Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930490 | XP_003631000.1 | 88.599 | 307 | 3 | 1 | 1 | 275 | 1 | 307 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930490 | sp|Q9LHE5|TO401_ARATH | 66.774 | 310 | 66 | 5 | 1 | 274 | 1 | 309 | 5.17e-148 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000100 | Msa0930490 | 0.800510 | 1.393613e-48 | -8.615850e-47 |
| Msa0002750 | Msa0930490 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0002790 | Msa0930490 | 0.822838 | 1.911488e-53 | -8.615850e-47 |
| Msa0015440 | Msa0930490 | 0.827014 | 1.976022e-54 | -8.615850e-47 |
| Msa0022970 | Msa0930490 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0033130 | Msa0930490 | 0.800327 | 1.518052e-48 | -8.615850e-47 |
| Msa0044890 | Msa0930490 | 0.844406 | 7.708910e-59 | -8.615850e-47 |
| Msa0047650 | Msa0930490 | 0.833603 | 4.850392e-56 | -8.615850e-47 |
| Msa0068970 | Msa0930490 | 0.854447 | 1.223604e-61 | -8.615850e-47 |
| Msa0074030 | Msa0930490 | 0.808473 | 3.044083e-50 | -8.615850e-47 |
| Msa0079820 | Msa0930490 | 0.822859 | 1.890101e-53 | -8.615850e-47 |
| Msa0116670 | Msa0930490 | 0.823064 | 1.693668e-53 | -8.615850e-47 |
| Msa0608260 | Msa0930490 | 0.870346 | 1.563662e-66 | -8.615850e-47 |
| Msa0660850 | Msa0930490 | 0.859645 | 3.584260e-63 | -8.615850e-47 |
| Msa0691330 | Msa0930490 | 0.856475 | 3.138082e-62 | -8.615850e-47 |
| Msa0704980 | Msa0930490 | 0.816429 | 5.554642e-52 | -8.615850e-47 |
| Msa0709730 | Msa0930490 | 0.857031 | 2.152023e-62 | -8.615850e-47 |
| Msa0757940 | Msa0930490 | 0.855712 | 5.249852e-62 | -8.615850e-47 |
| Msa0799260 | Msa0930490 | 0.854786 | 9.760724e-62 | -8.615850e-47 |
| Msa0799310 | Msa0930490 | 0.860761 | 1.648935e-63 | -8.615850e-47 |
| Msa0837630 | Msa0930490 | 0.847049 | 1.478500e-59 | -8.615850e-47 |
| Msa0127390 | Msa0930490 | 0.821610 | 3.685421e-53 | -8.615850e-47 |
| Msa0133540 | Msa0930490 | 0.805798 | 1.121711e-49 | -8.615850e-47 |
| Msa0164770 | Msa0930490 | 0.831126 | 1.992340e-55 | -8.615850e-47 |
| Msa0173530 | Msa0930490 | 0.822092 | 2.850416e-53 | -8.615850e-47 |
| Msa0183090 | Msa0930490 | 0.809778 | 1.599217e-50 | -8.615850e-47 |
| Msa0236650 | Msa0930490 | 0.821177 | 4.637274e-53 | -8.615850e-47 |
| Msa0432850 | Msa0930490 | 0.804668 | 1.934676e-49 | -8.615850e-47 |
| Msa0289580 | Msa0930490 | 0.806803 | 6.888278e-50 | -8.615850e-47 |
| Msa0289610 | Msa0930490 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0327300 | Msa0930490 | 0.847096 | 1.435664e-59 | -8.615850e-47 |
| Msa0327330 | Msa0930490 | 0.803197 | 3.910046e-49 | -8.615850e-47 |
| Msa0342850 | Msa0930490 | 0.829779 | 4.251861e-55 | -8.615850e-47 |
| Msa0485510 | Msa0930490 | 0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa0486070 | Msa0930490 | 0.862715 | 4.163591e-64 | -8.615850e-47 |
| Msa0544720 | Msa0930490 | 0.860452 | 2.045214e-63 | -8.615850e-47 |
| Msa0554210 | Msa0930490 | 0.819891 | 9.152716e-53 | -8.615850e-47 |
| Msa0930490 | Msa0933300 | 0.806841 | 6.761009e-50 | -8.615850e-47 |
| Msa0930490 | Msa0979060 | 0.816372 | 5.720014e-52 | -8.615850e-47 |
| Msa0930490 | Msa1069760 | 0.808861 | 2.514732e-50 | -8.615850e-47 |
| Msa0930490 | Msa1088490 | 0.821618 | 3.668775e-53 | -8.615850e-47 |
| Msa0930490 | Msa1128120 | 0.822322 | 2.520238e-53 | -8.615850e-47 |
| Msa0930490 | Msa1157580 | 0.856567 | 2.948161e-62 | -8.615850e-47 |
| Msa0930490 | Msa1167540 | 0.827868 | 1.233712e-54 | -8.615850e-47 |
| Msa0930490 | Msa1167550 | 0.817012 | 4.111109e-52 | -8.615850e-47 |
| Msa0930490 | Msa1215820 | 0.818167 | 2.257838e-52 | -8.615850e-47 |
| Msa0930490 | Msa1225720 | 0.811813 | 5.801948e-51 | -8.615850e-47 |
| Msa0930490 | Msa1258390 | 0.802123 | 6.513733e-49 | -8.615850e-47 |
| Msa0930490 | Msa1260530 | 0.803590 | 3.241370e-49 | -8.615850e-47 |
| Msa0930490 | Msa1356400 | 0.820097 | 8.212871e-53 | -8.615850e-47 |
| Msa0930490 | Msa1366180 | 0.829026 | 6.479095e-55 | -8.615850e-47 |
| Msa0930490 | Msa1387410 | 0.802410 | 5.684849e-49 | -8.615850e-47 |
| Msa0930490 | Msa1418690 | 0.825778 | 3.894253e-54 | -8.615850e-47 |
| Msa0930490 | Msa1418760 | 0.934701 | 2.685524e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930490 | MtrunA17_Chr8g0392181 | 88.599 | 307 | 3 | 1 | 1 | 275 | 1 | 307 | 0.0 | 556 |
| Msa0930490 | MtrunA17_Chr8g0392211 | 73.944 | 142 | 30 | 3 | 4 | 142 | 1 | 138 | 7.71e-68 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0930490 | AT3G20000.1 | 66.774 | 310 | 66 | 5 | 1 | 274 | 1 | 309 | 5.25e-149 | 419 |
| Msa0930490 | AT1G50400.1 | 60.390 | 308 | 84 | 5 | 1 | 271 | 1 | 307 | 4.72e-126 | 361 |
| Msa0930490 | AT3G20000.2 | 66.387 | 238 | 46 | 3 | 70 | 274 | 2 | 238 | 1.03e-110 | 320 |
Find 88 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATACTTCAAAATTTATT+TGG | 0.092128 | 6_2:+79603246 | Msa0930490:three_prime_UTR |
| TGTGATTAAGAGAGAATTTC+TGG | 0.123252 | 6_2:-79597295 | None:intergenic |
| CGTTGGGTGGAGAGGTATTT+TGG | 0.132290 | 6_2:+79600298 | Msa0930490:CDS |
| GAATTTCTGGTTAAGCATTT+TGG | 0.195036 | 6_2:-79597282 | None:intergenic |
| CTTGATGTCCTTGAATAATT+TGG | 0.201334 | 6_2:+79603438 | Msa0930490:three_prime_UTR |
| TCGCTACAACACTGATAAAA+TGG | 0.287276 | 6_2:+79600359 | Msa0930490:CDS |
| AAAGACTACAAATTTGGATT+TGG | 0.302340 | 6_2:+79603034 | Msa0930490:CDS |
| ATCTCTAACAATGGCGACTA+TGG | 0.308328 | 6_2:+79597003 | Msa0930490:exon |
| AGAATTAATCAAGTTAATAA+AGG | 0.323136 | 6_2:+79603515 | Msa0930490:three_prime_UTR |
| GAAAACTTGCAAGGCTAGTC+TGG | 0.346012 | 6_2:-79603115 | None:intergenic |
| TTGGTCATTTGTTTATGATT+TGG | 0.357466 | 6_2:+79603457 | Msa0930490:three_prime_UTR |
| CCAACTGCTAACTATGAATT+CGG | 0.367648 | 6_2:+79597483 | Msa0930490:CDS |
| TTGTCGTCGGCGGTGGGAAT+CGG | 0.375328 | 6_2:-79597031 | None:intergenic |
| GCTAGGGGCAAGTTATATTC+AGG | 0.378150 | 6_2:+79598611 | Msa0930490:CDS |
| GACCTTCTTGTCGTCGGCGG+TGG | 0.385851 | 6_2:-79597038 | None:intergenic |
| TACAGAACACAGTTTCAAAT+GGG | 0.420179 | 6_2:+79598576 | Msa0930490:CDS |
| GTCACAAGCATAGCATACTT+TGG | 0.429505 | 6_2:+79596915 | Msa0930490:five_prime_UTR |
| GCTAGTCTGGCTAAAGGAAA+TGG | 0.433187 | 6_2:-79603102 | None:intergenic |
| TTACAGAACACAGTTTCAAA+TGG | 0.437411 | 6_2:+79598575 | Msa0930490:CDS |
| GTCATTTGTTTATGATTTGG+TGG | 0.437568 | 6_2:+79603460 | Msa0930490:three_prime_UTR |
| AGAGACGTCACTGCTAGCTT+TGG | 0.445106 | 6_2:+79601517 | Msa0930490:CDS |
| TTTGGATTTGGTTTGACCGT+TGG | 0.447555 | 6_2:+79603046 | Msa0930490:CDS |
| GTGACAAATCATTTATCGTT+GGG | 0.449646 | 6_2:+79600282 | Msa0930490:CDS |
| ATGGGGAATGGAGCCTTGCT+AGG | 0.464451 | 6_2:+79598594 | Msa0930490:CDS |
| ATGAAGTTCTTCGAAGGGAA+TGG | 0.465390 | 6_2:-79597095 | None:intergenic |
| AGTATTGTTGGGTCAATTTG+TGG | 0.466133 | 6_2:-79603231 | None:intergenic |
| GAACCAACGAAACAAACAAA+AGG | 0.468386 | 6_2:+79596942 | Msa0930490:five_prime_UTR |
| ACCTTCTTGTCGTCGGCGGT+GGG | 0.475541 | 6_2:-79597037 | None:intergenic |
| TCACAAGCATAGCATACTTT+GGG | 0.476778 | 6_2:+79596916 | Msa0930490:five_prime_UTR |
| ACAAATGACCAAATTATTCA+AGG | 0.477499 | 6_2:-79603446 | None:intergenic |
| CAAAAGAACCATTCCAGTGC+TGG | 0.487484 | 6_2:-79601353 | None:intergenic |
| TGAAGTTCTTCGAAGGGAAT+GGG | 0.496501 | 6_2:-79597094 | None:intergenic |
| ACAGGACAAGTTGCCAGCAC+TGG | 0.498458 | 6_2:+79601340 | Msa0930490:CDS |
| CTGATCGACCTTCTTGTCGT+CGG | 0.501398 | 6_2:-79597044 | None:intergenic |
| TGTGACAAATCATTTATCGT+TGG | 0.503304 | 6_2:+79600281 | Msa0930490:CDS |
| TGGGGAATGGAGCCTTGCTA+GGG | 0.504773 | 6_2:+79598595 | Msa0930490:CDS |
| TCATTTGTTTATGATTTGGT+GGG | 0.507943 | 6_2:+79603461 | Msa0930490:three_prime_UTR |
| GATGATTAACTTTGATTACA+AGG | 0.509596 | 6_2:+79598385 | Msa0930490:CDS |
| GCTGGTCAGCATCGAAAGTC+CGG | 0.511836 | 6_2:+79600321 | Msa0930490:CDS |
| CCGAATTCATAGTTAGCAGT+TGG | 0.512475 | 6_2:-79597483 | None:intergenic |
| GGGAATGGGACAAGGAAGGT+TGG | 0.514697 | 6_2:-79597080 | None:intergenic |
| ATCTGCATCCAGGTTGCCAC+AGG | 0.518788 | 6_2:+79601322 | Msa0930490:intron |
| TGGAATCAACCTTTCCCCTA+AGG | 0.518820 | 6_2:-79602779 | None:intergenic |
| ATAGTGCCGCCTTAGGGGAA+AGG | 0.523846 | 6_2:+79602770 | Msa0930490:intron |
| GAATTTCATTCTTTCTGCAG+AGG | 0.535381 | 6_2:+79602848 | Msa0930490:CDS |
| TTTGATACTCAGTGTTTCGA+TGG | 0.538232 | 6_2:+79597416 | Msa0930490:intron |
| GTTGGAGAATAAATTAGAGC+TGG | 0.541304 | 6_2:+79603064 | Msa0930490:exon |
| TGCAAGGCTAGTCTGGCTAA+AGG | 0.543465 | 6_2:-79603108 | None:intergenic |
| TGAAAAGAAGAAAACAAAGG+AGG | 0.545593 | 6_2:+79603172 | Msa0930490:three_prime_UTR |
| AGCTCTAATTTATTCTCCAA+CGG | 0.548927 | 6_2:-79603062 | None:intergenic |
| CTCTCTCTGATCTCTAACAA+TGG | 0.550157 | 6_2:+79596994 | Msa0930490:exon |
| TCATTTATCGTTGGGTGGAG+AGG | 0.555729 | 6_2:+79600290 | Msa0930490:CDS |
| TCGTCGGCGGTGGGAATCGG+TGG | 0.556917 | 6_2:-79597028 | None:intergenic |
| TTCGTAACTATATCTTCCGA+AGG | 0.557440 | 6_2:+79603539 | Msa0930490:three_prime_UTR |
| ACACAGTTTCAAATGGGGAA+TGG | 0.557932 | 6_2:+79598582 | Msa0930490:CDS |
| AAAAGCAGCACAAACACCAT+TGG | 0.560296 | 6_2:-79602799 | None:intergenic |
| AGGGGAAAGGTTGATTCCAA+TGG | 0.561118 | 6_2:+79602783 | Msa0930490:CDS |
| AACCAACGAAACAAACAAAA+GGG | 0.564293 | 6_2:+79596943 | Msa0930490:five_prime_UTR |
| TGTTCAGAAGGTTTCTGAGA+AGG | 0.565720 | 6_2:+79601381 | Msa0930490:CDS |
| TTGATACTCAGTGTTTCGAT+GGG | 0.565904 | 6_2:+79597417 | Msa0930490:intron |
| ATCATCCCTTGCGACATATG+TGG | 0.567411 | 6_2:-79598368 | None:intergenic |
| ACAAGTTGCCAGCACTGGAA+TGG | 0.569505 | 6_2:+79601345 | Msa0930490:CDS |
| TTTGGAGGAGAGGTTAAACA+TGG | 0.573440 | 6_2:+79602821 | Msa0930490:CDS |
| AGAAATTCTCTCTTAATCAC+AGG | 0.575821 | 6_2:+79597297 | Msa0930490:CDS |
| CAGCATCGAAAGTCCGGTGT+AGG | 0.581073 | 6_2:+79600327 | Msa0930490:CDS |
| TCCCACCGCCGACGACAAGA+AGG | 0.581867 | 6_2:+79597036 | Msa0930490:CDS |
| GAGGAATATATCATTTGTGT+CGG | 0.583957 | 6_2:+79603191 | Msa0930490:three_prime_UTR |
| TTCGCGATGAAGTTCTTCGA+AGG | 0.585780 | 6_2:-79597101 | None:intergenic |
| AATATAACTTGCCCCTAGCA+AGG | 0.586184 | 6_2:-79598607 | None:intergenic |
| TTATGACTACATTCTCAGAC+AGG | 0.586877 | 6_2:+79601540 | Msa0930490:CDS |
| GAACTTCATCGATCATCCTA+AGG | 0.592870 | 6_2:+79597509 | Msa0930490:CDS |
| CGAAGGGAATGGGACAAGGA+AGG | 0.594895 | 6_2:-79597084 | None:intergenic |
| TCGCGATGAAGTTCTTCGAA+GGG | 0.595915 | 6_2:-79597100 | None:intergenic |
| ATCGACCTTCTTGTCGTCGG+CGG | 0.596681 | 6_2:-79597041 | None:intergenic |
| ACAAATCATTTATCGTTGGG+TGG | 0.604461 | 6_2:+79600285 | Msa0930490:CDS |
| GATTCCTTCTCAGTCTGCTG+AGG | 0.606124 | 6_2:+79597449 | Msa0930490:CDS |
| TCTTCGAAGGGAATGGGACA+AGG | 0.607908 | 6_2:-79597088 | None:intergenic |
| AGTGAGCCACATATGTCGCA+AGG | 0.608954 | 6_2:+79598362 | Msa0930490:CDS |
| ATAACCTCAGCAGACTGAGA+AGG | 0.616639 | 6_2:-79597453 | None:intergenic |
| AGTGCTGGCAACTTGTCCTG+TGG | 0.616700 | 6_2:-79601338 | None:intergenic |
| AAGAAGCAAGAAAACTTGCA+AGG | 0.620169 | 6_2:-79603124 | None:intergenic |
| GTGAGCCACATATGTCGCAA+GGG | 0.643410 | 6_2:+79598363 | Msa0930490:CDS |
| AATCAACCTTTCCCCTAAGG+CGG | 0.646753 | 6_2:-79602776 | None:intergenic |
| GACTGAGAAGGAATCTCAGT+AGG | 0.652570 | 6_2:-79597441 | None:intergenic |
| GGGGAATGGAGCCTTGCTAG+GGG | 0.654668 | 6_2:+79598596 | Msa0930490:CDS |
| ACAGAACACAGTTTCAAATG+GGG | 0.668900 | 6_2:+79598577 | Msa0930490:CDS |
| TTGGAGGAGAGGTTAAACAT+GGG | 0.679861 | 6_2:+79602822 | Msa0930490:CDS |
| GCGAGCAGCATAACCTACAC+CGG | 0.690277 | 6_2:-79600340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGATGAAA+AGG | - | chr6_2:79597543-79597562 | None:intergenic | 10.0% |
| !! | ATAAAATCTAAAAGATATAT+TGG | - | chr6_2:79598103-79598122 | None:intergenic | 10.0% |
| !!! | TGATTATTTTAATTAGTATT+AGG | + | chr6_2:79598752-79598771 | Msa0930490:intron | 10.0% |
| !! | AAACAAATATTATTATATCA+AGG | + | chr6_2:79599094-79599113 | Msa0930490:intron | 10.0% |
| !! | AACAAATATTATTATATCAA+GGG | + | chr6_2:79599095-79599114 | Msa0930490:intron | 10.0% |
| !! | TCTCATATATTAATATAAAA+GGG | - | chr6_2:79599281-79599300 | None:intergenic | 10.0% |
| !! | TTCTCATATATTAATATAAA+AGG | - | chr6_2:79599282-79599301 | None:intergenic | 10.0% |
| !!! | TTTTTTGTTACAAAAATTTA+GGG | - | chr6_2:79599767-79599786 | None:intergenic | 10.0% |
| !!! | TTGAAATATTTAATTTCATT+TGG | + | chr6_2:79599856-79599875 | Msa0930490:intron | 10.0% |
| !!! | CCAATTAAAAATTTTAAAAT+AGG | - | chr6_2:79602445-79602464 | None:intergenic | 10.0% |
| !!! | CCTATTTTAAAATTTTTAAT+TGG | + | chr6_2:79602442-79602461 | Msa0930490:intron | 10.0% |
| !!! | CAAATAATACTTTAAGAAAA+TGG | + | chr6_2:79597616-79597635 | Msa0930490:intron | 15.0% |
| !! | AGAAGAAGAAAAAATAAATA+TGG | - | chr6_2:79598659-79598678 | None:intergenic | 15.0% |
| !!! | TTATTTTTTCTTCTTCTTTA+AGG | + | chr6_2:79598662-79598681 | Msa0930490:intron | 15.0% |
| !!! | TATTTTTTCTTCTTCTTTAA+GGG | + | chr6_2:79598663-79598682 | Msa0930490:intron | 15.0% |
| !!! | TTTTTTTATTTTTGAGTGTA+CGG | + | chr6_2:79598911-79598930 | Msa0930490:intron | 15.0% |
| !! | ACAAATATTATTATATCAAG+GGG | + | chr6_2:79599096-79599115 | Msa0930490:intron | 15.0% |
| !! | CTCATATATTAATATAAAAG+GGG | - | chr6_2:79599280-79599299 | None:intergenic | 15.0% |
| !!! | AGATAGAAATTTTTCAATAA+TGG | + | chr6_2:79599425-79599444 | Msa0930490:intron | 15.0% |
| !!! | CTTTTTTGTTACAAAAATTT+AGG | - | chr6_2:79599768-79599787 | None:intergenic | 15.0% |
| !! | TTATTAATATGAATAACTGA+TGG | + | chr6_2:79599945-79599964 | Msa0930490:intron | 15.0% |
| !! | TACATGAATATGAAATAATA+AGG | + | chr6_2:79600915-79600934 | Msa0930490:intron | 15.0% |
| !!! | AAATTCATTTTTAGTTTTCT+TGG | - | chr6_2:79601070-79601089 | None:intergenic | 15.0% |
| !!! | ATATACATTTTATGCTAAAA+AGG | - | chr6_2:79602014-79602033 | None:intergenic | 15.0% |
| !!! | GCTTTTAAATTGAATAAAAT+CGG | - | chr6_2:79602713-79602732 | None:intergenic | 15.0% |
| !!! | ATAAATTTTGAAGTATTGTT+GGG | - | chr6_2:79603245-79603264 | None:intergenic | 15.0% |
| !!! | AATAAATTTTGAAGTATTGT+TGG | - | chr6_2:79603246-79603265 | None:intergenic | 15.0% |
| !! | ACAATACTTCAAAATTTATT+TGG | + | chr6_2:79603246-79603265 | Msa0930490:three_prime_UTR | 15.0% |
| !! | AGAATTAATCAAGTTAATAA+AGG | + | chr6_2:79603515-79603534 | Msa0930490:three_prime_UTR | 15.0% |
| !! | AAAAAAAAAGATGAAAAGGA+AGG | - | chr6_2:79597539-79597558 | None:intergenic | 20.0% |
| !! | CTTTATTGAACTAATTTCTT+CGG | + | chr6_2:79597791-79597810 | Msa0930490:intron | 20.0% |
| !! | AAAGACTACAAATAACAAAA+GGG | - | chr6_2:79598283-79598302 | None:intergenic | 20.0% |
| !! | AAAAGACTACAAATAACAAA+AGG | - | chr6_2:79598284-79598303 | None:intergenic | 20.0% |
| !! | ACAAATGAAATAATCAGAAA+AGG | - | chr6_2:79598423-79598442 | None:intergenic | 20.0% |
| !! | CAATATTGAACTATAAAACA+GGG | - | chr6_2:79598537-79598556 | None:intergenic | 20.0% |
| !! | ACAATATTGAACTATAAAAC+AGG | - | chr6_2:79598538-79598557 | None:intergenic | 20.0% |
| !!! | AGTTCAATATTGTATTTTTC+AGG | + | chr6_2:79598545-79598564 | Msa0930490:intron | 20.0% |
| !!! | GTTCAATATTGTATTTTTCA+GGG | + | chr6_2:79598546-79598565 | Msa0930490:intron | 20.0% |
| !! | ATTAACAAAGAAAGTCATTA+AGG | + | chr6_2:79598713-79598732 | Msa0930490:intron | 20.0% |
| !!! | CACCTTAAGTATTTTTAAAA+TGG | - | chr6_2:79598855-79598874 | None:intergenic | 20.0% |
| !! | CAAATATTATTATATCAAGG+GGG | + | chr6_2:79599097-79599116 | Msa0930490:intron | 20.0% |
| !!! | TTTTTAACTGAATAGTAGTT+TGG | + | chr6_2:79599478-79599497 | Msa0930490:intron | 20.0% |
| !!! | CAATTTTTTCATGTTATCTA+GGG | + | chr6_2:79600040-79600059 | Msa0930490:intron | 20.0% |
| !!! | TGTTGTGTTGATATTTTAAT+TGG | + | chr6_2:79600076-79600095 | Msa0930490:intron | 20.0% |
| !! | AATTGGATAATATCTATTTC+AGG | + | chr6_2:79600093-79600112 | Msa0930490:intron | 20.0% |
| !! | AAATTAGATATATAAGCAGA+GGG | - | chr6_2:79600437-79600456 | None:intergenic | 20.0% |
| !!! | TAAATAGTCAAGAGTATTAT+AGG | - | chr6_2:79601123-79601142 | None:intergenic | 20.0% |
| !! | TTTGTTAGAATAAATACTCA+AGG | + | chr6_2:79601163-79601182 | Msa0930490:intron | 20.0% |
| !! | TTGTTAGAATAAATACTCAA+GGG | + | chr6_2:79601164-79601183 | Msa0930490:intron | 20.0% |
| !! | ATTTCATGTGAGAAATAAAA+AGG | - | chr6_2:79601447-79601466 | None:intergenic | 20.0% |
| !!! | AAACGTTTTTAGAAAACATA+TGG | - | chr6_2:79602232-79602251 | None:intergenic | 20.0% |
| !! | AAAATAGGCATAAAAAAATC+TGG | - | chr6_2:79602430-79602449 | None:intergenic | 20.0% |
| !! | CAGGATTATTATTAATATCA+GGG | - | chr6_2:79602587-79602606 | None:intergenic | 20.0% |
| !! | ACAGGATTATTATTAATATC+AGG | - | chr6_2:79602588-79602607 | None:intergenic | 20.0% |
| !!! | AACAACAAAGAGTTTTAAAA+AGG | - | chr6_2:79602886-79602905 | None:intergenic | 20.0% |
| !!! | TTTTAAAACTCTTTGTTGTT+AGG | + | chr6_2:79602886-79602905 | Msa0930490:intron | 20.0% |
| !!! | TTTAAAACTCTTTGTTGTTA+GGG | + | chr6_2:79602887-79602906 | Msa0930490:intron | 20.0% |
| !! | TAAATATGAAAATCATGTCA+AGG | - | chr6_2:79602989-79603008 | None:intergenic | 20.0% |
| !! | AAGAAAAAAGACTACAAATT+TGG | + | chr6_2:79603028-79603047 | Msa0930490:CDS | 20.0% |
| !!! | TTTTGAAAAGAAGAAAACAA+AGG | + | chr6_2:79603169-79603188 | Msa0930490:three_prime_UTR | 20.0% |
| !!! | TTTTAATGATCTATGAAACT+TGG | + | chr6_2:79603400-79603419 | Msa0930490:three_prime_UTR | 20.0% |
| !! | GATATATTGGTAACTAATCA+AGG | - | chr6_2:79598090-79598109 | None:intergenic | 25.0% |
| ! | TTGAAATGATTACTTATTGC+TGG | + | chr6_2:79598174-79598193 | Msa0930490:intron | 25.0% |
| ! | TGAAGTTATGGTGAATAAAA+AGG | - | chr6_2:79598315-79598334 | None:intergenic | 25.0% |
| ! | GATGATTAACTTTGATTACA+AGG | + | chr6_2:79598385-79598404 | Msa0930490:CDS | 25.0% |
| !!! | TTGTTTTTGTAGTTTCTTAG+TGG | + | chr6_2:79598469-79598488 | Msa0930490:intron | 25.0% |
| !!! | ATATTGTATTTTTCAGGGAA+AGG | + | chr6_2:79598551-79598570 | Msa0930490:intron | 25.0% |
| !! | TCCAGATTTTCATATAAAAC+AGG | - | chr6_2:79598689-79598708 | None:intergenic | 25.0% |
| !!! | CGCCATTTTAAAAATACTTA+AGG | + | chr6_2:79598850-79598869 | Msa0930490:intron | 25.0% |
| ! | AAACAACTTGTGTAAAAAAC+AGG | + | chr6_2:79599178-79599197 | Msa0930490:intron | 25.0% |
| ! | AACAACTTGTGTAAAAAACA+GGG | + | chr6_2:79599179-79599198 | Msa0930490:intron | 25.0% |
| ! | TATGAAGTCATTAGTAAGTT+TGG | + | chr6_2:79599573-79599592 | Msa0930490:intron | 25.0% |
| ! | TGGATTATATATTACTCCAA+AGG | + | chr6_2:79599593-79599612 | Msa0930490:intron | 25.0% |
| ! | TATATATTACTCCAAAGGTT+TGG | + | chr6_2:79599598-79599617 | Msa0930490:intron | 25.0% |
| ! | TAACATTAACTTCTCTCTAA+AGG | - | chr6_2:79599679-79599698 | None:intergenic | 25.0% |
| ! | AGATAGTAATAAGTATGCAT+GGG | - | chr6_2:79599884-79599903 | None:intergenic | 25.0% |
| !!! | AAATTGTTTTACATCAGTGT+TGG | + | chr6_2:79599914-79599933 | Msa0930490:intron | 25.0% |
| ! | AAAAAATTGCCCATAACAAA+CGG | - | chr6_2:79600029-79600048 | None:intergenic | 25.0% |
| !!! | GCAATTTTTTCATGTTATCT+AGG | + | chr6_2:79600039-79600058 | Msa0930490:intron | 25.0% |
| ! | GAAATTAGATATATAAGCAG+AGG | - | chr6_2:79600438-79600457 | None:intergenic | 25.0% |
| ! | TAAAGCAGTACAATAGTATT+GGG | - | chr6_2:79600546-79600565 | None:intergenic | 25.0% |
| ! | CATAGATATTAAATACCATG+CGG | + | chr6_2:79600624-79600643 | Msa0930490:intron | 25.0% |
| ! | ATAGATATTAAATACCATGC+GGG | + | chr6_2:79600625-79600644 | Msa0930490:intron | 25.0% |
| ! | TGAATAGATAACAACGAAAA+AGG | - | chr6_2:79601259-79601278 | None:intergenic | 25.0% |
| ! | AATTATGTCTAATGTAAGCA+TGG | - | chr6_2:79601627-79601646 | None:intergenic | 25.0% |
| ! | ACATTGTTCTCATCTTATAT+GGG | + | chr6_2:79601757-79601776 | Msa0930490:intron | 25.0% |
| !!! | TGTGTTTTCTAGAGTATTTT+CGG | - | chr6_2:79601911-79601930 | None:intergenic | 25.0% |
| !! | ATACTCTAGAAAACACATAA+TGG | + | chr6_2:79601914-79601933 | Msa0930490:intron | 25.0% |
| ! | GTATATCTCTTGTATTTCTT+CGG | + | chr6_2:79602028-79602047 | Msa0930490:intron | 25.0% |
| ! | TATATCTCTTGTATTTCTTC+GGG | + | chr6_2:79602029-79602048 | Msa0930490:intron | 25.0% |
| !! | TGCTCTGAATAAAATATGAA+AGG | - | chr6_2:79602111-79602130 | None:intergenic | 25.0% |
| !! | TTTATTCAGAGCAACATTTT+TGG | + | chr6_2:79602118-79602137 | Msa0930490:intron | 25.0% |
| ! | CCATTGAAATTGGAAAAATT+AGG | - | chr6_2:79602316-79602335 | None:intergenic | 25.0% |
| !! | CCTAATTTTTCCAATTTCAA+TGG | + | chr6_2:79602313-79602332 | Msa0930490:intron | 25.0% |
| ! | ATATGTGTATCCATTGAAAT+TGG | - | chr6_2:79602326-79602345 | None:intergenic | 25.0% |
| !!! | AGGGTTCTTTTTTAGTTAAA+GGG | - | chr6_2:79602544-79602563 | None:intergenic | 25.0% |
| !!! | AAGGGTTCTTTTTTAGTTAA+AGG | - | chr6_2:79602545-79602564 | None:intergenic | 25.0% |
| ! | GATTATTATGTTGTCGAATT+TGG | + | chr6_2:79602632-79602651 | Msa0930490:intron | 25.0% |
| ! | AAATCGGTTAAATTTCATCA+CGG | - | chr6_2:79602697-79602716 | None:intergenic | 25.0% |
| ! | ACAAATGTTGAAATCAGATA+AGG | - | chr6_2:79602738-79602757 | None:intergenic | 25.0% |
| ! | AAAGACTACAAATTTGGATT+TGG | + | chr6_2:79603034-79603053 | Msa0930490:CDS | 25.0% |
| ! | ACAAATGACCAAATTATTCA+AGG | - | chr6_2:79603449-79603468 | None:intergenic | 25.0% |
| ! | TTGGTCATTTGTTTATGATT+TGG | + | chr6_2:79603457-79603476 | Msa0930490:three_prime_UTR | 25.0% |
| !!! | TCATTTGTTTATGATTTGGT+GGG | + | chr6_2:79603461-79603480 | Msa0930490:three_prime_UTR | 25.0% |
| AACCAACGAAACAAACAAAA+GGG | + | chr6_2:79596943-79596962 | Msa0930490:five_prime_UTR | 30.0% | |
| !!! | GAATTTCTGGTTAAGCATTT+TGG | - | chr6_2:79597285-79597304 | None:intergenic | 30.0% |
| TGTGATTAAGAGAGAATTTC+TGG | - | chr6_2:79597298-79597317 | None:intergenic | 30.0% | |
| AGAAATTCTCTCTTAATCAC+AGG | + | chr6_2:79597297-79597316 | Msa0930490:CDS | 30.0% | |
| AAAATCCGAAAGAGAAAGTA+AGG | - | chr6_2:79597325-79597344 | None:intergenic | 30.0% | |
| ! | GAACTTGAATCTTTGTTTGT+AGG | + | chr6_2:79597360-79597379 | Msa0930490:intron | 30.0% |
| ! | TTTCTGATTGAAGGTGTATT+TGG | - | chr6_2:79597716-79597735 | None:intergenic | 30.0% |
| AATAATGCATTCTTTGACCA+AGG | + | chr6_2:79597883-79597902 | Msa0930490:intron | 30.0% | |
| !! | TTGATAGTGTTATGAGACTA+TGG | + | chr6_2:79598123-79598142 | Msa0930490:intron | 30.0% |
| AAAGGATAATTTATCTGCCA+TGG | + | chr6_2:79598201-79598220 | Msa0930490:intron | 30.0% | |
| TAAATTGAGAGATCATTCCA+TGG | - | chr6_2:79598221-79598240 | None:intergenic | 30.0% | |
| TACAAATAACAAAAGGGAAG+GGG | - | chr6_2:79598277-79598296 | None:intergenic | 30.0% | |
| CTACAAATAACAAAAGGGAA+GGG | - | chr6_2:79598278-79598297 | None:intergenic | 30.0% | |
| ACTACAAATAACAAAAGGGA+AGG | - | chr6_2:79598279-79598298 | None:intergenic | 30.0% | |
| ATATGCCAACTAGAAAATGA+GGG | - | chr6_2:79598448-79598467 | None:intergenic | 30.0% | |
| TATATGCCAACTAGAAAATG+AGG | - | chr6_2:79598449-79598468 | None:intergenic | 30.0% | |
| TTACAGAACACAGTTTCAAA+TGG | + | chr6_2:79598575-79598594 | Msa0930490:CDS | 30.0% | |
| TACAGAACACAGTTTCAAAT+GGG | + | chr6_2:79598576-79598595 | Msa0930490:CDS | 30.0% | |
| ! | GCCTGTTTTATATGAAAATC+TGG | + | chr6_2:79598685-79598704 | Msa0930490:intron | 30.0% |
| ! | AAAGATGGATATTTCTACTC+AGG | + | chr6_2:79598799-79598818 | Msa0930490:intron | 30.0% |
| ! | AAGATGGATATTTCTACTCA+GGG | + | chr6_2:79598800-79598819 | Msa0930490:intron | 30.0% |
| AAATACTTAAGGTGAGTGTA+CGG | + | chr6_2:79598861-79598880 | Msa0930490:intron | 30.0% | |
| AAGCATGAGCACTTATTAAA+TGG | - | chr6_2:79599347-79599366 | None:intergenic | 30.0% | |
| ! | TGTTACAAAAATTTAGGGTG+AGG | - | chr6_2:79599762-79599781 | None:intergenic | 30.0% |
| AATTTATGGACTTGTCTATG+CGG | + | chr6_2:79599811-79599830 | Msa0930490:intron | 30.0% | |
| ACCTGAAAAAATTAAGCTGA+TGG | - | chr6_2:79599837-79599856 | None:intergenic | 30.0% | |
| GATAGTAATAAGTATGCATG+GGG | - | chr6_2:79599883-79599902 | None:intergenic | 30.0% | |
| CAGATAGTAATAAGTATGCA+TGG | - | chr6_2:79599885-79599904 | None:intergenic | 30.0% | |
| ! | ATGGTAGTATTGAAGATCAT+TGG | + | chr6_2:79599964-79599983 | Msa0930490:intron | 30.0% |
| !! | AGATACATTCCGTTTGTTAT+GGG | + | chr6_2:79600017-79600036 | Msa0930490:intron | 30.0% |
| !! | TATCTATTTCAGGTCTGTTT+TGG | + | chr6_2:79600103-79600122 | Msa0930490:intron | 30.0% |
| !! | CATGGTTTGGTACAATTTAT+GGG | + | chr6_2:79600207-79600226 | Msa0930490:intron | 30.0% |
| ! | ATAAATGATTTGTCACACTC+TGG | - | chr6_2:79600278-79600297 | None:intergenic | 30.0% |
| TGTGACAAATCATTTATCGT+TGG | + | chr6_2:79600281-79600300 | Msa0930490:CDS | 30.0% | |
| GTGACAAATCATTTATCGTT+GGG | + | chr6_2:79600282-79600301 | Msa0930490:CDS | 30.0% | |
| GTAAAGCAGTACAATAGTAT+TGG | - | chr6_2:79600547-79600566 | None:intergenic | 30.0% | |
| GGAAAGACAAAACTTGAAAT+TGG | - | chr6_2:79600573-79600592 | None:intergenic | 30.0% | |
| !! | TAGTTTTACTGCAGGAATAT+TGG | - | chr6_2:79600594-79600613 | None:intergenic | 30.0% |
| CTTATCCAATTGTAAACCAT+TGG | + | chr6_2:79600663-79600682 | Msa0930490:intron | 30.0% | |
| CATAACCAATGGTTTACAAT+TGG | - | chr6_2:79600671-79600690 | None:intergenic | 30.0% | |
| ATCTATATTCCCACAATTCA+TGG | - | chr6_2:79600764-79600783 | None:intergenic | 30.0% | |
| ATCATTAATGCTAGCACTAT+TGG | + | chr6_2:79601188-79601207 | Msa0930490:intron | 30.0% | |
| TCATTAATGCTAGCACTATT+GGG | + | chr6_2:79601189-79601208 | Msa0930490:intron | 30.0% | |
| ACAAATCTACAATGTGATGA+TGG | - | chr6_2:79601412-79601431 | None:intergenic | 30.0% | |
| TTCTTCTATGAATTTAGCCA+CGG | + | chr6_2:79601570-79601589 | Msa0930490:intron | 30.0% | |
| TGGAGTTTCATACTCAATTA+GGG | - | chr6_2:79601738-79601757 | None:intergenic | 30.0% | |
| CATATAAGATGAGAACAATG+TGG | - | chr6_2:79601758-79601777 | None:intergenic | 30.0% | |
| CACATTGTTCTCATCTTATA+TGG | + | chr6_2:79601756-79601775 | Msa0930490:intron | 30.0% | |
| ! | GTTGCTAATTTTTACTGTAG+AGG | + | chr6_2:79602051-79602070 | Msa0930490:intron | 30.0% |
| TTTCAATGGATACACATATC+TGG | + | chr6_2:79602327-79602346 | Msa0930490:intron | 30.0% | |
| TATGTTGTCGAATTTGGATT+AGG | + | chr6_2:79602638-79602657 | Msa0930490:intron | 30.0% | |
| ATGTTGTCGAATTTGGATTA+GGG | + | chr6_2:79602639-79602658 | Msa0930490:intron | 30.0% | |
| CACGGTAAGCAAAATTTAAA+TGG | - | chr6_2:79602679-79602698 | None:intergenic | 30.0% | |
| AATGTTGAAATCAGATAAGG+CGG | - | chr6_2:79602735-79602754 | None:intergenic | 30.0% | |
| TCTGATTTCAACATTTGTGT+TGG | + | chr6_2:79602740-79602759 | Msa0930490:intron | 30.0% | |
| ! | AGCTCTAATTTATTCTCCAA+CGG | - | chr6_2:79603065-79603084 | None:intergenic | 30.0% |
| ! | TCTTGCTTCTTTTTACTTGT+TGG | + | chr6_2:79603136-79603155 | Msa0930490:three_prime_UTR | 30.0% |
| ! | CTTGCTTCTTTTTACTTGTT+GGG | + | chr6_2:79603137-79603156 | Msa0930490:three_prime_UTR | 30.0% |
| TGAAAAGAAGAAAACAAAGG+AGG | + | chr6_2:79603172-79603191 | Msa0930490:three_prime_UTR | 30.0% | |
| GAGGAATATATCATTTGTGT+CGG | + | chr6_2:79603191-79603210 | Msa0930490:three_prime_UTR | 30.0% | |
| CTTGATGTCCTTGAATAATT+TGG | + | chr6_2:79603438-79603457 | Msa0930490:three_prime_UTR | 30.0% | |
| ! | GTCATTTGTTTATGATTTGG+TGG | + | chr6_2:79603460-79603479 | Msa0930490:three_prime_UTR | 30.0% |
| TCACAAGCATAGCATACTTT+GGG | + | chr6_2:79596916-79596935 | Msa0930490:five_prime_UTR | 35.0% | |
| GAACCAACGAAACAAACAAA+AGG | + | chr6_2:79596942-79596961 | Msa0930490:five_prime_UTR | 35.0% | |
| !! | AACCCTTTTGTTTGTTTCGT+TGG | - | chr6_2:79596948-79596967 | None:intergenic | 35.0% |
| AGGTACCTTACTTTCTCTTT+CGG | + | chr6_2:79597317-79597336 | Msa0930490:intron | 35.0% | |
| TTTGATACTCAGTGTTTCGA+TGG | + | chr6_2:79597416-79597435 | Msa0930490:intron | 35.0% | |
| TTGATACTCAGTGTTTCGAT+GGG | + | chr6_2:79597417-79597436 | Msa0930490:intron | 35.0% | |
| CCAACTGCTAACTATGAATT+CGG | + | chr6_2:79597483-79597502 | Msa0930490:CDS | 35.0% | |
| ! | TGAAAAGGAAGGTATACCTT+AGG | - | chr6_2:79597528-79597547 | None:intergenic | 35.0% |
| ATATCAACGCTTATGGTTGA+AGG | - | chr6_2:79597846-79597865 | None:intergenic | 35.0% | |
| CTCTACAATATCAACGCTTA+TGG | - | chr6_2:79597853-79597872 | None:intergenic | 35.0% | |
| !! | CATAAGCGTTGATATTGTAG+AGG | + | chr6_2:79597851-79597870 | Msa0930490:intron | 35.0% |
| !!! | TGTTTTGTAGCTGTTGCTTT+TGG | + | chr6_2:79597909-79597928 | Msa0930490:intron | 35.0% |
| !!! | GTTTTGTAGCTGTTGCTTTT+GGG | + | chr6_2:79597910-79597929 | Msa0930490:intron | 35.0% |
| !!! | TTTTGTAGCTGTTGCTTTTG+GGG | + | chr6_2:79597911-79597930 | Msa0930490:intron | 35.0% |
| CTAATCAAGGAAGTAGAAAC+AGG | - | chr6_2:79598077-79598096 | None:intergenic | 35.0% | |
| ! | TTACTTATTGCTGGCTGAAA+AGG | + | chr6_2:79598183-79598202 | Msa0930490:intron | 35.0% |
| ! | GGCAAGAAAGTATGAAGTTA+TGG | - | chr6_2:79598327-79598346 | None:intergenic | 35.0% |
| ! | CTCACTTGTTAGCTGTAAAA+AGG | - | chr6_2:79598348-79598367 | None:intergenic | 35.0% |
| ACAGAACACAGTTTCAAATG+GGG | + | chr6_2:79598577-79598596 | Msa0930490:CDS | 35.0% | |
| GGCAAGTTATATTCAGGTAA+TGG | + | chr6_2:79598617-79598636 | Msa0930490:intron | 35.0% | |
| TAAAGTTGTTGTCACGTGAT+AGG | + | chr6_2:79599136-79599155 | Msa0930490:intron | 35.0% | |
| ! | TAGGTCATGAGTTCAAGTTA+TGG | + | chr6_2:79599155-79599174 | Msa0930490:intron | 35.0% |
| GTGCACTAAAACTATTCGTA+GGG | - | chr6_2:79599250-79599269 | None:intergenic | 35.0% | |
| AGTGCACTAAAACTATTCGT+AGG | - | chr6_2:79599251-79599270 | None:intergenic | 35.0% | |
| !!! | TACGAATAGTTTTAGTGCAC+TGG | + | chr6_2:79599250-79599269 | Msa0930490:intron | 35.0% |
| !!! | ACGAATAGTTTTAGTGCACT+GGG | + | chr6_2:79599251-79599270 | Msa0930490:intron | 35.0% |
| TATGAGAAAGCCACAAGTAT+CGG | + | chr6_2:79599294-79599313 | Msa0930490:intron | 35.0% | |
| GTATATATACCCGATACTTG+TGG | - | chr6_2:79599307-79599326 | None:intergenic | 35.0% | |
| !! | AAGTATCGGGTATATATACG+TGG | + | chr6_2:79599308-79599327 | Msa0930490:intron | 35.0% |
| CAGTGCTATGCATATGTATA+TGG | + | chr6_2:79599401-79599420 | Msa0930490:intron | 35.0% | |
| AGTAGTTTGGCCAATATTTG+AGG | + | chr6_2:79599491-79599510 | Msa0930490:intron | 35.0% | |
| TGGTCTAGTGGTTAAAAAAC+AGG | + | chr6_2:79599618-79599637 | Msa0930490:intron | 35.0% | |
| AGTGGTTAAAAAACAGGTCT+TGG | + | chr6_2:79599624-79599643 | Msa0930490:intron | 35.0% | |
| TAAAAAACAGGTCTTGGATC+CGG | + | chr6_2:79599630-79599649 | Msa0930490:intron | 35.0% | |
| ! | AAAAATTTAGGGTGAGGAGA+TGG | - | chr6_2:79599756-79599775 | None:intergenic | 35.0% |
| !!! | GCCATCAGCTTAATTTTTTC+AGG | + | chr6_2:79599833-79599852 | Msa0930490:intron | 35.0% |
| ! | GAGATACATTCCGTTTGTTA+TGG | + | chr6_2:79600016-79600035 | Msa0930490:intron | 35.0% |
| ATTGACGTGTTCAGGATTAA+GGG | - | chr6_2:79600172-79600191 | None:intergenic | 35.0% | |
| !! | GCATGGTTTGGTACAATTTA+TGG | + | chr6_2:79600206-79600225 | Msa0930490:intron | 35.0% |
| ACAAATCATTTATCGTTGGG+TGG | + | chr6_2:79600285-79600304 | Msa0930490:CDS | 35.0% | |
| TCGCTACAACACTGATAAAA+TGG | + | chr6_2:79600359-79600378 | Msa0930490:CDS | 35.0% | |
| AGACAAAACTTGAAATTGGC+TGG | - | chr6_2:79600569-79600588 | None:intergenic | 35.0% | |
| TATTAAATACCATGCGGGTA+TGG | + | chr6_2:79600630-79600649 | Msa0930490:intron | 35.0% | |
| ! | AACCATTGGTTATGCTACAA+AGG | + | chr6_2:79600677-79600696 | Msa0930490:intron | 35.0% |
| ! | ACCATTGGTTATGCTACAAA+GGG | + | chr6_2:79600678-79600697 | Msa0930490:intron | 35.0% |
| GTCAATGGAGGAATAGATAA+GGG | - | chr6_2:79600798-79600817 | None:intergenic | 35.0% | |
| !!! | TCCTTTTTAGCTGTCGTTTT+AGG | + | chr6_2:79601030-79601049 | Msa0930490:intron | 35.0% |
| !!! | CCTTTTTAGCTGTCGTTTTA+GGG | + | chr6_2:79601031-79601050 | Msa0930490:intron | 35.0% |
| ! | TCTTTTGAGCTATGTTCAGA+AGG | + | chr6_2:79601369-79601388 | Msa0930490:CDS | 35.0% |
| TTATGACTACATTCTCAGAC+AGG | + | chr6_2:79601540-79601559 | Msa0930490:CDS | 35.0% | |
| AGACATAATTGAGCCTTGAA+CGG | + | chr6_2:79601637-79601656 | Msa0930490:intron | 35.0% | |
| GTGGAGTTTCATACTCAATT+AGG | - | chr6_2:79601739-79601758 | None:intergenic | 35.0% | |
| ! | ATTTTCGGCATCCAAATCAT+TGG | - | chr6_2:79601896-79601915 | None:intergenic | 35.0% |
| GAAGTTGGACACAAAAACTA+GGG | - | chr6_2:79601988-79602007 | None:intergenic | 35.0% | |
| !! | TTTTGGCTGTCTTCTCTATT+TGG | + | chr6_2:79602135-79602154 | Msa0930490:intron | 35.0% |
| GCAGCTTTCAAAAAACACTA+TGG | - | chr6_2:79602208-79602227 | None:intergenic | 35.0% | |
| ATTGGAAAAATTAGGTGCTC+TGG | - | chr6_2:79602308-79602327 | None:intergenic | 35.0% | |
| AGTAATGCTTTGTCTTTCCT+TGG | + | chr6_2:79602389-79602408 | Msa0930490:intron | 35.0% | |
| AGCAAAATTTAAATGGCCAC+CGG | - | chr6_2:79602672-79602691 | None:intergenic | 35.0% | |
| !! | TTATTTTATAGTGCCGCCTT+AGG | + | chr6_2:79602763-79602782 | Msa0930490:intron | 35.0% |
| ! | TATTTTATAGTGCCGCCTTA+GGG | + | chr6_2:79602764-79602783 | Msa0930490:intron | 35.0% |
| GAATTTCATTCTTTCTGCAG+AGG | + | chr6_2:79602848-79602867 | Msa0930490:CDS | 35.0% | |
| TATGAAAATCATGTCAAGGC+AGG | - | chr6_2:79602985-79603004 | None:intergenic | 35.0% | |
| GTTGGAGAATAAATTAGAGC+TGG | + | chr6_2:79603064-79603083 | Msa0930490:exon | 35.0% | |
| AAGAAGCAAGAAAACTTGCA+AGG | - | chr6_2:79603127-79603146 | None:intergenic | 35.0% | |
| AGTATTGTTGGGTCAATTTG+TGG | - | chr6_2:79603234-79603253 | None:intergenic | 35.0% | |
| GTCACAAGCATAGCATACTT+TGG | + | chr6_2:79596915-79596934 | Msa0930490:five_prime_UTR | 40.0% | |
| CTCTCTCTGATCTCTAACAA+TGG | + | chr6_2:79596994-79597013 | Msa0930490:exon | 40.0% | |
| ATCTCTAACAATGGCGACTA+TGG | + | chr6_2:79597003-79597022 | Msa0930490:exon | 40.0% | |
| TGAAGTTCTTCGAAGGGAAT+GGG | - | chr6_2:79597097-79597116 | None:intergenic | 40.0% | |
| ATGAAGTTCTTCGAAGGGAA+TGG | - | chr6_2:79597098-79597117 | None:intergenic | 40.0% | |
| !!! | GTTTTCAGTGTCTTTGAAGC+CGG | + | chr6_2:79597229-79597248 | Msa0930490:intron | 40.0% |
| ! | TTGAAGCCGGAACTTTTTGA+AGG | + | chr6_2:79597242-79597261 | Msa0930490:CDS | 40.0% |
| CCGAATTCATAGTTAGCAGT+TGG | - | chr6_2:79597486-79597505 | None:intergenic | 40.0% | |
| GAACTTCATCGATCATCCTA+AGG | + | chr6_2:79597509-79597528 | Msa0930490:CDS | 40.0% | |
| CTGCTGACATTTCTGATTGA+AGG | - | chr6_2:79597725-79597744 | None:intergenic | 40.0% | |
| GAGGATTCTGACATGTATAC+TGG | + | chr6_2:79597749-79597768 | Msa0930490:intron | 40.0% | |
| ACAGCTACAAAACATCACCT+TGG | - | chr6_2:79597903-79597922 | None:intergenic | 40.0% | |
| ! | CACTTTGAAAGCAAATGCTC+AGG | + | chr6_2:79597993-79598012 | Msa0930490:intron | 40.0% |
| !! | TGTTGCCCTCATTTTCTAGT+TGG | + | chr6_2:79598440-79598459 | Msa0930490:intron | 40.0% |
| ACACAGTTTCAAATGGGGAA+TGG | + | chr6_2:79598582-79598601 | Msa0930490:CDS | 40.0% | |
| ! | AATATAACTTGCCCCTAGCA+AGG | - | chr6_2:79598610-79598629 | None:intergenic | 40.0% |
| ! | TGGATATTTCTACTCAGGGA+TGG | + | chr6_2:79598804-79598823 | Msa0930490:intron | 40.0% |
| ATTTCTACTCAGGGATGGTA+AGG | + | chr6_2:79598809-79598828 | Msa0930490:intron | 40.0% | |
| ATTATATCAAGGGGGAACCT+TGG | + | chr6_2:79599105-79599124 | Msa0930490:intron | 40.0% | |
| CTTGTGTAAAAAACAGGGTG+AGG | + | chr6_2:79599184-79599203 | Msa0930490:intron | 40.0% | |
| TATTCGTAGGGTCTGATAAG+GGG | - | chr6_2:79599238-79599257 | None:intergenic | 40.0% | |
| CTATTCGTAGGGTCTGATAA+GGG | - | chr6_2:79599239-79599258 | None:intergenic | 40.0% | |
| ACTATTCGTAGGGTCTGATA+AGG | - | chr6_2:79599240-79599259 | None:intergenic | 40.0% | |
| ATGAGAAAGCCACAAGTATC+GGG | + | chr6_2:79599295-79599314 | Msa0930490:intron | 40.0% | |
| ! | TTTGGCCAATATTTGAGGTC+AGG | + | chr6_2:79599496-79599515 | Msa0930490:intron | 40.0% |
| CATCACCTGACCTCAAATAT+TGG | - | chr6_2:79599504-79599523 | None:intergenic | 40.0% | |
| ! | CAATATTTGAGGTCAGGTGA+TGG | + | chr6_2:79599502-79599521 | Msa0930490:intron | 40.0% |
| TAACCACTAGACCAAACCTT+TGG | - | chr6_2:79599612-79599631 | None:intergenic | 40.0% | |
| ! | TAACTTCTCTCTAAAGGCAC+TGG | - | chr6_2:79599673-79599692 | None:intergenic | 40.0% |
| ! | GGACTTAGAGCACTTACAAA+GGG | - | chr6_2:79599704-79599723 | None:intergenic | 40.0% |
| ! | AGGACTTAGAGCACTTACAA+AGG | - | chr6_2:79599705-79599724 | None:intergenic | 40.0% |
| ! | TGTAAGTGCTCTAAGTCCTA+AGG | + | chr6_2:79599706-79599725 | Msa0930490:intron | 40.0% |
| GATTGACGTGTTCAGGATTA+AGG | - | chr6_2:79600173-79600192 | None:intergenic | 40.0% | |
| TTGGATTGATTGACGTGTTC+AGG | - | chr6_2:79600180-79600199 | None:intergenic | 40.0% | |
| AATCAATCCAATCTGCTGCA+TGG | + | chr6_2:79600189-79600208 | Msa0930490:intron | 40.0% | |
| ATATATAAGCAGAGGGAAGC+AGG | - | chr6_2:79600430-79600449 | None:intergenic | 40.0% | |
| !! | GTACATCGTAGTTTTACTGC+AGG | - | chr6_2:79600602-79600621 | None:intergenic | 40.0% |
| ACCCTTTGTAGCATAACCAA+TGG | - | chr6_2:79600682-79600701 | None:intergenic | 40.0% | |
| GGTCAATGGAGGAATAGATA+AGG | - | chr6_2:79600799-79600818 | None:intergenic | 40.0% | |
| GACAGCTAAAAAGGAACAGA+GGG | - | chr6_2:79601025-79601044 | None:intergenic | 40.0% | |
| CCCTAAAACGACAGCTAAAA+AGG | - | chr6_2:79601034-79601053 | None:intergenic | 40.0% | |
| CAAATTGATCATCTGCATCC+AGG | + | chr6_2:79601312-79601331 | Msa0930490:intron | 40.0% | |
| ! | TGTTCAGAAGGTTTCTGAGA+AGG | + | chr6_2:79601381-79601400 | Msa0930490:CDS | 40.0% |
| ! | TCATGTCGTACTATTTTCCG+TGG | - | chr6_2:79601590-79601609 | None:intergenic | 40.0% |
| ACGACATGAATGTGAATGTG+TGG | + | chr6_2:79601601-79601620 | Msa0930490:intron | 40.0% | |
| GACATAATTGAGCCTTGAAC+GGG | + | chr6_2:79601638-79601657 | Msa0930490:intron | 40.0% | |
| ! | CAGTTAGAGTTGCTTTCATG+TGG | + | chr6_2:79601674-79601693 | Msa0930490:intron | 40.0% |
| CTCATCTTATATGGGTGCAT+CGG | + | chr6_2:79601765-79601784 | Msa0930490:intron | 40.0% | |
| ! | ACTTGCTGCAATTGAAAGTG+TGG | + | chr6_2:79601794-79601813 | Msa0930490:intron | 40.0% |
| !!! | TGTACGTGTGCTGTTTGTTT+TGG | + | chr6_2:79601859-79601878 | Msa0930490:intron | 40.0% |
| CGAAGTTGGACACAAAAACT+AGG | - | chr6_2:79601989-79602008 | None:intergenic | 40.0% | |
| ! | ATGCTAAAAAGGTGCGAAGT+TGG | - | chr6_2:79602003-79602022 | None:intergenic | 40.0% |
| TTGTTTCCTCTACTAGAACC+AGG | + | chr6_2:79602365-79602384 | Msa0930490:intron | 40.0% | |
| TGTTTCCTCTACTAGAACCA+GGG | + | chr6_2:79602366-79602385 | Msa0930490:intron | 40.0% | |
| ! | AAAGACAAAGCATTACTCCC+TGG | - | chr6_2:79602386-79602405 | None:intergenic | 40.0% |
| AATGCTTTGTCTTTCCTTGG+CGG | + | chr6_2:79602392-79602411 | Msa0930490:intron | 40.0% | |
| ! | TTGTCGAATTTGGATTAGGG+AGG | + | chr6_2:79602642-79602661 | Msa0930490:intron | 40.0% |
| ! | ATTTTATAGTGCCGCCTTAG+GGG | + | chr6_2:79602765-79602784 | Msa0930490:intron | 40.0% |
| AAAAGCAGCACAAACACCAT+TGG | - | chr6_2:79602802-79602821 | None:intergenic | 40.0% | |
| !!! | TGGTGTTTGTGCTGCTTTTT+TGG | + | chr6_2:79602803-79602822 | Msa0930490:CDS | 40.0% |
| !!! | TGTTTGTGCTGCTTTTTTGG+AGG | + | chr6_2:79602806-79602825 | Msa0930490:CDS | 40.0% |
| TTTGGAGGAGAGGTTAAACA+TGG | + | chr6_2:79602821-79602840 | Msa0930490:CDS | 40.0% | |
| TTGGAGGAGAGGTTAAACAT+GGG | + | chr6_2:79602822-79602841 | Msa0930490:CDS | 40.0% | |
| !! | TTTGGATTTGGTTTGACCGT+TGG | + | chr6_2:79603046-79603065 | Msa0930490:CDS | 40.0% |
| TCGCGATGAAGTTCTTCGAA+GGG | - | chr6_2:79597103-79597122 | None:intergenic | 45.0% | |
| TTCGCGATGAAGTTCTTCGA+AGG | - | chr6_2:79597104-79597123 | None:intergenic | 45.0% | |
| CGCATGCCTTCAAAAAGTTC+CGG | - | chr6_2:79597251-79597270 | None:intergenic | 45.0% | |
| GACTGAGAAGGAATCTCAGT+AGG | - | chr6_2:79597444-79597463 | None:intergenic | 45.0% | |
| ATAACCTCAGCAGACTGAGA+AGG | - | chr6_2:79597456-79597475 | None:intergenic | 45.0% | |
| AGTGACTGACGTCAATGTCA+AGG | - | chr6_2:79597668-79597687 | None:intergenic | 45.0% | |
| CAGAAATGTCAGCAGTACAG+AGG | + | chr6_2:79597730-79597749 | Msa0930490:intron | 45.0% | |
| CTTATGGTTGAAGGCTTGTG+TGG | - | chr6_2:79597837-79597856 | None:intergenic | 45.0% | |
| GAGAGCTATGACTGATGGAA+GGG | + | chr6_2:79597933-79597952 | Msa0930490:intron | 45.0% | |
| ATCATCCCTTGCGACATATG+TGG | - | chr6_2:79598371-79598390 | None:intergenic | 45.0% | |
| GCTAGGGGCAAGTTATATTC+AGG | + | chr6_2:79598611-79598630 | Msa0930490:CDS | 45.0% | |
| GTACAACACACCGAAATGGT+GGG | + | chr6_2:79599211-79599230 | Msa0930490:intron | 45.0% | |
| ! | ACTCCAAAGGTTTGGTCTAG+TGG | + | chr6_2:79599606-79599625 | Msa0930490:intron | 45.0% |
| !! | TTCTCTCTAAAGGCACTGGT+GGG | - | chr6_2:79599669-79599688 | None:intergenic | 45.0% |
| ATCCAATCTGCTGCATGGTT+TGG | + | chr6_2:79600194-79600213 | Msa0930490:intron | 45.0% | |
| TACCAAACCATGCAGCAGAT+TGG | - | chr6_2:79600199-79600218 | None:intergenic | 45.0% | |
| TCATTTATCGTTGGGTGGAG+AGG | + | chr6_2:79600290-79600309 | Msa0930490:CDS | 45.0% | |
| !!! | GTTGGGTGGAGAGGTATTTT+GGG | + | chr6_2:79600299-79600318 | Msa0930490:CDS | 45.0% |
| ! | AAGCTGCTGATTGTGCATGT+AGG | - | chr6_2:79600406-79600425 | None:intergenic | 45.0% |
| ! | AAAAGCATACCATACCCGCA+TGG | - | chr6_2:79600642-79600661 | None:intergenic | 45.0% |
| CGACAGCTAAAAAGGAACAG+AGG | - | chr6_2:79601026-79601045 | None:intergenic | 45.0% | |
| CAAAAGAACCATTCCAGTGC+TGG | - | chr6_2:79601356-79601375 | None:intergenic | 45.0% | |
| TCACATGAAATGTTCCTCGC+AGG | + | chr6_2:79601456-79601475 | Msa0930490:intron | 45.0% | |
| TGAGCCTTGAACGGGATTAT+TGG | + | chr6_2:79601646-79601665 | Msa0930490:intron | 45.0% | |
| TGAGCCAATAATCCCGTTCA+AGG | - | chr6_2:79601653-79601672 | None:intergenic | 45.0% | |
| ATCTTATATGGGTGCATCGG+AGG | + | chr6_2:79601768-79601787 | Msa0930490:intron | 45.0% | |
| TCTTATATGGGTGCATCGGA+GGG | + | chr6_2:79601769-79601788 | Msa0930490:intron | 45.0% | |
| CACTGCATCCTCCAATGATT+TGG | + | chr6_2:79601882-79601901 | Msa0930490:intron | 45.0% | |
| TTCGGCATCCAAATCATTGG+AGG | - | chr6_2:79601893-79601912 | None:intergenic | 45.0% | |
| !! | TTACTCCCTGGTTCTAGTAG+AGG | - | chr6_2:79602374-79602393 | None:intergenic | 45.0% |
| GATCCTAGTCAGCTTTCGAA+GGG | - | chr6_2:79602563-79602582 | None:intergenic | 45.0% | |
| TGATCCTAGTCAGCTTTCGA+AGG | - | chr6_2:79602564-79602583 | None:intergenic | 45.0% | |
| ! | TCCTGTGTTACTGACATGAG+AGG | + | chr6_2:79602602-79602621 | Msa0930490:intron | 45.0% |
| ACCTCTCATGTCAGTAACAC+AGG | - | chr6_2:79602606-79602625 | None:intergenic | 45.0% | |
| ! | TTTGGATTAGGGAGGTCATC+CGG | + | chr6_2:79602650-79602669 | Msa0930490:intron | 45.0% |
| AATCAACCTTTCCCCTAAGG+CGG | - | chr6_2:79602779-79602798 | None:intergenic | 45.0% | |
| TGGAATCAACCTTTCCCCTA+AGG | - | chr6_2:79602782-79602801 | None:intergenic | 45.0% | |
| ! | AGGGGAAAGGTTGATTCCAA+TGG | + | chr6_2:79602783-79602802 | Msa0930490:CDS | 45.0% |
| GTTGTTAGGGTGTGTGTGTT+TGG | + | chr6_2:79602900-79602919 | Msa0930490:intron | 45.0% | |
| ! | GCTAGTCTGGCTAAAGGAAA+TGG | - | chr6_2:79603105-79603124 | None:intergenic | 45.0% |
| ! | GAAAACTTGCAAGGCTAGTC+TGG | - | chr6_2:79603118-79603137 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTTTATTTAAAGA+TGG | + | chr6_2:79598784-79598803 | Msa0930490:intron | 5.0% |
| !! | TATATGTAAATATAAATTTA+TGG | + | chr6_2:79599797-79599816 | Msa0930490:intron | 5.0% |
| !!! | CTATTTTAAAATTTTTAATT+GGG | + | chr6_2:79602443-79602462 | Msa0930490:intron | 5.0% |
| CTGATCGACCTTCTTGTCGT+CGG | - | chr6_2:79597047-79597066 | None:intergenic | 50.0% | |
| TCTTCGAAGGGAATGGGACA+AGG | - | chr6_2:79597091-79597110 | None:intergenic | 50.0% | |
| GATTCCTTCTCAGTCTGCTG+AGG | + | chr6_2:79597449-79597468 | Msa0930490:CDS | 50.0% | |
| ATCAGTGTCAGTGCTGTGCT+TGG | - | chr6_2:79597595-79597614 | None:intergenic | 50.0% | |
| TTGGGGAGAGCTATGACTGA+TGG | + | chr6_2:79597928-79597947 | Msa0930490:intron | 50.0% | |
| GGAGAGCTATGACTGATGGA+AGG | + | chr6_2:79597932-79597951 | Msa0930490:intron | 50.0% | |
| AGTGAGCCACATATGTCGCA+AGG | + | chr6_2:79598362-79598381 | Msa0930490:CDS | 50.0% | |
| GTGAGCCACATATGTCGCAA+GGG | + | chr6_2:79598363-79598382 | Msa0930490:CDS | 50.0% | |
| ACTCAGGGATGGTAAGGTAC+AGG | + | chr6_2:79598815-79598834 | Msa0930490:intron | 50.0% | |
| GGGATGGTAAGGTACAGGTA+CGG | + | chr6_2:79598820-79598839 | Msa0930490:intron | 50.0% | |
| GGATGGTAAGGTACAGGTAC+GGG | + | chr6_2:79598821-79598840 | Msa0930490:intron | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | - | chr6_2:79599125-79599144 | None:intergenic | 50.0% | |
| CTGCGTACAACACACCGAAA+TGG | + | chr6_2:79599207-79599226 | Msa0930490:intron | 50.0% | |
| CGTACAACACACCGAAATGG+TGG | + | chr6_2:79599210-79599229 | Msa0930490:intron | 50.0% | |
| GATAAGGGGTCCCACCATTT+CGG | - | chr6_2:79599224-79599243 | None:intergenic | 50.0% | |
| GTCTTGGATCCGGAAGTTCT+GGG | + | chr6_2:79599640-79599659 | Msa0930490:intron | 50.0% | |
| !! | TCTCTCTAAAGGCACTGGTG+GGG | - | chr6_2:79599668-79599687 | None:intergenic | 50.0% |
| !! | CTTCTCTCTAAAGGCACTGG+TGG | - | chr6_2:79599670-79599689 | None:intergenic | 50.0% |
| TCCTAAGGTCTTACCTGCCT+TGG | + | chr6_2:79599721-79599740 | Msa0930490:intron | 50.0% | |
| TCCAAGGCAGGTAAGACCTT+AGG | - | chr6_2:79599725-79599744 | None:intergenic | 50.0% | |
| !!! | CGTTGGGTGGAGAGGTATTT+TGG | + | chr6_2:79600298-79600317 | Msa0930490:CDS | 50.0% |
| CCTATAGCACTGTCACGTTG+CGG | + | chr6_2:79600704-79600723 | Msa0930490:intron | 50.0% | |
| GAACATGGAGGTTGGGTCAA+TGG | - | chr6_2:79600813-79600832 | None:intergenic | 50.0% | |
| CTGGGTAGAACATGGAGGTT+GGG | - | chr6_2:79600820-79600839 | None:intergenic | 50.0% | |
| CTCCATGTTCTACCCAGCAA+GGG | + | chr6_2:79600823-79600842 | Msa0930490:intron | 50.0% | |
| TCCATGTTCTACCCAGCAAG+GGG | + | chr6_2:79600824-79600843 | Msa0930490:intron | 50.0% | |
| ! | ACAAGTTGCCAGCACTGGAA+TGG | + | chr6_2:79601345-79601364 | Msa0930490:CDS | 50.0% |
| ! | AGAGACGTCACTGCTAGCTT+TGG | + | chr6_2:79601517-79601536 | Msa0930490:CDS | 50.0% |
| GAACCCTTCGAAAGCTGACT+AGG | + | chr6_2:79602557-79602576 | Msa0930490:intron | 50.0% | |
| !!! | GTGCTGCTTTTTTGGAGGAG+AGG | + | chr6_2:79602811-79602830 | Msa0930490:CDS | 50.0% |
| !! | TGCAAGGCTAGTCTGGCTAA+AGG | - | chr6_2:79603111-79603130 | None:intergenic | 50.0% |
| ! | TCTTGCCCTGTTTTCCCTTG+AGG | + | chr6_2:79603272-79603291 | Msa0930490:three_prime_UTR | 50.0% |
| ! | CTTGCCCTGTTTTCCCTTGA+GGG | + | chr6_2:79603273-79603292 | Msa0930490:three_prime_UTR | 50.0% |
| ! | TTGCCCTGTTTTCCCTTGAG+GGG | + | chr6_2:79603274-79603293 | Msa0930490:three_prime_UTR | 50.0% |
| TTCCCCCTCAAGGGAAAACA+GGG | - | chr6_2:79603280-79603299 | None:intergenic | 50.0% | |
| TCTACATCCTTCCCCCTCAA+GGG | - | chr6_2:79603289-79603308 | None:intergenic | 50.0% | |
| ATCGACCTTCTTGTCGTCGG+CGG | - | chr6_2:79597044-79597063 | None:intergenic | 55.0% | |
| GGGAATGGGACAAGGAAGGT+TGG | - | chr6_2:79597083-79597102 | None:intergenic | 55.0% | |
| CGAAGGGAATGGGACAAGGA+AGG | - | chr6_2:79597087-79597106 | None:intergenic | 55.0% | |
| ATGGGGAATGGAGCCTTGCT+AGG | + | chr6_2:79598594-79598613 | Msa0930490:CDS | 55.0% | |
| TGGGGAATGGAGCCTTGCTA+GGG | + | chr6_2:79598595-79598614 | Msa0930490:CDS | 55.0% | |
| GGTCTTGGATCCGGAAGTTC+TGG | + | chr6_2:79599639-79599658 | Msa0930490:intron | 55.0% | |
| AGGTCTTACCTGCCTTGGAC+TGG | + | chr6_2:79599726-79599745 | Msa0930490:intron | 55.0% | |
| GGTCTTACCTGCCTTGGACT+GGG | + | chr6_2:79599727-79599746 | Msa0930490:intron | 55.0% | |
| GTCTTACCTGCCTTGGACTG+GGG | + | chr6_2:79599728-79599747 | Msa0930490:intron | 55.0% | |
| !!! | GGTGGAGAGGTATTTTGGGC+TGG | + | chr6_2:79600303-79600322 | Msa0930490:CDS | 55.0% |
| ! | GCTGGTCAGCATCGAAAGTC+CGG | + | chr6_2:79600321-79600340 | Msa0930490:CDS | 55.0% |
| ! | CAGCATCGAAAGTCCGGTGT+AGG | + | chr6_2:79600327-79600346 | Msa0930490:CDS | 55.0% |
| GCGAGCAGCATAACCTACAC+CGG | - | chr6_2:79600343-79600362 | None:intergenic | 55.0% | |
| CCGCAACGTGACAGTGCTAT+AGG | - | chr6_2:79600707-79600726 | None:intergenic | 55.0% | |
| TAGCACTGTCACGTTGCGGA+AGG | + | chr6_2:79600708-79600727 | Msa0930490:intron | 55.0% | |
| TTCATGGCCCCAGGCAAGTA+CGG | - | chr6_2:79600748-79600767 | None:intergenic | 55.0% | |
| TTGCCTGGGGCCATGAATTG+TGG | + | chr6_2:79600751-79600770 | Msa0930490:intron | 55.0% | |
| TGCCTGGGGCCATGAATTGT+GGG | + | chr6_2:79600752-79600771 | Msa0930490:intron | 55.0% | |
| TTCCCACAATTCATGGCCCC+AGG | - | chr6_2:79600757-79600776 | None:intergenic | 55.0% | |
| CATGGAGGTTGGGTCAATGG+AGG | - | chr6_2:79600810-79600829 | None:intergenic | 55.0% | |
| GCTGGGTAGAACATGGAGGT+TGG | - | chr6_2:79600821-79600840 | None:intergenic | 55.0% | |
| CCTTGCTGGGTAGAACATGG+AGG | - | chr6_2:79600825-79600844 | None:intergenic | 55.0% | |
| CCTCCATGTTCTACCCAGCA+AGG | + | chr6_2:79600822-79600841 | Msa0930490:intron | 55.0% | |
| CCATGTTCTACCCAGCAAGG+GGG | + | chr6_2:79600825-79600844 | Msa0930490:intron | 55.0% | |
| TTCACCATCTCCCCCTTGCT+GGG | - | chr6_2:79600838-79600857 | None:intergenic | 55.0% | |
| ATCTGCATCCAGGTTGCCAC+AGG | + | chr6_2:79601322-79601341 | Msa0930490:intron | 55.0% | |
| CAACTTGTCCTGTGGCAACC+TGG | - | chr6_2:79601333-79601352 | None:intergenic | 55.0% | |
| !! | AGTGCTGGCAACTTGTCCTG+TGG | - | chr6_2:79601341-79601360 | None:intergenic | 55.0% |
| ACAGGACAAGTTGCCAGCAC+TGG | + | chr6_2:79601340-79601359 | Msa0930490:CDS | 55.0% | |
| AGCAGCTAGAGAAACCTGCG+AGG | - | chr6_2:79601473-79601492 | None:intergenic | 55.0% | |
| ATAGTGCCGCCTTAGGGGAA+AGG | + | chr6_2:79602770-79602789 | Msa0930490:intron | 55.0% | |
| ! | TGCCCTGTTTTCCCTTGAGG+GGG | + | chr6_2:79603275-79603294 | Msa0930490:three_prime_UTR | 55.0% |
| CTTCCCCCTCAAGGGAAAAC+AGG | - | chr6_2:79603281-79603300 | None:intergenic | 55.0% | |
| ! | CTGTTTTCCCTTGAGGGGGA+AGG | + | chr6_2:79603279-79603298 | Msa0930490:three_prime_UTR | 55.0% |
| CTCTACATCCTTCCCCCTCA+AGG | - | chr6_2:79603290-79603309 | None:intergenic | 55.0% | |
| TTGTCGTCGGCGGTGGGAAT+CGG | - | chr6_2:79597034-79597053 | None:intergenic | 60.0% | |
| ACCTTCTTGTCGTCGGCGGT+GGG | - | chr6_2:79597040-79597059 | None:intergenic | 60.0% | |
| ! | CTTCGGCGTCGAAGACGTGT+CGG | + | chr6_2:79597808-79597827 | Msa0930490:intron | 60.0% |
| GGGGAATGGAGCCTTGCTAG+GGG | + | chr6_2:79598596-79598615 | Msa0930490:CDS | 60.0% | |
| AAGGGGGAACCTTGGCGCAA+CGG | + | chr6_2:79599113-79599132 | Msa0930490:intron | 60.0% | |
| GGTGGGGAACCCAGAACTTC+CGG | - | chr6_2:79599652-79599671 | None:intergenic | 60.0% | |
| GACTGCTGCCGTACTTGCCT+GGG | + | chr6_2:79600737-79600756 | Msa0930490:intron | 60.0% | |
| ACTGCTGCCGTACTTGCCTG+GGG | + | chr6_2:79600738-79600757 | Msa0930490:intron | 60.0% | |
| CCCCCTTGCTGGGTAGAACA+TGG | - | chr6_2:79600828-79600847 | None:intergenic | 60.0% | |
| TCTACCCAGCAAGGGGGAGA+TGG | + | chr6_2:79600831-79600850 | Msa0930490:intron | 60.0% | |
| CTTCACCATCTCCCCCTTGC+TGG | - | chr6_2:79600839-79600858 | None:intergenic | 60.0% | |
| GGCGTCACTGAAATCCGCCA+AGG | - | chr6_2:79602409-79602428 | None:intergenic | 60.0% | |
| GGATTAGGGAGGTCATCCGG+TGG | + | chr6_2:79602653-79602672 | Msa0930490:intron | 60.0% | |
| TCCCACCGCCGACGACAAGA+AGG | + | chr6_2:79597036-79597055 | Msa0930490:CDS | 65.0% | |
| GACCTTCTTGTCGTCGGCGG+TGG | - | chr6_2:79597041-79597060 | None:intergenic | 65.0% | |
| ATGGCACCCCAGTCCAAGGC+AGG | - | chr6_2:79599737-79599756 | None:intergenic | 65.0% | |
| GGAGATGGCACCCCAGTCCA+AGG | - | chr6_2:79599741-79599760 | None:intergenic | 65.0% | |
| CGACTGCTGCCGTACTTGCC+TGG | + | chr6_2:79600736-79600755 | Msa0930490:intron | 65.0% | |
| TCGTCGGCGGTGGGAATCGG+TGG | - | chr6_2:79597031-79597050 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 79596900 | 79603560 | 79596900 | ID=Msa0930490;Name=Msa0930490 |
| chr6_2 | mRNA | 79596900 | 79603560 | 79596900 | ID=Msa0930490-mRNA-1;Parent=Msa0930490;Name=Msa0930490-mRNA-1;_AED=0.14;_eAED=0.14;_QI=113|0.88|1|1|0.88|1|10|485|275 |
| chr6_2 | exon | 79596900 | 79597130 | 79596900 | ID=Msa0930490-mRNA-1:exon:13763;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79597237 | 79597318 | 79597237 | ID=Msa0930490-mRNA-1:exon:13764;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79597428 | 79597530 | 79597428 | ID=Msa0930490-mRNA-1:exon:13765;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79598356 | 79598406 | 79598356 | ID=Msa0930490-mRNA-1:exon:13766;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79598567 | 79598632 | 79598567 | ID=Msa0930490-mRNA-1:exon:13767;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79600279 | 79600380 | 79600279 | ID=Msa0930490-mRNA-1:exon:13768;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79601334 | 79601402 | 79601334 | ID=Msa0930490-mRNA-1:exon:13769;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79601478 | 79601561 | 79601478 | ID=Msa0930490-mRNA-1:exon:13770;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79602774 | 79602869 | 79602774 | ID=Msa0930490-mRNA-1:exon:13771;Parent=Msa0930490-mRNA-1 |
| chr6_2 | exon | 79603019 | 79603560 | 79603019 | ID=Msa0930490-mRNA-1:exon:13772;Parent=Msa0930490-mRNA-1 |
| chr6_2 | five_prime_UTR | 79596900 | 79597012 | 79596900 | ID=Msa0930490-mRNA-1:five_prime_utr;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79597013 | 79597130 | 79597013 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79597237 | 79597318 | 79597237 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79597428 | 79597530 | 79597428 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79598356 | 79598406 | 79598356 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79598567 | 79598632 | 79598567 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79600279 | 79600380 | 79600279 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79601334 | 79601402 | 79601334 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79601478 | 79601561 | 79601478 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79602774 | 79602869 | 79602774 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | CDS | 79603019 | 79603075 | 79603019 | ID=Msa0930490-mRNA-1:cds;Parent=Msa0930490-mRNA-1 |
| chr6_2 | three_prime_UTR | 79603076 | 79603560 | 79603076 | ID=Msa0930490-mRNA-1:three_prime_utr;Parent=Msa0930490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
