | 60036760 | 60036835 | 60036760 | ID=Msa1167540-mRNA-1:exon:18712;Parent=Msa1167540-mRNA-1 |
| chr7_4 | exon | 60037389 | 60037469 | 60037389 | ID=Msa1167540-mRNA-1:exon:18711;Parent=Msa1167540-mRNA-1 |
| chr7_4 | five_prime_UTR | 60037400 | 60037469 | 60037400 | ID=Msa1167540-mRNA-1:five_prime_utr;Parent=Msa1167540-mRNA-1 |
| chr7_4 | CDS | 60037389 | 60037399 | 60037389 | ID=Msa1167540-mRNA-1:cds;Parent=Msa1167540-mRNA-1 |
| chr7_4 | CDS | 60036760 | 60036835 | 60036760 | ID=Msa1167540-mRNA-1:cds;Parent=Msa1167540-mRNA-1 |
| chr7_4 | CDS | 60036520 | 60036621 | 60036520 | ID=Msa1167540-mRNA-1:cds;Parent=Msa1167540-mRNA-1 |
| chr7_4 | CDS | 60036143 | 60036291 | 60036143 | ID=Msa1167540-mRNA-1:cds;Parent=Msa1167540-mRNA-1 |
| chr7_4 | CDS | 60035719 | 60035872 | 60035719 | ID=Msa1167540-mRNA-1:cds;Parent=Msa1167540-mRNA-1 |
| chr7_4 | three_prime_UTR | 60035521 | 60035718 | 60035521 | ID=Msa1167540-mRNA-1:three_prime_utr;Parent=Msa1167540-mRNA-1 |
| chr7_4 | three_prime_UTR | 60032039 | 60032231 | 60032039 | ID=Msa1167540-mRNA-1:three_prime_utr;Parent=Msa1167540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
