Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015440 | sp|Q5XEP2|HSOP2_ARATH | 32.203 | 118 | 63 | 1 | 15 | 115 | 386 | 503 | 2.21e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015440 | Msa0164770 | 0.826785 | 2.241953e-54 | -8.615850e-47 |
| Msa0015440 | Msa0342850 | 0.801463 | 8.900023e-49 | -8.615850e-47 |
| Msa0015440 | Msa0485510 | 0.822402 | 2.414408e-53 | -8.615850e-47 |
| Msa0015440 | Msa0704980 | 0.805262 | 1.452957e-49 | -8.615850e-47 |
| Msa0015440 | Msa0930490 | 0.827014 | 1.976022e-54 | -8.615850e-47 |
| Msa0015440 | Msa1225720 | 0.818329 | 2.074528e-52 | -8.615850e-47 |
| Msa0015440 | Msa1258390 | 0.818596 | 1.804701e-52 | -8.615850e-47 |
| Msa0015440 | Msa1418690 | 0.801718 | 7.889369e-49 | -8.615850e-47 |
| Msa0015440 | Msa1418760 | 0.809684 | 1.675132e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015440 | MtrunA17_Chr1g0166441 | 92.593 | 324 | 7 | 1 | 1 | 307 | 1 | 324 | 0.0 | 609 |
| Msa0015440 | MtrunA17_Chr5g0398901 | 32.203 | 118 | 63 | 1 | 15 | 115 | 396 | 513 | 1.10e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015440 | AT1G04190.1 | 69.206 | 315 | 80 | 1 | 10 | 307 | 14 | 328 | 7.12e-164 | 459 |
| Msa0015440 | AT1G62740.1 | 32.203 | 118 | 63 | 1 | 15 | 115 | 386 | 503 | 2.25e-14 | 73.9 |
| Msa0015440 | AT1G12270.1 | 31.356 | 118 | 64 | 1 | 15 | 115 | 387 | 504 | 1.39e-13 | 71.6 |
| Msa0015440 | AT4G12400.1 | 30.508 | 118 | 65 | 1 | 15 | 115 | 373 | 490 | 1.78e-12 | 68.2 |
| Msa0015440 | AT4G12400.1 | 41.892 | 74 | 43 | 0 | 15 | 88 | 6 | 79 | 7.96e-11 | 63.2 |
| Msa0015440 | AT4G12400.2 | 30.508 | 118 | 65 | 1 | 15 | 115 | 373 | 490 | 1.94e-12 | 68.2 |
| Msa0015440 | AT4G12400.2 | 41.892 | 74 | 43 | 0 | 15 | 88 | 6 | 79 | 7.61e-11 | 63.2 |
| Msa0015440 | AT1G78120.1 | 33.898 | 118 | 66 | 3 | 13 | 118 | 161 | 278 | 1.92e-11 | 65.1 |
| Msa0015440 | AT1G78120.2 | 33.898 | 118 | 66 | 3 | 13 | 118 | 161 | 278 | 2.17e-11 | 64.7 |
| Msa0015440 | AT5G10090.1 | 27.193 | 114 | 65 | 2 | 15 | 110 | 475 | 588 | 4.27e-11 | 63.9 |
| Msa0015440 | AT5G65160.1 | 28.070 | 114 | 64 | 2 | 17 | 112 | 476 | 589 | 4.88e-11 | 63.9 |
| Msa0015440 | AT3G14950.1 | 41.975 | 81 | 44 | 1 | 14 | 91 | 261 | 341 | 8.01e-11 | 63.2 |
Find 66 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAGGGATCCAGAAATTT+TGG | 0.181636 | 1_1:+24977881 | Msa0015440:intron |
| TAATGTACTTGACTGATATT+TGG | 0.182612 | 1_1:+24977960 | Msa0015440:exon |
| AAACAGCTGCTGTGTGTTTC+TGG | 0.204324 | 1_1:-24976832 | None:intergenic |
| TGATTGCTCTTGATCTATTC+TGG | 0.226000 | 1_1:+24978154 | Msa0015440:three_prime_UTR |
| TTGTAGGGTTTACTAAGTTT+TGG | 0.235268 | 1_1:-24971192 | None:intergenic |
| GCGCCAACGTCCAAAATTTC+TGG | 0.288254 | 1_1:-24977891 | None:intergenic |
| GTGATTGATATTAAATCTTC+TGG | 0.293147 | 1_1:+24978261 | Msa0015440:three_prime_UTR |
| ACAATTGTACTAACCAATTC+AGG | 0.305169 | 1_1:-24974099 | None:intergenic |
| TTCAATACTTCTTGACTTTG+TGG | 0.320951 | 1_1:-24973970 | None:intergenic |
| ACCTTATCAATATTCACAAT+TGG | 0.335540 | 1_1:-24976604 | None:intergenic |
| AAATCTTCTGGTTAATTCTC+TGG | 0.350459 | 1_1:+24978273 | Msa0015440:three_prime_UTR |
| CCTTATCAATATTCACAATT+GGG | 0.352170 | 1_1:-24976603 | None:intergenic |
| GCTTCCATTTCCTTGATCCT+TGG | 0.353756 | 1_1:-24977643 | None:intergenic |
| GCTTGCTATCTTTCACTAGT+TGG | 0.356358 | 1_1:-24974011 | None:intergenic |
| TCAATACTTCTTGACTTTGT+GGG | 0.357106 | 1_1:-24973969 | None:intergenic |
| CTCTTGCAGTCTGAAAAGTA+TGG | 0.358770 | 1_1:+24976436 | Msa0015440:intron |
| AGTTTACTTTCTTCCTGATA+AGG | 0.380004 | 1_1:+24976555 | Msa0015440:CDS |
| CTCAAGAGCAGCCTGCTTAG+TGG | 0.383994 | 1_1:+24976888 | Msa0015440:CDS |
| AGATACACTGAAGCCTGAAT+TGG | 0.385448 | 1_1:+24974086 | Msa0015440:CDS |
| TCAGTCAAGTACATTAAGAT+TGG | 0.390706 | 1_1:-24977953 | None:intergenic |
| AGAAATTATCCAAGCTTTCA+AGG | 0.396625 | 1_1:+24978099 | Msa0015440:three_prime_UTR |
| TATTCCCAGTTCAAATGAAA+AGG | 0.399079 | 1_1:+24977727 | Msa0015440:CDS |
| TCTTGATCTATTCTGGAAAC+TGG | 0.399277 | 1_1:+24978161 | Msa0015440:three_prime_UTR |
| CTTCAGTGTATCTAAATGTT+TGG | 0.401626 | 1_1:-24974076 | None:intergenic |
| TGCTGCAGCATTGCTACAAT+TGG | 0.401785 | 1_1:+24973394 | Msa0015440:CDS |
| AAAGGTTAATGTTTGTGATT+CGG | 0.406969 | 1_1:-24971226 | None:intergenic |
| AACAGTGATAAACAAACTAA+TGG | 0.429194 | 1_1:-24978184 | None:intergenic |
| TCGGCATACTGCCTAAGAAA+TGG | 0.431760 | 1_1:-24976856 | None:intergenic |
| AATGCAACTCCTTGAAAGCT+TGG | 0.432933 | 1_1:-24978108 | None:intergenic |
| CTATACTCAAGCCATCAAAA+AGG | 0.441533 | 1_1:+24971377 | Msa0015440:CDS |
| AAGCTCTGAGATGTCTTTGA+AGG | 0.455578 | 1_1:+24971302 | Msa0015440:CDS |
| CCCAATTGTGAATATTGATA+AGG | 0.468621 | 1_1:+24976603 | Msa0015440:CDS |
| TTTGGAATGTAAAATAATGC+TGG | 0.470302 | 1_1:+24978043 | Msa0015440:three_prime_UTR |
| AATTAAATTAAAACCCGAAT+GGG | 0.475131 | 1_1:+24973454 | Msa0015440:CDS |
| ATTCCCAGTTCAAATGAAAA+GGG | 0.487057 | 1_1:+24977728 | Msa0015440:CDS |
| TCTGGAAAGGCCAAGGATCA+AGG | 0.487214 | 1_1:+24977633 | Msa0015440:CDS |
| CTCCTTCCGTGCGAAAATTG+TGG | 0.490264 | 1_1:+24977702 | Msa0015440:CDS |
| AAGGCCAAGGATCAAGGAAA+TGG | 0.491879 | 1_1:+24977639 | Msa0015440:CDS |
| AGTATGGATCTGAAGAAAGC+TGG | 0.495429 | 1_1:+24976452 | Msa0015440:CDS |
| GTGTGTTTCTGGTGACTCAA+AGG | 0.501172 | 1_1:-24976821 | None:intergenic |
| ATTAAAACCCGAATGGGAAA+AGG | 0.501785 | 1_1:+24973460 | Msa0015440:CDS |
| CAGTCAAGTACATTAAGATT+GGG | 0.505176 | 1_1:-24977952 | None:intergenic |
| GAGATGTCTTTGAAGGATCA+AGG | 0.536135 | 1_1:+24971309 | Msa0015440:CDS |
| TGGAAGCATGCACAGAATGA+TGG | 0.537108 | 1_1:+24977659 | Msa0015440:CDS |
| TGGAGACTGCTGTAAAATCA+TGG | 0.542267 | 1_1:+24976506 | Msa0015440:CDS |
| CTTATCAATATTCACAATTG+GGG | 0.543694 | 1_1:-24976602 | None:intergenic |
| AGCTATCTGAAAGGAAGCTA+AGG | 0.545730 | 1_1:-24973935 | None:intergenic |
| CTCATTCCTCGTCGAGACCA+TGG | 0.548485 | 1_1:+24976486 | Msa0015440:CDS |
| TAGTTTGTTTATCACTGTTG+AGG | 0.548826 | 1_1:+24978188 | Msa0015440:three_prime_UTR |
| TGTGTCTGCCAGGTCTGGAA+AGG | 0.560424 | 1_1:+24977620 | Msa0015440:intron |
| CCAAAGAGACAACAAAACAT+AGG | 0.562668 | 1_1:-24978025 | None:intergenic |
| AAACATCATTGCTTATCCAC+AGG | 0.566500 | 1_1:+24976918 | Msa0015440:CDS |
| TAGCAAGCGAGCTCAAGAAG+TGG | 0.567037 | 1_1:+24974026 | Msa0015440:CDS |
| TGCCAGGTCTGGAAAGGCCA+AGG | 0.570453 | 1_1:+24977626 | Msa0015440:intron |
| CAATTAAATTAAAACCCGAA+TGG | 0.579725 | 1_1:+24973453 | Msa0015440:CDS |
| AAACAAAGAAAGATCATCGA+TGG | 0.580639 | 1_1:+24971260 | Msa0015440:exon |
| AAAAGGGACAGATACTGTGC+AGG | 0.590409 | 1_1:+24977744 | Msa0015440:CDS |
| ATGGCATGAAACTTCTTCAG+TGG | 0.598632 | 1_1:+24976525 | Msa0015440:CDS |
| TGCTCTTGAGAAAGACTCCT+CGG | 0.607484 | 1_1:-24976875 | None:intergenic |
| GAGGCAAGTTTGTAGACAGT+AGG | 0.609601 | 1_1:+24978207 | Msa0015440:three_prime_UTR |
| TCAAGTACATTAAGATTGGG+AGG | 0.637826 | 1_1:-24977949 | None:intergenic |
| TATGAGATCGAATGTTGACA+TGG | 0.643506 | 1_1:+24974053 | Msa0015440:CDS |
| TTATCAATATTCACAATTGG+GGG | 0.644295 | 1_1:-24976601 | None:intergenic |
| ATACTGCGAAGCTATCTGAA+AGG | 0.645570 | 1_1:-24973944 | None:intergenic |
| ATTTCTTAGGCAGTATGCCG+AGG | 0.649476 | 1_1:+24976858 | Msa0015440:CDS |
| CAGTCTCCATGGTCTCGACG+AGG | 0.701435 | 1_1:-24976492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGAAAAATGTATTTTTAA+GGG | - | chr1_1:24973528-24973547 | None:intergenic | 10.0% |
| !!! | ATGATAAGATAATAATTTTT+CGG | + | chr1_1:24975612-24975631 | Msa0015440:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr1_1:24975661-24975680 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr1_1:24975662-24975681 | None:intergenic | 10.0% |
| !! | AATTAAAGATATGTATAAAT+AGG | + | chr1_1:24977034-24977053 | Msa0015440:intron | 10.0% |
| !!! | TTTGTTTTTTCTGTTTTTAA+AGG | - | chr1_1:24971247-24971266 | None:intergenic | 15.0% |
| !! | ATTTGAAAGAAAAAAGAAAA+GGG | - | chr1_1:24971435-24971454 | None:intergenic | 15.0% |
| !! | AATTTGAAAGAAAAAAGAAA+AGG | - | chr1_1:24971436-24971455 | None:intergenic | 15.0% |
| !!! | ATTTTGTAACTTTTTTCATT+TGG | + | chr1_1:24971453-24971472 | Msa0015440:intron | 15.0% |
| !!! | TTTTGTAACTTTTTTCATTT+GGG | + | chr1_1:24971454-24971473 | Msa0015440:intron | 15.0% |
| !!! | AAGTGTTTTTATTATAGTTT+CGG | + | chr1_1:24971628-24971647 | Msa0015440:intron | 15.0% |
| !! | ATTGACAATTATAATAATAG+TGG | - | chr1_1:24973238-24973257 | None:intergenic | 15.0% |
| !!! | CATTGAAAAATGTATTTTTA+AGG | - | chr1_1:24973529-24973548 | None:intergenic | 15.0% |
| !! | AAAAATTATTCAAAAACTAG+AGG | - | chr1_1:24974349-24974368 | None:intergenic | 15.0% |
| !!! | TTATTTTAGACTATTGAATA+GGG | - | chr1_1:24974417-24974436 | None:intergenic | 15.0% |
| !!! | TTTATTTTAGACTATTGAAT+AGG | - | chr1_1:24974418-24974437 | None:intergenic | 15.0% |
| !!! | TTCAATAGTCTAAAATAAAA+CGG | + | chr1_1:24974419-24974438 | Msa0015440:intron | 15.0% |
| !! | ATTAAAGAAATTAACATAGA+AGG | - | chr1_1:24974480-24974499 | None:intergenic | 15.0% |
| !! | TGGTAATCTTTATATAATTT+GGG | - | chr1_1:24974707-24974726 | None:intergenic | 15.0% |
| !! | TATTAGAATGTTTCTTTAAA+AGG | - | chr1_1:24974871-24974890 | None:intergenic | 15.0% |
| !! | AAATAAATTGTATTATAGTG+TGG | - | chr1_1:24974923-24974942 | None:intergenic | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr1_1:24975509-24975528 | Msa0015440:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr1_1:24975585-24975604 | None:intergenic | 15.0% |
| !!! | TGATAAGATAATAATTTTTC+GGG | + | chr1_1:24975613-24975632 | Msa0015440:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr1_1:24975947-24975966 | Msa0015440:intron | 15.0% |
| !! | AAGGAATTTGAAAAATTAAT+AGG | - | chr1_1:24976639-24976658 | None:intergenic | 15.0% |
| !!! | AAAAGAAAGTATAAATCAAA+AGG | - | chr1_1:24977190-24977209 | None:intergenic | 15.0% |
| !! | CGAATATTTATAAAAATGAT+AGG | + | chr1_1:24977983-24978002 | Msa0015440:three_prime_UTR | 15.0% |
| !!! | AAGTTAGAATTTGTAGATTT+TGG | + | chr1_1:24972235-24972254 | Msa0015440:intron | 20.0% |
| !!! | AGAAAATTCATTTTATGTAC+TGG | + | chr1_1:24972641-24972660 | Msa0015440:intron | 20.0% |
| !!! | GAAAATTCATTTTATGTACT+GGG | + | chr1_1:24972642-24972661 | Msa0015440:intron | 20.0% |
| !! | ATTTCCTTTACAAGTTATAT+AGG | + | chr1_1:24973100-24973119 | Msa0015440:intron | 20.0% |
| !!! | TATTTTTTTAGCAAATTGAG+TGG | + | chr1_1:24973260-24973279 | Msa0015440:intron | 20.0% |
| !! | GCATAAGATATTTATGAATT+GGG | - | chr1_1:24973335-24973354 | None:intergenic | 20.0% |
| !! | AGCATAAGATATTTATGAAT+TGG | - | chr1_1:24973336-24973355 | None:intergenic | 20.0% |
| !! | AATTAAATTAAAACCCGAAT+GGG | + | chr1_1:24973454-24973473 | Msa0015440:CDS | 20.0% |
| !! | TTTGTACTAAATACATATCT+CGG | - | chr1_1:24973748-24973767 | None:intergenic | 20.0% |
| !! | CAATAACTAAAAAATTTAGC+AGG | - | chr1_1:24973880-24973899 | None:intergenic | 20.0% |
| !! | ATATAGGATATGATATGTTT+AGG | - | chr1_1:24974625-24974644 | None:intergenic | 20.0% |
| !! | TATTTATTTGATACGAGTAT+CGG | - | chr1_1:24974683-24974702 | None:intergenic | 20.0% |
| !! | GTGGTAATCTTTATATAATT+TGG | - | chr1_1:24974708-24974727 | None:intergenic | 20.0% |
| !!! | AATCAATTTGGTTTTATACT+CGG | - | chr1_1:24974806-24974825 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr1_1:24975974-24975993 | None:intergenic | 20.0% |
| !! | ATATTGAAGAAGATAAAGAA+AGG | - | chr1_1:24976658-24976677 | None:intergenic | 20.0% |
| !! | TAAAATCATAATACCATACA+GGG | - | chr1_1:24976774-24976793 | None:intergenic | 20.0% |
| !! | TTAAAATCATAATACCATAC+AGG | - | chr1_1:24976775-24976794 | None:intergenic | 20.0% |
| !! | TCTTAGTTCATTAATTATGA+AGG | + | chr1_1:24976953-24976972 | Msa0015440:intron | 20.0% |
| !! | TTAGGGAAAATATTAGTTAA+TGG | + | chr1_1:24977008-24977027 | Msa0015440:intron | 20.0% |
| !! | TAGGGAAAATATTAGTTAAT+GGG | + | chr1_1:24977009-24977028 | Msa0015440:intron | 20.0% |
| !! | TAAAGATATGTATAAATAGG+AGG | + | chr1_1:24977037-24977056 | Msa0015440:intron | 20.0% |
| !!! | TGTATTTTGAATGGAAATAA+TGG | - | chr1_1:24977369-24977388 | None:intergenic | 20.0% |
| !!! | TTTTTTGGCAATTATTTTCA+TGG | + | chr1_1:24978129-24978148 | Msa0015440:three_prime_UTR | 20.0% |
| ! | AAAGGTTAATGTTTGTGATT+CGG | - | chr1_1:24971229-24971248 | None:intergenic | 25.0% |
| ! | AACTTATGAAAACAGCTTAT+AGG | + | chr1_1:24971796-24971815 | Msa0015440:intron | 25.0% |
| ! | CATTTATATGATAACCACTT+GGG | + | chr1_1:24971878-24971897 | Msa0015440:intron | 25.0% |
| ! | ATTTATATGATAACCACTTG+GGG | + | chr1_1:24971879-24971898 | Msa0015440:intron | 25.0% |
| !!! | TGTATGTTTGGTTTCAATTT+TGG | + | chr1_1:24972112-24972131 | Msa0015440:intron | 25.0% |
| ! | TGGATAAATTCATGTAAAAG+TGG | - | chr1_1:24972301-24972320 | None:intergenic | 25.0% |
| ! | AAGGTAAAGTGATTTATGAT+TGG | - | chr1_1:24972321-24972340 | None:intergenic | 25.0% |
| ! | TTATAGCATAAGTGAATGTT+TGG | - | chr1_1:24972414-24972433 | None:intergenic | 25.0% |
| !! | TAACTTGTAAAGGAAATGAA+AGG | - | chr1_1:24973097-24973116 | None:intergenic | 25.0% |
| ! | CAATTAAATTAAAACCCGAA+TGG | + | chr1_1:24973453-24973472 | Msa0015440:CDS | 25.0% |
| ! | TGATCAAAAGTTAAGAGAAA+AGG | - | chr1_1:24973653-24973672 | None:intergenic | 25.0% |
| ! | TCACAAAATTTCATATGTGT+CGG | - | chr1_1:24974210-24974229 | None:intergenic | 25.0% |
| !! | ATATGAAATTTTGTGAAGCA+CGG | + | chr1_1:24974214-24974233 | Msa0015440:intron | 25.0% |
| ! | TATTCAAAAACTAGAGGTTT+CGG | - | chr1_1:24974343-24974362 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAGACATTGAT+AGG | - | chr1_1:24974446-24974465 | None:intergenic | 25.0% |
| ! | CGTCATTTCTTAGAAAATAT+AGG | - | chr1_1:24974641-24974660 | None:intergenic | 25.0% |
| !!! | TTTTCTAAGAAATGACGTAT+CGG | + | chr1_1:24974644-24974663 | Msa0015440:intron | 25.0% |
| ! | ATATAAAGATTACCACTATG+TGG | + | chr1_1:24974712-24974731 | Msa0015440:intron | 25.0% |
| ! | TATAAAGATTACCACTATGT+GGG | + | chr1_1:24974713-24974732 | Msa0015440:intron | 25.0% |
| ! | AAAACTACGGATAATCAATT+TGG | - | chr1_1:24974818-24974837 | None:intergenic | 25.0% |
| !! | AAATTGATTATCCGTAGTTT+TGG | + | chr1_1:24974817-24974836 | Msa0015440:intron | 25.0% |
| ! | TGAAAAAGAAACCAAAACTA+CGG | - | chr1_1:24974831-24974850 | None:intergenic | 25.0% |
| ! | ATTGTATTATAGTGTGGATT+AGG | - | chr1_1:24974917-24974936 | None:intergenic | 25.0% |
| ! | TTACTCACTTAACAAAGTAA+CGG | + | chr1_1:24975192-24975211 | Msa0015440:intron | 25.0% |
| ! | CCAAGTACAAAATTCATAAA+AGG | - | chr1_1:24975336-24975355 | None:intergenic | 25.0% |
| !! | CCTTTTATGAATTTTGTACT+TGG | + | chr1_1:24975333-24975352 | Msa0015440:intron | 25.0% |
| ! | AATTACCAAACAAATAGCTT+AGG | + | chr1_1:24975432-24975451 | Msa0015440:intron | 25.0% |
| !! | GACTAATTTTCCTTTTTGTT+TGG | + | chr1_1:24975854-24975873 | Msa0015440:intron | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr1_1:24975969-24975988 | None:intergenic | 25.0% |
| !! | TAACTTTTGTGTGTGATTTT+TGG | - | chr1_1:24976030-24976049 | None:intergenic | 25.0% |
| ! | AGCATTAATTGTTGAATTTG+GGG | - | chr1_1:24976223-24976242 | None:intergenic | 25.0% |
| ! | GAGCATTAATTGTTGAATTT+GGG | - | chr1_1:24976224-24976243 | None:intergenic | 25.0% |
| !! | AGAGCATTAATTGTTGAATT+TGG | - | chr1_1:24976225-24976244 | None:intergenic | 25.0% |
| !!! | TTTCTGACATTTTGTTTTTC+AGG | - | chr1_1:24976267-24976286 | None:intergenic | 25.0% |
| !! | TCTCATTACTTTCTGTATTT+TGG | + | chr1_1:24976291-24976310 | Msa0015440:intron | 25.0% |
| ! | TTATCAATATTCACAATTGG+GGG | - | chr1_1:24976604-24976623 | None:intergenic | 25.0% |
| ! | CTTATCAATATTCACAATTG+GGG | - | chr1_1:24976605-24976624 | None:intergenic | 25.0% |
| ! | CCTTATCAATATTCACAATT+GGG | - | chr1_1:24976606-24976625 | None:intergenic | 25.0% |
| ! | ACCTTATCAATATTCACAAT+TGG | - | chr1_1:24976607-24976626 | None:intergenic | 25.0% |
| ! | TCTAAATATACTTGCACATT+TGG | + | chr1_1:24976698-24976717 | Msa0015440:intron | 25.0% |
| ! | CTAAATATACTTGCACATTT+GGG | + | chr1_1:24976699-24976718 | Msa0015440:intron | 25.0% |
| ! | TATAGGATAAAGAGTTAGTT+AGG | + | chr1_1:24976990-24977009 | Msa0015440:intron | 25.0% |
| ! | ATAGGATAAAGAGTTAGTTA+GGG | + | chr1_1:24976991-24977010 | Msa0015440:intron | 25.0% |
| !! | GATTTATACTTTCTTTTCCA+TGG | + | chr1_1:24977193-24977212 | Msa0015440:intron | 25.0% |
| ! | AAAAAATAGTGAGAATCAGA+GGG | - | chr1_1:24977255-24977274 | None:intergenic | 25.0% |
| ! | AAAAAAATAGTGAGAATCAG+AGG | - | chr1_1:24977256-24977275 | None:intergenic | 25.0% |
| ! | AGTAAATGGAGTATACAATT+TGG | - | chr1_1:24977298-24977317 | None:intergenic | 25.0% |
| ! | AAATAAGTGCATCCAAAAAA+GGG | - | chr1_1:24977781-24977800 | None:intergenic | 25.0% |
| ! | TAAATAAGTGCATCCAAAAA+AGG | - | chr1_1:24977782-24977801 | None:intergenic | 25.0% |
| ! | TAATGTACTTGACTGATATT+TGG | + | chr1_1:24977960-24977979 | Msa0015440:exon | 25.0% |
| !! | TTTGGAATGTAAAATAATGC+TGG | + | chr1_1:24978043-24978062 | Msa0015440:three_prime_UTR | 25.0% |
| ! | AACAGTGATAAACAAACTAA+TGG | - | chr1_1:24978187-24978206 | None:intergenic | 25.0% |
| ! | GTGATTGATATTAAATCTTC+TGG | + | chr1_1:24978261-24978280 | Msa0015440:three_prime_UTR | 25.0% |
| !!! | GTTTACTAAGTTTTGGGTAT+AGG | - | chr1_1:24971188-24971207 | None:intergenic | 30.0% |
| ! | TGTAGGGTTTACTAAGTTTT+GGG | - | chr1_1:24971194-24971213 | None:intergenic | 30.0% |
| ! | TTGTAGGGTTTACTAAGTTT+TGG | - | chr1_1:24971195-24971214 | None:intergenic | 30.0% |
| ! | TCGGTTACAAATGTTTTGTA+GGG | - | chr1_1:24971210-24971229 | None:intergenic | 30.0% |
| ! | TTCGGTTACAAATGTTTTGT+AGG | - | chr1_1:24971211-24971230 | None:intergenic | 30.0% |
| AAACAAAGAAAGATCATCGA+TGG | + | chr1_1:24971260-24971279 | Msa0015440:exon | 30.0% | |
| ! | TAAAAAGTGTGGGATTTGAA+GGG | - | chr1_1:24971404-24971423 | None:intergenic | 30.0% |
| ! | TTTTCACTTGATTCTGTTGT+TGG | + | chr1_1:24971483-24971502 | Msa0015440:intron | 30.0% |
| TTTCACTTGATTCTGTTGTT+GGG | + | chr1_1:24971484-24971503 | Msa0015440:intron | 30.0% | |
| AAGTTATCATGGATAGCTTA+TGG | - | chr1_1:24971781-24971800 | None:intergenic | 30.0% | |
| !! | GCTGTTTTCATAAGTTATCA+TGG | - | chr1_1:24971792-24971811 | None:intergenic | 30.0% |
| GCATTTATATGATAACCACT+TGG | + | chr1_1:24971877-24971896 | Msa0015440:intron | 30.0% | |
| TGTTATTCATAAGCTTGTCA+AGG | + | chr1_1:24971951-24971970 | Msa0015440:intron | 30.0% | |
| TGAAACCAAACATACACTAA+GGG | - | chr1_1:24972108-24972127 | None:intergenic | 30.0% | |
| TTGAAACCAAACATACACTA+AGG | - | chr1_1:24972109-24972128 | None:intergenic | 30.0% | |
| !! | ATGTTTGGTTTCAATTTTGG+TGG | + | chr1_1:24972115-24972134 | Msa0015440:intron | 30.0% |
| !! | TGTTTGGTTTCAATTTTGGT+GGG | + | chr1_1:24972116-24972135 | Msa0015440:intron | 30.0% |
| !! | AGAGTTGATTTTGACATGTT+TGG | + | chr1_1:24972162-24972181 | Msa0015440:intron | 30.0% |
| GGATTGAACAATAAAACTCA+AGG | - | chr1_1:24972280-24972299 | None:intergenic | 30.0% | |
| AAAATTGAGTCTGGCTAAAA+GGG | - | chr1_1:24972349-24972368 | None:intergenic | 30.0% | |
| TAAAATTGAGTCTGGCTAAA+AGG | - | chr1_1:24972350-24972369 | None:intergenic | 30.0% | |
| TGATCTTGTAAAATTGAGTC+TGG | - | chr1_1:24972358-24972377 | None:intergenic | 30.0% | |
| !!! | TAAGTGAATGTTTGGTTTTG+CGG | - | chr1_1:24972406-24972425 | None:intergenic | 30.0% |
| GCTTAATTAAGTAGGAAAAG+TGG | + | chr1_1:24972488-24972507 | Msa0015440:intron | 30.0% | |
| ACAAAATCTACTAATCTGCA+AGG | - | chr1_1:24972555-24972574 | None:intergenic | 30.0% | |
| GCTAGAAGCTAATTCAAAAT+AGG | - | chr1_1:24972580-24972599 | None:intergenic | 30.0% | |
| TGGATTGTGATGAAATATGA+CGG | + | chr1_1:24972713-24972732 | Msa0015440:intron | 30.0% | |
| AAAGTACAAGAAAAATAGCC+CGG | + | chr1_1:24972832-24972851 | Msa0015440:intron | 30.0% | |
| !!! | TGGCATTGTCATCTTATTTT+CGG | + | chr1_1:24972931-24972950 | Msa0015440:intron | 30.0% |
| TTCCATAAAAATCACTGTCA+CGG | + | chr1_1:24973021-24973040 | Msa0015440:intron | 30.0% | |
| ! | CACTCCTATATAACTTGTAA+AGG | - | chr1_1:24973107-24973126 | None:intergenic | 30.0% |
| GTGGTTAATCAATATTGACA+TGG | - | chr1_1:24973183-24973202 | None:intergenic | 30.0% | |
| AGTCAAATACAACATGAAAG+TGG | - | chr1_1:24973202-24973221 | None:intergenic | 30.0% | |
| TTTAGCAAATTGAGTGGTTT+CGG | + | chr1_1:24973266-24973285 | Msa0015440:intron | 30.0% | |
| TACATCATCATATCGTTTCA+TGG | - | chr1_1:24973606-24973625 | None:intergenic | 30.0% | |
| TGTCAAAATAGCGAATATAG+CGG | + | chr1_1:24973677-24973696 | Msa0015440:intron | 30.0% | |
| ACTATAGTGCTATAGAATAG+CGG | + | chr1_1:24973701-24973720 | Msa0015440:intron | 30.0% | |
| TTGCTTGTGTGAATATTTGT+AGG | + | chr1_1:24973912-24973931 | Msa0015440:intron | 30.0% | |
| TCAATACTTCTTGACTTTGT+GGG | - | chr1_1:24973972-24973991 | None:intergenic | 30.0% | |
| TTCAATACTTCTTGACTTTG+TGG | - | chr1_1:24973973-24973992 | None:intergenic | 30.0% | |
| CTTCAGTGTATCTAAATGTT+TGG | - | chr1_1:24974079-24974098 | None:intergenic | 30.0% | |
| ACAATTGTACTAACCAATTC+AGG | - | chr1_1:24974102-24974121 | None:intergenic | 30.0% | |
| ATTGGTTAGTACAATTGTTC+TGG | + | chr1_1:24974104-24974123 | Msa0015440:intron | 30.0% | |
| TATCAATAGAGTAGTTGAAG+AGG | - | chr1_1:24974382-24974401 | None:intergenic | 30.0% | |
| TTTATATGCATGTTCTTTGC+TGG | + | chr1_1:24974512-24974531 | Msa0015440:intron | 30.0% | |
| ! | TTCTTTAAAAGGTGATTGAG+CGG | - | chr1_1:24974860-24974879 | None:intergenic | 30.0% |
| !! | TTATAGTGTGGATTAGGAAT+TGG | - | chr1_1:24974911-24974930 | None:intergenic | 30.0% |
| TTTAACAACCCATGAAAGAA+TGG | - | chr1_1:24974954-24974973 | None:intergenic | 30.0% | |
| ! | GTCAATGTCTAGAATAATGT+TGG | + | chr1_1:24975101-24975120 | Msa0015440:intron | 30.0% |
| TAGCAAAAACACAAAAAGCA+AGG | + | chr1_1:24975129-24975148 | Msa0015440:intron | 30.0% | |
| ACAAAAAGCAAGGTTGTTTA+AGG | + | chr1_1:24975139-24975158 | Msa0015440:intron | 30.0% | |
| !!! | GGTTTTATTAAAAAGGTGCA+GGG | - | chr1_1:24975301-24975320 | None:intergenic | 30.0% |
| !!! | GGATACGGGTTTTATTAAAA+AGG | - | chr1_1:24975308-24975327 | None:intergenic | 30.0% |
| ! | TTTTAATAAAACCCGTATCC+CGG | + | chr1_1:24975308-24975327 | Msa0015440:intron | 30.0% |
| ACAAAATTCATAAAAGGAGC+CGG | - | chr1_1:24975330-24975349 | None:intergenic | 30.0% | |
| ! | GGTGCTTGATTTGAATTTAT+GGG | - | chr1_1:24975373-24975392 | None:intergenic | 30.0% |
| ! | AGGTGCTTGATTTGAATTTA+TGG | - | chr1_1:24975374-24975393 | None:intergenic | 30.0% |
| GCTTAGGAACTCTTAAAATA+AGG | + | chr1_1:24975448-24975467 | Msa0015440:intron | 30.0% | |
| TCTTAAAATAAGGTTCTGTC+TGG | + | chr1_1:24975458-24975477 | Msa0015440:intron | 30.0% | |
| CTTAAAATAAGGTTCTGTCT+GGG | + | chr1_1:24975459-24975478 | Msa0015440:intron | 30.0% | |
| TTAAAATAAGGTTCTGTCTG+GGG | + | chr1_1:24975460-24975479 | Msa0015440:intron | 30.0% | |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr1_1:24975634-24975653 | Msa0015440:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | - | chr1_1:24975643-24975662 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr1_1:24975736-24975755 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr1_1:24975867-24975886 | None:intergenic | 30.0% | |
| AATGCTCTTAATCTAATCCA+AGG | + | chr1_1:24976089-24976108 | Msa0015440:intron | 30.0% | |
| AACACATTCAAAACTGAACA+GGG | + | chr1_1:24976187-24976206 | Msa0015440:intron | 30.0% | |
| AATGATATGAGTAGACAGAT+AGG | - | chr1_1:24976381-24976400 | None:intergenic | 30.0% | |
| AGTTTACTTTCTTCCTGATA+AGG | + | chr1_1:24976555-24976574 | Msa0015440:CDS | 30.0% | |
| CCCAATTGTGAATATTGATA+AGG | + | chr1_1:24976603-24976622 | Msa0015440:CDS | 30.0% | |
| ! | TGGATAAGCAATGATGTTTT+TGG | - | chr1_1:24976917-24976936 | None:intergenic | 30.0% |
| AAGAAATCAAAAGTTACCTG+TGG | - | chr1_1:24976937-24976956 | None:intergenic | 30.0% | |
| ACTCCATTTACTTTGACAAA+TGG | + | chr1_1:24977306-24977325 | Msa0015440:intron | 30.0% | |
| TCTCCATTTGTCAAAGTAAA+TGG | - | chr1_1:24977312-24977331 | None:intergenic | 30.0% | |
| ATTTACTTTGACAAATGGAG+AGG | + | chr1_1:24977311-24977330 | Msa0015440:intron | 30.0% | |
| !! | CACAGAACTTGTATTTTGAA+TGG | - | chr1_1:24977378-24977397 | None:intergenic | 30.0% |
| TCAAAATACAAGTTCTGTGA+AGG | + | chr1_1:24977379-24977398 | Msa0015440:intron | 30.0% | |
| !!! | ATGTGCATGTCTTTTTTTAG+TGG | + | chr1_1:24977408-24977427 | Msa0015440:intron | 30.0% |
| !!! | TTTTTTAGTGGCTTGTCTTT+AGG | + | chr1_1:24977420-24977439 | Msa0015440:intron | 30.0% |
| !!! | TTGTCTTTAGGATTTTCGTT+AGG | + | chr1_1:24977432-24977451 | Msa0015440:intron | 30.0% |
| !!! | TGTCTTTAGGATTTTCGTTA+GGG | + | chr1_1:24977433-24977452 | Msa0015440:intron | 30.0% |
| AGGAACCAATAAGAATTGAT+CGG | - | chr1_1:24977471-24977490 | None:intergenic | 30.0% | |
| !! | AATTCTTATTGGTTCCTCTA+AGG | + | chr1_1:24977474-24977493 | Msa0015440:intron | 30.0% |
| ! | AATAAACCACAATTTTCGCA+CGG | - | chr1_1:24977711-24977730 | None:intergenic | 30.0% |
| TATTCCCAGTTCAAATGAAA+AGG | + | chr1_1:24977727-24977746 | Msa0015440:CDS | 30.0% | |
| ATTCCCAGTTCAAATGAAAA+GGG | + | chr1_1:24977728-24977747 | Msa0015440:CDS | 30.0% | |
| CAGTCAAGTACATTAAGATT+GGG | - | chr1_1:24977955-24977974 | None:intergenic | 30.0% | |
| TCAGTCAAGTACATTAAGAT+TGG | - | chr1_1:24977956-24977975 | None:intergenic | 30.0% | |
| AGAAATTATCCAAGCTTTCA+AGG | + | chr1_1:24978099-24978118 | Msa0015440:three_prime_UTR | 30.0% | |
| !!! | TTTCAAGGAGTTGCATTTTT+TGG | + | chr1_1:24978114-24978133 | Msa0015440:three_prime_UTR | 30.0% |
| !! | TAGTTTGTTTATCACTGTTG+AGG | + | chr1_1:24978188-24978207 | Msa0015440:three_prime_UTR | 30.0% |
| ! | GATGTTGTATCTGTATTTTG+TGG | + | chr1_1:24978234-24978253 | Msa0015440:three_prime_UTR | 30.0% |
| ! | AAATCTTCTGGTTAATTCTC+TGG | + | chr1_1:24978273-24978292 | Msa0015440:three_prime_UTR | 30.0% |
| CTATACTCAAGCCATCAAAA+AGG | + | chr1_1:24971377-24971396 | Msa0015440:CDS | 35.0% | |
| ! | ATTTGAAGGGTCCTTTTTGA+TGG | - | chr1_1:24971391-24971410 | None:intergenic | 35.0% |
| ! | CTAAAAAGTGTGGGATTTGA+AGG | - | chr1_1:24971405-24971424 | None:intergenic | 35.0% |
| !! | CTTCAAATCCCACACTTTTT+AGG | + | chr1_1:24971403-24971422 | Msa0015440:CDS | 35.0% |
| !!! | AAATCCCACACTTTTTAGGT+AGG | + | chr1_1:24971407-24971426 | Msa0015440:intron | 35.0% |
| ! | CATTGTGGTTTTCTTGATCT+GGG | + | chr1_1:24971536-24971555 | Msa0015440:intron | 35.0% |
| AGTCTCACAAGTGTTTATGT+CGG | - | chr1_1:24971694-24971713 | None:intergenic | 35.0% | |
| !! | GTTTGGTTTCAATTTTGGTG+GGG | + | chr1_1:24972117-24972136 | Msa0015440:intron | 35.0% |
| ! | GCTAAAGCGCTTAATTAAGT+AGG | + | chr1_1:24972480-24972499 | Msa0015440:intron | 35.0% |
| ! | AAGCTTGAATGCCGATTATT+GGG | + | chr1_1:24972682-24972701 | Msa0015440:intron | 35.0% |
| CCAGTATATTCCCCAATAAT+CGG | - | chr1_1:24972696-24972715 | None:intergenic | 35.0% | |
| ! | AGAGCTATTTGGTTTCGAAA+GGG | - | chr1_1:24972875-24972894 | None:intergenic | 35.0% |
| ! | AAGAGCTATTTGGTTTCGAA+AGG | - | chr1_1:24972876-24972895 | None:intergenic | 35.0% |
| ! | TTTGACTGAGTTGAGACTTA+CGG | + | chr1_1:24972977-24972996 | Msa0015440:intron | 35.0% |
| ! | TACCGTGACAGTGATTTTTA+TGG | - | chr1_1:24973026-24973045 | None:intergenic | 35.0% |
| TAGTAGAGAATCAGCATAAC+CGG | + | chr1_1:24973044-24973063 | Msa0015440:intron | 35.0% | |
| GGAATTCTCTCTTTAAACTC+CGG | - | chr1_1:24973066-24973085 | None:intergenic | 35.0% | |
| GGAGTTACGTATTTAAACTG+TGG | + | chr1_1:24973287-24973306 | Msa0015440:intron | 35.0% | |
| ATTAAAACCCGAATGGGAAA+AGG | + | chr1_1:24973460-24973479 | Msa0015440:CDS | 35.0% | |
| ! | AGATCTTACCTTTTCCCATT+CGG | - | chr1_1:24973471-24973490 | None:intergenic | 35.0% |
| TTCTGCTTGAATACATTTCC+AGG | + | chr1_1:24973550-24973569 | Msa0015440:intron | 35.0% | |
| TCTGCTTGAATACATTTCCA+GGG | + | chr1_1:24973551-24973570 | Msa0015440:intron | 35.0% | |
| !! | TTGACAACACTGCTTTTGAT+TGG | + | chr1_1:24973843-24973862 | Msa0015440:intron | 35.0% |
| !! | ACTGCTTTTGATTGGAAGTT+GGG | + | chr1_1:24973851-24973870 | Msa0015440:intron | 35.0% |
| TTCACACAAGCAAATGTATC+AGG | - | chr1_1:24973905-24973924 | None:intergenic | 35.0% | |
| TATGAGATCGAATGTTGACA+TGG | + | chr1_1:24974053-24974072 | Msa0015440:CDS | 35.0% | |
| ACGTATCATAACAGATACGT+TGG | + | chr1_1:24974281-24974300 | Msa0015440:intron | 35.0% | |
| CGTATCATAACAGATACGTT+GGG | + | chr1_1:24974282-24974301 | Msa0015440:intron | 35.0% | |
| AAACTCACATTGAAAGCTTC+CGG | + | chr1_1:24975010-24975029 | Msa0015440:intron | 35.0% | |
| ! | TGGCAAAAAGTAACCACTTT+TGG | + | chr1_1:24975045-24975064 | Msa0015440:intron | 35.0% |
| ! | GGGAGTTTAAAATCCAAAAG+TGG | - | chr1_1:24975061-24975080 | None:intergenic | 35.0% |
| ! | CTTTTGGATTTTAAACTCCC+CGG | + | chr1_1:24975061-24975080 | Msa0015440:intron | 35.0% |
| !!! | ACGTTGATTTTGATACTCTC+CGG | - | chr1_1:24975083-24975102 | None:intergenic | 35.0% |
| ! | ATTATGTGGCTTTTGTCAGA+GGG | + | chr1_1:24975243-24975262 | Msa0015440:intron | 35.0% |
| !!! | GGGTTTTATTAAAAAGGTGC+AGG | - | chr1_1:24975302-24975321 | None:intergenic | 35.0% |
| CAAAATTCATAAAAGGAGCC+GGG | - | chr1_1:24975329-24975348 | None:intergenic | 35.0% | |
| ! | GCTTGATTTGAATTTATGGG+AGG | - | chr1_1:24975370-24975389 | None:intergenic | 35.0% |
| ACTAGAGAACTCTTAAAGTG+AGG | - | chr1_1:24975394-24975413 | None:intergenic | 35.0% | |
| GAGTTCCTAAGCTATTTGTT+TGG | - | chr1_1:24975440-24975459 | None:intergenic | 35.0% | |
| TAAAATAAGGTTCTGTCTGG+GGG | + | chr1_1:24975461-24975480 | Msa0015440:intron | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr1_1:24975575-24975594 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | - | chr1_1:24975644-24975663 | None:intergenic | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr1_1:24975780-24975799 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCACA+AGG | + | chr1_1:24975802-24975821 | Msa0015440:intron | 35.0% | |
| CAACACATTCAAAACTGAAC+AGG | + | chr1_1:24976186-24976205 | Msa0015440:intron | 35.0% | |
| ! | TTTGGGATAATCTTTCTCGT+TGG | + | chr1_1:24976716-24976735 | Msa0015440:intron | 35.0% |
| !! | TAATCTTTCTCGTTGGCTTA+TGG | + | chr1_1:24976723-24976742 | Msa0015440:intron | 35.0% |
| ACTCAATAAAGTTCCCTGTA+TGG | + | chr1_1:24976758-24976777 | Msa0015440:intron | 35.0% | |
| AAACATCATTGCTTATCCAC+AGG | + | chr1_1:24976918-24976937 | Msa0015440:CDS | 35.0% | |
| ATTATGAAGGTGAGTCTGTT+AGG | + | chr1_1:24976966-24976985 | Msa0015440:intron | 35.0% | |
| CCTATATTGTCTTCTGTAGA+AGG | - | chr1_1:24977156-24977175 | None:intergenic | 35.0% | |
| CCTTCTACAGAAGACAATAT+AGG | + | chr1_1:24977153-24977172 | Msa0015440:intron | 35.0% | |
| AATCAGAGGGATAAAAGAGA+AGG | - | chr1_1:24977242-24977261 | None:intergenic | 35.0% | |
| TCCATCCGATCAATTCTTAT+TGG | + | chr1_1:24977463-24977482 | Msa0015440:intron | 35.0% | |
| ACCAATAAGAATTGATCGGA+TGG | - | chr1_1:24977467-24977486 | None:intergenic | 35.0% | |
| ! | TGTCCCTTTTCATTTGAACT+GGG | - | chr1_1:24977734-24977753 | None:intergenic | 35.0% |
| ! | TTGTATACCTTGCTATGTTC+AGG | + | chr1_1:24977865-24977884 | Msa0015440:intron | 35.0% |
| ! | TGTATACCTTGCTATGTTCA+GGG | + | chr1_1:24977866-24977885 | Msa0015440:intron | 35.0% |
| TCAAGTACATTAAGATTGGG+AGG | - | chr1_1:24977952-24977971 | None:intergenic | 35.0% | |
| CCAAAGAGACAACAAAACAT+AGG | - | chr1_1:24978028-24978047 | None:intergenic | 35.0% | |
| !! | CCTATGTTTTGTTGTCTCTT+TGG | + | chr1_1:24978025-24978044 | Msa0015440:three_prime_UTR | 35.0% |
| TGATTGCTCTTGATCTATTC+TGG | + | chr1_1:24978154-24978173 | Msa0015440:three_prime_UTR | 35.0% | |
| ! | TCTTGATCTATTCTGGAAAC+TGG | + | chr1_1:24978161-24978180 | Msa0015440:three_prime_UTR | 35.0% |
| !! | AAGCTCTGAGATGTCTTTGA+AGG | + | chr1_1:24971302-24971321 | Msa0015440:CDS | 40.0% |
| ! | GAGATGTCTTTGAAGGATCA+AGG | + | chr1_1:24971309-24971328 | Msa0015440:CDS | 40.0% |
| !!! | GGTAACGAGTTTTTCAAGTC+AGG | + | chr1_1:24971330-24971349 | Msa0015440:CDS | 40.0% |
| ! | GGTACCTACCTAAAAAGTGT+GGG | - | chr1_1:24971414-24971433 | None:intergenic | 40.0% |
| !! | GTTGTTTTGTCACTGCATTG+TGG | + | chr1_1:24971521-24971540 | Msa0015440:intron | 40.0% |
| ! | GCATTGTGGTTTTCTTGATC+TGG | + | chr1_1:24971535-24971554 | Msa0015440:intron | 40.0% |
| ! | ACATACACTAAGGGCATGTT+TGG | - | chr1_1:24972099-24972118 | None:intergenic | 40.0% |
| ACATGCCCTTAGTGTATGTT+TGG | + | chr1_1:24972100-24972119 | Msa0015440:intron | 40.0% | |
| AAGTGATCGAAGGCTCTATT+TGG | - | chr1_1:24972458-24972477 | None:intergenic | 40.0% | |
| GCTTTAGCATAAGTGATCGA+AGG | - | chr1_1:24972468-24972487 | None:intergenic | 40.0% | |
| ! | GAAGCTTGAATGCCGATTAT+TGG | + | chr1_1:24972681-24972700 | Msa0015440:intron | 40.0% |
| ! | AGCTTGAATGCCGATTATTG+GGG | + | chr1_1:24972683-24972702 | Msa0015440:intron | 40.0% |
| CCGATTATTGGGGAATATAC+TGG | + | chr1_1:24972693-24972712 | Msa0015440:intron | 40.0% | |
| TGTGATGAAATATGACGGTG+CGG | + | chr1_1:24972718-24972737 | Msa0015440:intron | 40.0% | |
| GACCCACATCGTTATTTACA+GGG | - | chr1_1:24972768-24972787 | None:intergenic | 40.0% | |
| TGACCCACATCGTTATTTAC+AGG | - | chr1_1:24972769-24972788 | None:intergenic | 40.0% | |
| CTGCAAAGCAAAGAGCTATT+TGG | - | chr1_1:24972886-24972905 | None:intergenic | 40.0% | |
| GATCTCCTACTGCTAAACAA+TGG | + | chr1_1:24972911-24972930 | Msa0015440:intron | 40.0% | |
| CAATGCCATTGTTTAGCAGT+AGG | - | chr1_1:24972919-24972938 | None:intergenic | 40.0% | |
| TCAACTCAGTCAAAGGCTTT+GGG | - | chr1_1:24972971-24972990 | None:intergenic | 40.0% | |
| GTAAGTCTCAACTCAGTCAA+AGG | - | chr1_1:24972978-24972997 | None:intergenic | 40.0% | |
| ! | GATCTTACCTTTTCCCATTC+GGG | - | chr1_1:24973470-24973489 | None:intergenic | 40.0% |
| TACATTTCCAGGGACATTTC+CGG | + | chr1_1:24973561-24973580 | Msa0015440:intron | 40.0% | |
| !! | CACTGCTTTTGATTGGAAGT+TGG | + | chr1_1:24973850-24973869 | Msa0015440:intron | 40.0% |
| AGCTATCTGAAAGGAAGCTA+AGG | - | chr1_1:24973938-24973957 | None:intergenic | 40.0% | |
| ATACTGCGAAGCTATCTGAA+AGG | - | chr1_1:24973947-24973966 | None:intergenic | 40.0% | |
| !! | GCTTGCTATCTTTCACTAGT+TGG | - | chr1_1:24974014-24974033 | None:intergenic | 40.0% |
| AGATACACTGAAGCCTGAAT+TGG | + | chr1_1:24974086-24974105 | Msa0015440:CDS | 40.0% | |
| CATGCTAGTTGAGCACTATT+AGG | - | chr1_1:24974137-24974156 | None:intergenic | 40.0% | |
| GATACTTACCAGACACGATA+CGG | - | chr1_1:24974257-24974276 | None:intergenic | 40.0% | |
| AGATTACCACTATGTGGGAT+TGG | + | chr1_1:24974718-24974737 | Msa0015440:intron | 40.0% | |
| ATCTAACCAATCCCACATAG+TGG | - | chr1_1:24974727-24974746 | None:intergenic | 40.0% | |
| !! | ACTATGTGGGATTGGTTAGA+TGG | + | chr1_1:24974726-24974745 | Msa0015440:intron | 40.0% |
| !! | CAACTTGTTGCTACGAATGA+TGG | - | chr1_1:24974767-24974786 | None:intergenic | 40.0% |
| TTTATACTCGGTAGATCACC+AGG | - | chr1_1:24974794-24974813 | None:intergenic | 40.0% | |
| !! | GTGTGGATTAGGAATTGGAA+TGG | - | chr1_1:24974906-24974925 | None:intergenic | 40.0% |
| ! | TTTTCTCCGCCATTCTTTCA+TGG | + | chr1_1:24974942-24974961 | Msa0015440:intron | 40.0% |
| TTTCTCCGCCATTCTTTCAT+GGG | + | chr1_1:24974943-24974962 | Msa0015440:intron | 40.0% | |
| AACAACCCATGAAAGAATGG+CGG | - | chr1_1:24974951-24974970 | None:intergenic | 40.0% | |
| AACTCACATTGAAAGCTTCC+GGG | + | chr1_1:24975011-24975030 | Msa0015440:intron | 40.0% | |
| !! | GTTGATTTTGATACTCTCCG+GGG | - | chr1_1:24975081-24975100 | None:intergenic | 40.0% |
| !!! | CGTTGATTTTGATACTCTCC+GGG | - | chr1_1:24975082-24975101 | None:intergenic | 40.0% |
| CACATAATGATTTGACGTGG+TGG | - | chr1_1:24975231-24975250 | None:intergenic | 40.0% | |
| CACCACGTCAAATCATTATG+TGG | + | chr1_1:24975229-24975248 | Msa0015440:intron | 40.0% | |
| AGCCACATAATGATTTGACG+TGG | - | chr1_1:24975234-24975253 | None:intergenic | 40.0% | |
| ! | CATTATGTGGCTTTTGTCAG+AGG | + | chr1_1:24975242-24975261 | Msa0015440:intron | 40.0% |
| AGAGTTCTCTAGTGAAGAGT+TGG | + | chr1_1:24975401-24975420 | Msa0015440:intron | 40.0% | |
| AAATTTGTCTAGTCCCGACT+TGG | + | chr1_1:24975558-24975577 | Msa0015440:intron | 40.0% | |
| AATTTGTCTAGTCCCGACTT+GGG | + | chr1_1:24975559-24975578 | Msa0015440:intron | 40.0% | |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr1_1:24975574-24975593 | None:intergenic | 40.0% |
| CGCTGCAACATAATTCTAAG+AGG | + | chr1_1:24975827-24975846 | Msa0015440:intron | 40.0% | |
| ! | CATACTTTTCAGACTGCAAG+AGG | - | chr1_1:24976438-24976457 | None:intergenic | 40.0% |
| CTCTTGCAGTCTGAAAAGTA+TGG | + | chr1_1:24976436-24976455 | Msa0015440:intron | 40.0% | |
| AGTATGGATCTGAAGAAAGC+TGG | + | chr1_1:24976452-24976471 | Msa0015440:CDS | 40.0% | |
| ! | TGATTTTACAGCAGTCTCCA+TGG | - | chr1_1:24976506-24976525 | None:intergenic | 40.0% |
| TGGAGACTGCTGTAAAATCA+TGG | + | chr1_1:24976506-24976525 | Msa0015440:CDS | 40.0% | |
| ATGGCATGAAACTTCTTCAG+TGG | + | chr1_1:24976525-24976544 | Msa0015440:CDS | 40.0% | |
| ! | TGTGTCTCATTCCATTTTCC+AGG | + | chr1_1:24976798-24976817 | Msa0015440:intron | 40.0% |
| !! | GCAGCTGTTTTCCATTTCTT+AGG | + | chr1_1:24976845-24976864 | Msa0015440:CDS | 40.0% |
| AGGTGAGTCTGTTAGGTTAT+AGG | + | chr1_1:24976973-24976992 | Msa0015440:intron | 40.0% | |
| AGTTATTCAGATTGTGCGAG+AGG | + | chr1_1:24977075-24977094 | Msa0015440:intron | 40.0% | |
| !! | CTTCTGTAGAAGGCACTATT+AGG | - | chr1_1:24977146-24977165 | None:intergenic | 40.0% |
| AAGCATAAAGCTAGCATCCA+TGG | - | chr1_1:24977213-24977232 | None:intergenic | 40.0% | |
| AGAGGGATAAAAGAGAAGGA+AGG | - | chr1_1:24977238-24977257 | None:intergenic | 40.0% | |
| GGATCTTTACTCTAGCTACA+TGG | + | chr1_1:24977332-24977351 | Msa0015440:intron | 40.0% | |
| TAAGGTTCTCTACTATGCCT+GGG | + | chr1_1:24977492-24977511 | Msa0015440:intron | 40.0% | |
| AAAAATACATGACCCATCCC+AGG | - | chr1_1:24977512-24977531 | None:intergenic | 40.0% | |
| ! | CTGTCCCTTTTCATTTGAAC+TGG | - | chr1_1:24977735-24977754 | None:intergenic | 40.0% |
| AAGTGCATCCAAAAAAGGGT+GGG | - | chr1_1:24977777-24977796 | None:intergenic | 40.0% | |
| TAAGTGCATCCAAAAAAGGG+TGG | - | chr1_1:24977778-24977797 | None:intergenic | 40.0% | |
| ! | GTTCAGGGATCCAGAAATTT+TGG | + | chr1_1:24977881-24977900 | Msa0015440:intron | 40.0% |
| ! | GATCCAGAAATTTTGGACGT+TGG | + | chr1_1:24977888-24977907 | Msa0015440:CDS | 40.0% |
| ! | GTCTTTTCTTTGAACAAGCG+AGG | - | chr1_1:24977930-24977949 | None:intergenic | 40.0% |
| AATGCAACTCCTTGAAAGCT+TGG | - | chr1_1:24978111-24978130 | None:intergenic | 40.0% | |
| GGGTACCTACCTAAAAAGTG+TGG | - | chr1_1:24971415-24971434 | None:intergenic | 45.0% | |
| ! | CACTAAGGGCATGTTTGGAT+TGG | - | chr1_1:24972094-24972113 | None:intergenic | 45.0% |
| TCTGGCTAAAAGGGAGTTGA+AGG | - | chr1_1:24972340-24972359 | None:intergenic | 45.0% | |
| TAGCCCCTAATCTAAGTGAC+TGG | + | chr1_1:24972742-24972761 | Msa0015440:intron | 45.0% | |
| AGGGCCAGTCACTTAGATTA+GGG | - | chr1_1:24972749-24972768 | None:intergenic | 45.0% | |
| TGGCCCTGTAAATAACGATG+TGG | + | chr1_1:24972762-24972781 | Msa0015440:intron | 45.0% | |
| GGCCCTGTAAATAACGATGT+GGG | + | chr1_1:24972763-24972782 | Msa0015440:intron | 45.0% | |
| ! | TGGTTTCGAAAGGGTGTACA+CGG | - | chr1_1:24972866-24972885 | None:intergenic | 45.0% |
| !! | CAGTCAAAGGCTTTGGGTTA+AGG | - | chr1_1:24972965-24972984 | None:intergenic | 45.0% |
| CTCAACTCAGTCAAAGGCTT+TGG | - | chr1_1:24972972-24972991 | None:intergenic | 45.0% | |
| !! | AGGAAATGAAAGGTACTCGC+TGG | - | chr1_1:24973087-24973106 | None:intergenic | 45.0% |
| TGCTGCAGCATTGCTACAAT+TGG | + | chr1_1:24973394-24973413 | Msa0015440:CDS | 45.0% | |
| TTTCCGGAAGGGATGCATAT+TGG | + | chr1_1:24973577-24973596 | Msa0015440:intron | 45.0% | |
| CAAAACAGAGCACAAGCCAT+TGG | - | chr1_1:24974313-24974332 | None:intergenic | 45.0% | |
| ! | TGTTGCTACGAATGATGGAG+CGG | - | chr1_1:24974762-24974781 | None:intergenic | 45.0% |
| !!! | GGTTACTTTTTGCCACCACT+TGG | - | chr1_1:24975040-24975059 | None:intergenic | 45.0% |
| GTTGTTTAAGGACATGCGAG+TGG | + | chr1_1:24975151-24975170 | Msa0015440:intron | 45.0% | |
| ACATGCGAGTGGCGTTAAAT+TGG | + | chr1_1:24975162-24975181 | Msa0015440:intron | 45.0% | |
| CATGCGAGTGGCGTTAAATT+GGG | + | chr1_1:24975163-24975182 | Msa0015440:intron | 45.0% | |
| TCATAAAAGGAGCCGGGATA+CGG | - | chr1_1:24975323-24975342 | None:intergenic | 45.0% | |
| CTAATCCAAGGTTCGACGAA+TGG | + | chr1_1:24976101-24976120 | Msa0015440:intron | 45.0% | |
| TAAGTCCATTCGTCGAACCT+TGG | - | chr1_1:24976109-24976128 | None:intergenic | 45.0% | |
| ! | GTCTGCGTCTTTTCCTTATC+AGG | - | chr1_1:24976571-24976590 | None:intergenic | 45.0% |
| TGACTCAAAGGCCTGGAAAA+TGG | - | chr1_1:24976812-24976831 | None:intergenic | 45.0% | |
| !! | GTGTGTTTCTGGTGACTCAA+AGG | - | chr1_1:24976824-24976843 | None:intergenic | 45.0% |
| AAACAGCTGCTGTGTGTTTC+TGG | - | chr1_1:24976835-24976854 | None:intergenic | 45.0% | |
| TCGGCATACTGCCTAAGAAA+TGG | - | chr1_1:24976859-24976878 | None:intergenic | 45.0% | |
| ATTTCTTAGGCAGTATGCCG+AGG | + | chr1_1:24976858-24976877 | Msa0015440:CDS | 45.0% | |
| TGCTCTTGAGAAAGACTCCT+CGG | - | chr1_1:24976878-24976897 | None:intergenic | 45.0% | |
| GGCATAGTAGAGAACCTTAG+AGG | - | chr1_1:24977491-24977510 | None:intergenic | 45.0% | |
| CTAAGGTTCTCTACTATGCC+TGG | + | chr1_1:24977491-24977510 | Msa0015440:intron | 45.0% | |
| TTCTCTACTATGCCTGGGAT+GGG | + | chr1_1:24977497-24977516 | Msa0015440:intron | 45.0% | |
| AACAACATTCTGTGTCTGCC+AGG | + | chr1_1:24977610-24977629 | Msa0015440:intron | 45.0% | |
| AAGGCCAAGGATCAAGGAAA+TGG | + | chr1_1:24977639-24977658 | Msa0015440:CDS | 45.0% | |
| GCTTCCATTTCCTTGATCCT+TGG | - | chr1_1:24977646-24977665 | None:intergenic | 45.0% | |
| ! | TGGAAGCATGCACAGAATGA+TGG | + | chr1_1:24977659-24977678 | Msa0015440:CDS | 45.0% |
| ! | AACCACAATTTTCGCACGGA+AGG | - | chr1_1:24977707-24977726 | None:intergenic | 45.0% |
| AAAAGGGACAGATACTGTGC+AGG | + | chr1_1:24977744-24977763 | Msa0015440:CDS | 45.0% | |
| !!! | GTTTCTCTCCCACCCTTTTT+TGG | + | chr1_1:24977766-24977785 | Msa0015440:intron | 45.0% |
| GAGGCAAGTTTGTAGACAGT+AGG | + | chr1_1:24978207-24978226 | Msa0015440:three_prime_UTR | 45.0% | |
| GGGCCAGTCACTTAGATTAG+GGG | - | chr1_1:24972748-24972767 | None:intergenic | 50.0% | |
| CAGGGCCAGTCACTTAGATT+AGG | - | chr1_1:24972750-24972769 | None:intergenic | 50.0% | |
| ! | GGTTTCGAAAGGGTGTACAC+GGG | - | chr1_1:24972865-24972884 | None:intergenic | 50.0% |
| CAATGCTGCAGCACGATTAC+TGG | - | chr1_1:24973387-24973406 | None:intergenic | 50.0% | |
| TTTCCAGGGACATTTCCGGA+AGG | + | chr1_1:24973565-24973584 | Msa0015440:intron | 50.0% | |
| TTCCAGGGACATTTCCGGAA+GGG | + | chr1_1:24973566-24973585 | Msa0015440:intron | 50.0% | |
| CCTCCAATATGCATCCCTTC+CGG | - | chr1_1:24973583-24973602 | None:intergenic | 50.0% | |
| TCAAATAGCGCGCTAGAGCA+CGG | + | chr1_1:24973774-24973793 | Msa0015440:intron | 50.0% | |
| TAGCAAGCGAGCTCAAGAAG+TGG | + | chr1_1:24974026-24974045 | Msa0015440:CDS | 50.0% | |
| ACACGATACGGCGAGGAAAT+TGG | - | chr1_1:24974245-24974264 | None:intergenic | 50.0% | |
| GATACGTTGGGATGCACCAA+TGG | + | chr1_1:24974294-24974313 | Msa0015440:intron | 50.0% | |
| ! | CGAATGATGGAGCGGTAAGA+AGG | - | chr1_1:24974754-24974773 | None:intergenic | 50.0% |
| GTAGCAACAAGTTGCTGTCC+TGG | + | chr1_1:24974773-24974792 | Msa0015440:intron | 50.0% | |
| TCACATTGAAAGCTTCCGGG+TGG | + | chr1_1:24975014-24975033 | Msa0015440:intron | 50.0% | |
| !! | GACGTGGTGGCTTTAGATTG+TGG | - | chr1_1:24975218-24975237 | None:intergenic | 50.0% |
| CATAAAAGGAGCCGGGATAC+GGG | - | chr1_1:24975322-24975341 | None:intergenic | 50.0% | |
| ! | TTTCTGGTGACTCAAAGGCC+TGG | - | chr1_1:24976819-24976838 | None:intergenic | 50.0% |
| !!! | GTTTTTGGCAGCCACTAAGC+AGG | - | chr1_1:24976902-24976921 | None:intergenic | 50.0% |
| GTTCTCTACTATGCCTGGGA+TGG | + | chr1_1:24977496-24977515 | Msa0015440:intron | 50.0% | |
| TCTGGAAAGGCCAAGGATCA+AGG | + | chr1_1:24977633-24977652 | Msa0015440:CDS | 50.0% | |
| CTCCTTCCGTGCGAAAATTG+TGG | + | chr1_1:24977702-24977721 | Msa0015440:CDS | 50.0% | |
| CTGGATCCCTGAACATAGCA+AGG | - | chr1_1:24977875-24977894 | None:intergenic | 50.0% | |
| GCGCCAACGTCCAAAATTTC+TGG | - | chr1_1:24977894-24977913 | None:intergenic | 50.0% | |
| ATCCCTTCCGGAAATGTCCC+TGG | - | chr1_1:24973571-24973590 | None:intergenic | 55.0% | |
| CCGGAAGGGATGCATATTGG+AGG | + | chr1_1:24973580-24973599 | Msa0015440:intron | 55.0% | |
| GCTAGAGCACGGTAGTGTAG+TGG | + | chr1_1:24973785-24973804 | Msa0015440:intron | 55.0% | |
| TTTCCTCGCCGTATCGTGTC+TGG | + | chr1_1:24974246-24974265 | Msa0015440:intron | 55.0% | |
| TTACCAGACACGATACGGCG+AGG | - | chr1_1:24974252-24974271 | None:intergenic | 55.0% | |
| CTCATTCCTCGTCGAGACCA+TGG | + | chr1_1:24976486-24976505 | Msa0015440:CDS | 55.0% | |
| CTCAAGAGCAGCCTGCTTAG+TGG | + | chr1_1:24976888-24976907 | Msa0015440:CDS | 55.0% | |
| CATTCTGTGTCTGCCAGGTC+TGG | + | chr1_1:24977615-24977634 | Msa0015440:intron | 55.0% | |
| TGTGTCTGCCAGGTCTGGAA+AGG | + | chr1_1:24977620-24977639 | Msa0015440:intron | 55.0% | |
| ! | ATCCTTGGCCTTTCCAGACC+TGG | - | chr1_1:24977631-24977650 | None:intergenic | 55.0% |
| CGATCGAAACGTGCCCCAAG+TGG | - | chr1_1:24971895-24971914 | None:intergenic | 60.0% | |
| GTGTACACGGGATACGCTCC+GGG | - | chr1_1:24972853-24972872 | None:intergenic | 60.0% | |
| GGTGTACACGGGATACGCTC+CGG | - | chr1_1:24972854-24972873 | None:intergenic | 60.0% | |
| AAAGCTTCCGGGTGGCCAAG+TGG | + | chr1_1:24975022-24975041 | Msa0015440:intron | 60.0% | |
| TTTGCCACCACTTGGCCACC+CGG | - | chr1_1:24975032-24975051 | None:intergenic | 60.0% | |
| CAGTCTCCATGGTCTCGACG+AGG | - | chr1_1:24976495-24976514 | None:intergenic | 60.0% | |
| TGCCAGGTCTGGAAAGGCCA+AGG | + | chr1_1:24977626-24977645 | Msa0015440:intron | 60.0% | |
| GCTTCCGGGTGGCCAAGTGG+TGG | + | chr1_1:24975025-24975044 | Msa0015440:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 24971156 | 24978300 | 24971156 | ID=Msa0015440;Name=Msa0015440 |
| chr1_1 | mRNA | 24971156 | 24978300 | 24971156 | ID=Msa0015440-mRNA-1;Parent=Msa0015440;Name=Msa0015440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=123|0.83|1|1|1|1|7|338|307 |
| chr1_1 | exon | 24971156 | 24971424 | 24971156 | ID=Msa0015440-mRNA-1:exon:8572;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24973388 | 24973481 | 24973388 | ID=Msa0015440-mRNA-1:exon:8573;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24973934 | 24974107 | 24973934 | ID=Msa0015440-mRNA-1:exon:8574;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24976445 | 24976624 | 24976445 | ID=Msa0015440-mRNA-1:exon:8575;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24976820 | 24976939 | 24976820 | ID=Msa0015440-mRNA-1:exon:8576;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24977632 | 24977765 | 24977632 | ID=Msa0015440-mRNA-1:exon:8577;Parent=Msa0015440-mRNA-1 |
| chr1_1 | exon | 24977887 | 24978300 | 24977887 | ID=Msa0015440-mRNA-1:exon:8578;Parent=Msa0015440-mRNA-1 |
| chr1_1 | five_prime_UTR | 24971156 | 24971278 | 24971156 | ID=Msa0015440-mRNA-1:five_prime_utr;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24971279 | 24971424 | 24971279 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24973388 | 24973481 | 24973388 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24973934 | 24974107 | 24973934 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24976445 | 24976624 | 24976445 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24976820 | 24976939 | 24976820 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24977632 | 24977765 | 24977632 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | CDS | 24977887 | 24977962 | 24977887 | ID=Msa0015440-mRNA-1:cds;Parent=Msa0015440-mRNA-1 |
| chr1_1 | three_prime_UTR | 24977963 | 24978300 | 24977963 | ID=Msa0015440-mRNA-1:three_prime_utr;Parent=Msa0015440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
