Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012170 | XP_013466553.1 | 93.758 | 753 | 8 | 2 | 1 | 734 | 1 | 733 | 0.0 | 1417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012170 | sp|Q9ZU97|VAC14_ARATH | 72.201 | 777 | 139 | 8 | 1 | 734 | 1 | 743 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012170 | Msa0105060 | 0.819922 | 9.006436e-53 | -8.615850e-47 |
| Msa0012170 | Msa0152240 | 0.870140 | 1.827248e-66 | -8.615850e-47 |
| Msa0012170 | Msa0372590 | 0.802191 | 6.307231e-49 | -8.615850e-47 |
| Msa0012170 | Msa0450630 | 0.812717 | 3.684413e-51 | -8.615850e-47 |
| Msa0012170 | Msa1101660 | 0.807690 | 4.469623e-50 | -8.615850e-47 |
| Msa0012170 | Msa1253510 | 0.816669 | 4.907663e-52 | -8.615850e-47 |
| Msa0012170 | Msa1295990 | 0.809691 | 1.669814e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012170 | MtrunA17_Chr1g0161241 | 93.758 | 753 | 8 | 2 | 1 | 734 | 1 | 733 | 0.0 | 1417 |
| Msa0012170 | MtrunA17_Chr8g0391721 | 79.200 | 750 | 108 | 4 | 1 | 729 | 1 | 723 | 0.0 | 1164 |
| Msa0012170 | MtrunA17_Chr1g0161971 | 95.763 | 118 | 5 | 0 | 257 | 374 | 1 | 118 | 7.80e-72 | 229 |
| Msa0012170 | MtrunA17_Chr1g0161961 | 91.803 | 61 | 5 | 0 | 374 | 434 | 34 | 94 | 1.27e-30 | 117 |
| Msa0012170 | MtrunA17_Chr1g0161961 | 97.143 | 35 | 1 | 0 | 595 | 629 | 97 | 131 | 7.68e-16 | 75.1 |
| Msa0012170 | MtrunA17_Chr1g0161981 | 95.000 | 40 | 2 | 0 | 184 | 223 | 24 | 63 | 1.81e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012170 | AT2G01690.1 | 72.201 | 777 | 139 | 8 | 1 | 734 | 1 | 743 | 0.0 | 1083 |
| Msa0012170 | AT2G01690.2 | 72.108 | 778 | 139 | 9 | 1 | 734 | 1 | 744 | 0.0 | 1078 |
Find 172 sgRNAs with CRISPR-Local
Find 653 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAAAGTTTCTTATAATTT+AGG | 0.091731 | 1_1:-18275464 | Msa0012170:three_prime_UTR |
| TCGATCCTGCAAGATATTTA+TGG | 0.136387 | 1_1:-18276804 | Msa0012170:CDS |
| AAGATAATTAATAATAATTA+AGG | 0.196193 | 1_1:+18285558 | None:intergenic |
| CAATACGATGTCTGTTTAAC+AGG | 0.212869 | 1_1:+18280314 | None:intergenic |
| CCATACTATGCTGACATTCT+TGG | 0.222445 | 1_1:-18280872 | Msa0012170:CDS |
| CAGACTAGATAATTCTCTTT+TGG | 0.230548 | 1_1:-18279134 | Msa0012170:CDS |
| GTGAAATTGTAGTTGAAATT+TGG | 0.233119 | 1_1:+18285499 | None:intergenic |
| GTAAAGTTTCTTATAATTTA+GGG | 0.236641 | 1_1:-18275463 | Msa0012170:three_prime_UTR |
| GGATAAATTGATTCGCTTGC+TGG | 0.254134 | 1_1:-18277060 | Msa0012170:CDS |
| TGAAAATCAGATCTAGAAAT+TGG | 0.260872 | 1_1:+18285450 | None:intergenic |
| GGATGGTGAATATTGGGTTT+TGG | 0.274248 | 1_1:-18275608 | Msa0012170:three_prime_UTR |
| AGGTTGGGATGGTGAATATT+GGG | 0.285559 | 1_1:-18275614 | Msa0012170:three_prime_UTR |
| TGGTCGAATGGCTGAAATTC+TGG | 0.300744 | 1_1:-18281132 | Msa0012170:CDS |
| TCAAGATCAAGGAGAAATTC+AGG | 0.304942 | 1_1:-18275767 | Msa0012170:CDS |
| ATAGTACACTCGATATAAAA+TGG | 0.308678 | 1_1:+18275380 | None:intergenic |
| CTTTGCTTATCTTAGATTGC+AGG | 0.327847 | 1_1:-18277027 | Msa0012170:intron |
| TTAGCATTATTTCTATCTTT+CGG | 0.329947 | 1_1:+18275415 | None:intergenic |
| GAGGTTGGGATGGTGAATAT+TGG | 0.341096 | 1_1:-18275615 | Msa0012170:three_prime_UTR |
| CAAGAGATCCTCAGCACTTC+CGG | 0.342233 | 1_1:-18279186 | Msa0012170:CDS |
| GATTGCTCGTAGCTCTTCAT+TGG | 0.342489 | 1_1:+18280643 | None:intergenic |
| ATCAGATATGCAAGGCAAAA+TGG | 0.345788 | 1_1:+18280847 | None:intergenic |
| ATTAGAAGGAGAATCTGATT+TGG | 0.355199 | 1_1:-18278937 | Msa0012170:CDS |
| GGGTGTCAAATATGTCATTT+AGG | 0.356610 | 1_1:+18279882 | None:intergenic |
| AACTGAATAGAGAGCCTTCT+GGG | 0.361056 | 1_1:-18276432 | Msa0012170:CDS |
| TGCGGATTTCGTTTCGAGAA+TGG | 0.362332 | 1_1:+18285380 | None:intergenic |
| CAGGCATCTGAGGAAGAAAT+TGG | 0.364245 | 1_1:+18276401 | None:intergenic |
| GGCTTATTTGTAAGGTTGCT+CGG | 0.366594 | 1_1:-18280670 | Msa0012170:intron |
| AAACCCAGCATATCAATATC+TGG | 0.373803 | 1_1:+18281685 | None:intergenic |
| AATAGCCATAAATATCTTGC+AGG | 0.379710 | 1_1:+18276799 | None:intergenic |
| TCAGATCTAGAAATTGGAAT+TGG | 0.380790 | 1_1:+18285456 | None:intergenic |
| CCAAGAATGTCAGCATAGTA+TGG | 0.383598 | 1_1:+18280872 | None:intergenic |
| TGAAATCCTTGTGGGCTAGA+TGG | 0.384041 | 1_1:-18275499 | Msa0012170:three_prime_UTR |
| GAACTTTCTACAATATTAGA+AGG | 0.384394 | 1_1:-18278951 | Msa0012170:CDS |
| GGTAGGATGGATTACTGTAT+TGG | 0.385066 | 1_1:-18281716 | Msa0012170:CDS |
| CACTCACCATCAAGAAAATC+AGG | 0.388028 | 1_1:+18281658 | None:intergenic |
| AATAACGAACTCTGCTATCT+TGG | 0.393017 | 1_1:+18282358 | None:intergenic |
| TTGGAATCAAGATGAAGCTT+GGG | 0.401994 | 1_1:-18275589 | Msa0012170:three_prime_UTR |
| TTCATGCGCTCCCTCAATAA+TGG | 0.402107 | 1_1:+18281769 | None:intergenic |
| CAACTGAATAGAGAGCCTTC+TGG | 0.404102 | 1_1:-18276433 | Msa0012170:CDS |
| CTCTTGAAGTCTGTAGATTA+TGG | 0.410233 | 1_1:-18281152 | Msa0012170:CDS |
| ATATTTCTTTGTATGCCTCT+TGG | 0.412645 | 1_1:-18277394 | Msa0012170:CDS |
| AGAGCATCCGCCATTGAAAC+AGG | 0.413598 | 1_1:+18285258 | None:intergenic |
| TGGCTATTCAAAGCATTGTA+TGG | 0.417465 | 1_1:-18276784 | Msa0012170:CDS |
| AAAGCTTATCGGCGAGGTTA+CGG | 0.418298 | 1_1:+18285211 | None:intergenic |
| TGTTCCAGATATTGATATGC+TGG | 0.422720 | 1_1:-18281689 | Msa0012170:CDS |
| CAACTACAATTTCACACAAA+CGG | 0.424202 | 1_1:-18285491 | Msa0012170:five_prime_UTR |
| CTGATTTCAACCTGTTTCAA+TGG | 0.424226 | 1_1:-18285268 | Msa0012170:exon |
| TGACCGAAAGTGATCAGTTC+AGG | 0.428919 | 1_1:-18281943 | Msa0012170:intron |
| CGCAATGTTTCGTTTCGAGC+AGG | 0.430884 | 1_1:-18285361 | Msa0012170:five_prime_UTR |
| GAATTTCTCCTTGATCTTGA+AGG | 0.431307 | 1_1:+18275770 | None:intergenic |
| AACTTTGAATGGGGTCGGTC+GGG | 0.432159 | 1_1:-18275683 | Msa0012170:three_prime_UTR |
| AAGTCTCTGCTTTGTAGCTC+AGG | 0.434052 | 1_1:-18277348 | Msa0012170:intron |
| AAGAATTTATACCATTATTG+AGG | 0.438037 | 1_1:-18281780 | Msa0012170:CDS |
| GTTAACCTAGTAAATTCATC+TGG | 0.441009 | 1_1:+18281092 | None:intergenic |
| CTAATATTGTAGAAAGTTCA+CGG | 0.449070 | 1_1:+18278955 | None:intergenic |
| GCACCTGAACTGATCACTTT+CGG | 0.449959 | 1_1:+18281940 | None:intergenic |
| AGTTTAGCTGCTGCTACCGT+TGG | 0.459371 | 1_1:-18284663 | Msa0012170:CDS |
| CAGTGCATATGAACTTTGAA+TGG | 0.464908 | 1_1:-18275694 | Msa0012170:three_prime_UTR |
| AGAATTTATACCATTATTGA+GGG | 0.465007 | 1_1:-18281779 | Msa0012170:CDS |
| GTTCTCCAGATGAATTTACT+AGG | 0.466712 | 1_1:-18281097 | Msa0012170:CDS |
| AATGAGTTTGTCAAACTTGG+TGG | 0.474926 | 1_1:-18280908 | Msa0012170:CDS |
| AGTGCATATGAACTTTGAAT+GGG | 0.474984 | 1_1:-18275693 | Msa0012170:three_prime_UTR |
| TAATGTTGTTTCTATCTATG+TGG | 0.475469 | 1_1:-18275725 | Msa0012170:three_prime_UTR |
| TCTTCTGATGTTGCTACCTC+AGG | 0.477620 | 1_1:-18276761 | Msa0012170:intron |
| GTTTAGCTGCTGCTACCGTT+GGG | 0.481182 | 1_1:-18284662 | Msa0012170:CDS |
| GAAAATGCAGCAGCAACATC+GGG | 0.482689 | 1_1:-18276290 | Msa0012170:CDS |
| AAACTGAGGCTAGCAACCTT+TGG | 0.482938 | 1_1:+18276220 | None:intergenic |
| AATCTAAGATAAGCAAAGAT+TGG | 0.483573 | 1_1:+18277032 | None:intergenic |
| TGCATAAGGCATCAAAGATC+TGG | 0.484889 | 1_1:+18282187 | None:intergenic |
| AAGTGCTGTGATTCAATCTC+TGG | 0.486778 | 1_1:-18277120 | Msa0012170:CDS |
| CAGAGACTTATAATTGCCAT+TGG | 0.488893 | 1_1:+18277362 | None:intergenic |
| AGCGAATCAATTTATCCAGT+TGG | 0.488979 | 1_1:+18277066 | None:intergenic |
| ATAAATGAGTTTGTCAAACT+TGG | 0.493378 | 1_1:-18280911 | Msa0012170:CDS |
| TTTCTATCTTTCGGAGGCAT+AGG | 0.494223 | 1_1:+18275424 | None:intergenic |
| TTTCTTCCTCAGATGCCTGA+TGG | 0.494336 | 1_1:-18276397 | Msa0012170:CDS |
| GTGAAGCAGCTTGCTTCTGC+CGG | 0.494568 | 1_1:-18285065 | Msa0012170:CDS |
| GCTTATTTGTAAGGTTGCTC+GGG | 0.495026 | 1_1:-18280669 | Msa0012170:intron |
| GAAATCCTTGTGGGCTAGAT+GGG | 0.501775 | 1_1:-18275498 | Msa0012170:three_prime_UTR |
| ATCTGCAGAAAGCTTGCATA+AGG | 0.501879 | 1_1:+18282173 | None:intergenic |
| TTTCTGAGAAACTGTTGAGC+TGG | 0.508109 | 1_1:+18285603 | None:intergenic |
| TTAGGCAACTCTCTAGTGAA+TGG | 0.509895 | 1_1:-18280375 | Msa0012170:intron |
| ATCAAAAGCTTCAGCTGGAT+CGG | 0.510148 | 1_1:+18280616 | None:intergenic |
| CTCGAATCGAAGCTTTGCAT+TGG | 0.511173 | 1_1:-18280345 | Msa0012170:CDS |
| TTTGGAATCAAGATGAAGCT+TGG | 0.512873 | 1_1:-18275590 | Msa0012170:three_prime_UTR |
| CAATCACTGGTAAATCCTGC+CGG | 0.515153 | 1_1:-18277428 | Msa0012170:CDS |
| ATGTCCCTCCTTCAAGATCA+AGG | 0.516089 | 1_1:-18275778 | Msa0012170:CDS |
| TGTTGTGGAATTAGGTTGAG+GGG | 0.516711 | 1_1:-18285091 | Msa0012170:intron |
| AGGTTACGGAGCACGGCGGC+CGG | 0.518733 | 1_1:+18285225 | None:intergenic |
| GAACTTTGAATGGGGTCGGT+CGG | 0.519465 | 1_1:-18275684 | Msa0012170:three_prime_UTR |
| AGAAATATACAAATCCTTCC+CGG | 0.521247 | 1_1:+18277409 | None:intergenic |
| GTTCCAGATATTGATATGCT+GGG | 0.521529 | 1_1:-18281688 | Msa0012170:CDS |
| CTAGTCTGAAATTGTGCACA+AGG | 0.521586 | 1_1:+18279149 | None:intergenic |
| CTATCTTTCGGAGGCATAGG+AGG | 0.522475 | 1_1:+18275427 | None:intergenic |
| GAAATTCTGGTACAGAGGGC+TGG | 0.529861 | 1_1:-18281119 | Msa0012170:CDS |
| CCTACATCAAAAGCTTCAGC+TGG | 0.531054 | 1_1:+18280611 | None:intergenic |
| TAGGCAACTCTCTAGTGAAT+GGG | 0.531096 | 1_1:-18280374 | Msa0012170:CDS |
| CTTATCCACTTCATTACCAA+AGG | 0.535015 | 1_1:-18276236 | Msa0012170:CDS |
| TTTGTCCACTACATTATCAA+AGG | 0.535218 | 1_1:-18276200 | Msa0012170:intron |
| CAAGATCAAGGAGAAATTCA+GGG | 0.537258 | 1_1:-18275766 | Msa0012170:CDS |
| ATCGGCGAGGTTACGGAGCA+CGG | 0.537982 | 1_1:+18285218 | None:intergenic |
| GGTTAAATTACCTCATCAGA+TGG | 0.539464 | 1_1:+18279839 | None:intergenic |
| GATTCAATCTCTGGAGGAGG+AGG | 0.539665 | 1_1:-18277111 | Msa0012170:CDS |
| TTCTCCTTGATCTTGAAGGA+GGG | 0.541578 | 1_1:+18275774 | None:intergenic |
| TTGTTGTGGAATTAGGTTGA+GGG | 0.541578 | 1_1:-18285092 | Msa0012170:intron |
| TTTCTCCTTGATCTTGAAGG+AGG | 0.541709 | 1_1:+18275773 | None:intergenic |
| GGCTGAAATTCTGGTACAGA+GGG | 0.547336 | 1_1:-18281123 | Msa0012170:CDS |
| TTTATTTATAGAGGTTGGGA+TGG | 0.549584 | 1_1:-18275625 | Msa0012170:three_prime_UTR |
| TTTGTTCCATCAGGCATCTG+AGG | 0.550164 | 1_1:+18276391 | None:intergenic |
| CTCTTGGTGTCATTCTCCAA+TGG | 0.560351 | 1_1:-18277378 | Msa0012170:CDS |
| CTAGGTTAACAGCTATCACA+TGG | 0.560734 | 1_1:-18281079 | Msa0012170:CDS |
| ATATACAAATCCTTCCCGGC+AGG | 0.561385 | 1_1:+18277413 | None:intergenic |
| AGAAAATGCAGCAGCAACAT+CGG | 0.563908 | 1_1:-18276291 | Msa0012170:CDS |
| GATGGTGATGCAACTGAAGA+TGG | 0.565704 | 1_1:-18276364 | Msa0012170:CDS |
| TAAAGAAGAGAAAATTAGAG+TGG | 0.570631 | 1_1:-18280825 | Msa0012170:intron |
| GTTAAACAGACATCGTATTG+AGG | 0.572840 | 1_1:-18280311 | Msa0012170:intron |
| AAGTTCACGGTAGACTCTCT+CGG | 0.573576 | 1_1:+18278968 | None:intergenic |
| AGCAACCTTTGGTAATGAAG+TGG | 0.573593 | 1_1:+18276231 | None:intergenic |
| ACGAACTCTGCTATCTTGGT+CGG | 0.573813 | 1_1:+18282362 | None:intergenic |
| CAAGGAAAACGACAAGATGC+CGG | 0.577859 | 1_1:+18279167 | None:intergenic |
| ATTTCAACCTGTTTCAATGG+CGG | 0.580914 | 1_1:-18285265 | Msa0012170:exon |
| GATGCCTGATGGAACAAAAG+AGG | 0.583988 | 1_1:-18276386 | Msa0012170:CDS |
| TGTGATTCAATCTCTGGAGG+AGG | 0.585756 | 1_1:-18277114 | Msa0012170:CDS |
| ACTGGTAAATCCTGCCGGGA+AGG | 0.587571 | 1_1:-18277423 | Msa0012170:CDS |
| TGGAATCAAGATGAAGCTTG+GGG | 0.588271 | 1_1:-18275588 | Msa0012170:three_prime_UTR |
| GAGCATCACGTTCTTCTACA+AGG | 0.590591 | 1_1:+18275543 | None:intergenic |
| AATCACTGGTAAATCCTGCC+GGG | 0.591032 | 1_1:-18277427 | Msa0012170:CDS |
| AAAACTACACCTCCTTGCAA+TGG | 0.592191 | 1_1:+18280577 | None:intergenic |
| TGGCTGAAATTCTGGTACAG+AGG | 0.592454 | 1_1:-18281124 | Msa0012170:CDS |
| GTCTGTAGATTATGGTCGAA+TGG | 0.594824 | 1_1:-18281144 | Msa0012170:CDS |
| AGTAATCTTATCATGATCAC+CGG | 0.599661 | 1_1:+18285046 | None:intergenic |
| GGATGCTCTCACTGTCATGC+CGG | 0.600572 | 1_1:-18285244 | Msa0012170:CDS |
| ATATGAACTTTGAATGGGGT+CGG | 0.602899 | 1_1:-18275688 | Msa0012170:three_prime_UTR |
| GATCTGAAAGTGCTTTGAGT+AGG | 0.604366 | 1_1:+18279861 | None:intergenic |
| TGCTGTGATTCAATCTCTGG+AGG | 0.606142 | 1_1:-18277117 | Msa0012170:CDS |
| ATGTGCAGCACTTTGTACAT+TGG | 0.607908 | 1_1:+18282143 | None:intergenic |
| TATGCAGGAGGCACAACAAG+AGG | 0.609276 | 1_1:-18275834 | Msa0012170:intron |
| TCTTCTTTATCAGATATGCA+AGG | 0.610375 | 1_1:+18280839 | None:intergenic |
| CAGCATAGTATGGAACAAGC+TGG | 0.612362 | 1_1:+18280882 | None:intergenic |
| ATCTGAAAGTGCTTTGAGTA+GGG | 0.613711 | 1_1:+18279862 | None:intergenic |
| AGCACTATATAACATTGCTA+AGG | 0.614582 | 1_1:-18282325 | Msa0012170:intron |
| GCATTATTTCTATCTTTCGG+AGG | 0.615467 | 1_1:+18275418 | None:intergenic |
| GAGCAATCCTCTCCATTGCA+AGG | 0.617500 | 1_1:-18280589 | Msa0012170:CDS |
| TCTCTTAGATCGACTCGTGA+AGG | 0.618562 | 1_1:-18282121 | Msa0012170:intron |
| AATATCCCATCTAGCCCACA+AGG | 0.627127 | 1_1:+18275493 | None:intergenic |
| AGCAACCTTTGATAATGTAG+TGG | 0.629292 | 1_1:+18276195 | None:intergenic |
| AATTGGTAATAATCCCCAGA+AGG | 0.629567 | 1_1:+18276418 | None:intergenic |
| TACACCTCCTTGCAATGGAG+AGG | 0.635366 | 1_1:+18280582 | None:intergenic |
| ACAAGATGCCGGAAGTGCTG+AGG | 0.637595 | 1_1:+18279178 | None:intergenic |
| ACTTTCAGATCCATCTGATG+AGG | 0.638140 | 1_1:-18279849 | Msa0012170:intron |
| AATACGATGTCTGTTTAACA+GGG | 0.645216 | 1_1:+18280315 | None:intergenic |
| AGAAGAACGTGATGCTCACG+TGG | 0.646393 | 1_1:-18275537 | Msa0012170:three_prime_UTR |
| GCAACTCTCTAGTGAATGGG+AGG | 0.647513 | 1_1:-18280371 | Msa0012170:CDS |
| TGAAGCTGCTCAGCATCTCG+AGG | 0.650953 | 1_1:-18284631 | Msa0012170:intron |
| CTGCTCGAAACGAAACATTG+CGG | 0.651177 | 1_1:+18285362 | None:intergenic |
| GAATCACAGCACTTGCATGT+CGG | 0.655650 | 1_1:+18277129 | None:intergenic |
| ATAATGTAGTGGACAAACTG+AGG | 0.657167 | 1_1:+18276206 | None:intergenic |
| GTGATGCAACTGAAGATGGT+GGG | 0.660086 | 1_1:-18276360 | Msa0012170:CDS |
| GGTGATGCAACTGAAGATGG+TGG | 0.664040 | 1_1:-18276361 | Msa0012170:CDS |
| CATTGGAGAATGACACCAAG+AGG | 0.667584 | 1_1:+18277379 | None:intergenic |
| CCTGATGGAACAAAAGAGGA+TGG | 0.675641 | 1_1:-18276382 | Msa0012170:CDS |
| GAGAAAGAATTTAACACAGG+AGG | 0.675983 | 1_1:+18282384 | None:intergenic |
| GGAATCAAGATGAAGCTTGG+GGG | 0.676324 | 1_1:-18275587 | Msa0012170:three_prime_UTR |
| AGCTTCATTAGTCAACCCAA+CGG | 0.678054 | 1_1:+18284647 | None:intergenic |
| TCGGAGAAAGAATTTAACAC+AGG | 0.679939 | 1_1:+18282381 | None:intergenic |
| TTTCGTAAAGCTTATCGGCG+AGG | 0.680957 | 1_1:+18285205 | None:intergenic |
| ACTGAATAGAGAGCCTTCTG+GGG | 0.693100 | 1_1:-18276431 | Msa0012170:CDS |
| CGGCATTCAAAAGCACACAA+AGG | 0.693511 | 1_1:+18278988 | None:intergenic |
| GTGCATATGAACTTTGAATG+GGG | 0.701952 | 1_1:-18275692 | Msa0012170:three_prime_UTR |
| CAATCCTCTCCATTGCAAGG+AGG | 0.713214 | 1_1:-18280586 | Msa0012170:intron |
| TAGGTTAACAGCTATCACAT+GGG | 0.732638 | 1_1:-18281078 | Msa0012170:intron |
| GCACGATTGAAAGAATACGA+TGG | 0.736541 | 1_1:+18276457 | None:intergenic |
| GGCGAGGTTACGGAGCACGG+CGG | 0.770251 | 1_1:+18285221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAATTTAAAATA+GGG | + | chr1_1:18282880-18282899 | None:intergenic | 0.0% |
| !!! | ATTTTTAAAAAATTTAAAAT+AGG | + | chr1_1:18282881-18282900 | None:intergenic | 0.0% |
| !!! | AAACTTATGTTTTTATATTT+TGG | - | chr1_1:18276242-18276261 | Msa0012170:CDS | 10.0% |
| !! | AAAAAAATTACTTTAATCAT+AGG | + | chr1_1:18277608-18277627 | None:intergenic | 10.0% |
| !!! | TTTGATTTAATAAAAAAAAG+GGG | + | chr1_1:18281216-18281235 | None:intergenic | 10.0% |
| !!! | TGAATTTTTTAATATCAAAT+AGG | - | chr1_1:18281768-18281787 | Msa0012170:CDS | 10.0% |
| !!! | ATTTTTTAAAACATTAATGT+TGG | + | chr1_1:18282800-18282819 | None:intergenic | 10.0% |
| !!! | GAAAATCATAATATTTTTTA+GGG | - | chr1_1:18283121-18283140 | Msa0012170:intron | 10.0% |
| !! | AAATTTAATTACATAAATAG+GGG | + | chr1_1:18283842-18283861 | None:intergenic | 10.0% |
| !! | CAAATTTAATTACATAAATA+GGG | + | chr1_1:18283843-18283862 | None:intergenic | 10.0% |
| !!! | AGAATCATATTTTATAATTA+GGG | + | chr1_1:18284078-18284097 | None:intergenic | 10.0% |
| !!! | AAGAATCATATTTTATAATT+AGG | + | chr1_1:18284079-18284098 | None:intergenic | 10.0% |
| !! | ATTATAAAATATGATTCTTA+TGG | - | chr1_1:18284080-18284099 | Msa0012170:intron | 10.0% |
| !!! | AAATTTGAAGTTTCTTTTTT+AGG | + | chr1_1:18275485-18275504 | None:intergenic | 15.0% |
| !!! | AATGGAAATTTTGATTTTAT+TGG | + | chr1_1:18275618-18275637 | None:intergenic | 15.0% |
| !!! | ATTAATATGAAATTCGTTTT+CGG | + | chr1_1:18275685-18275704 | None:intergenic | 15.0% |
| !!! | ATTTTGGGTATTATTTAAAT+TGG | + | chr1_1:18276095-18276114 | None:intergenic | 15.0% |
| !!! | ATCATTTTCAAAATTAATCT+AGG | - | chr1_1:18276975-18276994 | Msa0012170:intron | 15.0% |
| !! | TTAAAGTTAAAAATTGTGTT+AGG | - | chr1_1:18277096-18277115 | Msa0012170:CDS | 15.0% |
| !! | GATATTCTAATTCTAATATT+TGG | - | chr1_1:18277744-18277763 | Msa0012170:intron | 15.0% |
| !! | TAATCAAAAATCTATACATA+GGG | + | chr1_1:18280864-18280883 | None:intergenic | 15.0% |
| !! | ATAATCAAAAATCTATACAT+AGG | + | chr1_1:18280865-18280884 | None:intergenic | 15.0% |
| !!! | ATGTATAGATTTTTGATTAT+AGG | - | chr1_1:18280865-18280884 | Msa0012170:CDS | 15.0% |
| !!! | TAAAATGAAGTTTTAATGAA+AGG | + | chr1_1:18281966-18281985 | None:intergenic | 15.0% |
| !!! | CATTTTATACAATTAAATCT+AGG | - | chr1_1:18281979-18281998 | Msa0012170:intron | 15.0% |
| !! | CAAACAAAAATATTATATTG+AGG | - | chr1_1:18283008-18283027 | Msa0012170:intron | 15.0% |
| !!! | GGAAAATCATAATATTTTTT+AGG | - | chr1_1:18283120-18283139 | Msa0012170:intron | 15.0% |
| !! | CCAAATTTAATTACATAAAT+AGG | + | chr1_1:18283844-18283863 | None:intergenic | 15.0% |
| !! | CCTATTTATGTAATTAAATT+TGG | - | chr1_1:18283841-18283860 | Msa0012170:intron | 15.0% |
| !! | TTATTATAGTATTAGTTATG+TGG | - | chr1_1:18284115-18284134 | Msa0012170:intron | 15.0% |
| !! | AGTAAAGTTTCTTATAATTT+AGG | - | chr1_1:18285549-18285568 | Msa0012170:five_prime_UTR | 15.0% |
| !! | GTAAAGTTTCTTATAATTTA+GGG | - | chr1_1:18285550-18285569 | Msa0012170:five_prime_UTR | 15.0% |
| !!! | ATTTTGGTATTGTTGATTAT+TGG | - | chr1_1:18276258-18276277 | Msa0012170:CDS | 20.0% |
| !!! | TGTGATTATTGTTATTGTAT+TGG | - | chr1_1:18276305-18276324 | Msa0012170:CDS | 20.0% |
| !!! | AATTGATAGCTAACTTTTAA+GGG | + | chr1_1:18276904-18276923 | None:intergenic | 20.0% |
| !!! | TAATTGATAGCTAACTTTTA+AGG | + | chr1_1:18276905-18276924 | None:intergenic | 20.0% |
| !! | TTTCAAAATTAATCTAGGTA+CGG | - | chr1_1:18276980-18276999 | Msa0012170:intron | 20.0% |
| !!! | CTTATATTGTTTTCTACATT+CGG | + | chr1_1:18277428-18277447 | None:intergenic | 20.0% |
| !!! | AACAATATAAGAAAGTATCT+TGG | - | chr1_1:18277437-18277456 | Msa0012170:CDS | 20.0% |
| !!! | GTTGAATAATTCACTTTTTA+TGG | - | chr1_1:18277502-18277521 | Msa0012170:intron | 20.0% |
| !! | TTTCCATTTAAACTTATATC+AGG | - | chr1_1:18277638-18277657 | Msa0012170:intron | 20.0% |
| !! | ACACAGAAAAATAATGTAAA+TGG | + | chr1_1:18277960-18277979 | None:intergenic | 20.0% |
| !! | GTCATTTACATTATTATTCT+GGG | - | chr1_1:18278109-18278128 | Msa0012170:intron | 20.0% |
| !! | ATAGATAATACTAAATGATG+TGG | + | chr1_1:18278414-18278433 | None:intergenic | 20.0% |
| !! | TTAATTAGCTAATCTCTATT+TGG | + | chr1_1:18278989-18279008 | None:intergenic | 20.0% |
| !! | TAATCAGTAGTTAATCTAAA+AGG | + | chr1_1:18279022-18279041 | None:intergenic | 20.0% |
| !! | AAGAATTTATACCATTATTG+AGG | - | chr1_1:18279233-18279252 | Msa0012170:intron | 20.0% |
| !! | AGAATTTATACCATTATTGA+GGG | - | chr1_1:18279234-18279253 | Msa0012170:intron | 20.0% |
| !!! | TTGATTTTGTACAAAAATGT+CGG | + | chr1_1:18279405-18279424 | None:intergenic | 20.0% |
| !! | TATATTAGAAGAAATCTTAC+TGG | + | chr1_1:18279553-18279572 | None:intergenic | 20.0% |
| !! | ATAGATAAAATCCTTAACAT+GGG | + | chr1_1:18279704-18279723 | None:intergenic | 20.0% |
| !! | AATAGATAAAATCCTTAACA+TGG | + | chr1_1:18279705-18279724 | None:intergenic | 20.0% |
| !! | TAAATTGTAAAAAGAAAGTG+GGG | + | chr1_1:18280229-18280248 | None:intergenic | 20.0% |
| !! | GTAAATTGTAAAAAGAAAGT+GGG | + | chr1_1:18280230-18280249 | None:intergenic | 20.0% |
| !! | AGTAAATTGTAAAAAGAAAG+TGG | + | chr1_1:18280231-18280250 | None:intergenic | 20.0% |
| !!! | AATGTGAAATAATTTGTTTC+TGG | - | chr1_1:18280322-18280341 | Msa0012170:CDS | 20.0% |
| !!! | GAAAAAAATGATTTTTACAG+TGG | - | chr1_1:18280506-18280525 | Msa0012170:intron | 20.0% |
| !! | AAAATTGCAATTATTTGTCA+AGG | + | chr1_1:18281287-18281306 | None:intergenic | 20.0% |
| !! | TTAAACAATATAGCATACAA+GGG | + | chr1_1:18281702-18281721 | None:intergenic | 20.0% |
| !! | ATTAAACAATATAGCATACA+AGG | + | chr1_1:18281703-18281722 | None:intergenic | 20.0% |
| !! | TATGCTATATTGTTTAATTG+TGG | - | chr1_1:18281705-18281724 | Msa0012170:CDS | 20.0% |
| !! | ACATAACTATTTCGATTAAT+GGG | - | chr1_1:18282220-18282239 | Msa0012170:CDS | 20.0% |
| !! | TAAACAAAATAACTTTATGG+AGG | + | chr1_1:18282908-18282927 | None:intergenic | 20.0% |
| !! | TGGTAAACAAAATAACTTTA+TGG | + | chr1_1:18282911-18282930 | None:intergenic | 20.0% |
| !! | TAGATAATAGTGAAATGTAA+TGG | - | chr1_1:18283086-18283105 | Msa0012170:intron | 20.0% |
| !! | CATGCACATTAAATTAAAAA+TGG | + | chr1_1:18284029-18284048 | None:intergenic | 20.0% |
| !! | TATCTTAAAAGTCTTACAAT+GGG | + | chr1_1:18284963-18284982 | None:intergenic | 20.0% |
| !! | TTATCTTAAAAGTCTTACAA+TGG | + | chr1_1:18284964-18284983 | None:intergenic | 20.0% |
| !!! | TTAGCATTATTTCTATCTTT+CGG | + | chr1_1:18285601-18285620 | None:intergenic | 20.0% |
| ! | GTGAAATTGTAGTTGAAATT+TGG | + | chr1_1:18275517-18275536 | None:intergenic | 25.0% |
| ! | TGAAAATCAGATCTAGAAAT+TGG | + | chr1_1:18275566-18275585 | None:intergenic | 25.0% |
| ! | TTAGTTGATTGTTGAGAATT+TGG | - | chr1_1:18275883-18275902 | Msa0012170:intron | 25.0% |
| !! | AAAATGTCAGAGACTATTTT+GGG | + | chr1_1:18276110-18276129 | None:intergenic | 25.0% |
| !! | AGTTTCTTTGTTATAATGAG+TGG | - | chr1_1:18276142-18276161 | Msa0012170:intron | 25.0% |
| !! | GTTTCTTTGTTATAATGAGT+GGG | - | chr1_1:18276143-18276162 | Msa0012170:intron | 25.0% |
| !! | TTTCTTTGTTATAATGAGTG+GGG | - | chr1_1:18276144-18276163 | Msa0012170:intron | 25.0% |
| !! | TTATTGTATTGGTATGATGA+AGG | - | chr1_1:18276316-18276335 | Msa0012170:CDS | 25.0% |
| !! | TATTGTATTGGTATGATGAA+GGG | - | chr1_1:18276317-18276336 | Msa0012170:CDS | 25.0% |
| ! | AAGTTATGCAAAGTTTATCA+CGG | - | chr1_1:18276524-18276543 | Msa0012170:intron | 25.0% |
| ! | TGAAATTAGAATCTTCATAG+TGG | - | chr1_1:18276555-18276574 | Msa0012170:intron | 25.0% |
| ! | CTTAAATAGCATTCTATGAA+GGG | - | chr1_1:18276669-18276688 | Msa0012170:intron | 25.0% |
| ! | TTCAAAATTAATCTAGGTAC+GGG | - | chr1_1:18276981-18277000 | Msa0012170:intron | 25.0% |
| ! | ATTATAAGATAAAGTGGGAA+GGG | + | chr1_1:18277479-18277498 | None:intergenic | 25.0% |
| ! | TTCCCACTTTATCTTATAAT+GGG | - | chr1_1:18277479-18277498 | Msa0012170:CDS | 25.0% |
| ! | ATTCTACAAACACTAAAGAA+GGG | + | chr1_1:18277538-18277557 | None:intergenic | 25.0% |
| ! | AATTCTACAAACACTAAAGA+AGG | + | chr1_1:18277539-18277558 | None:intergenic | 25.0% |
| ! | AAGCCTGATATAAGTTTAAA+TGG | + | chr1_1:18277644-18277663 | None:intergenic | 25.0% |
| ! | TATTATTCTGTGTCAATATG+TGG | - | chr1_1:18277773-18277792 | Msa0012170:intron | 25.0% |
| ! | AACAGATAATAATAATGGCA+AGG | + | chr1_1:18277912-18277931 | None:intergenic | 25.0% |
| ! | TGTGCAACAGATAATAATAA+TGG | + | chr1_1:18277917-18277936 | None:intergenic | 25.0% |
| !! | ATCTGTTGCACAATTAATTT+TGG | - | chr1_1:18277925-18277944 | Msa0012170:intron | 25.0% |
| ! | GAAAAATAATGTAAATGGCA+TGG | + | chr1_1:18277955-18277974 | None:intergenic | 25.0% |
| !! | TATTTTTCTGTGTAAATGTG+TGG | - | chr1_1:18277967-18277986 | Msa0012170:intron | 25.0% |
| !! | ATCTGTTGCACTATTAATTT+TGG | - | chr1_1:18278078-18278097 | Msa0012170:intron | 25.0% |
| ! | GAATAATAATGTAAATGACG+TGG | + | chr1_1:18278108-18278127 | None:intergenic | 25.0% |
| ! | CGTCATTTACATTATTATTC+TGG | - | chr1_1:18278108-18278127 | Msa0012170:intron | 25.0% |
| !! | ATCTGTTGCACAATTAATTT+TGG | - | chr1_1:18277925-18277944 | Msa0012170:intron | 25.0% |
| !! | ATCTGTTGCACAATTAATTT+TGG | - | chr1_1:18277925-18277944 | Msa0012170:intron | 25.0% |
| ! | ATCTATTGCACAATTAATCT+TGG | - | chr1_1:18278428-18278447 | Msa0012170:intron | 25.0% |
| ! | AAAGATTATACTAAATGACG+TGG | + | chr1_1:18278458-18278477 | None:intergenic | 25.0% |
| ! | AATATCAAGAAATGAAAGCA+GGG | + | chr1_1:18279205-18279224 | None:intergenic | 25.0% |
| !! | TGATTTTGTACAAAAATGTC+GGG | + | chr1_1:18279404-18279423 | None:intergenic | 25.0% |
| !!! | TAATCATTTTTAAATGCCTC+AGG | - | chr1_1:18279436-18279455 | Msa0012170:intron | 25.0% |
| ! | AAAAATGATAAAAGCAGAAC+TGG | + | chr1_1:18279623-18279642 | None:intergenic | 25.0% |
| ! | ATAAATGAGTTTGTCAAACT+TGG | - | chr1_1:18280102-18280121 | Msa0012170:intron | 25.0% |
| ! | TAAAGAAGAGAAAATTAGAG+TGG | - | chr1_1:18280188-18280207 | Msa0012170:intron | 25.0% |
| ! | CTATAGTTGGTTAAACAAAA+GGG | + | chr1_1:18280571-18280590 | None:intergenic | 25.0% |
| ! | ACTATAGTTGGTTAAACAAA+AGG | + | chr1_1:18280572-18280591 | None:intergenic | 25.0% |
| !!! | ATTATTCTGTGTACTGATTT+TGG | - | chr1_1:18280600-18280619 | Msa0012170:CDS | 25.0% |
| !!! | TTATTCTGTGTACTGATTTT+GGG | - | chr1_1:18280601-18280620 | Msa0012170:CDS | 25.0% |
| !!! | TCTTCTGTTTTGATACATTA+AGG | - | chr1_1:18280742-18280761 | Msa0012170:intron | 25.0% |
| ! | GGATTGAAAAACATACAATT+TGG | - | chr1_1:18280948-18280967 | Msa0012170:intron | 25.0% |
| ! | GAGAAAGTCAAAGAATAAAT+TGG | + | chr1_1:18280977-18280996 | None:intergenic | 25.0% |
| ! | TTTACATTCCATATATCCAT+TGG | - | chr1_1:18281060-18281079 | Msa0012170:intron | 25.0% |
| ! | AAAAAAAAGGGGATAAAAGA+AGG | + | chr1_1:18281205-18281224 | None:intergenic | 25.0% |
| ! | AATAATTGCAATACCGAATA+TGG | - | chr1_1:18281379-18281398 | Msa0012170:intron | 25.0% |
| !!! | ATTTTTCTTTAAAGCCACAT+TGG | - | chr1_1:18281490-18281509 | Msa0012170:CDS | 25.0% |
| ! | TAAGAAGTCATTCCTAATAT+GGG | + | chr1_1:18281522-18281541 | None:intergenic | 25.0% |
| ! | AATTCATGTGAATAATTTCC+AGG | + | chr1_1:18281734-18281753 | None:intergenic | 25.0% |
| ! | CTAATATTGTAGAAAGTTCA+CGG | + | chr1_1:18282061-18282080 | None:intergenic | 25.0% |
| ! | GAACTTTCTACAATATTAGA+AGG | - | chr1_1:18282062-18282081 | Msa0012170:intron | 25.0% |
| !! | TTTGGATTTTGCATCAATTA+TGG | - | chr1_1:18282094-18282113 | Msa0012170:intron | 25.0% |
| ! | TAATAATATGCTGTGTTATG+TGG | - | chr1_1:18282189-18282208 | Msa0012170:CDS | 25.0% |
| ! | GACATAACTATTTCGATTAA+TGG | - | chr1_1:18282219-18282238 | Msa0012170:CDS | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1_1:18282437-18282456 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr1_1:18282454-18282473 | Msa0012170:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1_1:18282579-18282598 | None:intergenic | 25.0% |
| !!! | ATTATGGAGTACATGTTTTT+TGG | - | chr1_1:18282820-18282839 | Msa0012170:intron | 25.0% |
| !! | GGAAAATAGCAAAATTTTGA+GGG | + | chr1_1:18282847-18282866 | None:intergenic | 25.0% |
| !!! | ATTATATTGAGGACTTGTTA+AGG | - | chr1_1:18283019-18283038 | Msa0012170:intron | 25.0% |
| !! | AGCACCATTAATTATGTTTT+CGG | + | chr1_1:18283066-18283085 | None:intergenic | 25.0% |
| ! | ATAATAGTGAAATGTAATGG+AGG | - | chr1_1:18283089-18283108 | Msa0012170:intron | 25.0% |
| !!! | AAGTTTGCTAAATATGTTGT+TGG | + | chr1_1:18283152-18283171 | None:intergenic | 25.0% |
| ! | AAACTTAAATTGTACTTCGA+TGG | - | chr1_1:18283166-18283185 | Msa0012170:intron | 25.0% |
| ! | CAAAAAGATAATATTGCCAA+TGG | + | chr1_1:18283380-18283399 | None:intergenic | 25.0% |
| ! | GGTATATATCATCTATAACT+TGG | - | chr1_1:18283686-18283705 | Msa0012170:intron | 25.0% |
| !!! | GTAATCATTTTTTTTTTCCG+TGG | - | chr1_1:18283785-18283804 | Msa0012170:intron | 25.0% |
| !! | GGATATAAATGTGAAGTTTT+TGG | - | chr1_1:18283923-18283942 | Msa0012170:intron | 25.0% |
| !! | AATCTAAGATAAGCAAAGAT+TGG | + | chr1_1:18283984-18284003 | None:intergenic | 25.0% |
| !! | ATTTTATAATTAGGGACGAA+TGG | + | chr1_1:18284070-18284089 | None:intergenic | 25.0% |
| !!! | TATTTTTTAAACTTCAGTGC+TGG | - | chr1_1:18284356-18284375 | Msa0012170:intron | 25.0% |
| !!! | ACGAGTTTTTAGTATCTTAA+AGG | + | chr1_1:18284524-18284543 | None:intergenic | 25.0% |
| !!! | TAATGTTGTTTCTATCTATG+TGG | - | chr1_1:18285288-18285307 | Msa0012170:five_prime_UTR | 25.0% |
| !!! | TCGTTTTATTTATAGAGGTT+GGG | - | chr1_1:18285384-18285403 | Msa0012170:five_prime_UTR | 25.0% |
| !!! | TATTTTTGTTGAAATCCTTG+TGG | - | chr1_1:18285505-18285524 | Msa0012170:five_prime_UTR | 25.0% |
| !! | ATTTTTGTTGAAATCCTTGT+GGG | - | chr1_1:18285506-18285525 | Msa0012170:five_prime_UTR | 25.0% |
| CAACTACAATTTCACACAAA+CGG | - | chr1_1:18275522-18275541 | Msa0012170:three_prime_UTR | 30.0% | |
| TCAGATCTAGAAATTGGAAT+TGG | + | chr1_1:18275560-18275579 | None:intergenic | 30.0% | |
| ! | TTTTATTGGAATTGCGATTC+AGG | + | chr1_1:18275604-18275623 | None:intergenic | 30.0% |
| ! | GAGAATTTGGTGAAATTTGA+CGG | - | chr1_1:18275896-18275915 | Msa0012170:intron | 30.0% |
| AGTAATCTTATCATGATCAC+CGG | + | chr1_1:18275970-18275989 | None:intergenic | 30.0% | |
| TTGTGGCGAATAAGTAAATT+CGG | + | chr1_1:18276015-18276034 | None:intergenic | 30.0% | |
| ! | GAATTATCACAATTTTACCG+CGG | - | chr1_1:18276068-18276087 | Msa0012170:intron | 30.0% |
| GTATTATTTAAATTGGACCG+CGG | + | chr1_1:18276088-18276107 | None:intergenic | 30.0% | |
| ! | GAAAATGTCAGAGACTATTT+TGG | + | chr1_1:18276111-18276130 | None:intergenic | 30.0% |
| AGTTATGCAAAGTTTATCAC+GGG | - | chr1_1:18276525-18276544 | Msa0012170:intron | 30.0% | |
| GCTTAAATAGCATTCTATGA+AGG | - | chr1_1:18276668-18276687 | Msa0012170:intron | 30.0% | |
| CGTATAGTAATTAAGTAGCT+GGG | + | chr1_1:18276702-18276721 | None:intergenic | 30.0% | |
| TCGTATAGTAATTAAGTAGC+TGG | + | chr1_1:18276703-18276722 | None:intergenic | 30.0% | |
| GTTAGTAACTCAGGTATTAT+GGG | + | chr1_1:18276760-18276779 | None:intergenic | 30.0% | |
| TGTTAGTAACTCAGGTATTA+TGG | + | chr1_1:18276761-18276780 | None:intergenic | 30.0% | |
| TATTCTGCAAGTGATTCATT+TGG | - | chr1_1:18276817-18276836 | Msa0012170:intron | 30.0% | |
| TCATCAATTGATATCAGAGA+GGG | + | chr1_1:18276857-18276876 | None:intergenic | 30.0% | |
| TCAACAGAGATAGGTATAAT+GGG | + | chr1_1:18277367-18277386 | None:intergenic | 30.0% | |
| ATTATACCTATCTCTGTTGA+GGG | - | chr1_1:18277367-18277386 | Msa0012170:CDS | 30.0% | |
| CATTATAAGATAAAGTGGGA+AGG | + | chr1_1:18277480-18277499 | None:intergenic | 30.0% | |
| CTTCCCACTTTATCTTATAA+TGG | - | chr1_1:18277478-18277497 | Msa0012170:CDS | 30.0% | |
| TCCCACTTTATCTTATAATG+GGG | - | chr1_1:18277480-18277499 | Msa0012170:CDS | 30.0% | |
| ACCCCATTATAAGATAAAGT+GGG | + | chr1_1:18277484-18277503 | None:intergenic | 30.0% | |
| AACCCCATTATAAGATAAAG+TGG | + | chr1_1:18277485-18277504 | None:intergenic | 30.0% | |
| TATGTTCTTACTCAATAGGA+GGG | + | chr1_1:18277574-18277593 | None:intergenic | 30.0% | |
| ACACTATGTTCTTACTCAAT+AGG | + | chr1_1:18277578-18277597 | None:intergenic | 30.0% | |
| CTATATAGCACGATAAATTC+TGG | - | chr1_1:18277840-18277859 | Msa0012170:intron | 30.0% | |
| ! | CTATATAGCTCGAGAAATTT+TGG | - | chr1_1:18278034-18278053 | Msa0012170:intron | 30.0% |
| ACAGATAATACTAAATGACG+TGG | + | chr1_1:18278064-18278083 | None:intergenic | 30.0% | |
| ACAGATAATACTAAATGACG+TGG | + | chr1_1:18278064-18278083 | None:intergenic | 30.0% | |
| CAGTAATGATGAAAATTACG+TGG | + | chr1_1:18278261-18278280 | None:intergenic | 30.0% | |
| TTTGCATTGTCTATTTAGCA+TGG | - | chr1_1:18278330-18278349 | Msa0012170:intron | 30.0% | |
| TTGCATTGTCTATTTAGCAT+GGG | - | chr1_1:18278331-18278350 | Msa0012170:intron | 30.0% | |
| ! | CTATTTAGCATGGGAAATTT+TGG | - | chr1_1:18278340-18278359 | Msa0012170:intron | 30.0% |
| AGCACTATATAACATTGCTA+AGG | - | chr1_1:18278688-18278707 | Msa0012170:intron | 30.0% | |
| TATATAACATTGCTAAGGTG+AGG | - | chr1_1:18278693-18278712 | Msa0012170:intron | 30.0% | |
| CAACAAAACACAATTCACAT+TGG | + | chr1_1:18278770-18278789 | None:intergenic | 30.0% | |
| ! | ACACTCTAATCTTTTAACAC+AGG | - | chr1_1:18279041-18279060 | Msa0012170:intron | 30.0% |
| TATCAACAAGTCTCTTTGAA+AGG | + | chr1_1:18279144-18279163 | None:intergenic | 30.0% | |
| GAAGCAGTATAAGTTACATT+AGG | + | chr1_1:18279176-18279195 | None:intergenic | 30.0% | |
| ATATCAAGAAATGAAAGCAG+GGG | + | chr1_1:18279204-18279223 | None:intergenic | 30.0% | |
| GAATATCAAGAAATGAAAGC+AGG | + | chr1_1:18279206-18279225 | None:intergenic | 30.0% | |
| ! | TTTCTTCCTGATTTTCTTGA+TGG | - | chr1_1:18279349-18279368 | Msa0012170:intron | 30.0% |
| CAACATATTAAACAAACCTG+AGG | + | chr1_1:18279455-18279474 | None:intergenic | 30.0% | |
| ! | TGTTTGAGTAGCAATTCTTT+TGG | - | chr1_1:18279584-18279603 | Msa0012170:intron | 30.0% |
| !!! | CAATTCTTTTGGAATTCTTC+AGG | - | chr1_1:18279595-18279614 | Msa0012170:intron | 30.0% |
| GTTAACCTAGTAAATTCATC+TGG | + | chr1_1:18279924-18279943 | None:intergenic | 30.0% | |
| TCTTCTTTATCAGATATGCA+AGG | + | chr1_1:18280177-18280196 | None:intergenic | 30.0% | |
| AAGAGAAAATTAGAGTGGTA+GGG | - | chr1_1:18280193-18280212 | Msa0012170:intron | 30.0% | |
| ACACTAAAATATGGGACAAA+TGG | + | chr1_1:18280265-18280284 | None:intergenic | 30.0% | |
| !! | TTGTTTCTGGCTTATTTGTA+AGG | - | chr1_1:18280335-18280354 | Msa0012170:CDS | 30.0% |
| TAATCAGTGCAAACTATAGT+TGG | + | chr1_1:18280584-18280603 | None:intergenic | 30.0% | |
| AATACGATGTCTGTTTAACA+GGG | + | chr1_1:18280701-18280720 | None:intergenic | 30.0% | |
| CAATTTACTGTTTGATCATG+AGG | - | chr1_1:18280927-18280946 | Msa0012170:intron | 30.0% | |
| CATTATCACCAATGGATATA+TGG | + | chr1_1:18281071-18281090 | None:intergenic | 30.0% | |
| GGTATTGCAATTATTTGTCA+AGG | + | chr1_1:18281374-18281393 | None:intergenic | 30.0% | |
| ! | AAGAACAAGTTGAAATCCTA+TGG | + | chr1_1:18281460-18281479 | None:intergenic | 30.0% |
| AAGAAGTCATTCCTAATATG+GGG | + | chr1_1:18281521-18281540 | None:intergenic | 30.0% | |
| GTAAGAAGTCATTCCTAATA+TGG | + | chr1_1:18281523-18281542 | None:intergenic | 30.0% | |
| AATAACAAACCAGAGACTAA+TGG | + | chr1_1:18281628-18281647 | None:intergenic | 30.0% | |
| ATTGTTTAATTGTGGAAACC+TGG | - | chr1_1:18281713-18281732 | Msa0012170:CDS | 30.0% | |
| ! | CAGACTAGATAATTCTCTTT+TGG | - | chr1_1:18281879-18281898 | Msa0012170:intron | 30.0% |
| ACTAGAAGAATACATATGAC+CGG | + | chr1_1:18281928-18281947 | None:intergenic | 30.0% | |
| TATACAATTAAATCTAGGCG+TGG | - | chr1_1:18281984-18282003 | Msa0012170:intron | 30.0% | |
| ATTAGAAGGAGAATCTGATT+TGG | - | chr1_1:18282076-18282095 | Msa0012170:intron | 30.0% | |
| ! | TTTTGCATCAATTATGGTTC+AGG | - | chr1_1:18282100-18282119 | Msa0012170:intron | 30.0% |
| ! | AACTATTTCGATTAATGGGT+AGG | - | chr1_1:18282224-18282243 | Msa0012170:intron | 30.0% |
| TCTTTGATAGAACATTATGG+CGG | + | chr1_1:18282390-18282409 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1_1:18282393-18282412 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr1_1:18282397-18282416 | Msa0012170:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1_1:18282432-18282451 | Msa0012170:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1_1:18282583-18282602 | Msa0012170:intron | 30.0% |
| ! | GGGAAAATAGCAAAATTTTG+AGG | + | chr1_1:18282848-18282867 | None:intergenic | 30.0% |
| TTAAAATAGGGAGAGCAAAT+GGG | + | chr1_1:18282868-18282887 | None:intergenic | 30.0% | |
| ! | TTTAAAATAGGGAGAGCAAA+TGG | + | chr1_1:18282869-18282888 | None:intergenic | 30.0% |
| CACTTAACAATTGAATGCAA+TGG | + | chr1_1:18282955-18282974 | None:intergenic | 30.0% | |
| GAGACCGAAAACATAATTAA+TGG | - | chr1_1:18283059-18283078 | Msa0012170:intron | 30.0% | |
| !! | AAATGTAATGGAGGTGTTAA+TGG | - | chr1_1:18283098-18283117 | Msa0012170:intron | 30.0% |
| !! | AATGTAATGGAGGTGTTAAT+GGG | - | chr1_1:18283099-18283118 | Msa0012170:intron | 30.0% |
| AAATTGATTATAGCCTACGA+TGG | + | chr1_1:18283278-18283297 | None:intergenic | 30.0% | |
| CCCAAAAACATCTAAAGAAA+GGG | + | chr1_1:18283340-18283359 | None:intergenic | 30.0% | |
| ! | CCCTTTCTTTAGATGTTTTT+GGG | - | chr1_1:18283337-18283356 | Msa0012170:intron | 30.0% |
| !! | CCTTTCTTTAGATGTTTTTG+GGG | - | chr1_1:18283338-18283357 | Msa0012170:intron | 30.0% |
| !! | TCCCTTTGAAAAAACTTTTC+AGG | - | chr1_1:18283503-18283522 | Msa0012170:intron | 30.0% |
| !!! | GCCTGAAAAGTTTTTTCAAA+GGG | + | chr1_1:18283507-18283526 | None:intergenic | 30.0% |
| !!! | AGCCTGAAAAGTTTTTTCAA+AGG | + | chr1_1:18283508-18283527 | None:intergenic | 30.0% |
| !!! | AGATCTTTTAAAGCAATCAC+TGG | - | chr1_1:18283572-18283591 | Msa0012170:intron | 30.0% |
| AGAAATATACAAATCCTTCC+CGG | + | chr1_1:18283607-18283626 | None:intergenic | 30.0% | |
| ATATTTCTTTGTATGCCTCT+TGG | - | chr1_1:18283619-18283638 | Msa0012170:intron | 30.0% | |
| GGAGAAAGAAAGACTTAAAA+TGG | + | chr1_1:18283728-18283747 | None:intergenic | 30.0% | |
| !! | GATCTAGCTTTAGCTTTATT+TGG | - | chr1_1:18283807-18283826 | Msa0012170:intron | 30.0% |
| AGTATTAGTTATGTGGCTAA+AGG | - | chr1_1:18284122-18284141 | Msa0012170:intron | 30.0% | |
| AATAGCCATAAATATCTTGC+AGG | + | chr1_1:18284217-18284236 | None:intergenic | 30.0% | |
| !! | TTTTTAATTGCAGATACCTG+AGG | + | chr1_1:18284271-18284290 | None:intergenic | 30.0% |
| TGTGTTTCAACATCCTTTAT+TGG | - | chr1_1:18284326-18284345 | Msa0012170:intron | 30.0% | |
| TTTCAACATCCTTTATTGGT+AGG | - | chr1_1:18284330-18284349 | Msa0012170:intron | 30.0% | |
| AAAATACCTCCTACCAATAA+AGG | + | chr1_1:18284342-18284361 | None:intergenic | 30.0% | |
| TTTGTCCACTACATTATCAA+AGG | - | chr1_1:18284813-18284832 | Msa0012170:intron | 30.0% | |
| !! | GTGATTTGTGATTGATTTGA+CGG | + | chr1_1:18284941-18284960 | None:intergenic | 30.0% |
| GCAAAAATTATTTACCCTGT+CGG | - | chr1_1:18285038-18285057 | Msa0012170:intron | 30.0% | |
| ! | TCATTGTTTTCACTATATGC+AGG | - | chr1_1:18285164-18285183 | Msa0012170:intron | 30.0% |
| AGTGCATATGAACTTTGAAT+GGG | - | chr1_1:18285320-18285339 | Msa0012170:five_prime_UTR | 30.0% | |
| !!! | GTAGCTCGTTTTATTTATAG+AGG | - | chr1_1:18285379-18285398 | Msa0012170:five_prime_UTR | 30.0% |
| !!! | CTCGTTTTATTTATAGAGGT+TGG | - | chr1_1:18285383-18285402 | Msa0012170:five_prime_UTR | 30.0% |
| TTTATTTATAGAGGTTGGGA+TGG | - | chr1_1:18285388-18285407 | Msa0012170:five_prime_UTR | 30.0% | |
| CTGATTTCAACCTGTTTCAA+TGG | - | chr1_1:18275745-18275764 | Msa0012170:exon | 35.0% | |
| ATTTCAACCTGTTTCAATGG+CGG | - | chr1_1:18275748-18275767 | Msa0012170:exon | 35.0% | |
| ! | GCGTTTTTCGTAAAGCTTAT+CGG | + | chr1_1:18275816-18275835 | None:intergenic | 35.0% |
| GAAATTTGACGGAATTGTTG+TGG | - | chr1_1:18275907-18275926 | Msa0012170:intron | 35.0% | |
| ! | ATTGTTGTGGAATTAGGTTG+AGG | - | chr1_1:18275920-18275939 | Msa0012170:intron | 35.0% |
| !! | TTGTTGTGGAATTAGGTTGA+GGG | - | chr1_1:18275921-18275940 | Msa0012170:intron | 35.0% |
| ! | AGTCTCTGACATTTTCATAC+TGG | - | chr1_1:18276115-18276134 | Msa0012170:intron | 35.0% |
| ! | GTCTCTGACATTTTCATACT+GGG | - | chr1_1:18276116-18276135 | Msa0012170:intron | 35.0% |
| AGCGACTAATGAAAATTGTG+AGG | - | chr1_1:18276195-18276214 | Msa0012170:intron | 35.0% | |
| GCGACTAATGAAAATTGTGA+GGG | - | chr1_1:18276196-18276215 | Msa0012170:intron | 35.0% | |
| AAAATTGTGAGGGATCGAAA+TGG | - | chr1_1:18276206-18276225 | Msa0012170:CDS | 35.0% | |
| AAATTGTGAGGGATCGAAAT+GGG | - | chr1_1:18276207-18276226 | Msa0012170:CDS | 35.0% | |
| TATGGTTGTACTTGCAATCT+TGG | - | chr1_1:18276489-18276508 | Msa0012170:CDS | 35.0% | |
| !! | AGAATCTTCATAGTGGACAT+TGG | - | chr1_1:18276562-18276581 | Msa0012170:intron | 35.0% |
| TTTATGTGTATGTGAGCTTC+AGG | - | chr1_1:18276607-18276626 | Msa0012170:intron | 35.0% | |
| TTATGTGTATGTGAGCTTCA+GGG | - | chr1_1:18276608-18276627 | Msa0012170:intron | 35.0% | |
| ACATCTCATACTAATCGATG+TGG | - | chr1_1:18276724-18276743 | Msa0012170:intron | 35.0% | |
| CATCTCATACTAATCGATGT+GGG | - | chr1_1:18276725-18276744 | Msa0012170:intron | 35.0% | |
| GGATACTATGTTAGTAACTC+AGG | + | chr1_1:18276769-18276788 | None:intergenic | 35.0% | |
| CATCAATTGATATCAGAGAG+GGG | + | chr1_1:18276856-18276875 | None:intergenic | 35.0% | |
| CTCATCAATTGATATCAGAG+AGG | + | chr1_1:18276858-18276877 | None:intergenic | 35.0% | |
| !! | TGATAGCTAACTTTTAAGGG+AGG | + | chr1_1:18276901-18276920 | None:intergenic | 35.0% |
| ACCGCAAATTTCACTCTAAA+CGG | - | chr1_1:18277191-18277210 | Msa0012170:intron | 35.0% | |
| ! | TCCGTTTAGAGTGAAATTTG+CGG | + | chr1_1:18277195-18277214 | None:intergenic | 35.0% |
| !! | TGCTCAAGGAAGTACTTAAT+TGG | + | chr1_1:18277313-18277332 | None:intergenic | 35.0% |
| CAACAGAGATAGGTATAATG+GGG | + | chr1_1:18277366-18277385 | None:intergenic | 35.0% | |
| CTCAACAGAGATAGGTATAA+TGG | + | chr1_1:18277368-18277387 | None:intergenic | 35.0% | |
| CATTATACCTATCTCTGTTG+AGG | - | chr1_1:18277366-18277385 | Msa0012170:CDS | 35.0% | |
| ATGTTCTTACTCAATAGGAG+GGG | + | chr1_1:18277573-18277592 | None:intergenic | 35.0% | |
| CTATGTTCTTACTCAATAGG+AGG | + | chr1_1:18277575-18277594 | None:intergenic | 35.0% | |
| AAACTTATATCAGGCTTCCT+TGG | - | chr1_1:18277647-18277666 | Msa0012170:intron | 35.0% | |
| AACTTATATCAGGCTTCCTT+GGG | - | chr1_1:18277648-18277667 | Msa0012170:intron | 35.0% | |
| ! | AACTTTTACAAGCAATCCCA+AGG | + | chr1_1:18277667-18277686 | None:intergenic | 35.0% |
| ! | TTTTACAGTTGTACACGTGT+AGG | - | chr1_1:18277691-18277710 | Msa0012170:intron | 35.0% |
| TATCTGCTGCACAAGTAATT+TGG | - | chr1_1:18277882-18277901 | Msa0012170:intron | 35.0% | |
| ! | GTATACAGCACGAGAAATTT+TGG | - | chr1_1:18278187-18278206 | Msa0012170:intron | 35.0% |
| !! | TTTTGGAAAACCACGTCATT+TGG | - | chr1_1:18278051-18278070 | Msa0012170:intron | 35.0% |
| ACAGATAATACCAAATGACG+TGG | + | chr1_1:18278370-18278389 | None:intergenic | 35.0% | |
| GAGAAAGAATTTAACACAGG+AGG | + | chr1_1:18278632-18278651 | None:intergenic | 35.0% | |
| TCGGAGAAAGAATTTAACAC+AGG | + | chr1_1:18278635-18278654 | None:intergenic | 35.0% | |
| AATAACGAACTCTGCTATCT+TGG | + | chr1_1:18278658-18278677 | None:intergenic | 35.0% | |
| !! | GTGAATTGTGTTTTGTTGCT+AGG | - | chr1_1:18278772-18278791 | Msa0012170:intron | 35.0% |
| !! | AGGACTTTTAAAAGGCTTGT+TGG | + | chr1_1:18278940-18278959 | None:intergenic | 35.0% |
| ! | ACGCATGTAGGACTTTTAAA+AGG | + | chr1_1:18278948-18278967 | None:intergenic | 35.0% |
| TTTGATGTATGAACGCATGT+AGG | + | chr1_1:18278960-18278979 | None:intergenic | 35.0% | |
| !! | CAAAGAGACTTGTTGATATG+TGG | - | chr1_1:18279146-18279165 | Msa0012170:CDS | 35.0% |
| TATCAAGAAATGAAAGCAGG+GGG | + | chr1_1:18279203-18279222 | None:intergenic | 35.0% | |
| TAATCCATCCTACCAAAAAC+TGG | + | chr1_1:18279291-18279310 | None:intergenic | 35.0% | |
| TGTTCCAGATATTGATATGC+TGG | - | chr1_1:18279324-18279343 | Msa0012170:intron | 35.0% | |
| GTTCCAGATATTGATATGCT+GGG | - | chr1_1:18279325-18279344 | Msa0012170:intron | 35.0% | |
| AAACCCAGCATATCAATATC+TGG | + | chr1_1:18279331-18279350 | None:intergenic | 35.0% | |
| !! | CAGCAATTATCCACTTTTGT+AGG | - | chr1_1:18279675-18279694 | Msa0012170:intron | 35.0% |
| TTTGTAGGTTTCCCATGTTA+AGG | - | chr1_1:18279690-18279709 | Msa0012170:intron | 35.0% | |
| CTCTTGAAGTCTGTAGATTA+TGG | - | chr1_1:18279861-18279880 | Msa0012170:CDS | 35.0% | |
| GTTCTCCAGATGAATTTACT+AGG | - | chr1_1:18279916-18279935 | Msa0012170:intron | 35.0% | |
| TAGGTTAACAGCTATCACAT+GGG | - | chr1_1:18279935-18279954 | Msa0012170:intron | 35.0% | |
| AATGAGTTTGTCAAACTTGG+TGG | - | chr1_1:18280105-18280124 | Msa0012170:intron | 35.0% | |
| ATCAGATATGCAAGGCAAAA+TGG | + | chr1_1:18280169-18280188 | None:intergenic | 35.0% | |
| GAAGAGAAAATTAGAGTGGT+AGG | - | chr1_1:18280192-18280211 | Msa0012170:intron | 35.0% | |
| ! | AGTTTTCTAACCTGGGAAAA+AGG | - | chr1_1:18280453-18280472 | Msa0012170:intron | 35.0% |
| ! | TTCTCGCAATCATTTTACAG+TGG | + | chr1_1:18280547-18280566 | None:intergenic | 35.0% |
| CAATACGATGTCTGTTTAAC+AGG | + | chr1_1:18280702-18280721 | None:intergenic | 35.0% | |
| GTTAAACAGACATCGTATTG+AGG | - | chr1_1:18280702-18280721 | Msa0012170:intron | 35.0% | |
| AAAAGTGATTACTCCGTGAA+GGG | + | chr1_1:18281035-18281054 | None:intergenic | 35.0% | |
| AAAAAGTGATTACTCCGTGA+AGG | + | chr1_1:18281036-18281055 | None:intergenic | 35.0% | |
| TTGCAAGTCATTATCACCAA+TGG | + | chr1_1:18281079-18281098 | None:intergenic | 35.0% | |
| ACTTGCAACTGATTACTTGT+CGG | - | chr1_1:18281091-18281110 | Msa0012170:CDS | 35.0% | |
| ! | GGGTGTCAAATATGTCATTT+AGG | + | chr1_1:18281134-18281153 | None:intergenic | 35.0% |
| !! | ATCTGAAAGTGCTTTGAGTA+GGG | + | chr1_1:18281154-18281173 | None:intergenic | 35.0% |
| GGTTAAATTACCTCATCAGA+TGG | + | chr1_1:18281177-18281196 | None:intergenic | 35.0% | |
| !! | AGGGGATAAAAGAAGGTATT+AGG | + | chr1_1:18281198-18281217 | None:intergenic | 35.0% |
| ! | CAATACCGAATATGGTGTTT+TGG | - | chr1_1:18281387-18281406 | Msa0012170:intron | 35.0% |
| ACGTTCCAAAACACCATATT+CGG | + | chr1_1:18281395-18281414 | None:intergenic | 35.0% | |
| ! | TATTTCTGATCACAAGCCAT+AGG | - | chr1_1:18281441-18281460 | Msa0012170:intron | 35.0% |
| AGAAGTCATTCCTAATATGG+GGG | + | chr1_1:18281520-18281539 | None:intergenic | 35.0% | |
| ! | TCTTGATTACCATTAGTCTC+TGG | - | chr1_1:18281616-18281635 | Msa0012170:intron | 35.0% |
| AATATGCTGTGTTATGTGGA+TGG | - | chr1_1:18282193-18282212 | Msa0012170:CDS | 35.0% | |
| ! | TTCGATTAATGGGTAGGATT+TGG | - | chr1_1:18282230-18282249 | Msa0012170:intron | 35.0% |
| ! | CACAATCAGCTAACTTTTCA+AGG | - | chr1_1:18282273-18282292 | Msa0012170:intron | 35.0% |
| ! | TTCAAGGTTACTGTAGCTTT+TGG | - | chr1_1:18282289-18282308 | Msa0012170:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1_1:18282413-18282432 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1_1:18282425-18282444 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1_1:18282509-18282528 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1_1:18282512-18282531 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1_1:18282513-18282532 | Msa0012170:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr1_1:18282565-18282584 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr1_1:18282570-18282589 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1_1:18282590-18282609 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr1_1:18282642-18282661 | None:intergenic | 35.0% | |
| ATGAATCTACAGCATCCAAA+AGG | + | chr1_1:18282777-18282796 | None:intergenic | 35.0% | |
| AAATTGTACTTCGATGGAGT+TGG | - | chr1_1:18283172-18283191 | Msa0012170:intron | 35.0% | |
| ! | GCCCTTTCTTTAGATGTTTT+TGG | - | chr1_1:18283336-18283355 | Msa0012170:intron | 35.0% |
| CCCCAAAAACATCTAAAGAA+AGG | + | chr1_1:18283341-18283360 | None:intergenic | 35.0% | |
| TCGAACAATGAAGCAGTTAA+AGG | + | chr1_1:18283406-18283425 | None:intergenic | 35.0% | |
| GAAATTCAGACAATCCTATG+TGG | - | chr1_1:18283450-18283469 | Msa0012170:intron | 35.0% | |
| TGAATACTGTTTCACCACAT+AGG | + | chr1_1:18283467-18283486 | None:intergenic | 35.0% | |
| CAGAGACTTATAATTGCCAT+TGG | + | chr1_1:18283654-18283673 | None:intergenic | 35.0% | |
| TAAAGCTAAAGCTAGATCCA+CGG | + | chr1_1:18283805-18283824 | None:intergenic | 35.0% | |
| AGCGAATCAATTTATCCAGT+TGG | + | chr1_1:18283950-18283969 | None:intergenic | 35.0% | |
| CTTTGCTTATCTTAGATTGC+AGG | - | chr1_1:18283986-18284005 | Msa0012170:intron | 35.0% | |
| TCGATCCTGCAAGATATTTA+TGG | - | chr1_1:18284209-18284228 | Msa0012170:intron | 35.0% | |
| !! | TGGCTATTCAAAGCATTGTA+TGG | - | chr1_1:18284229-18284248 | Msa0012170:intron | 35.0% |
| !!! | TGGTGCGAGTTTTGAATTTA+CGG | - | chr1_1:18284444-18284463 | Msa0012170:intron | 35.0% |
| ! | AATTGGTAATAATCCCCAGA+AGG | + | chr1_1:18284598-18284617 | None:intergenic | 35.0% |
| CTTATCCACTTCATTACCAA+AGG | - | chr1_1:18284777-18284796 | Msa0012170:intron | 35.0% | |
| !! | ATAATGTAGTGGACAAACTG+AGG | + | chr1_1:18284810-18284829 | None:intergenic | 35.0% |
| !! | AGCAACCTTTGATAATGTAG+TGG | + | chr1_1:18284821-18284840 | None:intergenic | 35.0% |
| CTACATTATCAAAGGTTGCT+AGG | - | chr1_1:18284821-18284840 | Msa0012170:intron | 35.0% | |
| ! | TTAATTCATATGCACCGACA+GGG | + | chr1_1:18285055-18285074 | None:intergenic | 35.0% |
| ! | TTTAATTCATATGCACCGAC+AGG | + | chr1_1:18285056-18285075 | None:intergenic | 35.0% |
| ! | TTGTTTTCACTATATGCAGG+AGG | - | chr1_1:18285167-18285186 | Msa0012170:intron | 35.0% |
| ! | TCAATAGACTGAGTTTTCTG+TGG | + | chr1_1:18285210-18285229 | None:intergenic | 35.0% |
| GAATTTCTCCTTGATCTTGA+AGG | + | chr1_1:18285246-18285265 | None:intergenic | 35.0% | |
| TCAAGATCAAGGAGAAATTC+AGG | - | chr1_1:18285246-18285265 | Msa0012170:CDS | 35.0% | |
| CAAGATCAAGGAGAAATTCA+GGG | - | chr1_1:18285247-18285266 | Msa0012170:CDS | 35.0% | |
| CAGTGCATATGAACTTTGAA+TGG | - | chr1_1:18285319-18285338 | Msa0012170:five_prime_UTR | 35.0% | |
| GTGCATATGAACTTTGAATG+GGG | - | chr1_1:18285321-18285340 | Msa0012170:five_prime_UTR | 35.0% | |
| ATATGAACTTTGAATGGGGT+CGG | - | chr1_1:18285325-18285344 | Msa0012170:five_prime_UTR | 35.0% | |
| ! | TTTGGAATCAAGATGAAGCT+TGG | - | chr1_1:18285423-18285442 | Msa0012170:five_prime_UTR | 35.0% |
| TTGGAATCAAGATGAAGCTT+GGG | - | chr1_1:18285424-18285443 | Msa0012170:five_prime_UTR | 35.0% | |
| !! | GCATTATTTCTATCTTTCGG+AGG | + | chr1_1:18285598-18285617 | None:intergenic | 35.0% |
| ACTGTTGAGCTGGAAAAAAG+AGG | + | chr1_1:18275403-18275422 | None:intergenic | 40.0% | |
| ! | TTTCTGAGAAACTGTTGAGC+TGG | + | chr1_1:18275413-18275432 | None:intergenic | 40.0% |
| GACGGAATTGTTGTGGAATT+AGG | - | chr1_1:18275914-18275933 | Msa0012170:intron | 40.0% | |
| !! | TGTTGTGGAATTAGGTTGAG+GGG | - | chr1_1:18275922-18275941 | Msa0012170:intron | 40.0% |
| ! | TGTATTGGTATGATGAAGGG+AGG | - | chr1_1:18276320-18276339 | Msa0012170:CDS | 40.0% |
| ! | GTATTGGTATGATGAAGGGA+GGG | - | chr1_1:18276321-18276340 | Msa0012170:CDS | 40.0% |
| AGCTTCATTAGTCAACCCAA+CGG | + | chr1_1:18276369-18276388 | None:intergenic | 40.0% | |
| TATGCGTGCTTGTTTGTGAT+GGG | - | chr1_1:18276456-18276475 | Msa0012170:CDS | 40.0% | |
| ! | GTGATGGGATATGCTTCATA+TGG | - | chr1_1:18276471-18276490 | Msa0012170:CDS | 40.0% |
| !! | ATAGTGGACATTGGATCTTC+TGG | - | chr1_1:18276571-18276590 | Msa0012170:intron | 40.0% |
| ! | AGAATGCTATTTAAGCGCTC+AGG | + | chr1_1:18276664-18276683 | None:intergenic | 40.0% |
| CTGAACTTCAGCATTCAAGA+GGG | + | chr1_1:18276790-18276809 | None:intergenic | 40.0% | |
| TAGTTAGAGCCTATGATGCA+TGG | - | chr1_1:18276923-18276942 | Msa0012170:intron | 40.0% | |
| AGTTAGAGCCTATGATGCAT+GGG | - | chr1_1:18276924-18276943 | Msa0012170:intron | 40.0% | |
| TAAACGGAATGCGAGAGATA+AGG | - | chr1_1:18277207-18277226 | Msa0012170:intron | 40.0% | |
| TTTGTTCTACGCTGAAGCAT+GGG | + | chr1_1:18277289-18277308 | None:intergenic | 40.0% | |
| ATTTGTTCTACGCTGAAGCA+TGG | + | chr1_1:18277290-18277309 | None:intergenic | 40.0% | |
| ! | AGACAATGCAAAAGTGCAGT+TGG | + | chr1_1:18277822-18277841 | None:intergenic | 40.0% |
| AGCAGATAATGCTAATGACG+TGG | + | chr1_1:18277870-18277889 | None:intergenic | 40.0% | |
| ! | AGACAATGCAAAAGTGCAGT+TGG | + | chr1_1:18277822-18277841 | None:intergenic | 40.0% |
| TATTATTCTGGGTCAATGCG+TGG | - | chr1_1:18278120-18278139 | Msa0012170:intron | 40.0% | |
| ! | ACACAATGCAAAAGTGCAGT+TGG | + | chr1_1:18278169-18278188 | None:intergenic | 40.0% |
| CATTACTGTGCATCAATGTG+TGG | - | chr1_1:18278273-18278292 | Msa0012170:intron | 40.0% | |
| ! | AGACAATGCAAAAGTGCAGT+TGG | + | chr1_1:18277822-18277841 | None:intergenic | 40.0% |
| ! | TTTTGTTGCTAGGTTGTGAG+AGG | - | chr1_1:18278782-18278801 | Msa0012170:intron | 40.0% |
| ! | TGCATAAGGCATCAAAGATC+TGG | + | chr1_1:18278829-18278848 | None:intergenic | 40.0% |
| ATCTGCAGAAAGCTTGCATA+AGG | + | chr1_1:18278843-18278862 | None:intergenic | 40.0% | |
| ATGTGCAGCACTTTGTACAT+TGG | + | chr1_1:18278873-18278892 | None:intergenic | 40.0% | |
| !! | TAAAAGGCTTGTTGGAGTTC+AGG | + | chr1_1:18278932-18278951 | None:intergenic | 40.0% |
| ATCAAGAAATGAAAGCAGGG+GGG | + | chr1_1:18279202-18279221 | None:intergenic | 40.0% | |
| !! | GGTAGGATGGATTACTGTAT+TGG | - | chr1_1:18279297-18279316 | Msa0012170:intron | 40.0% |
| CACTCACCATCAAGAAAATC+AGG | + | chr1_1:18279358-18279377 | None:intergenic | 40.0% | |
| ! | TTTTTCCCCTGTTAACTCAC+TGG | - | chr1_1:18279638-18279657 | Msa0012170:intron | 40.0% |
| ! | TTTTCCCCTGTTAACTCACT+GGG | - | chr1_1:18279639-18279658 | Msa0012170:intron | 40.0% |
| ACATGGGAAACCTACAAAAG+TGG | + | chr1_1:18279688-18279707 | None:intergenic | 40.0% | |
| GTCTGTAGATTATGGTCGAA+TGG | - | chr1_1:18279869-18279888 | Msa0012170:CDS | 40.0% | |
| CTAGGTTAACAGCTATCACA+TGG | - | chr1_1:18279934-18279953 | Msa0012170:intron | 40.0% | |
| ! | ATCAGTGTTTTGCTTAGCGT+TGG | - | chr1_1:18280005-18280024 | Msa0012170:intron | 40.0% |
| CCAAGAATGTCAGCATAGTA+TGG | + | chr1_1:18280144-18280163 | None:intergenic | 40.0% | |
| CCATACTATGCTGACATTCT+TGG | - | chr1_1:18280141-18280160 | Msa0012170:intron | 40.0% | |
| !!! | TCCCATATTTTAGTGTTGCC+TGG | - | chr1_1:18280269-18280288 | Msa0012170:intron | 40.0% |
| GCCAGGCAACACTAAAATAT+GGG | + | chr1_1:18280273-18280292 | None:intergenic | 40.0% | |
| TGCCAGGCAACACTAAAATA+TGG | + | chr1_1:18280274-18280293 | None:intergenic | 40.0% | |
| GGCTTATTTGTAAGGTTGCT+CGG | - | chr1_1:18280343-18280362 | Msa0012170:CDS | 40.0% | |
| GCTTATTTGTAAGGTTGCTC+GGG | - | chr1_1:18280344-18280363 | Msa0012170:CDS | 40.0% | |
| ATCAAAAGCTTCAGCTGGAT+CGG | + | chr1_1:18280400-18280419 | None:intergenic | 40.0% | |
| AAAACTACACCTCCTTGCAA+TGG | + | chr1_1:18280439-18280458 | None:intergenic | 40.0% | |
| ! | GAGGTGTAGTTTTCTAACCT+GGG | - | chr1_1:18280446-18280465 | Msa0012170:intron | 40.0% |
| !!! | CTGTGTACTGATTTTGGGAA+TGG | - | chr1_1:18280606-18280625 | Msa0012170:CDS | 40.0% |
| !!! | GATTTTGGGAATGGTTTGCT+TGG | - | chr1_1:18280615-18280634 | Msa0012170:CDS | 40.0% |
| TTAGGCAACTCTCTAGTGAA+TGG | - | chr1_1:18280638-18280657 | Msa0012170:CDS | 40.0% | |
| TAGGCAACTCTCTAGTGAAT+GGG | - | chr1_1:18280639-18280658 | Msa0012170:CDS | 40.0% | |
| AGAGACAGTAGCGTCAAAAT+GGG | + | chr1_1:18280820-18280839 | None:intergenic | 40.0% | |
| AAGAGACAGTAGCGTCAAAA+TGG | + | chr1_1:18280821-18280840 | None:intergenic | 40.0% | |
| ACTGATTACTTGTCGGAAAC+AGG | - | chr1_1:18281098-18281117 | Msa0012170:CDS | 40.0% | |
| !! | GATCTGAAAGTGCTTTGAGT+AGG | + | chr1_1:18281155-18281174 | None:intergenic | 40.0% |
| ACTTTCAGATCCATCTGATG+AGG | - | chr1_1:18281164-18281183 | Msa0012170:CDS | 40.0% | |
| !!! | GAATATGGTGTTTTGGAACG+TGG | - | chr1_1:18281394-18281413 | Msa0012170:intron | 40.0% |
| ! | CTAGTCTGAAATTGTGCACA+AGG | + | chr1_1:18281867-18281886 | None:intergenic | 40.0% |
| !! | GTAAGCTGTTTTCCTTCATC+CGG | - | chr1_1:18281906-18281925 | Msa0012170:intron | 40.0% |
| GAATACATATGACCGGATGA+AGG | + | chr1_1:18281921-18281940 | None:intergenic | 40.0% | |
| ! | GCAGCTATTTGTTTAGCTCA+GGG | + | chr1_1:18282140-18282159 | None:intergenic | 40.0% |
| ! | TGCAGCTATTTGTTTAGCTC+AGG | + | chr1_1:18282141-18282160 | None:intergenic | 40.0% |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1_1:18282484-18282503 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr1_1:18282615-18282634 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr1_1:18282616-18282635 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr1_1:18282617-18282636 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr1_1:18282648-18282667 | None:intergenic | 40.0% | |
| TCTACAGCATCCAAAAGGTA+CGG | + | chr1_1:18282772-18282791 | None:intergenic | 40.0% | |
| GTACTAACGAAGAGATCGTT+TGG | + | chr1_1:18282931-18282950 | None:intergenic | 40.0% | |
| TCAATTGTTAAGTGCACACG+TGG | - | chr1_1:18282961-18282980 | Msa0012170:intron | 40.0% | |
| GTTGACCTAAAAATGCTGCA+TGG | - | chr1_1:18283248-18283267 | Msa0012170:intron | 40.0% | |
| TGATTATAGCCTACGATGGA+GGG | + | chr1_1:18283274-18283293 | None:intergenic | 40.0% | |
| TTGATTATAGCCTACGATGG+AGG | + | chr1_1:18283275-18283294 | None:intergenic | 40.0% | |
| ! | GCACAAAGCATTAACTTCTG+TGG | + | chr1_1:18283308-18283327 | None:intergenic | 40.0% |
| AAGTTAATGCTTTGTGCTCC+AGG | - | chr1_1:18283311-18283330 | Msa0012170:intron | 40.0% | |
| !!! | TGTTTTTGGGGTAACAGTTC+TGG | - | chr1_1:18283350-18283369 | Msa0012170:intron | 40.0% |
| !!! | GTTTTTGGGGTAACAGTTCT+GGG | - | chr1_1:18283351-18283370 | Msa0012170:intron | 40.0% |
| ! | AAGTGCTGTGATTCAATCTC+TGG | - | chr1_1:18283893-18283912 | Msa0012170:intron | 40.0% |
| !!! | TGTGAAGTTTTTGGTCCAAC+TGG | - | chr1_1:18283932-18283951 | Msa0012170:intron | 40.0% |
| !! | GGATAAATTGATTCGCTTGC+TGG | - | chr1_1:18283953-18283972 | Msa0012170:intron | 40.0% |
| CAACATCCTTTATTGGTAGG+AGG | - | chr1_1:18284333-18284352 | Msa0012170:intron | 40.0% | |
| TGAACGACGACGTATATACT+AGG | + | chr1_1:18284416-18284435 | None:intergenic | 40.0% | |
| GCACGATTGAAAGAATACGA+TGG | + | chr1_1:18284559-18284578 | None:intergenic | 40.0% | |
| AACTGAATAGAGAGCCTTCT+GGG | - | chr1_1:18284581-18284600 | Msa0012170:intron | 40.0% | |
| AGAAAATGCAGCAGCAACAT+CGG | - | chr1_1:18284722-18284741 | Msa0012170:intron | 40.0% | |
| !! | AGCAACCTTTGGTAATGAAG+TGG | + | chr1_1:18284785-18284804 | None:intergenic | 40.0% |
| CGATGATTGTGATTGACTGT+TGG | - | chr1_1:18285014-18285033 | Msa0012170:intron | 40.0% | |
| TTCTCCTTGATCTTGAAGGA+GGG | + | chr1_1:18285242-18285261 | None:intergenic | 40.0% | |
| TTTCTCCTTGATCTTGAAGG+AGG | + | chr1_1:18285243-18285262 | None:intergenic | 40.0% | |
| AGGTTGGGATGGTGAATATT+GGG | - | chr1_1:18285399-18285418 | Msa0012170:five_prime_UTR | 40.0% | |
| ! | GGATGGTGAATATTGGGTTT+TGG | - | chr1_1:18285405-18285424 | Msa0012170:five_prime_UTR | 40.0% |
| TGGAATCAAGATGAAGCTTG+GGG | - | chr1_1:18285425-18285444 | Msa0012170:five_prime_UTR | 40.0% | |
| ! | TTTCTATCTTTCGGAGGCAT+AGG | + | chr1_1:18285592-18285611 | None:intergenic | 40.0% |
| TGCGGATTTCGTTTCGAGAA+TGG | + | chr1_1:18275636-18275655 | None:intergenic | 45.0% | |
| CTGCTCGAAACGAAACATTG+CGG | + | chr1_1:18275654-18275673 | None:intergenic | 45.0% | |
| AAAGCTTATCGGCGAGGTTA+CGG | + | chr1_1:18275805-18275824 | None:intergenic | 45.0% | |
| TTTCGTAAAGCTTATCGGCG+AGG | + | chr1_1:18275811-18275830 | None:intergenic | 45.0% | |
| !! | ACCTTGCGATGATTTGCTTG+TGG | + | chr1_1:18276032-18276051 | None:intergenic | 45.0% |
| CTATGCGTGCTTGTTTGTGA+TGG | - | chr1_1:18276455-18276474 | Msa0012170:CDS | 45.0% | |
| CCTGAACTTCAGCATTCAAG+AGG | + | chr1_1:18276791-18276810 | None:intergenic | 45.0% | |
| CCTCTTGAATGCTGAAGTTC+AGG | - | chr1_1:18276788-18276807 | Msa0012170:CDS | 45.0% | |
| GACACATACCCATGCATCAT+AGG | + | chr1_1:18276935-18276954 | None:intergenic | 45.0% | |
| ATGATGCATGGGTATGTGTC+CGG | - | chr1_1:18276935-18276954 | Msa0012170:intron | 45.0% | |
| ATGTATCTTGTACCCCGTAC+CGG | + | chr1_1:18276957-18276976 | None:intergenic | 45.0% | |
| ATCTCACCCTCAACAGAGAT+AGG | + | chr1_1:18277376-18277395 | None:intergenic | 45.0% | |
| TCTGTTGAGGGTGAGATGAA+GGG | - | chr1_1:18277379-18277398 | Msa0012170:CDS | 45.0% | |
| CACATGTTGTCACGCACATA+TGG | + | chr1_1:18278511-18278530 | None:intergenic | 45.0% | |
| ACGAACTCTGCTATCTTGGT+CGG | + | chr1_1:18278654-18278673 | None:intergenic | 45.0% | |
| !! | TCTCTTAGATCGACTCGTGA+AGG | - | chr1_1:18278892-18278911 | Msa0012170:intron | 45.0% |
| TGACCGAAAGTGATCAGTTC+AGG | - | chr1_1:18279070-18279089 | Msa0012170:intron | 45.0% | |
| GCACCTGAACTGATCACTTT+CGG | + | chr1_1:18279076-18279095 | None:intergenic | 45.0% | |
| TTCATGCGCTCCCTCAATAA+TGG | + | chr1_1:18279247-18279266 | None:intergenic | 45.0% | |
| ! | TCCATATGTCCGCCAGTTTT+TGG | - | chr1_1:18279276-18279295 | Msa0012170:intron | 45.0% |
| ! | ACCAAAAACTGGCGGACATA+TGG | + | chr1_1:18279280-18279299 | None:intergenic | 45.0% |
| !!! | TATGTCCGCCAGTTTTTGGT+AGG | - | chr1_1:18279280-18279299 | Msa0012170:intron | 45.0% |
| TCCATCCTACCAAAAACTGG+CGG | + | chr1_1:18279288-18279307 | None:intergenic | 45.0% | |
| TTTCCCCTGTTAACTCACTG+GGG | - | chr1_1:18279640-18279659 | Msa0012170:intron | 45.0% | |
| TCTTCCCCAGTGAGTTAACA+GGG | + | chr1_1:18279647-18279666 | None:intergenic | 45.0% | |
| ATCTTCCCCAGTGAGTTAAC+AGG | + | chr1_1:18279648-18279667 | None:intergenic | 45.0% | |
| TGGTCGAATGGCTGAAATTC+TGG | - | chr1_1:18279881-18279900 | Msa0012170:CDS | 45.0% | |
| TGGCTGAAATTCTGGTACAG+AGG | - | chr1_1:18279889-18279908 | Msa0012170:CDS | 45.0% | |
| GGCTGAAATTCTGGTACAGA+GGG | - | chr1_1:18279890-18279909 | Msa0012170:CDS | 45.0% | |
| ACAGCTATCACATGGGTAAG+TGG | - | chr1_1:18279942-18279961 | Msa0012170:intron | 45.0% | |
| CAGCATAGTATGGAACAAGC+TGG | + | chr1_1:18280134-18280153 | None:intergenic | 45.0% | |
| TGTACTGAGTTGTACATGCC+AGG | + | chr1_1:18280290-18280309 | None:intergenic | 45.0% | |
| GATTGCTCGTAGCTCTTCAT+TGG | + | chr1_1:18280373-18280392 | None:intergenic | 45.0% | |
| CCTACATCAAAAGCTTCAGC+TGG | + | chr1_1:18280405-18280424 | None:intergenic | 45.0% | |
| ! | CCAGCTGAAGCTTTTGATGT+AGG | - | chr1_1:18280402-18280421 | Msa0012170:intron | 45.0% |
| !! | GGAGGTGTAGTTTTCTAACC+TGG | - | chr1_1:18280445-18280464 | Msa0012170:intron | 45.0% |
| TTCTAACCTGGGAAAAAGGC+TGG | - | chr1_1:18280457-18280476 | Msa0012170:intron | 45.0% | |
| TCTAACCTGGGAAAAAGGCT+GGG | - | chr1_1:18280458-18280477 | Msa0012170:intron | 45.0% | |
| TACAGTGGTGAGCAATAGTC+AGG | - | chr1_1:18280521-18280540 | Msa0012170:intron | 45.0% | |
| !! | TGGGAATGGTTTGCTTGGTT+AGG | - | chr1_1:18280620-18280639 | Msa0012170:CDS | 45.0% |
| CTCGAATCGAAGCTTTGCAT+TGG | - | chr1_1:18280668-18280687 | Msa0012170:intron | 45.0% | |
| CTATGAGATAGACATCGAGG+AGG | + | chr1_1:18280783-18280802 | None:intergenic | 45.0% | |
| GCTCTATGAGATAGACATCG+AGG | + | chr1_1:18280786-18280805 | None:intergenic | 45.0% | |
| GAGACAGTAGCGTCAAAATG+GGG | + | chr1_1:18280819-18280838 | None:intergenic | 45.0% | |
| !! | TTCATTGGCTCTTGGACTGA+CGG | + | chr1_1:18280895-18280914 | None:intergenic | 45.0% |
| GTCCAAGAGCCAATGAAACA+CGG | - | chr1_1:18280898-18280917 | Msa0012170:CDS | 45.0% | |
| TCCAAGAGCCAATGAAACAC+GGG | - | chr1_1:18280899-18280918 | Msa0012170:CDS | 45.0% | |
| ! | TTGAAGTGCCCGTGTTTCAT+TGG | + | chr1_1:18280910-18280929 | None:intergenic | 45.0% |
| TGTACTTGTCAAGCCCTTCA+CGG | - | chr1_1:18281019-18281038 | Msa0012170:intron | 45.0% | |
| CAAGGAAAACGACAAGATGC+CGG | + | chr1_1:18281849-18281868 | None:intergenic | 45.0% | |
| ! | CGGCATTCAAAAGCACACAA+AGG | + | chr1_1:18282028-18282047 | None:intergenic | 45.0% |
| AAGTTCACGGTAGACTCTCT+CGG | + | chr1_1:18282048-18282067 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr1_1:18282343-18282362 | Msa0012170:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1_1:18282490-18282509 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1_1:18282500-18282519 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr1_1:18282614-18282633 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1_1:18282695-18282714 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1_1:18282698-18282717 | Msa0012170:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr1_1:18282734-18282753 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr1_1:18282735-18282754 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr1_1:18282739-18282758 | Msa0012170:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr1_1:18282743-18282762 | None:intergenic | 45.0% | |
| GTGCAAGATTGCAATGCTCA+AGG | - | chr1_1:18283197-18283216 | Msa0012170:intron | 45.0% | |
| ! | ATGCTCAAGGCGCTATTTGA+TGG | - | chr1_1:18283210-18283229 | Msa0012170:intron | 45.0% |
| !! | TAACAGTTCTGGGACACCAT+TGG | - | chr1_1:18283361-18283380 | Msa0012170:intron | 45.0% |
| CAATCACTGGTAAATCCTGC+CGG | - | chr1_1:18283585-18283604 | Msa0012170:intron | 45.0% | |
| AATCACTGGTAAATCCTGCC+GGG | - | chr1_1:18283586-18283605 | Msa0012170:intron | 45.0% | |
| ATATACAAATCCTTCCCGGC+AGG | + | chr1_1:18283603-18283622 | None:intergenic | 45.0% | |
| CATTGGAGAATGACACCAAG+AGG | + | chr1_1:18283637-18283656 | None:intergenic | 45.0% | |
| !! | CTCTTGGTGTCATTCTCCAA+TGG | - | chr1_1:18283635-18283654 | Msa0012170:intron | 45.0% |
| AAGTCTCTGCTTTGTAGCTC+AGG | - | chr1_1:18283665-18283684 | Msa0012170:intron | 45.0% | |
| TGTGTGTCCAATTGCACAGT+GGG | + | chr1_1:18283753-18283772 | None:intergenic | 45.0% | |
| GAATCACAGCACTTGCATGT+CGG | + | chr1_1:18283887-18283906 | None:intergenic | 45.0% | |
| TGCTGTGATTCAATCTCTGG+AGG | - | chr1_1:18283896-18283915 | Msa0012170:intron | 45.0% | |
| ! | TGTGATTCAATCTCTGGAGG+AGG | - | chr1_1:18283899-18283918 | Msa0012170:intron | 45.0% |
| TCTTCTGATGTTGCTACCTC+AGG | - | chr1_1:18284252-18284271 | Msa0012170:intron | 45.0% | |
| CAACTGAATAGAGAGCCTTC+TGG | - | chr1_1:18284580-18284599 | Msa0012170:intron | 45.0% | |
| ACTGAATAGAGAGCCTTCTG+GGG | - | chr1_1:18284582-18284601 | Msa0012170:intron | 45.0% | |
| CAGGCATCTGAGGAAGAAAT+TGG | + | chr1_1:18284615-18284634 | None:intergenic | 45.0% | |
| TTTCTTCCTCAGATGCCTGA+TGG | - | chr1_1:18284616-18284635 | Msa0012170:intron | 45.0% | |
| TTTGTTCCATCAGGCATCTG+AGG | + | chr1_1:18284625-18284644 | None:intergenic | 45.0% | |
| GATGCCTGATGGAACAAAAG+AGG | - | chr1_1:18284627-18284646 | Msa0012170:intron | 45.0% | |
| ! | CCATCCTCTTTTGTTCCATC+AGG | + | chr1_1:18284634-18284653 | None:intergenic | 45.0% |
| CCTGATGGAACAAAAGAGGA+TGG | - | chr1_1:18284631-18284650 | Msa0012170:intron | 45.0% | |
| ! | GATGGTGATGCAACTGAAGA+TGG | - | chr1_1:18284649-18284668 | Msa0012170:CDS | 45.0% |
| GTGATGCAACTGAAGATGGT+GGG | - | chr1_1:18284653-18284672 | Msa0012170:CDS | 45.0% | |
| GAAAATGCAGCAGCAACATC+GGG | - | chr1_1:18284723-18284742 | Msa0012170:intron | 45.0% | |
| AAACTGAGGCTAGCAACCTT+TGG | + | chr1_1:18284796-18284815 | None:intergenic | 45.0% | |
| AGGCTCTTCATTCTGCTTGT+TGG | - | chr1_1:18284841-18284860 | Msa0012170:intron | 45.0% | |
| ATGTCCCTCCTTCAAGATCA+AGG | - | chr1_1:18285235-18285254 | Msa0012170:CDS | 45.0% | |
| GAGGTTGGGATGGTGAATAT+TGG | - | chr1_1:18285398-18285417 | Msa0012170:five_prime_UTR | 45.0% | |
| GGAATCAAGATGAAGCTTGG+GGG | - | chr1_1:18285426-18285445 | Msa0012170:five_prime_UTR | 45.0% | |
| ! | ATGAAGCTTGGGGGTTTTCT+GGG | - | chr1_1:18285435-18285454 | Msa0012170:five_prime_UTR | 45.0% |
| GAGCATCACGTTCTTCTACA+AGG | + | chr1_1:18285473-18285492 | None:intergenic | 45.0% | |
| !! | TGAAATCCTTGTGGGCTAGA+TGG | - | chr1_1:18285514-18285533 | Msa0012170:five_prime_UTR | 45.0% |
| !! | GAAATCCTTGTGGGCTAGAT+GGG | - | chr1_1:18285515-18285534 | Msa0012170:five_prime_UTR | 45.0% |
| AATATCCCATCTAGCCCACA+AGG | + | chr1_1:18285523-18285542 | None:intergenic | 45.0% | |
| !! | AAGATAATTAATAATAATTA+AGG | + | chr1_1:18275458-18275477 | None:intergenic | 5.0% |
| !! | ATAAAAATAAAAAAATATGT+AGG | + | chr1_1:18278598-18278617 | None:intergenic | 5.0% |
| !!! | ATTTGATTTAATAAAAAAAA+GGG | + | chr1_1:18281217-18281236 | None:intergenic | 5.0% |
| !!! | TATTTGATTTAATAAAAAAA+AGG | + | chr1_1:18281218-18281237 | None:intergenic | 5.0% |
| !!! | TAATGTTTTAAAAAATATTA+TGG | - | chr1_1:18282804-18282823 | Msa0012170:intron | 5.0% |
| CGCAATGTTTCGTTTCGAGC+AGG | - | chr1_1:18275652-18275671 | Msa0012170:three_prime_UTR | 50.0% | |
| ! | AGAGCATCCGCCATTGAAAC+AGG | + | chr1_1:18275758-18275777 | None:intergenic | 50.0% |
| ACGCAAAAATGCTGCACTCG+AGG | - | chr1_1:18275832-18275851 | Msa0012170:intron | 50.0% | |
| GCCACAAGCAAATCATCGCA+AGG | - | chr1_1:18276028-18276047 | Msa0012170:intron | 50.0% | |
| AGTTTAGCTGCTGCTACCGT+TGG | - | chr1_1:18276350-18276369 | Msa0012170:CDS | 50.0% | |
| GTTTAGCTGCTGCTACCGTT+GGG | - | chr1_1:18276351-18276370 | Msa0012170:CDS | 50.0% | |
| ! | CAGAGAGGGGTTGATTGCAA+AGG | + | chr1_1:18276843-18276862 | None:intergenic | 50.0% |
| GATAAGGAGTCCCACAGGTA+CGG | - | chr1_1:18277223-18277242 | Msa0012170:intron | 50.0% | |
| AGTATGCCTACCGTACCTGT+GGG | + | chr1_1:18277236-18277255 | None:intergenic | 50.0% | |
| ACAGGTACGGTAGGCATACT+CGG | - | chr1_1:18277236-18277255 | Msa0012170:intron | 50.0% | |
| TACGGTAGGCATACTCGGTA+CGG | - | chr1_1:18277241-18277260 | Msa0012170:intron | 50.0% | |
| ATCCCATACCAGTCGATGTG+AGG | - | chr1_1:18277332-18277351 | Msa0012170:intron | 50.0% | |
| ! | AGCCTCACATCGACTGGTAT+GGG | + | chr1_1:18277337-18277356 | None:intergenic | 50.0% |
| ! | AAGCCTCACATCGACTGGTA+TGG | + | chr1_1:18277338-18277357 | None:intergenic | 50.0% |
| TACCAGTCGATGTGAGGCTT+AGG | - | chr1_1:18277338-18277357 | Msa0012170:intron | 50.0% | |
| CTCTGTTGAGGGTGAGATGA+AGG | - | chr1_1:18277378-18277397 | Msa0012170:CDS | 50.0% | |
| !!! | TCCGCCAGTTTTTGGTAGGA+TGG | - | chr1_1:18279284-18279303 | Msa0012170:intron | 50.0% |
| CTTCCCCAGTGAGTTAACAG+GGG | + | chr1_1:18279646-18279665 | None:intergenic | 50.0% | |
| GAAATTCTGGTACAGAGGGC+TGG | - | chr1_1:18279894-18279913 | Msa0012170:CDS | 50.0% | |
| GAGCAATCCTCTCCATTGCA+AGG | - | chr1_1:18280424-18280443 | Msa0012170:intron | 50.0% | |
| CAATCCTCTCCATTGCAAGG+AGG | - | chr1_1:18280427-18280446 | Msa0012170:intron | 50.0% | |
| TACACCTCCTTGCAATGGAG+AGG | + | chr1_1:18280434-18280453 | None:intergenic | 50.0% | |
| ! | TCAAACCCAGCCTTTTTCCC+AGG | + | chr1_1:18280466-18280485 | None:intergenic | 50.0% |
| GCAACTCTCTAGTGAATGGG+AGG | - | chr1_1:18280642-18280661 | Msa0012170:CDS | 50.0% | |
| AATATGGGGGTGAGCCAATG+TGG | + | chr1_1:18281507-18281526 | None:intergenic | 50.0% | |
| !! | CATTGGCTCACCCCCATATT+AGG | - | chr1_1:18281507-18281526 | Msa0012170:CDS | 50.0% |
| CAAGAGATCCTCAGCACTTC+CGG | - | chr1_1:18281827-18281846 | Msa0012170:intron | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr1_1:18282342-18282361 | Msa0012170:CDS | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr1_1:18282344-18282363 | Msa0012170:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_1:18282348-18282367 | Msa0012170:CDS | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1_1:18282522-18282541 | Msa0012170:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr1_1:18282667-18282686 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1_1:18282687-18282706 | None:intergenic | 50.0% |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr1_1:18282748-18282767 | None:intergenic | 50.0% | |
| ! | CAAAAGGTACGGAGTCAGAC+CGG | + | chr1_1:18282761-18282780 | None:intergenic | 50.0% |
| ! | GAGGGCCATGCAGCATTTTT+AGG | + | chr1_1:18283256-18283275 | None:intergenic | 50.0% |
| CATCTAAAGAAAGGGCAGCC+TGG | + | chr1_1:18283332-18283351 | None:intergenic | 50.0% | |
| GTGTGTGTCCAATTGCACAG+TGG | + | chr1_1:18283754-18283773 | None:intergenic | 50.0% | |
| GCATGTCGGTAAGTCTGTAG+TGG | + | chr1_1:18283873-18283892 | None:intergenic | 50.0% | |
| ! | GATTCAATCTCTGGAGGAGG+AGG | - | chr1_1:18283902-18283921 | Msa0012170:intron | 50.0% |
| CGTCGTCGTTCAGAATCTAC+TGG | - | chr1_1:18284424-18284443 | Msa0012170:intron | 50.0% | |
| AAAGGCTGCACTTTGCTGCA+TGG | + | chr1_1:18284506-18284525 | None:intergenic | 50.0% | |
| GGTGATGCAACTGAAGATGG+TGG | - | chr1_1:18284652-18284671 | Msa0012170:CDS | 50.0% | |
| ! | TATGCAGGAGGCACAACAAG+AGG | - | chr1_1:18285179-18285198 | Msa0012170:intron | 50.0% |
| GAACTTTGAATGGGGTCGGT+CGG | - | chr1_1:18285329-18285348 | Msa0012170:five_prime_UTR | 50.0% | |
| AACTTTGAATGGGGTCGGTC+GGG | - | chr1_1:18285330-18285349 | Msa0012170:five_prime_UTR | 50.0% | |
| ! | GATGAAGCTTGGGGGTTTTC+TGG | - | chr1_1:18285434-18285453 | Msa0012170:five_prime_UTR | 50.0% |
| AGAAGAACGTGATGCTCACG+TGG | - | chr1_1:18285476-18285495 | Msa0012170:five_prime_UTR | 50.0% | |
| ! | CTATCTTTCGGAGGCATAGG+AGG | + | chr1_1:18285589-18285608 | None:intergenic | 50.0% |
| GGATGCTCTCACTGTCATGC+CGG | - | chr1_1:18275769-18275788 | Msa0012170:CDS | 55.0% | |
| ! | GTGAAGCAGCTTGCTTCTGC+CGG | - | chr1_1:18275948-18275967 | Msa0012170:intron | 55.0% |
| TGAAGCTGCTCAGCATCTCG+AGG | - | chr1_1:18276382-18276401 | Msa0012170:CDS | 55.0% | |
| TGCTCAGCATCTCGAGGTGA+GGG | - | chr1_1:18276388-18276407 | Msa0012170:CDS | 55.0% | |
| GCATGGGTATGTGTCCGGTA+CGG | - | chr1_1:18276940-18276959 | Msa0012170:intron | 55.0% | |
| CATGGGTATGTGTCCGGTAC+GGG | - | chr1_1:18276941-18276960 | Msa0012170:intron | 55.0% | |
| ATGGGTATGTGTCCGGTACG+GGG | - | chr1_1:18276942-18276961 | Msa0012170:intron | 55.0% | |
| CGAGAGATAAGGAGTCCCAC+AGG | - | chr1_1:18277218-18277237 | Msa0012170:intron | 55.0% | |
| GAGTATGCCTACCGTACCTG+TGG | + | chr1_1:18277237-18277256 | None:intergenic | 55.0% | |
| ACGGTAGGCATACTCGGTAC+GGG | - | chr1_1:18277242-18277261 | Msa0012170:intron | 55.0% | |
| CGACTGGTATGGGATGCTCA+AGG | + | chr1_1:18277327-18277346 | None:intergenic | 55.0% | |
| TGCCTAAGCCTCACATCGAC+TGG | + | chr1_1:18277343-18277362 | None:intergenic | 55.0% | |
| !! | GCCCGTGTTTCATTGGCTCT+TGG | + | chr1_1:18280903-18280922 | None:intergenic | 55.0% |
| !!! | GGTGTTTTGGAACGTGGAGC+AGG | - | chr1_1:18281400-18281419 | Msa0012170:intron | 55.0% |
| !! | ACAAGATGCCGGAAGTGCTG+AGG | + | chr1_1:18281838-18281857 | None:intergenic | 55.0% |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_1:18282350-18282369 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_1:18282356-18282375 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_1:18282357-18282376 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_1:18282356-18282375 | Msa0012170:CDS | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1_1:18282523-18282542 | Msa0012170:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr1_1:18282675-18282694 | None:intergenic | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr1_1:18282731-18282750 | None:intergenic | 55.0% |
| ! | CGGTCTGACTCCGTACCTTT+TGG | - | chr1_1:18282759-18282778 | Msa0012170:intron | 55.0% |
| ACTGGTAAATCCTGCCGGGA+AGG | - | chr1_1:18283590-18283609 | Msa0012170:intron | 55.0% | |
| TCTCCAGCCCACTGTGCAAT+TGG | - | chr1_1:18283743-18283762 | Msa0012170:intron | 55.0% | |
| TGTCCAATTGCACAGTGGGC+TGG | + | chr1_1:18283749-18283768 | None:intergenic | 55.0% | |
| ATCGGCGAGGTTACGGAGCA+CGG | + | chr1_1:18275798-18275817 | None:intergenic | 60.0% | |
| CTGCTCAGCATCTCGAGGTG+AGG | - | chr1_1:18276387-18276406 | Msa0012170:CDS | 60.0% | |
| AGGAGTCCCACAGGTACGGT+AGG | - | chr1_1:18277227-18277246 | Msa0012170:intron | 60.0% | |
| TGGAACGTGGAGCAGGTGAG+TGG | - | chr1_1:18281407-18281426 | Msa0012170:intron | 60.0% | |
| GTGGAGCAGGTGAGTGGCTT+GGG | - | chr1_1:18281413-18281432 | Msa0012170:intron | 60.0% | |
| CGTGGAGCAGGTGAGTGGCT+TGG | - | chr1_1:18281412-18281431 | Msa0012170:intron | 65.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr1_1:18282533-18282552 | None:intergenic | 65.0% | |
| GCTGCATGGCCCTCCATCGT+AGG | - | chr1_1:18283262-18283281 | Msa0012170:intron | 65.0% | |
| AGGTTACGGAGCACGGCGGC+CGG | + | chr1_1:18275791-18275810 | None:intergenic | 70.0% | |
| GGCGAGGTTACGGAGCACGG+CGG | + | chr1_1:18275795-18275814 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 18275393 | 18285642 | 18275393 | ID=Msa0012170;Name=Msa0012170 |
| chr1_1 | mRNA | 18275393 | 18285642 | 18275393 | ID=Msa0012170-mRNA-1;Parent=Msa0012170;Name=Msa0012170-mRNA-1;_AED=0.14;_eAED=0.14;_QI=371|0.89|0.9|1|1|1|20|358|734 |
| chr1_1 | exon | 18275393 | 18275849 | 18275393 | ID=Msa0012170-mRNA-1:exon:6705;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18276201 | 18276524 | 18276201 | ID=Msa0012170-mRNA-1:exon:6704;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18276762 | 18276830 | 18276762 | ID=Msa0012170-mRNA-1:exon:6703;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18277028 | 18277156 | 18277028 | ID=Msa0012170-mRNA-1:exon:6702;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18277349 | 18277510 | 18277349 | ID=Msa0012170-mRNA-1:exon:6701;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18278914 | 18279034 | 18278914 | ID=Msa0012170-mRNA-1:exon:6700;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18279130 | 18279245 | 18279130 | ID=Msa0012170-mRNA-1:exon:6699;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18279850 | 18279915 | 18279850 | ID=Msa0012170-mRNA-1:exon:6698;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18280312 | 18280393 | 18280312 | ID=Msa0012170-mRNA-1:exon:6697;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18280587 | 18280678 | 18280587 | ID=Msa0012170-mRNA-1:exon:6696;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18280826 | 18280933 | 18280826 | ID=Msa0012170-mRNA-1:exon:6695;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18281079 | 18281225 | 18281079 | ID=Msa0012170-mRNA-1:exon:6694;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18281483 | 18281577 | 18281483 | ID=Msa0012170-mRNA-1:exon:6693;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18281665 | 18281807 | 18281665 | ID=Msa0012170-mRNA-1:exon:6692;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18281944 | 18281972 | 18281944 | ID=Msa0012170-mRNA-1:exon:6691;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18282122 | 18282241 | 18282122 | ID=Msa0012170-mRNA-1:exon:6690;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18282326 | 18282415 | 18282326 | ID=Msa0012170-mRNA-1:exon:6689;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18284632 | 18284697 | 18284632 | ID=Msa0012170-mRNA-1:exon:6688;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18285043 | 18285099 | 18285043 | ID=Msa0012170-mRNA-1:exon:6687;Parent=Msa0012170-mRNA-1 |
| chr1_1 | exon | 18285182 | 18285642 | 18285182 | ID=Msa0012170-mRNA-1:exon:6686;Parent=Msa0012170-mRNA-1 |
| chr1_1 | five_prime_UTR | 18285272 | 18285642 | 18285272 | ID=Msa0012170-mRNA-1:five_prime_utr;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18285182 | 18285271 | 18285182 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18285043 | 18285099 | 18285043 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18284632 | 18284697 | 18284632 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18282326 | 18282415 | 18282326 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18282122 | 18282241 | 18282122 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18281944 | 18281972 | 18281944 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18281665 | 18281807 | 18281665 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18281483 | 18281577 | 18281483 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18281079 | 18281225 | 18281079 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18280826 | 18280933 | 18280826 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18280587 | 18280678 | 18280587 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18280312 | 18280393 | 18280312 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18279850 | 18279915 | 18279850 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18279130 | 18279245 | 18279130 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18278914 | 18279034 | 18278914 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18277349 | 18277510 | 18277349 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18277028 | 18277156 | 18277028 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18276762 | 18276830 | 18276762 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18276201 | 18276524 | 18276201 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | CDS | 18275751 | 18275849 | 18275751 | ID=Msa0012170-mRNA-1:cds;Parent=Msa0012170-mRNA-1 |
| chr1_1 | three_prime_UTR | 18275393 | 18275750 | 18275393 | ID=Msa0012170-mRNA-1:three_prime_utr;Parent=Msa0012170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
