Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164770 | sp|Q9XIK4|NT101_ARATH | 70.058 | 1032 | 286 | 8 | 1 | 1014 | 1 | 1027 | 0.0 | 1414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164770 | G7LBB9 | 96.696 | 1029 | 22 | 2 | 1 | 1017 | 1 | 1029 | 0.0 | 2044 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015440 | Msa0164770 | 0.826785 | 2.241953e-54 | -8.615850e-47 |
Msa0021220 | Msa0164770 | 0.812602 | 3.902797e-51 | -8.615850e-47 |
Msa0030200 | Msa0164770 | 0.867335 | 1.476021e-65 | -8.615850e-47 |
Msa0044890 | Msa0164770 | 0.820669 | 6.069719e-53 | -8.615850e-47 |
Msa0068970 | Msa0164770 | 0.810072 | 1.382288e-50 | -8.615850e-47 |
Msa0070700 | Msa0164770 | 0.819621 | 1.054812e-52 | -8.615850e-47 |
Msa0115130 | Msa0164770 | 0.840622 | 7.784895e-58 | -8.615850e-47 |
Msa0118590 | Msa0164770 | 0.835635 | 1.495891e-56 | -8.615850e-47 |
Msa0139350 | Msa0164770 | 0.834559 | 2.794805e-56 | -8.615850e-47 |
Msa0141660 | Msa0164770 | 0.828744 | 7.582960e-55 | -8.615850e-47 |
Msa0144370 | Msa0164770 | 0.828343 | 9.476437e-55 | -8.615850e-47 |
Msa0164770 | Msa0170200 | 0.883072 | 6.111736e-71 | -8.615850e-47 |
Msa0164770 | Msa0188440 | 0.879822 | 9.099871e-70 | -8.615850e-47 |
Msa0164770 | Msa0194770 | 0.822002 | 2.990083e-53 | -8.615850e-47 |
Msa0164770 | Msa0195340 | 0.801119 | 1.046633e-48 | -8.615850e-47 |
Msa0164770 | Msa0231030 | 0.861244 | 1.175442e-63 | -8.615850e-47 |
Msa0164770 | Msa0236650 | 0.827926 | 1.194064e-54 | -8.615850e-47 |
Msa0164770 | Msa0270550 | 0.861218 | 1.197451e-63 | -8.615850e-47 |
Msa0164770 | Msa0297630 | 0.850997 | 1.181877e-60 | -8.615850e-47 |
Msa0164770 | Msa0335730 | 0.812035 | 5.191426e-51 | -8.615850e-47 |
Msa0164770 | Msa0343620 | 0.815318 | 9.830026e-52 | -8.615850e-47 |
Msa0164770 | Msa0360310 | 0.803818 | 2.907392e-49 | -8.615850e-47 |
Msa0164770 | Msa0375310 | 0.829031 | 6.463016e-55 | -8.615850e-47 |
Msa0164770 | Msa0411420 | 0.809482 | 1.851701e-50 | -8.615850e-47 |
Msa0164770 | Msa0421500 | 0.833330 | 5.672658e-56 | -8.615850e-47 |
Msa0164770 | Msa0428060 | 0.804468 | 2.129481e-49 | -8.615850e-47 |
Msa0164770 | Msa0450710 | 0.800610 | 1.329605e-48 | -8.615850e-47 |
Msa0164770 | Msa0482200 | 0.844530 | 7.141573e-59 | -8.615850e-47 |
Msa0164770 | Msa0485510 | 0.896364 | 3.959536e-76 | -8.615850e-47 |
Msa0164770 | Msa0486070 | 0.841711 | 4.026063e-58 | -8.615850e-47 |
Msa0164770 | Msa0513990 | 0.814439 | 1.539813e-51 | -8.615850e-47 |
Msa0164770 | Msa0573140 | 0.822168 | 2.736519e-53 | -8.615850e-47 |
Msa0164770 | Msa0573270 | 0.803768 | 2.977022e-49 | -8.615850e-47 |
Msa0164770 | Msa0648780 | 0.828703 | 7.757970e-55 | -8.615850e-47 |
Msa0164770 | Msa0651800 | 0.803198 | 3.908863e-49 | -8.615850e-47 |
Msa0164770 | Msa0659050 | 0.943575 | 9.395890e-103 | -8.615850e-47 |
Msa0164770 | Msa0660850 | 0.878957 | 1.843326e-69 | -8.615850e-47 |
Msa0164770 | Msa0687440 | 0.867859 | 1.003029e-65 | -8.615850e-47 |
Msa0164770 | Msa0694300 | 0.812460 | 4.192154e-51 | -8.615850e-47 |
Msa0164770 | Msa0704980 | 0.963817 | 1.494011e-122 | -8.615850e-47 |
Msa0164770 | Msa0709730 | 0.819418 | 1.173749e-52 | -8.615850e-47 |
Msa0164770 | Msa0745740 | 0.888511 | 5.532100e-73 | -8.615850e-47 |
Msa0164770 | Msa0755700 | 0.867972 | 9.222587e-66 | -8.615850e-47 |
Msa0164770 | Msa0757940 | 0.877379 | 6.587791e-69 | -8.615850e-47 |
Msa0164770 | Msa0772510 | 0.802246 | 6.145587e-49 | -8.615850e-47 |
Msa0164770 | Msa0799260 | 0.883607 | 3.888043e-71 | -8.615850e-47 |
Msa0164770 | Msa0799310 | 0.885616 | 6.973672e-72 | -8.615850e-47 |
Msa0164770 | Msa0826990 | 0.881560 | 2.168062e-70 | -8.615850e-47 |
Msa0164770 | Msa0837020 | 0.809678 | 1.680248e-50 | -8.615850e-47 |
Msa0164770 | Msa0837630 | 0.838304 | 3.113051e-57 | -8.615850e-47 |
Msa0164770 | Msa0862530 | 0.827614 | 1.419489e-54 | -8.615850e-47 |
Msa0164770 | Msa0879540 | 0.825706 | 4.050753e-54 | -8.615850e-47 |
Msa0164770 | Msa0882580 | 0.809343 | 1.982771e-50 | -8.615850e-47 |
Msa0164770 | Msa0909950 | 0.822089 | 2.855115e-53 | -8.615850e-47 |
Msa0164770 | Msa0930490 | 0.831126 | 1.992340e-55 | -8.615850e-47 |
Msa0164770 | Msa0966210 | 0.814474 | 1.512477e-51 | -8.615850e-47 |
Msa0164770 | Msa0970920 | 0.827173 | 1.810873e-54 | -8.615850e-47 |
Msa0164770 | Msa1025460 | 0.816373 | 5.716985e-52 | -8.615850e-47 |
Msa0164770 | Msa1027640 | 0.830761 | 2.447916e-55 | -8.615850e-47 |
Msa0164770 | Msa1066190 | 0.851221 | 1.022112e-60 | -8.615850e-47 |
Msa0164770 | Msa1083970 | 0.836220 | 1.063161e-56 | -8.615850e-47 |
Msa0164770 | Msa1129480 | 0.812520 | 4.069113e-51 | -8.615850e-47 |
Msa0164770 | Msa1153060 | 0.856760 | 2.587985e-62 | -8.615850e-47 |
Msa0164770 | Msa1174470 | 0.813564 | 2.401670e-51 | -8.615850e-47 |
Msa0164770 | Msa1191830 | 0.865426 | 5.958559e-65 | -8.615850e-47 |
Msa0164770 | Msa1209850 | 0.841108 | 5.801541e-58 | -8.615850e-47 |
Msa0164770 | Msa1211820 | 0.830159 | 3.434822e-55 | -8.615850e-47 |
Msa0164770 | Msa1218110 | 0.829570 | 4.780821e-55 | -8.615850e-47 |
Msa0164770 | Msa1225720 | 0.892933 | 1.004256e-74 | -8.615850e-47 |
Msa0164770 | Msa1258390 | 0.893951 | 3.893723e-75 | -8.615850e-47 |
Msa0164770 | Msa1266990 | 0.813547 | 2.421669e-51 | -8.615850e-47 |
Msa0164770 | Msa1314260 | 0.817572 | 3.075381e-52 | -8.615850e-47 |
Msa0164770 | Msa1330560 | 0.865894 | 4.239124e-65 | -8.615850e-47 |
Msa0164770 | Msa1341130 | 0.806924 | 6.494541e-50 | -8.615850e-47 |
Msa0164770 | Msa1356400 | 0.850014 | 2.233150e-60 | -8.615850e-47 |
Msa0164770 | Msa1370450 | 0.803352 | 3.632111e-49 | -8.615850e-47 |
Msa0164770 | Msa1382140 | 0.817934 | 2.548787e-52 | -8.615850e-47 |
Msa0164770 | Msa1383960 | 0.807460 | 4.999902e-50 | -8.615850e-47 |
Msa0164770 | Msa1384880 | 0.806523 | 7.892241e-50 | -8.615850e-47 |
Msa0164770 | Msa1418690 | 0.863481 | 2.413679e-64 | -8.615850e-47 |
Msa0164770 | Msa1418760 | 0.800177 | 1.628886e-48 | -8.615850e-47 |
Msa0164770 | Msa1433590 | 0.803667 | 3.125214e-49 | -8.615850e-47 |
Msa0164770 | Msa1444240 | 0.865210 | 6.964701e-65 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164770 | MtrunA17_Chr8g0383301 | 96.696 | 1029 | 22 | 2 | 1 | 1017 | 1 | 1029 | 0.0 | 2044 |
Msa0164770 | MtrunA17_Chr2g0291101 | 77.526 | 663 | 116 | 4 | 1 | 633 | 1 | 660 | 0.0 | 1031 |
Msa0164770 | MtrunA17_Chr2g0291091 | 63.325 | 379 | 111 | 6 | 646 | 1014 | 2 | 362 | 1.23e-155 | 464 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0164770 | AT1G10490.1 | 70.058 | 1032 | 286 | 8 | 1 | 1014 | 1 | 1027 | 0.0 | 1414 |
Msa0164770 | AT1G10490.2 | 70.058 | 1032 | 286 | 8 | 1 | 1014 | 1 | 1027 | 0.0 | 1414 |
Msa0164770 | AT3G57940.1 | 68.972 | 1012 | 287 | 8 | 1 | 996 | 1 | 1001 | 0.0 | 1360 |
Msa0164770 | AT3G57940.2 | 68.676 | 1012 | 285 | 9 | 1 | 996 | 1 | 996 | 0.0 | 1347 |
Find 250 sgRNAs with CRISPR-Local
Find 827 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTTCCTTGATGCAATTT+TGG | 0.109454 | 1_4:-44551607 | Msa0164770:CDS |
AAGCTTGAAGTTAGGGTTTA+TGG | 0.119849 | 1_4:+44554177 | None:intergenic |
TGGTATAACCTGCTAATATT+AGG | 0.153603 | 1_4:+44549160 | None:intergenic |
GCTTTCGCAAGTTGAATTAT+TGG | 0.181367 | 1_4:-44550215 | Msa0164770:CDS |
TTCCTGTCTTCCACTGTTAA+TGG | 0.209425 | 1_4:-44550127 | Msa0164770:CDS |
CATCATTATTCAAGGGTTTC+AGG | 0.210462 | 1_4:+44545440 | None:intergenic |
CCTTACAACAGTAGCATTCT+TGG | 0.213127 | 1_4:+44550439 | None:intergenic |
GTCTTTGCTTGGCCCATATC+TGG | 0.233387 | 1_4:-44550152 | Msa0164770:CDS |
AATGACGACCCAGGGTCTTT+TGG | 0.257695 | 1_4:-44553463 | Msa0164770:intron |
CCGTGGACCTCTTTCGCTTT+TGG | 0.262875 | 1_4:-44545640 | Msa0164770:CDS |
TCTCCTTGTCTTGCTCTTGA+TGG | 0.265153 | 1_4:-44542804 | Msa0164770:three_prime_UTR |
AATATTGTCTCTATTTATAA+AGG | 0.271442 | 1_4:-44543693 | Msa0164770:CDS |
CGATCCATGTTTGTCATTAT+CGG | 0.274182 | 1_4:-44553973 | Msa0164770:CDS |
AAGCATTCTGAAAGAGTTCT+TGG | 0.279878 | 1_4:-44553375 | Msa0164770:CDS |
GCAAAGATTTGCTAAACTTC+TGG | 0.287441 | 1_4:-44545267 | Msa0164770:CDS |
CTTAGGAAACAAATTTGATT+TGG | 0.300207 | 1_4:-44542607 | Msa0164770:three_prime_UTR |
GGTATAACCTGCTAATATTA+GGG | 0.307074 | 1_4:+44549161 | None:intergenic |
CTTCGGGATGTGTGTTCTTC+AGG | 0.309009 | 1_4:-44553346 | Msa0164770:intron |
CATGACCACGCATGCCTTAC+AGG | 0.309529 | 1_4:+44552861 | None:intergenic |
ATCAGAACTCTCATTGAAAA+TGG | 0.315497 | 1_4:-44554012 | Msa0164770:CDS |
TTCTGCAATGCTTCTTCTCT+CGG | 0.319368 | 1_4:+44542933 | None:intergenic |
TTATTTCCAAGATAGTTCTT+AGG | 0.319812 | 1_4:-44542624 | Msa0164770:three_prime_UTR |
CAGCCATAAATCAAGTAAAA+AGG | 0.320830 | 1_4:-44542973 | Msa0164770:CDS |
GACCTTATGTGAGATGAAAT+TGG | 0.324806 | 1_4:+44552817 | None:intergenic |
GCATACCGCTGGAGCAATTC+AGG | 0.326482 | 1_4:+44543155 | None:intergenic |
TTGTCAGCAGTTGTCTTGAT+AGG | 0.327701 | 1_4:+44544883 | None:intergenic |
CAAATGAGGAAGATCTGTTC+TGG | 0.328217 | 1_4:+44545727 | None:intergenic |
GGGACTATCAGAAGCTTATC+AGG | 0.328308 | 1_4:-44551828 | Msa0164770:CDS |
TTCTGTTTAACAGGGACAAA+TGG | 0.330082 | 1_4:-44543732 | Msa0164770:intron |
TCCTGTCTTCCACTGTTAAT+GGG | 0.334912 | 1_4:-44550126 | Msa0164770:intron |
GCTCTTGGTTTATCAATTGC+TGG | 0.336205 | 1_4:-44551525 | Msa0164770:CDS |
TTGTTTCCTAAGAACTATCT+TGG | 0.339810 | 1_4:+44542618 | None:intergenic |
TTGTTCGCTGCTCGTGGCCG+TGG | 0.342740 | 1_4:-44551558 | Msa0164770:CDS |
CACCACTTATTTGTGCTACT+TGG | 0.343869 | 1_4:-44548803 | Msa0164770:intron |
ATAGTTCTTGCTAGTAGATT+AGG | 0.345177 | 1_4:+44553206 | None:intergenic |
GAGTTCTTGGCAACACCTTC+GGG | 0.345741 | 1_4:-44553362 | Msa0164770:CDS |
AAACTTAAAGAGGAACTAAA+TGG | 0.347516 | 1_4:-44551797 | Msa0164770:CDS |
GCCATCAATTGCAGATCATT+TGG | 0.348357 | 1_4:+44548839 | None:intergenic |
GACAATGCCTTGCAAAATAC+TGG | 0.353277 | 1_4:-44543107 | Msa0164770:CDS |
CCGTGCTCTTAGCAGACATT+TGG | 0.355236 | 1_4:+44549861 | None:intergenic |
CATTATCTCGGCGTCTCCTT+TGG | 0.356220 | 1_4:-44545668 | Msa0164770:CDS |
TATTCACAGGTTTGCCTTGA+GGG | 0.360429 | 1_4:-44548459 | Msa0164770:intron |
TTCCGTATCAGTGGTCCAAC+AGG | 0.360939 | 1_4:+44551767 | None:intergenic |
GAAGACAGGAAGACCAGATA+TGG | 0.361242 | 1_4:+44550139 | None:intergenic |
GATGACCATGGCTCAAACTT+TGG | 0.365532 | 1_4:+44548412 | None:intergenic |
AGAGTTCTTGGCAACACCTT+CGG | 0.367420 | 1_4:-44553363 | Msa0164770:CDS |
GGCTTCCACTTTCCGTGGCA+TGG | 0.373750 | 1_4:-44545246 | Msa0164770:CDS |
TCTTGCTCTTGATGGCTTAG+TGG | 0.377559 | 1_4:-44542796 | Msa0164770:three_prime_UTR |
GCGTTAAGCCAGCTTTCAAT+AGG | 0.380422 | 1_4:+44549214 | None:intergenic |
TGCAAGATCAGATGCTATAT+TGG | 0.380445 | 1_4:-44542828 | Msa0164770:three_prime_UTR |
AACGGCAGAAGCTTGAAGTT+AGG | 0.382548 | 1_4:+44554169 | None:intergenic |
TCCAAATGATCTGCAATTGA+TGG | 0.389508 | 1_4:-44548840 | Msa0164770:CDS |
AATAAAGCTTAACTGGAATC+TGG | 0.390038 | 1_4:+44545585 | None:intergenic |
AACAAGGATACCTCTTCAAC+AGG | 0.390312 | 1_4:+44552781 | None:intergenic |
CCGAGATAATGGAGCTTCTC+CGG | 0.393175 | 1_4:+44545680 | None:intergenic |
TTCAATTTCATCATTATTCA+AGG | 0.394125 | 1_4:+44545432 | None:intergenic |
TATAGATCACACTCACTTGC+TGG | 0.394267 | 1_4:+44549054 | None:intergenic |
TCTACATGGTCTTGCATTCA+AGG | 0.399145 | 1_4:-44543648 | Msa0164770:CDS |
CAATCTTGCTGACTTTCATC+TGG | 0.401834 | 1_4:-44544794 | Msa0164770:intron |
CAAAGGAGACGCCGAGATAA+TGG | 0.404698 | 1_4:+44545669 | None:intergenic |
CGTGGGAAATCAGCTGCTCT+TGG | 0.405723 | 1_4:-44551540 | Msa0164770:CDS |
TCTGTTTAACAGGGACAAAT+GGG | 0.420355 | 1_4:-44543731 | Msa0164770:intron |
GTGATCTATACTATGTCAAT+CGG | 0.421633 | 1_4:-44549041 | Msa0164770:CDS |
CTGCACAGGTCTGCAGAATC+AGG | 0.422621 | 1_4:-44544131 | Msa0164770:CDS |
TGGATGACACACAAAATATC+AGG | 0.423019 | 1_4:+44548670 | None:intergenic |
ACGGCAGAAGCTTGAAGTTA+GGG | 0.426254 | 1_4:+44554170 | None:intergenic |
TGAGCATGTGATAATGTAAC+TGG | 0.428130 | 1_4:+44544169 | None:intergenic |
TACCAATTTCATCTCACATA+AGG | 0.428327 | 1_4:-44552819 | Msa0164770:CDS |
GATACCTCTTCAACAGGAAC+TGG | 0.435352 | 1_4:+44552787 | None:intergenic |
TTGAAAATGGCGTCAAATCA+AGG | 0.436134 | 1_4:-44553999 | Msa0164770:CDS |
CAATGTGGGCATGTACTTTG+CGG | 0.440202 | 1_4:+44542869 | None:intergenic |
GCATCACAGACAGACCATTC+AGG | 0.441433 | 1_4:-44550402 | Msa0164770:intron |
GAACAAGTCATTCCGATGTC+AGG | 0.444210 | 1_4:-44542913 | Msa0164770:three_prime_UTR |
GAATCCCACTCTCAGGCTAC+AGG | 0.446778 | 1_4:-44552919 | Msa0164770:CDS |
CGGTGACAAATCCCGTGATC+AGG | 0.453225 | 1_4:-44553953 | Msa0164770:intron |
CATCACCATCGTGTACAAAC+TGG | 0.454198 | 1_4:+44553124 | None:intergenic |
CCTTCGTTCCAGACAAAATG+AGG | 0.456438 | 1_4:-44554053 | Msa0164770:intron |
GCGATAATGAGAGACCTTGT+TGG | 0.458934 | 1_4:+44554140 | None:intergenic |
GTTGATGAAACAAATCAGTT+CGG | 0.459835 | 1_4:-44545409 | Msa0164770:intron |
GAAAATGCATCGGCTTTCTC+AGG | 0.464462 | 1_4:+44553438 | None:intergenic |
AAATTTGCTCCTTTCTACAT+TGG | 0.466347 | 1_4:-44545608 | Msa0164770:CDS |
GCTTCTTCCAAAAGCGAAAG+AGG | 0.467655 | 1_4:+44545633 | None:intergenic |
TGTATTCTTACAGCGGATGA+TGG | 0.469788 | 1_4:-44548894 | Msa0164770:intron |
CAGCGGTATGCCTTTGAAGA+TGG | 0.471481 | 1_4:-44543143 | Msa0164770:CDS |
ATGTCAGGCATTGTTGGTCC+TGG | 0.472686 | 1_4:-44542898 | Msa0164770:three_prime_UTR |
AGGTTTGTTGATATAATTGA+TGG | 0.472754 | 1_4:-44553609 | Msa0164770:CDS |
AGGAAAAGCTTGAACTAAGC+AGG | 0.472967 | 1_4:-44553629 | Msa0164770:CDS |
CTGTAAGGCATGCGTGGTCA+TGG | 0.476362 | 1_4:-44552860 | Msa0164770:CDS |
AGCACAAATAAGTGGTGTGC+TGG | 0.479388 | 1_4:+44548809 | None:intergenic |
CTATTCACAGGTTTGCCTTG+AGG | 0.480472 | 1_4:-44548460 | Msa0164770:intron |
ATTGCTGGTGCTATTGCTGC+CGG | 0.480813 | 1_4:-44551510 | Msa0164770:CDS |
ATGCAAAGTTATGAAGGAAC+TGG | 0.481979 | 1_4:-44549929 | Msa0164770:intron |
CCAAGAATGCTACTGTTGTA+AGG | 0.489834 | 1_4:-44550439 | Msa0164770:CDS |
ACATGCCCACATTGAAGAAA+GGG | 0.490113 | 1_4:-44542860 | Msa0164770:three_prime_UTR |
AAATGAGGAAGATCTGTTCT+GGG | 0.490856 | 1_4:+44545728 | None:intergenic |
CCAACAGTGAAGTCTTTGCT+TGG | 0.491005 | 1_4:-44550163 | Msa0164770:CDS |
CGAGATAATGGAGCTTCTCC+GGG | 0.491889 | 1_4:+44545681 | None:intergenic |
TGCTAGTACATCTGCGTGAA+AGG | 0.492280 | 1_4:-44545706 | Msa0164770:CDS |
TACATGCCCACATTGAAGAA+AGG | 0.495323 | 1_4:-44542861 | Msa0164770:three_prime_UTR |
CTTTGTTACTGCACCCAGTC+CGG | 0.496279 | 1_4:-44551386 | Msa0164770:CDS |
TTGTTTGAGTTTATATGCAA+AGG | 0.497050 | 1_4:-44551349 | Msa0164770:CDS |
ACTATCAATTGCCTCCTGTA+AGG | 0.497278 | 1_4:-44552875 | Msa0164770:CDS |
TGTTCGCTGCTCGTGGCCGT+GGG | 0.501663 | 1_4:-44551557 | Msa0164770:CDS |
TGTTTGAGTTTATATGCAAA+GGG | 0.501745 | 1_4:-44551348 | Msa0164770:CDS |
ACCCATTAACAGTGGAAGAC+AGG | 0.504081 | 1_4:+44550125 | None:intergenic |
TGAAGTTAGGGTTTATGGAG+GGG | 0.504525 | 1_4:+44554182 | None:intergenic |
GCTAAGAGCACGGAGGGTGC+AGG | 0.504530 | 1_4:-44549851 | Msa0164770:intron |
TGATTCTTCGATTCATCCAC+CGG | 0.505238 | 1_4:+44548697 | None:intergenic |
CTGGGGATCCTATTGAAAGC+TGG | 0.505620 | 1_4:-44549222 | Msa0164770:CDS |
AGACCTTGTTGGAGTGAAAA+CGG | 0.506604 | 1_4:+44554151 | None:intergenic |
TTTCATTGTTTATGATAGGC+GGG | 0.509198 | 1_4:-44553419 | Msa0164770:CDS |
CGCAGATGTACTAGCAAATG+AGG | 0.511263 | 1_4:+44545713 | None:intergenic |
GCTTGTGTGTTACTCTGCAC+AGG | 0.520610 | 1_4:-44544145 | Msa0164770:CDS |
TCCCTGTTGGACCACTGATA+CGG | 0.521720 | 1_4:-44551769 | Msa0164770:CDS |
CCGGAGAAGCTCCATTATCT+CGG | 0.521760 | 1_4:-44545680 | Msa0164770:CDS |
TTGTCAGTATAAAATCGAAC+CGG | 0.524708 | 1_4:-44543061 | Msa0164770:CDS |
GTATTCCATGCCACGGAAAG+TGG | 0.525307 | 1_4:+44545241 | None:intergenic |
ATTCCGATGTCAGGCATTGT+TGG | 0.526299 | 1_4:-44542904 | Msa0164770:three_prime_UTR |
AGCGAAAGAGGTCCACGGTT+AGG | 0.528419 | 1_4:+44545645 | None:intergenic |
TCGAACTGAATCCCACTCTC+AGG | 0.529910 | 1_4:-44552926 | Msa0164770:CDS |
TACATCTTTCAGCCGTGGCA+TGG | 0.532959 | 1_4:+44543613 | None:intergenic |
TGGCAATGAACTTACCTGAA+TGG | 0.533576 | 1_4:+44550388 | None:intergenic |
AGGGACAAATGGGGTTGGAA+AGG | 0.535630 | 1_4:-44543721 | Msa0164770:CDS |
GGAACCTCTTAGTGTTTCTG+TGG | 0.536334 | 1_4:-44543370 | Msa0164770:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 1_4:+44545599 | None:intergenic |
ATGCCATCCCTAATATTAGC+AGG | 0.538179 | 1_4:-44549168 | Msa0164770:intron |
CTAAATGGAGATTTCCCTGT+TGG | 0.538752 | 1_4:-44551782 | Msa0164770:CDS |
TCTTGTCCAAAATTGCATCA+AGG | 0.540070 | 1_4:+44551601 | None:intergenic |
AGTTACAGAAGCTGCAGAGA+AGG | 0.540274 | 1_4:-44546655 | Msa0164770:intron |
ATAGAGACAGTGGAAGGAGG+AGG | 0.542491 | 1_4:-44553185 | Msa0164770:CDS |
CACACATCCTAGTGCAATGA+GGG | 0.543166 | 1_4:-44548295 | Msa0164770:intron |
TCAGGACATTTCACACATTG+AGG | 0.543421 | 1_4:-44544113 | Msa0164770:intron |
TAAACCAGTTCCTGTTGAAG+AGG | 0.545632 | 1_4:-44552791 | Msa0164770:intron |
AATATAGTTCCTCCACCAAA+GGG | 0.547045 | 1_4:+44542662 | None:intergenic |
TAATATAGTTCCTCCACCAA+AGG | 0.547315 | 1_4:+44542661 | None:intergenic |
GCTTCTGTAACTGTAATTTG+TGG | 0.547860 | 1_4:+44546666 | None:intergenic |
GTTTGATGTACTTGAATACA+AGG | 0.548311 | 1_4:-44551326 | Msa0164770:intron |
AATTGATGGTTGGAATGAAT+CGG | 0.550164 | 1_4:-44553595 | Msa0164770:intron |
TCAATTTCATCATTATTCAA+GGG | 0.550319 | 1_4:+44545433 | None:intergenic |
GCAAGGCTCAAATCAAATCA+AGG | 0.550985 | 1_4:-44553674 | Msa0164770:CDS |
TTGAAGTTAGGGTTTATGGA+GGG | 0.551143 | 1_4:+44554181 | None:intergenic |
TGGATGAAGACCTCAACGAT+GGG | 0.551646 | 1_4:-44543350 | Msa0164770:CDS |
TGAGAATGATGTTGACGATA+AGG | 0.553110 | 1_4:-44546697 | Msa0164770:CDS |
TGTACTTTGCGGTATTAACC+AGG | 0.553980 | 1_4:+44542880 | None:intergenic |
CTTGAAGTTAGGGTTTATGG+AGG | 0.554138 | 1_4:+44554180 | None:intergenic |
TTGCTGGTGCTATTGCTGCC+GGG | 0.554680 | 1_4:-44551509 | Msa0164770:intron |
CTTCTGGCTTCCACTTTCCG+TGG | 0.555143 | 1_4:-44545251 | Msa0164770:CDS |
ACGGCCACGAGCAGCGAACA+AGG | 0.556001 | 1_4:+44551560 | None:intergenic |
TGATCTATACTATGTCAATC+GGG | 0.556230 | 1_4:-44549040 | Msa0164770:CDS |
CAGCTTTCAATAGGATCCCC+AGG | 0.557416 | 1_4:+44549223 | None:intergenic |
ACTGTCTGCAGTTATTATGA+AGG | 0.559735 | 1_4:-44546738 | Msa0164770:intron |
TACCAAGTAGCACAAATAAG+TGG | 0.562485 | 1_4:+44548801 | None:intergenic |
AAAGACTTCACTGTTGGCAG+TGG | 0.564718 | 1_4:+44550169 | None:intergenic |
TCTTCATTATATGCTTAGCA+AGG | 0.565411 | 1_4:-44553691 | Msa0164770:CDS |
CATCTTCAAAGGCATACCGC+TGG | 0.566759 | 1_4:+44543144 | None:intergenic |
TTCATTGTTTATGATAGGCG+GGG | 0.569131 | 1_4:-44553418 | Msa0164770:CDS |
CCAAGCAAAGACTTCACTGT+TGG | 0.571135 | 1_4:+44550163 | None:intergenic |
GCTAGATTCTCCATCTTCAA+AGG | 0.571573 | 1_4:+44543133 | None:intergenic |
GAGGGGTTTACGTCACCGCT+AGG | 0.572075 | 1_4:+44554199 | None:intergenic |
TACTGTATAGGACGATATGA+AGG | 0.574051 | 1_4:-44543201 | Msa0164770:intron |
TTAACAGGGACAAATGGGGT+TGG | 0.574911 | 1_4:-44543726 | Msa0164770:intron |
GAGGTCCACGGTTAGGCCAA+AGG | 0.575632 | 1_4:+44545652 | None:intergenic |
GAATCCATCAGATATGCTCC+TGG | 0.578441 | 1_4:-44549241 | Msa0164770:CDS |
AAGTACAGGTGCGAAAGTGC+AGG | 0.580964 | 1_4:+44544205 | None:intergenic |
TCCAGACAAAATGAGGAAGA+AGG | 0.581483 | 1_4:-44554046 | Msa0164770:intron |
TTGTTGATATAATTGATGGT+TGG | 0.581676 | 1_4:-44553605 | Msa0164770:CDS |
CATAAACAATGAAAATGCAT+CGG | 0.584102 | 1_4:+44553428 | None:intergenic |
CATGGTATTTGATCTCCACA+AGG | 0.584673 | 1_4:+44548387 | None:intergenic |
TATACTGACAAGACCACCTG+TGG | 0.585384 | 1_4:+44543073 | None:intergenic |
ATTCACAGGTTTGCCTTGAG+GGG | 0.585666 | 1_4:-44548458 | Msa0164770:intron |
AATCCATCAGATATGCTCCT+GGG | 0.586271 | 1_4:-44549240 | Msa0164770:CDS |
GAAGTGCTCCACGTTGGACC+AGG | 0.586370 | 1_4:-44551747 | Msa0164770:intron |
GAAGTTACCCTCATTGCACT+AGG | 0.587370 | 1_4:+44548288 | None:intergenic |
GTTGCCTTGTTCGCTGCTCG+TGG | 0.587390 | 1_4:-44551564 | Msa0164770:CDS |
TTAAAGTCTGAAAACGAGCA+TGG | 0.587411 | 1_4:-44543035 | Msa0164770:CDS |
ACATCTGCGTGAAAGGCGCC+CGG | 0.587670 | 1_4:-44545699 | Msa0164770:CDS |
AACGCCCTGTAGCCTGAGAG+TGG | 0.588671 | 1_4:+44552914 | None:intergenic |
AAGACAGGAAGACCAGATAT+GGG | 0.589306 | 1_4:+44550140 | None:intergenic |
AGCAAGAACTATAGAGACAG+TGG | 0.589349 | 1_4:-44553195 | Msa0164770:CDS |
CGATGGGGCTAAACAAGTTG+AGG | 0.590660 | 1_4:-44543334 | Msa0164770:intron |
ACCTGATAGAATAACGTGAC+TGG | 0.590808 | 1_4:-44545481 | Msa0164770:intron |
TGCCTCCTGTAAGGCATGCG+TGG | 0.591653 | 1_4:-44552866 | Msa0164770:CDS |
AGCCATGGTCATCAACCTTG+TGG | 0.591954 | 1_4:-44548402 | Msa0164770:CDS |
ATAAAACGATACCTGATCAC+GGG | 0.592447 | 1_4:+44553942 | None:intergenic |
ATCCCCAGGAGCATATCTGA+TGG | 0.593961 | 1_4:+44549237 | None:intergenic |
TAATTCACTATCCTTGTGGT+AGG | 0.594044 | 1_4:+44549005 | None:intergenic |
TTGTAACACCATAAAACAGT+TGG | 0.597418 | 1_4:+44553651 | None:intergenic |
ACTATAGAGACAGTGGAAGG+AGG | 0.598245 | 1_4:-44553188 | Msa0164770:CDS |
AACTGCTCACAAAATTTCCA+TGG | 0.599225 | 1_4:+44548369 | None:intergenic |
AAAATAATTCACTATCCTTG+TGG | 0.600381 | 1_4:+44549001 | None:intergenic |
ATGTCTGCTAAGAGCACGGA+GGG | 0.601997 | 1_4:-44549857 | Msa0164770:CDS |
AAATTCTACAAATATCTACA+TGG | 0.602639 | 1_4:-44543662 | Msa0164770:CDS |
TCATTGTTTATGATAGGCGG+GGG | 0.603523 | 1_4:-44553417 | Msa0164770:CDS |
TATAAAACGATACCTGATCA+CGG | 0.604633 | 1_4:+44553941 | None:intergenic |
GACGAGATATCTGCCCCTCA+AGG | 0.606609 | 1_4:+44548445 | None:intergenic |
TAACCTGCTAATATTAGGGA+TGG | 0.607113 | 1_4:+44549165 | None:intergenic |
GGAGCTGAAGAAACTTAAAG+AGG | 0.607451 | 1_4:-44551807 | Msa0164770:CDS |
TCATCCACAGAAACACTAAG+AGG | 0.607502 | 1_4:+44543366 | None:intergenic |
ATTGATGCTGCAGGACTCAG+AGG | 0.608719 | 1_4:-44551849 | Msa0164770:intron |
GACTGGCGAGCATTCATGCA+TGG | 0.609058 | 1_4:-44545464 | Msa0164770:CDS |
TAGAGACAGTGGAAGGAGGA+GGG | 0.610550 | 1_4:-44553184 | Msa0164770:CDS |
CCAAATGTCTGCTAAGAGCA+CGG | 0.613472 | 1_4:-44549861 | Msa0164770:CDS |
TAACTTACATCTTTCAGCCG+TGG | 0.614000 | 1_4:+44543608 | None:intergenic |
CCACACATCCTAGTGCAATG+AGG | 0.617308 | 1_4:-44548296 | Msa0164770:CDS |
TGGAATACAAGCTTGCTATG+AGG | 0.617987 | 1_4:-44545226 | Msa0164770:intron |
AATCCCACTCTCAGGCTACA+GGG | 0.620518 | 1_4:-44552918 | Msa0164770:CDS |
GTGGAGCACTTCCGTATCAG+TGG | 0.623640 | 1_4:+44551758 | None:intergenic |
ATGCGAGCTCCTGAAAGTGA+AGG | 0.624310 | 1_4:+44548330 | None:intergenic |
CAGTTTGTACACGATGGTGA+TGG | 0.626116 | 1_4:-44553123 | Msa0164770:intron |
CAAGCTTGTATTCCATGCCA+CGG | 0.626773 | 1_4:+44545234 | None:intergenic |
AGACAAAATGAGGAAGAAGG+TGG | 0.627687 | 1_4:-44554043 | Msa0164770:exon |
CGTCTCCTTTGGCCTAACCG+TGG | 0.629616 | 1_4:-44545657 | Msa0164770:CDS |
GTGGATGAAGACCTCAACGA+TGG | 0.630682 | 1_4:-44543351 | Msa0164770:CDS |
GCTATCCAAAGTTTGAGCCA+TGG | 0.630986 | 1_4:-44548417 | Msa0164770:CDS |
CCTCATTGCACTAGGATGTG+TGG | 0.631104 | 1_4:+44548296 | None:intergenic |
TATTTGTATGACAGGACCGG+TGG | 0.632393 | 1_4:-44548713 | Msa0164770:intron |
ACGCCCTGTAGCCTGAGAGT+GGG | 0.637356 | 1_4:+44552915 | None:intergenic |
GGACCAACAATGCCTGACAT+CGG | 0.637446 | 1_4:+44542901 | None:intergenic |
CTCCACAAGGTTGATGACCA+TGG | 0.637837 | 1_4:+44548400 | None:intergenic |
CTTGTTTAGCCCCATCGTTG+AGG | 0.638898 | 1_4:+44543340 | None:intergenic |
CTGTTTAACAGGGACAAATG+GGG | 0.641129 | 1_4:-44543730 | Msa0164770:intron |
ATTCAGTTCGAAATCTGTCG+TGG | 0.643656 | 1_4:+44552938 | None:intergenic |
TTTGCATATAAACTCAAACA+AGG | 0.644235 | 1_4:+44551351 | None:intergenic |
CTTGTGGAGATCAAATACCA+TGG | 0.649950 | 1_4:-44548386 | Msa0164770:CDS |
AGATCGAATCAACCATGCCA+CGG | 0.650410 | 1_4:-44543625 | Msa0164770:CDS |
TCACTCCTGAATTGCTCCAG+CGG | 0.651035 | 1_4:-44543160 | Msa0164770:CDS |
CAAGAGCAGCTGATTTCCCA+CGG | 0.651139 | 1_4:+44551541 | None:intergenic |
TTGATGCTGCAGGACTCAGA+GGG | 0.654423 | 1_4:-44551848 | Msa0164770:intron |
AGAACTATAGAGACAGTGGA+AGG | 0.654646 | 1_4:-44553191 | Msa0164770:CDS |
GTCACCGATAATGACAAACA+TGG | 0.659550 | 1_4:+44553969 | None:intergenic |
TCTAGTCGCTTCATATCATG+TGG | 0.661842 | 1_4:+44544829 | None:intergenic |
TCCGTATCAGTGGTCCAACA+GGG | 0.663742 | 1_4:+44551768 | None:intergenic |
ATCCATCAGATATGCTCCTG+GGG | 0.663879 | 1_4:-44549239 | Msa0164770:CDS |
CATGCCCACATTGAAGAAAG+GGG | 0.663959 | 1_4:-44542859 | Msa0164770:three_prime_UTR |
ACATGATATGAAGCGACTAG+AGG | 0.666290 | 1_4:-44544827 | Msa0164770:CDS |
AATGCCTTGCAAAATACTGG+TGG | 0.667743 | 1_4:-44543104 | Msa0164770:CDS |
CCAAAAGCGAAAGAGGTCCA+CGG | 0.671055 | 1_4:+44545640 | None:intergenic |
GATACGGAAGTGCTCCACGT+TGG | 0.671677 | 1_4:-44551753 | Msa0164770:CDS |
CTGAAGAACACACATCCCGA+AGG | 0.674615 | 1_4:+44553347 | None:intergenic |
AAGCCATCAAGAGCAAGACA+AGG | 0.682260 | 1_4:+44542801 | None:intergenic |
ATGCCCACATTGAAGAAAGG+GGG | 0.685877 | 1_4:-44542858 | Msa0164770:three_prime_UTR |
AGATCACACTCACTTGCTGG+AGG | 0.685877 | 1_4:+44549057 | None:intergenic |
ATACTGACAAGACCACCTGT+GGG | 0.694097 | 1_4:+44543074 | None:intergenic |
GCTAACCAGTTTGTACACGA+TGG | 0.697246 | 1_4:-44553129 | Msa0164770:CDS |
GGATGAAGACCTCAACGATG+GGG | 0.701949 | 1_4:-44543349 | Msa0164770:CDS |
CCAGTCATACCCATTAACAG+TGG | 0.707802 | 1_4:+44550117 | None:intergenic |
GACCACGCATGCCTTACAGG+AGG | 0.710844 | 1_4:+44552864 | None:intergenic |
TAATCCTACCTGGTCCAACG+TGG | 0.714138 | 1_4:+44551739 | None:intergenic |
AAGTCTGAAAACGAGCATGG+AGG | 0.737070 | 1_4:-44543032 | Msa0164770:CDS |
AATGTCTGCTAAGAGCACGG+AGG | 0.777641 | 1_4:-44549858 | Msa0164770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATATGTATTCTATTAAT+AGG | - | chr1_4:44545086-44545105 | Msa0164770:intron | 10.0% |
!! | TTATATGTATTCTATTAATA+GGG | - | chr1_4:44545087-44545106 | Msa0164770:intron | 10.0% |
!! | TAAAAAAATGTAATGATATA+TGG | + | chr1_4:44546659-44546678 | None:intergenic | 10.0% |
!!! | ATATATCATTACATTTTTTT+AGG | - | chr1_4:44546658-44546677 | Msa0164770:CDS | 10.0% |
!!! | TATATCATTACATTTTTTTA+GGG | - | chr1_4:44546659-44546678 | Msa0164770:CDS | 10.0% |
!! | ATATATATGTTATTCATTAA+AGG | - | chr1_4:44547077-44547096 | Msa0164770:intron | 10.0% |
!! | AAATCTGATTTATAATAATA+AGG | - | chr1_4:44548784-44548803 | Msa0164770:intron | 10.0% |
!! | AATCTGATTTATAATAATAA+GGG | - | chr1_4:44548785-44548804 | Msa0164770:intron | 10.0% |
!!! | TATTTTATATTTACGAAATA+AGG | + | chr1_4:44549891-44549910 | None:intergenic | 10.0% |
!! | CAAAAAATAAATAAAAACAA+AGG | + | chr1_4:44552485-44552504 | None:intergenic | 10.0% |
!! | AAGAAAAAAAAAAAAAAAAC+AGG | + | chr1_4:44554040-44554059 | None:intergenic | 10.0% |
!! | AAATCAGTTATTATAAGAAA+TGG | + | chr1_4:44542617-44542636 | None:intergenic | 15.0% |
!!! | TTTTACAAACAAAAAAATGA+GGG | + | chr1_4:44543665-44543684 | None:intergenic | 15.0% |
!!! | TTTTTACAAACAAAAAAATG+AGG | + | chr1_4:44543666-44543685 | None:intergenic | 15.0% |
!!! | AACACATTTTTTTTTTTTGT+AGG | + | chr1_4:44544069-44544088 | None:intergenic | 15.0% |
!! | TTCTCATTTAAATCATAATA+TGG | - | chr1_4:44545563-44545582 | Msa0164770:intron | 15.0% |
!! | AATTAATTCCATAATTCATT+TGG | + | chr1_4:44546982-44547001 | None:intergenic | 15.0% |
!! | AATTATGGAATTAATTTCTT+TGG | - | chr1_4:44546986-44547005 | Msa0164770:intron | 15.0% |
!! | TATATTCAGATCTTAATTAT+CGG | + | chr1_4:44547349-44547368 | None:intergenic | 15.0% |
!! | ATGAACAAAAAAAATAACTA+GGG | + | chr1_4:44547966-44547985 | None:intergenic | 15.0% |
!! | TATGAACAAAAAAAATAACT+AGG | + | chr1_4:44547967-44547986 | None:intergenic | 15.0% |
!!! | TCTTTAATTGAATATTGATT+TGG | - | chr1_4:44548679-44548698 | Msa0164770:CDS | 15.0% |
!!! | CTTTAATTGAATATTGATTT+GGG | - | chr1_4:44548680-44548699 | Msa0164770:CDS | 15.0% |
!!! | TTTAATTGAATATTGATTTG+GGG | - | chr1_4:44548681-44548700 | Msa0164770:CDS | 15.0% |
!!! | GTTTTTTTAATGAGATTATT+AGG | - | chr1_4:44548724-44548743 | Msa0164770:intron | 15.0% |
!! | AGATGAAATAAATAAACAAA+AGG | - | chr1_4:44549302-44549321 | Msa0164770:intron | 15.0% |
!!! | AGTTTTTTCTTTTCTTTTTT+TGG | - | chr1_4:44550560-44550579 | Msa0164770:intron | 15.0% |
!!! | ATATTTTGAAAGATAAAATG+AGG | + | chr1_4:44551660-44551679 | None:intergenic | 15.0% |
!!! | AGATGAAATTCTATTTTAAA+TGG | + | chr1_4:44552096-44552115 | None:intergenic | 15.0% |
!! | TTTGTGTTATAAAATTTGAT+TGG | - | chr1_4:44552187-44552206 | Msa0164770:intron | 15.0% |
!!! | TTGAAATTTGTTTATTACAT+TGG | - | chr1_4:44552785-44552804 | Msa0164770:intron | 15.0% |
!! | AATAAATACTTCAACTTTAT+GGG | + | chr1_4:44552909-44552928 | None:intergenic | 15.0% |
!! | AATATTGTCTCTATTTATAA+AGG | - | chr1_4:44553036-44553055 | Msa0164770:intron | 15.0% |
!! | ATAAAAAATAAAGCAAATGA+TGG | + | chr1_4:44553430-44553449 | None:intergenic | 15.0% |
!!! | TTTTTGTTAATTTTAAGTAC+AGG | - | chr1_4:44553961-44553980 | Msa0164770:CDS | 15.0% |
!! | ATTAACAATCTGCATAAATT+CGG | + | chr1_4:44543019-44543038 | None:intergenic | 20.0% |
!! | AAATAGTTAAAGGTTTAACA+AGG | + | chr1_4:44543967-44543986 | None:intergenic | 20.0% |
!! | CTATATAAATATAAATGAGG+AGG | + | chr1_4:44544473-44544492 | None:intergenic | 20.0% |
!! | GTGCTATATAAATATAAATG+AGG | + | chr1_4:44544476-44544495 | None:intergenic | 20.0% |
!! | TATTTATATAGCACACAATT+AGG | - | chr1_4:44544482-44544501 | Msa0164770:intron | 20.0% |
!! | ATTTAGTTGCAAAAGATTTA+CGG | - | chr1_4:44545465-44545484 | Msa0164770:CDS | 20.0% |
!! | ATTCGGTAATCAAATATAAA+TGG | + | chr1_4:44545537-44545556 | None:intergenic | 20.0% |
!! | ATTTATATTTGATTACCGAA+TGG | - | chr1_4:44545536-44545555 | Msa0164770:intron | 20.0% |
!! | CAATATTTCGATTAATTAGA+AGG | + | chr1_4:44545619-44545638 | None:intergenic | 20.0% |
!! | TGTATTCTTTATAACTTTGA+GGG | + | chr1_4:44545832-44545851 | None:intergenic | 20.0% |
!! | TTGTATTCTTTATAACTTTG+AGG | + | chr1_4:44545833-44545852 | None:intergenic | 20.0% |
!! | TGTAAAATCACATTAATTGA+AGG | - | chr1_4:44545912-44545931 | Msa0164770:intron | 20.0% |
!! | GTAAAATCACATTAATTGAA+GGG | - | chr1_4:44545913-44545932 | Msa0164770:intron | 20.0% |
!! | GCAAAAAACATAAAAATTGA+TGG | + | chr1_4:44546000-44546019 | None:intergenic | 20.0% |
!! | AGTAATCATAAATGTAATTC+TGG | - | chr1_4:44546437-44546456 | Msa0164770:intron | 20.0% |
!! | AGTATATACTGAAAGAAATT+AGG | + | chr1_4:44546476-44546495 | None:intergenic | 20.0% |
!! | AATACATTCCAAATGAATTA+TGG | - | chr1_4:44546971-44546990 | Msa0164770:intron | 20.0% |
!!! | TTTTATTTGTTGTTCATTAG+AGG | - | chr1_4:44547198-44547217 | Msa0164770:intron | 20.0% |
!! | TATACAAAGATGGAATATAT+AGG | - | chr1_4:44547222-44547241 | Msa0164770:intron | 20.0% |
!! | GTTGAAAATTGTTACAAAAT+GGG | + | chr1_4:44547397-44547416 | None:intergenic | 20.0% |
!! | TGTTGAAAATTGTTACAAAA+TGG | + | chr1_4:44547398-44547417 | None:intergenic | 20.0% |
!! | TGAACAAAAAAAATAACTAG+GGG | + | chr1_4:44547965-44547984 | None:intergenic | 20.0% |
!! | GTTCATATGTTTAAATTTAC+AGG | - | chr1_4:44547980-44547999 | Msa0164770:intron | 20.0% |
!! | AATTAGAATATTTGTATGAC+AGG | - | chr1_4:44548008-44548027 | Msa0164770:intron | 20.0% |
!! | CTGAAATAAAAGAAAAAAGA+TGG | + | chr1_4:44548530-44548549 | None:intergenic | 20.0% |
!!! | TTTTTTCTTTTATTTCAGCT+TGG | - | chr1_4:44548532-44548551 | Msa0164770:intron | 20.0% |
!!! | TTTAAATTGCTCAATTTTAG+AGG | - | chr1_4:44548814-44548833 | Msa0164770:CDS | 20.0% |
!!! | TTAAATTGCTCAATTTTAGA+GGG | - | chr1_4:44548815-44548834 | Msa0164770:CDS | 20.0% |
!! | TAAATAAACAAAAGGTTAAG+AGG | - | chr1_4:44549310-44549329 | Msa0164770:intron | 20.0% |
!! | ATATAAAATATGCTTCAACT+TGG | - | chr1_4:44549901-44549920 | Msa0164770:CDS | 20.0% |
!!! | TTTTGAAATAATGTTGTGTA+AGG | - | chr1_4:44550271-44550290 | Msa0164770:intron | 20.0% |
!!! | TTTGAAATAATGTTGTGTAA+GGG | - | chr1_4:44550272-44550291 | Msa0164770:intron | 20.0% |
!! | AGTATATAGCATCATAAAAA+TGG | + | chr1_4:44550944-44550963 | None:intergenic | 20.0% |
!! | AAAAAAACATACATAATCAC+TGG | + | chr1_4:44551180-44551199 | None:intergenic | 20.0% |
!! | TCAATTTCATCATTATTCAA+GGG | + | chr1_4:44551299-44551318 | None:intergenic | 20.0% |
!! | TTCAATTTCATCATTATTCA+AGG | + | chr1_4:44551300-44551319 | None:intergenic | 20.0% |
!! | TTCAAAATATAAGAAGTTAG+AGG | - | chr1_4:44551670-44551689 | Msa0164770:intron | 20.0% |
!!! | TAAAAAGCACTATGAATAAA+AGG | + | chr1_4:44551771-44551790 | None:intergenic | 20.0% |
!! | AAACAAATTTCAAAAGAATG+AGG | + | chr1_4:44552778-44552797 | None:intergenic | 20.0% |
!! | GAATAAATACTTCAACTTTA+TGG | + | chr1_4:44552910-44552929 | None:intergenic | 20.0% |
!! | AAATTCTACAAATATCTACA+TGG | - | chr1_4:44553067-44553086 | Msa0164770:intron | 20.0% |
!! | TGAAAGATGTAAGTTAATAA+TGG | - | chr1_4:44553128-44553147 | Msa0164770:CDS | 20.0% |
!!! | TTTCCTTTTTACTTGATTTA+TGG | + | chr1_4:44553762-44553781 | None:intergenic | 20.0% |
!! | ATAAATCAAGTAAAAAGGAA+AGG | - | chr1_4:44553761-44553780 | Msa0164770:intron | 20.0% |
!!! | TTTTTTTTCCTCTGTTTTTA+AGG | - | chr1_4:44554009-44554028 | Msa0164770:CDS | 20.0% |
! | ACTTTCGATTCTAACTTATA+CGG | - | chr1_4:44542645-44542664 | Msa0164770:three_prime_UTR | 25.0% |
! | ATAAGCACTTTAATGGTATA+AGG | + | chr1_4:44542845-44542864 | None:intergenic | 25.0% |
! | TACAGAAATAAGCACTTTAA+TGG | + | chr1_4:44542852-44542871 | None:intergenic | 25.0% |
!!! | AGGTTTGTTGATATAATTGA+TGG | - | chr1_4:44543120-44543139 | Msa0164770:CDS | 25.0% |
!! | TTGTTGATATAATTGATGGT+TGG | - | chr1_4:44543124-44543143 | Msa0164770:CDS | 25.0% |
! | AAACTTAAACAGACAAATCA+TGG | + | chr1_4:44543175-44543194 | None:intergenic | 25.0% |
! | CATAAACAATGAAAATGCAT+CGG | + | chr1_4:44543304-44543323 | None:intergenic | 25.0% |
!! | GCATTTTCATTGTTTATGAT+AGG | - | chr1_4:44543306-44543325 | Msa0164770:intron | 25.0% |
!! | TTTTCATTGTTTATGATAGG+CGG | - | chr1_4:44543309-44543328 | Msa0164770:intron | 25.0% |
! | ACCAATTAATTTATGTTGCA+GGG | + | chr1_4:44543462-44543481 | None:intergenic | 25.0% |
! | AACCAATTAATTTATGTTGC+AGG | + | chr1_4:44543463-44543482 | None:intergenic | 25.0% |
!! | CATTAAAAGCACAACAAATA+AGG | + | chr1_4:44544197-44544216 | None:intergenic | 25.0% |
! | CTTTACAATTATAACCTTTG+CGG | + | chr1_4:44544377-44544396 | None:intergenic | 25.0% |
!!! | ATACTAGTTTGTTTGAGTTA+TGG | - | chr1_4:44544839-44544858 | Msa0164770:CDS | 25.0% |
! | AAACTTAAAGAGGAACTAAA+TGG | - | chr1_4:44544932-44544951 | Msa0164770:intron | 25.0% |
! | ATATTAATGTCTGAAAAGCA+CGG | + | chr1_4:44545249-44545268 | None:intergenic | 25.0% |
!! | AGATAATTTTCAAATGAGGT+TGG | + | chr1_4:44545304-44545323 | None:intergenic | 25.0% |
! | AACCTCATTTGAAAATTATC+TGG | - | chr1_4:44545303-44545322 | Msa0164770:intron | 25.0% |
! | ATTTGAAAATTATCTGGTGT+AGG | - | chr1_4:44545309-44545328 | Msa0164770:intron | 25.0% |
! | TTTGCATATAAACTCAAACA+AGG | + | chr1_4:44545381-44545400 | None:intergenic | 25.0% |
!! | TTGTTTGAGTTTATATGCAA+AGG | - | chr1_4:44545380-44545399 | Msa0164770:intron | 25.0% |
!! | TGTTTGAGTTTATATGCAAA+GGG | - | chr1_4:44545381-44545400 | Msa0164770:intron | 25.0% |
! | TTAAATGAGAATGAACCATT+CGG | + | chr1_4:44545554-44545573 | None:intergenic | 25.0% |
! | GTATGAAAATTAATTGACTG+AGG | + | chr1_4:44545668-44545687 | None:intergenic | 25.0% |
! | TGCTTATATATAAGACTGAA+GGG | + | chr1_4:44545755-44545774 | None:intergenic | 25.0% |
! | TTGCTTATATATAAGACTGA+AGG | + | chr1_4:44545756-44545775 | None:intergenic | 25.0% |
!! | GATCACCTAATTTTCTTAAA+GGG | + | chr1_4:44545799-44545818 | None:intergenic | 25.0% |
!! | AGATCACCTAATTTTCTTAA+AGG | + | chr1_4:44545800-44545819 | None:intergenic | 25.0% |
! | GAATGATCATCAAAGTAAAA+AGG | + | chr1_4:44546047-44546066 | None:intergenic | 25.0% |
!!! | TGAGTGAGATTGTTTTATTT+TGG | - | chr1_4:44546085-44546104 | Msa0164770:intron | 25.0% |
!!! | GAGTGAGATTGTTTTATTTT+GGG | - | chr1_4:44546086-44546105 | Msa0164770:intron | 25.0% |
! | TTCAACTTCTTAAACACAAA+CGG | + | chr1_4:44546192-44546211 | None:intergenic | 25.0% |
! | TTTGTGTTTAAGAAGTTGAA+TGG | - | chr1_4:44546192-44546211 | Msa0164770:intron | 25.0% |
!! | ATTCATTCATGAAGAAGTAT+TGG | + | chr1_4:44546364-44546383 | None:intergenic | 25.0% |
!! | GCACTCTATTTATTTAAAGT+GGG | + | chr1_4:44546927-44546946 | None:intergenic | 25.0% |
! | TGCACTCTATTTATTTAAAG+TGG | + | chr1_4:44546928-44546947 | None:intergenic | 25.0% |
! | CAATTACTACAGTCATATAA+TGG | + | chr1_4:44547023-44547042 | None:intergenic | 25.0% |
!!! | ACTGTAGTAATTGTTTTAGA+AGG | - | chr1_4:44547030-44547049 | Msa0164770:intron | 25.0% |
! | GAGTTACTACAATCATATAA+TGG | + | chr1_4:44547142-44547161 | None:intergenic | 25.0% |
!! | TTTGTAACAATTTTCAACAG+CGG | - | chr1_4:44547399-44547418 | Msa0164770:intron | 25.0% |
!!! | GCTAACTATTTTAAACTTTC+AGG | - | chr1_4:44547437-44547456 | Msa0164770:intron | 25.0% |
! | AAAATAATTCACTATCCTTG+TGG | + | chr1_4:44547731-44547750 | None:intergenic | 25.0% |
! | AACTATTTGTATTCTTACAG+CGG | - | chr1_4:44547828-44547847 | Msa0164770:intron | 25.0% |
! | AACAAAAAAAATAACTAGGG+GGG | + | chr1_4:44547963-44547982 | None:intergenic | 25.0% |
! | GAACAAAAAAAATAACTAGG+GGG | + | chr1_4:44547964-44547983 | None:intergenic | 25.0% |
!! | GTTACAACTTTGAAAGAATT+GGG | + | chr1_4:44548493-44548512 | None:intergenic | 25.0% |
!! | TGTTACAACTTTGAAAGAAT+TGG | + | chr1_4:44548494-44548513 | None:intergenic | 25.0% |
! | GATTATTAGGTCAAATGAAA+TGG | - | chr1_4:44548737-44548756 | Msa0164770:intron | 25.0% |
! | ATTAGCCATTTATGAAGTTA+CGG | - | chr1_4:44548847-44548866 | Msa0164770:CDS | 25.0% |
!! | GATCAAATTGTCAACAATTT+TGG | + | chr1_4:44548906-44548925 | None:intergenic | 25.0% |
! | GGATAAAAAAAATGTTCAGA+TGG | - | chr1_4:44548981-44549000 | Msa0164770:intron | 25.0% |
! | TTGGTATTTCTTGTAGTTAA+TGG | + | chr1_4:44549161-44549180 | None:intergenic | 25.0% |
! | TTAACTACAAGAAATACCAA+CGG | - | chr1_4:44549161-44549180 | Msa0164770:intron | 25.0% |
! | AGACTATGGTAAAATGAAAT+GGG | + | chr1_4:44549198-44549217 | None:intergenic | 25.0% |
! | AAGACTATGGTAAAATGAAA+TGG | + | chr1_4:44549199-44549218 | None:intergenic | 25.0% |
! | TGTAAGTACATATAAGACTA+TGG | + | chr1_4:44549212-44549231 | None:intergenic | 25.0% |
! | TAGAAGTAAAATAGAGTGTA+TGG | - | chr1_4:44549373-44549392 | Msa0164770:intron | 25.0% |
! | ATATCAAGTGTACAAAATCT+CGG | - | chr1_4:44549403-44549422 | Msa0164770:intron | 25.0% |
! | CAAGCTTAAGATAAAATTTC+AGG | - | chr1_4:44549549-44549568 | Msa0164770:intron | 25.0% |
! | TACTTTCTTGAACTTGAAAA+TGG | + | chr1_4:44549697-44549716 | None:intergenic | 25.0% |
!!! | AGGATTAGTATCTACATTTT+TGG | - | chr1_4:44549751-44549770 | Msa0164770:intron | 25.0% |
!! | CAAGCTAAACCATATTATTT+TGG | + | chr1_4:44549842-44549861 | None:intergenic | 25.0% |
! | AGCAAGTTATGTATATCATA+TGG | - | chr1_4:44550176-44550195 | Msa0164770:CDS | 25.0% |
! | GCAAGTTATGTATATCATAT+GGG | - | chr1_4:44550177-44550196 | Msa0164770:CDS | 25.0% |
! | TGTTTATAGTTGTAGACAAA+TGG | - | chr1_4:44550319-44550338 | Msa0164770:intron | 25.0% |
! | GTTTATAGTTGTAGACAAAT+GGG | - | chr1_4:44550320-44550339 | Msa0164770:intron | 25.0% |
!!! | ACAAATGGGAGAATTTTTTT+AGG | - | chr1_4:44550334-44550353 | Msa0164770:intron | 25.0% |
!! | GAAAATTTGTTCCATTTAAG+GGG | + | chr1_4:44550373-44550392 | None:intergenic | 25.0% |
!! | GGAAAATTTGTTCCATTTAA+GGG | + | chr1_4:44550374-44550393 | None:intergenic | 25.0% |
!! | AGGAAAATTTGTTCCATTTA+AGG | + | chr1_4:44550375-44550394 | None:intergenic | 25.0% |
!! | TAAATGGAACAAATTTTCCT+TGG | - | chr1_4:44550375-44550394 | Msa0164770:intron | 25.0% |
! | AGAGAAGATTACAAATAGTA+AGG | - | chr1_4:44550635-44550654 | Msa0164770:intron | 25.0% |
! | ATGCTATATACTATGAATTC+AGG | - | chr1_4:44550952-44550971 | Msa0164770:intron | 25.0% |
!!! | GTTTGCTATTTGTAGATTTT+AGG | - | chr1_4:44551440-44551459 | Msa0164770:intron | 25.0% |
!! | GTATGTTCTATTTTCCTTTT+AGG | + | chr1_4:44551730-44551749 | None:intergenic | 25.0% |
!! | AGACCCAAAAATCAATTTTA+CGG | - | chr1_4:44551815-44551834 | Msa0164770:CDS | 25.0% |
! | TCATCATCAAGTAAAAAGAA+TGG | + | chr1_4:44551982-44552001 | None:intergenic | 25.0% |
!! | TTACAAGACCAAAAAAGTAT+CGG | + | chr1_4:44552010-44552029 | None:intergenic | 25.0% |
! | TTTGATTGGATAAACTGAAA+TGG | - | chr1_4:44552201-44552220 | Msa0164770:intron | 25.0% |
!! | TTCATCTCATTTTCTGATTT+TGG | + | chr1_4:44552302-44552321 | None:intergenic | 25.0% |
!!! | TTTTTTAGGCCATTTAACTT+AGG | + | chr1_4:44552331-44552350 | None:intergenic | 25.0% |
! | AAGTTAAATGGCCTAAAAAA+TGG | - | chr1_4:44552331-44552350 | Msa0164770:intron | 25.0% |
! | TAATAATTGCATCGAAGTTT+AGG | - | chr1_4:44552424-44552443 | Msa0164770:intron | 25.0% |
! | TCATTGCTTGATATTATAAG+AGG | - | chr1_4:44552861-44552880 | Msa0164770:CDS | 25.0% |
! | AACTTTATGGGAAAAAAAGA+TGG | + | chr1_4:44552897-44552916 | None:intergenic | 25.0% |
!! | TAAATTCCATCTTTTTGACA+AGG | + | chr1_4:44552957-44552976 | None:intergenic | 25.0% |
! | TTATTTCCAAGATAGTTCTT+AGG | - | chr1_4:44554105-44554124 | Msa0164770:intron | 25.0% |
! | CTTAGGAAACAAATTTGATT+TGG | - | chr1_4:44554122-44554141 | Msa0164770:intron | 25.0% |
ATCAGAACTCTCATTGAAAA+TGG | - | chr1_4:44542717-44542736 | Msa0164770:three_prime_UTR | 30.0% | |
TATAAAACGATACCTGATCA+CGG | + | chr1_4:44542791-44542810 | None:intergenic | 30.0% | |
TAAGCACTTGTACAATTGTT+CGG | + | chr1_4:44542941-44542960 | None:intergenic | 30.0% | |
CAATTTAAGTCAATTCAAGC+AGG | - | chr1_4:44542977-44542996 | Msa0164770:CDS | 30.0% | |
TCTTCATTATATGCTTAGCA+AGG | - | chr1_4:44543038-44543057 | Msa0164770:CDS | 30.0% | |
TTGTAACACCATAAAACAGT+TGG | + | chr1_4:44543081-44543100 | None:intergenic | 30.0% | |
!!! | AACTGTTTTATGGTGTTACA+AGG | - | chr1_4:44543080-44543099 | Msa0164770:CDS | 30.0% |
! | AATTGATGGTTGGAATGAAT+CGG | - | chr1_4:44543134-44543153 | Msa0164770:CDS | 30.0% |
TTTCATTGTTTATGATAGGC+GGG | - | chr1_4:44543310-44543329 | Msa0164770:intron | 30.0% | |
ACCCTGCAACATAAATTAAT+TGG | - | chr1_4:44543458-44543477 | Msa0164770:intron | 30.0% | |
AATCCTACAAGGAAAAACAA+AGG | + | chr1_4:44543489-44543508 | None:intergenic | 30.0% | |
! | TTTTTCCTTGTAGGATTTTG+AGG | - | chr1_4:44543492-44543511 | Msa0164770:intron | 30.0% |
ATAGTTCTTGCTAGTAGATT+AGG | + | chr1_4:44543526-44543545 | None:intergenic | 30.0% | |
TACCAATTTCATCTCACATA+AGG | - | chr1_4:44543910-44543929 | Msa0164770:intron | 30.0% | |
AGGAAGGAAGAAATAGTTAA+AGG | + | chr1_4:44543977-44543996 | None:intergenic | 30.0% | |
!!! | ATTTTCCCTGGTTTTACTTA+TGG | - | chr1_4:44544096-44544115 | Msa0164770:intron | 30.0% |
GCTATTAATCTGATTGTGTT+TGG | - | chr1_4:44544240-44544259 | Msa0164770:intron | 30.0% | |
AAGTAGAAAGAGGAAATAGA+GGG | - | chr1_4:44544411-44544430 | Msa0164770:intron | 30.0% | |
CAATGTTCAATTTATGTTGC+CGG | - | chr1_4:44544562-44544581 | Msa0164770:intron | 30.0% | |
CTATCCTATCTCAATCATAT+CGG | - | chr1_4:44544744-44544763 | Msa0164770:intron | 30.0% | |
AAACAAACTAGTATTCTGCT+TGG | + | chr1_4:44544833-44544852 | None:intergenic | 30.0% | |
TAAAGGTAAATAATCCTACC+TGG | + | chr1_4:44545003-44545022 | None:intergenic | 30.0% | |
! | AACTTTCCTTGATGCAATTT+TGG | - | chr1_4:44545122-44545141 | Msa0164770:intron | 30.0% |
! | TATTAATGTCTGAAAAGCAC+GGG | + | chr1_4:44545248-44545267 | None:intergenic | 30.0% |
GACATTAATATCTTCATGCA+TGG | - | chr1_4:44545258-44545277 | Msa0164770:CDS | 30.0% | |
AATGAGGTTGGAAATAAAGT+AGG | + | chr1_4:44545292-44545311 | None:intergenic | 30.0% | |
! | CACCAGATAATTTTCAAATG+AGG | + | chr1_4:44545308-44545327 | None:intergenic | 30.0% |
! | AACAAGGTTTTCAAATTCTC+CGG | + | chr1_4:44545365-44545384 | None:intergenic | 30.0% |
GTTTGATGTACTTGAATACA+AGG | - | chr1_4:44545403-44545422 | Msa0164770:intron | 30.0% | |
ATGGAATGTAACTATGGTAA+TGG | - | chr1_4:44545488-44545507 | Msa0164770:intron | 30.0% | |
!! | TGAGCTTGCTATATATTTAG+TGG | + | chr1_4:44545645-44545664 | None:intergenic | 30.0% |
! | TCACACCCTTTAAGAAAATT+AGG | - | chr1_4:44545791-44545810 | Msa0164770:intron | 30.0% |
AATTTCTAAATTACCCCTCA+TGG | - | chr1_4:44545857-44545876 | Msa0164770:intron | 30.0% | |
ATTTCTAAATTACCCCTCAT+GGG | - | chr1_4:44545858-44545877 | Msa0164770:intron | 30.0% | |
! | TTTTTGCTTATATTCGAGAC+CGG | - | chr1_4:44546013-44546032 | Msa0164770:intron | 30.0% |
!! | AGATTTTGATGTGAAAAGTG+TGG | - | chr1_4:44546261-44546280 | Msa0164770:intron | 30.0% |
!! | GATTTTGATGTGAAAAGTGT+GGG | - | chr1_4:44546262-44546281 | Msa0164770:intron | 30.0% |
TTAAGAAACTTACTGCTGTA+AGG | - | chr1_4:44546409-44546428 | Msa0164770:intron | 30.0% | |
AGAAATTAGGATGAAAAGCA+AGG | + | chr1_4:44546463-44546482 | None:intergenic | 30.0% | |
CATTAAACTTGACTCTAGAT+GGG | + | chr1_4:44546707-44546726 | None:intergenic | 30.0% | |
ACATTAAACTTGACTCTAGA+TGG | + | chr1_4:44546708-44546727 | None:intergenic | 30.0% | |
GATTGTAGTAACTCTTTAGA+AGG | - | chr1_4:44547148-44547167 | Msa0164770:intron | 30.0% | |
CATTAGAGGTTATACAAAGA+TGG | - | chr1_4:44547212-44547231 | Msa0164770:intron | 30.0% | |
GGTATAACCTGCTAATATTA+GGG | + | chr1_4:44547571-44547590 | None:intergenic | 30.0% | |
TGGTATAACCTGCTAATATT+AGG | + | chr1_4:44547572-44547591 | None:intergenic | 30.0% | |
! | AAGAAGTATGAAATGAGCTT+TGG | + | chr1_4:44547592-44547611 | None:intergenic | 30.0% |
AAGCTCATTTCATACTTCTT+TGG | - | chr1_4:44547592-44547611 | Msa0164770:intron | 30.0% | |
!!! | CATATTTTGATCCCCATTTA+CGG | - | chr1_4:44547625-44547644 | Msa0164770:intron | 30.0% |
GTGATCTATACTATGTCAAT+CGG | - | chr1_4:44547688-44547707 | Msa0164770:intron | 30.0% | |
TGATCTATACTATGTCAATC+GGG | - | chr1_4:44547689-44547708 | Msa0164770:intron | 30.0% | |
!!! | GGATAGTGAATTATTTTTGC+AGG | - | chr1_4:44547734-44547753 | Msa0164770:intron | 30.0% |
AATGTCAAAATATGCAAACC+TGG | + | chr1_4:44548082-44548101 | None:intergenic | 30.0% | |
TTACGCATAAATAATCCTCA+TGG | - | chr1_4:44548100-44548119 | Msa0164770:intron | 30.0% | |
CTTAAACTAAACAAACCCTT+GGG | + | chr1_4:44548157-44548176 | None:intergenic | 30.0% | |
TCTTAAACTAAACAAACCCT+TGG | + | chr1_4:44548158-44548177 | None:intergenic | 30.0% | |
AAGCATGATAAACAGAAAGA+CGG | + | chr1_4:44548214-44548233 | None:intergenic | 30.0% | |
ATGTAGGAAGTTACAACAAA+AGG | + | chr1_4:44548239-44548258 | None:intergenic | 30.0% | |
GAATAGAAGTTATGGAATGT+AGG | + | chr1_4:44548255-44548274 | None:intergenic | 30.0% | |
ATTCCATAACTTCTATTCAC+AGG | - | chr1_4:44548257-44548276 | Msa0164770:intron | 30.0% | |
AAACCTGTGAATAGAAGTTA+TGG | + | chr1_4:44548263-44548282 | None:intergenic | 30.0% | |
GAAAAAAGATGGAAGATAAG+AGG | + | chr1_4:44548519-44548538 | None:intergenic | 30.0% | |
!! | CTTTTATTTCAGCTTGGATA+TGG | - | chr1_4:44548538-44548557 | Msa0164770:intron | 30.0% |
TACTTAGCAATGTTCACTTT+AGG | - | chr1_4:44548611-44548630 | Msa0164770:intron | 30.0% | |
TTAGCCATTTATGAAGTTAC+GGG | - | chr1_4:44548848-44548867 | Msa0164770:CDS | 30.0% | |
ATTTCCCGTAACTTCATAAA+TGG | + | chr1_4:44548855-44548874 | None:intergenic | 30.0% | |
AATTTGATCTAATGTCTGAG+AGG | - | chr1_4:44548917-44548936 | Msa0164770:intron | 30.0% | |
TATCCCTTTGATATTGCTTT+GGG | + | chr1_4:44548966-44548985 | None:intergenic | 30.0% | |
TTATCCCTTTGATATTGCTT+TGG | + | chr1_4:44548967-44548986 | None:intergenic | 30.0% | |
!! | TCAGATGGTTTTCATTGATT+TGG | - | chr1_4:44548996-44549015 | Msa0164770:CDS | 30.0% |
!!! | CAGATGGTTTTCATTGATTT+GGG | - | chr1_4:44548997-44549016 | Msa0164770:CDS | 30.0% |
ATTTGGGAAAACATTTGACA+AGG | - | chr1_4:44549013-44549032 | Msa0164770:CDS | 30.0% | |
TGACTATATTCAAGCTATGA+AGG | - | chr1_4:44549084-44549103 | Msa0164770:intron | 30.0% | |
CAAATGATATAGTTCCATGT+GGG | - | chr1_4:44549272-44549291 | Msa0164770:CDS | 30.0% | |
TATCAAGTGTACAAAATCTC+GGG | - | chr1_4:44549404-44549423 | Msa0164770:intron | 30.0% | |
TACAAAATGACAGAAACAGA+GGG | - | chr1_4:44549434-44549453 | Msa0164770:intron | 30.0% | |
AAGACTTGAAATGTTGTATG+AGG | - | chr1_4:44549582-44549601 | Msa0164770:intron | 30.0% | |
!!! | GTATCTACATTTTTGGAGTA+TGG | - | chr1_4:44549758-44549777 | Msa0164770:intron | 30.0% |
!! | ATGGTGCTACCAAAATAATA+TGG | - | chr1_4:44549830-44549849 | Msa0164770:intron | 30.0% |
CTTTCTTGATTCAAGGAAAA+AGG | - | chr1_4:44550499-44550518 | Msa0164770:intron | 30.0% | |
GAAGATTACAAATAGTAAGG+AGG | - | chr1_4:44550638-44550657 | Msa0164770:intron | 30.0% | |
ATTATTCCCTCTGCAAATTA+AGG | - | chr1_4:44550832-44550851 | Msa0164770:intron | 30.0% | |
TTATTCCCTCTGCAAATTAA+GGG | - | chr1_4:44550833-44550852 | Msa0164770:intron | 30.0% | |
! | TAAAAATGGAAAGCATGTGT+TGG | + | chr1_4:44550930-44550949 | None:intergenic | 30.0% |
! | AAATTTGCTCCTTTCTACAT+TGG | - | chr1_4:44551121-44551140 | Msa0164770:intron | 30.0% |
AATAAAGCTTAACTGGAATC+TGG | + | chr1_4:44551147-44551166 | None:intergenic | 30.0% | |
AGGCAAAAATAAAGCTTAAC+TGG | + | chr1_4:44551154-44551173 | None:intergenic | 30.0% | |
! | ACATACATAATCACTGGTTA+AGG | + | chr1_4:44551174-44551193 | None:intergenic | 30.0% |
! | GTTGATGAAACAAATCAGTT+CGG | - | chr1_4:44551320-44551339 | Msa0164770:intron | 30.0% |
!!! | ACAAATCAGTTCGGTTTTTT+TGG | - | chr1_4:44551329-44551348 | Msa0164770:CDS | 30.0% |
!!! | TTTTTTTGGTCCATTTTACC+AGG | - | chr1_4:44551343-44551362 | Msa0164770:CDS | 30.0% |
!!! | TTTTTTGGTCCATTTTACCA+GGG | - | chr1_4:44551344-44551363 | Msa0164770:CDS | 30.0% |
ATGGAACATAGAGATCATAA+TGG | + | chr1_4:44551388-44551407 | None:intergenic | 30.0% | |
TATGGAATTCCTTGAGTTAT+AGG | - | chr1_4:44551551-44551570 | Msa0164770:CDS | 30.0% | |
!! | GCTCCGTAAAATTGATTTTT+GGG | + | chr1_4:44551821-44551840 | None:intergenic | 30.0% |
!! | TGCTCCGTAAAATTGATTTT+TGG | + | chr1_4:44551822-44551841 | None:intergenic | 30.0% |
! | ACAACTGCTGACAAATTTTT+GGG | - | chr1_4:44551855-44551874 | Msa0164770:intron | 30.0% |
TCTGGTAATTTCTCAAATGA+TGG | - | chr1_4:44551953-44551972 | Msa0164770:intron | 30.0% | |
TGAACAATCGTGAATTGTTA+GGG | + | chr1_4:44552143-44552162 | None:intergenic | 30.0% | |
CAACTTCAGTTATTTGTACA+CGG | + | chr1_4:44552399-44552418 | None:intergenic | 30.0% | |
! | TTAAAAGCACACCAAATCAA+TGG | + | chr1_4:44552450-44552469 | None:intergenic | 30.0% |
! | ATGTAACTGGAATCTTTTCT+TGG | + | chr1_4:44552550-44552569 | None:intergenic | 30.0% |
CTGCAAGATTAATCAAGTAA+TGG | + | chr1_4:44552745-44552764 | None:intergenic | 30.0% | |
AATGGTTGAACATTGTGTAT+TGG | - | chr1_4:44553146-44553165 | Msa0164770:CDS | 30.0% | |
!! | TTCATTAACTCAACTTGCTA+CGG | + | chr1_4:44553192-44553211 | None:intergenic | 30.0% |
ATTAGATGTGGAAAGAAACA+AGG | + | chr1_4:44553475-44553494 | None:intergenic | 30.0% | |
! | GAGCTTCTAAAAATTAGATG+TGG | + | chr1_4:44553487-44553506 | None:intergenic | 30.0% |
TTGTCAGTATAAAATCGAAC+CGG | - | chr1_4:44553668-44553687 | Msa0164770:CDS | 30.0% | |
!! | CGTTTTCAGACTTTAATTTC+CGG | + | chr1_4:44553690-44553709 | None:intergenic | 30.0% |
GTCATAAGAGTGATAAAAAG+CGG | - | chr1_4:44553719-44553738 | Msa0164770:intron | 30.0% | |
CAGCCATAAATCAAGTAAAA+AGG | - | chr1_4:44553756-44553775 | Msa0164770:intron | 30.0% | |
! | TTTTTCTTTTTCTCTCCCTT+TGG | - | chr1_4:44554052-44554071 | Msa0164770:intron | 30.0% |
TTGTTTCCTAAGAACTATCT+TGG | + | chr1_4:44554114-44554133 | None:intergenic | 30.0% | |
! | GCGATTTATTCAGAGTTTTA+TGG | - | chr1_4:44554144-44554163 | Msa0164770:intron | 30.0% |
TTGAAGTTAGGGTTTATGGA+GGG | + | chr1_4:44542551-44542570 | None:intergenic | 35.0% | |
AAGCTTGAAGTTAGGGTTTA+TGG | + | chr1_4:44542555-44542574 | None:intergenic | 35.0% | |
TTGAAAATGGCGTCAAATCA+AGG | - | chr1_4:44542730-44542749 | Msa0164770:three_prime_UTR | 35.0% | |
CGATCCATGTTTGTCATTAT+CGG | - | chr1_4:44542756-44542775 | Msa0164770:three_prime_UTR | 35.0% | |
ATAAAACGATACCTGATCAC+GGG | + | chr1_4:44542790-44542809 | None:intergenic | 35.0% | |
AAGCACTTGTACAATTGTTC+GGG | + | chr1_4:44542940-44542959 | None:intergenic | 35.0% | |
CATAAATTCGGAACACTCTT+GGG | + | chr1_4:44543007-44543026 | None:intergenic | 35.0% | |
! | AATCAAGGCCAACTGTTTTA+TGG | - | chr1_4:44543070-44543089 | Msa0164770:CDS | 35.0% |
!!! | TCGTCATTTTTTCATCTGCT+TGG | + | chr1_4:44543254-44543273 | None:intergenic | 35.0% |
TTCATTGTTTATGATAGGCG+GGG | - | chr1_4:44543311-44543330 | Msa0164770:intron | 35.0% | |
! | AAGCATTCTGAAAGAGTTCT+TGG | - | chr1_4:44543354-44543373 | Msa0164770:CDS | 35.0% |
AATACATCTCAGAAAGGTCA+GGG | + | chr1_4:44543436-44543455 | None:intergenic | 35.0% | |
AAATACATCTCAGAAAGGTC+AGG | + | chr1_4:44543437-44543456 | None:intergenic | 35.0% | |
!!! | TTGCCTTTGTTTTTCCTTGT+AGG | - | chr1_4:44543483-44543502 | Msa0164770:intron | 35.0% |
GGCTATATAAACAGAAGAGA+GGG | + | chr1_4:44543735-44543754 | None:intergenic | 35.0% | |
!!! | ATAGCCCTCATTTTTTCATG+CGG | - | chr1_4:44543749-44543768 | Msa0164770:intron | 35.0% |
TGAACCGCATGAAAAAATGA+GGG | + | chr1_4:44543756-44543775 | None:intergenic | 35.0% | |
GACCTTATGTGAGATGAAAT+TGG | + | chr1_4:44543915-44543934 | None:intergenic | 35.0% | |
ATATGGGTTTCCAGATACTT+GGG | - | chr1_4:44544026-44544045 | Msa0164770:intron | 35.0% | |
!! | GTGTTTTTGTACATTTTCCC+TGG | - | chr1_4:44544084-44544103 | Msa0164770:intron | 35.0% |
ATCAGCCATAAGTAAAACCA+GGG | + | chr1_4:44544104-44544123 | None:intergenic | 35.0% | |
!! | AATCTGATTGTGTTTGGTGT+TGG | - | chr1_4:44544246-44544265 | Msa0164770:intron | 35.0% |
!! | ATTGTGTTTGGTGTTGGATT+GGG | - | chr1_4:44544252-44544271 | Msa0164770:intron | 35.0% |
! | ATTGTGTTTGATAACCGCAA+AGG | - | chr1_4:44544360-44544379 | Msa0164770:intron | 35.0% |
GAAGTAGAAAGAGGAAATAG+AGG | - | chr1_4:44544410-44544429 | Msa0164770:intron | 35.0% | |
AGTAGAAAGAGGAAATAGAG+GGG | - | chr1_4:44544412-44544431 | Msa0164770:intron | 35.0% | |
! | TTGTCCTAAAAAGCACATCT+AGG | - | chr1_4:44544510-44544529 | Msa0164770:intron | 35.0% |
TTTGCCGATATGATTGAGAT+AGG | + | chr1_4:44544751-44544770 | None:intergenic | 35.0% | |
ATGTACTAAATTGATGCTGC+AGG | - | chr1_4:44544871-44544890 | Msa0164770:CDS | 35.0% | |
ACCACACAGAAAAACCAATT+TGG | + | chr1_4:44545052-44545071 | None:intergenic | 35.0% | |
TCTTGTCCAAAATTGCATCA+AGG | + | chr1_4:44545131-44545150 | None:intergenic | 35.0% | |
AGTTGCAAAAGATTTACGGA+TGG | - | chr1_4:44545469-44545488 | Msa0164770:CDS | 35.0% | |
TTACGGATGGAATGTAACTA+TGG | - | chr1_4:44545482-44545501 | Msa0164770:intron | 35.0% | |
!! | AAGTAAAAAGGTACTCCTTC+CGG | + | chr1_4:44546035-44546054 | None:intergenic | 35.0% |
TGATCATTCAGATACCTAAC+TGG | - | chr1_4:44546058-44546077 | Msa0164770:intron | 35.0% | |
!! | TGGCAAAAGTACCTTTCTAA+AGG | - | chr1_4:44546157-44546176 | Msa0164770:intron | 35.0% |
! | GGACAAAAAGTCCTTTAGAA+AGG | + | chr1_4:44546171-44546190 | None:intergenic | 35.0% |
! | GCTTTCGCAAGTTGAATTAT+TGG | - | chr1_4:44546514-44546533 | Msa0164770:intron | 35.0% |
TAAAGAGCTAACTCTTGATG+TGG | - | chr1_4:44546742-44546761 | Msa0164770:intron | 35.0% | |
TTCCTTCATAACTTTGCATG+GGG | + | chr1_4:44546799-44546818 | None:intergenic | 35.0% | |
GTTCCTTCATAACTTTGCAT+GGG | + | chr1_4:44546800-44546819 | None:intergenic | 35.0% | |
AGTTCCTTCATAACTTTGCA+TGG | + | chr1_4:44546801-44546820 | None:intergenic | 35.0% | |
ATGCAAAGTTATGAAGGAAC+TGG | - | chr1_4:44546800-44546819 | Msa0164770:intron | 35.0% | |
ATGGAATATATAGGCAGAGT+CGG | - | chr1_4:44547231-44547250 | Msa0164770:intron | 35.0% | |
AATAAAGAATCTACCACAGC+TGG | - | chr1_4:44547263-44547282 | Msa0164770:intron | 35.0% | |
ATAAAGAATCTACCACAGCT+GGG | - | chr1_4:44547264-44547283 | Msa0164770:intron | 35.0% | |
TAACCTGCTAATATTAGGGA+TGG | + | chr1_4:44547567-44547586 | None:intergenic | 35.0% | |
CGTAAATGGGGATCAAAATA+TGG | + | chr1_4:44547627-44547646 | None:intergenic | 35.0% | |
AGAACAACACAACCGTAAAT+GGG | + | chr1_4:44547640-44547659 | None:intergenic | 35.0% | |
TAATTCACTATCCTTGTGGT+AGG | + | chr1_4:44547727-44547746 | None:intergenic | 35.0% | |
TCCAAATGATCTGCAATTGA+TGG | - | chr1_4:44547889-44547908 | Msa0164770:intron | 35.0% | |
TACCAAGTAGCACAAATAAG+TGG | + | chr1_4:44547931-44547950 | None:intergenic | 35.0% | |
GAATATTTGTATGACAGGAC+CGG | - | chr1_4:44548013-44548032 | Msa0164770:intron | 35.0% | |
TGGATGACACACAAAATATC+AGG | + | chr1_4:44548062-44548081 | None:intergenic | 35.0% | |
! | TGATATTTTGTGTGTCATCC+AGG | - | chr1_4:44548061-44548080 | Msa0164770:intron | 35.0% |
! | TCTCTTTTGATAGAACCCAA+GGG | - | chr1_4:44548139-44548158 | Msa0164770:intron | 35.0% |
AGCATGATAAACAGAAAGAC+GGG | + | chr1_4:44548213-44548232 | None:intergenic | 35.0% | |
AACTGCTCACAAAATTTCCA+TGG | + | chr1_4:44548363-44548382 | None:intergenic | 35.0% | |
GTGAAGGAAAAACTGTATCT+CGG | + | chr1_4:44548386-44548405 | None:intergenic | 35.0% | |
! | ACAGTTTTTCCTTCACTTTC+AGG | - | chr1_4:44548390-44548409 | Msa0164770:CDS | 35.0% |
ATGAGGGTAACTTCTAGATT+TGG | - | chr1_4:44548450-44548469 | Msa0164770:CDS | 35.0% | |
CAAATGAAATGGCAGATGAA+TGG | - | chr1_4:44548748-44548767 | Msa0164770:intron | 35.0% | |
ACTTCCCAAAGCAATATCAA+AGG | - | chr1_4:44548959-44548978 | Msa0164770:intron | 35.0% | |
CTTCCCAAAGCAATATCAAA+GGG | - | chr1_4:44548960-44548979 | Msa0164770:intron | 35.0% | |
!! | AAGGTGTCGAAAAAGATTTG+TGG | - | chr1_4:44549032-44549051 | Msa0164770:CDS | 35.0% |
GGAAAACCCTATAACAGAAA+CGG | - | chr1_4:44549053-44549072 | Msa0164770:CDS | 35.0% | |
GAAAACCCTATAACAGAAAC+GGG | - | chr1_4:44549054-44549073 | Msa0164770:CDS | 35.0% | |
! | AAAAGCATGCATTTCCATGT+TGG | + | chr1_4:44549250-44549269 | None:intergenic | 35.0% |
GCAAATGATATAGTTCCATG+TGG | - | chr1_4:44549271-44549290 | Msa0164770:CDS | 35.0% | |
AAACAAAAGGTTAAGAGGCT+TGG | - | chr1_4:44549315-44549334 | Msa0164770:intron | 35.0% | |
GTACAAAATGACAGAAACAG+AGG | - | chr1_4:44549433-44549452 | Msa0164770:intron | 35.0% | |
TGTCAACAATTGGATTCATG+TGG | - | chr1_4:44549460-44549479 | Msa0164770:intron | 35.0% | |
GTCAACAATTGGATTCATGT+GGG | - | chr1_4:44549461-44549480 | Msa0164770:intron | 35.0% | |
TCAACAATTGGATTCATGTG+GGG | - | chr1_4:44549462-44549481 | Msa0164770:intron | 35.0% | |
! | CACATAAAACACTTGAGTTG+AGG | + | chr1_4:44549507-44549526 | None:intergenic | 35.0% |
ACTTGAAATGTTGTATGAGG+CGG | - | chr1_4:44549585-44549604 | Msa0164770:intron | 35.0% | |
ACTGTCTGCAGTTATTATGA+AGG | - | chr1_4:44549991-44550010 | Msa0164770:intron | 35.0% | |
TGAGAATGATGTTGACGATA+AGG | - | chr1_4:44550032-44550051 | Msa0164770:intron | 35.0% | |
GCTTCTGTAACTGTAATTTG+TGG | + | chr1_4:44550066-44550085 | None:intergenic | 35.0% | |
! | AATTTTCCTTGGCTTCTCTA+TGG | - | chr1_4:44550386-44550405 | Msa0164770:intron | 35.0% |
!! | TCAGCTAATGGGATTTTTAG+AGG | - | chr1_4:44550412-44550431 | Msa0164770:CDS | 35.0% |
!! | TTTTTAGAGGAGTTCTTTGC+AGG | - | chr1_4:44550425-44550444 | Msa0164770:CDS | 35.0% |
CCTTGAATCAAGAAAGAAAG+AGG | + | chr1_4:44550495-44550514 | None:intergenic | 35.0% | |
CCTCTTTCTTTCTTGATTCA+AGG | - | chr1_4:44550492-44550511 | Msa0164770:intron | 35.0% | |
!!! | TCTATTTTAGAGTCTCGTCT+GGG | + | chr1_4:44550734-44550753 | None:intergenic | 35.0% |
ACCTTGAGTTTGTCTTAAGA+GGG | - | chr1_4:44550874-44550893 | Msa0164770:intron | 35.0% | |
AAATGAGGAAGATCTGTTCT+GGG | + | chr1_4:44551004-44551023 | None:intergenic | 35.0% | |
CATCATTATTCAAGGGTTTC+AGG | + | chr1_4:44551292-44551311 | None:intergenic | 35.0% | |
CATAGAGATCATAATGGCAA+AGG | + | chr1_4:44551382-44551401 | None:intergenic | 35.0% | |
CAGAGTATGAAGCATGAATA+TGG | + | chr1_4:44551407-44551426 | None:intergenic | 35.0% | |
!! | GCAAAGATTTGCTAAACTTC+TGG | - | chr1_4:44551462-44551481 | Msa0164770:intron | 35.0% |
! | CTTGCTATGAGGTTAGTATT+TGG | - | chr1_4:44551514-44551533 | Msa0164770:CDS | 35.0% |
TTAGTATTTGGTATCTGACG+TGG | - | chr1_4:44551526-44551545 | Msa0164770:CDS | 35.0% | |
! | GAGAAAAAGTACATAACCTG+CGG | - | chr1_4:44551692-44551711 | Msa0164770:intron | 35.0% |
GGATGAAATATGCTCCTAAA+AGG | - | chr1_4:44551713-44551732 | Msa0164770:intron | 35.0% | |
! | GACAACTGCTGACAAATTTT+TGG | - | chr1_4:44551854-44551873 | Msa0164770:intron | 35.0% |
GTGAACAATCGTGAATTGTT+AGG | + | chr1_4:44552144-44552163 | None:intergenic | 35.0% | |
TCAATATGTGAGAACTGTGA+TGG | - | chr1_4:44552275-44552294 | Msa0164770:intron | 35.0% | |
ATGTCCAATGCTACAACATA+AGG | + | chr1_4:44552370-44552389 | None:intergenic | 35.0% | |
!! | GAATCTTTTCTTGGAAGTAC+AGG | + | chr1_4:44552541-44552560 | None:intergenic | 35.0% |
! | TGAGCATGTGATAATGTAAC+TGG | + | chr1_4:44552563-44552582 | None:intergenic | 35.0% |
AAGTAATGGTAGTCAGCATT+TGG | + | chr1_4:44552731-44552750 | None:intergenic | 35.0% | |
CCAACAGGGAAGTAATTAAA+CGG | + | chr1_4:44552932-44552951 | None:intergenic | 35.0% | |
TGCAAGTACTTCTGTTTAAC+AGG | - | chr1_4:44552988-44553007 | Msa0164770:intron | 35.0% | |
GCAAGTACTTCTGTTTAACA+GGG | - | chr1_4:44552989-44553008 | Msa0164770:intron | 35.0% | |
TTCTGTTTAACAGGGACAAA+TGG | - | chr1_4:44552997-44553016 | Msa0164770:intron | 35.0% | |
TCTGTTTAACAGGGACAAAT+GGG | - | chr1_4:44552998-44553017 | Msa0164770:intron | 35.0% | |
ACAAGGATGGGTATTATCTT+AGG | + | chr1_4:44553458-44553477 | None:intergenic | 35.0% | |
ATGTGGAAAGAAACAAGGAT+GGG | + | chr1_4:44553470-44553489 | None:intergenic | 35.0% | |
! | GCTCTTATCTTTTACATCAC+TGG | - | chr1_4:44553503-44553522 | Msa0164770:intron | 35.0% |
ACATCACTGGATTACTGTAT+AGG | - | chr1_4:44553516-44553535 | Msa0164770:intron | 35.0% | |
TACTGTATAGGACGATATGA+AGG | - | chr1_4:44553528-44553547 | Msa0164770:intron | 35.0% | |
! | TTTTCCACCAGTATTTTGCA+AGG | + | chr1_4:44553632-44553651 | None:intergenic | 35.0% |
TTAAAGTCTGAAAACGAGCA+TGG | - | chr1_4:44553694-44553713 | Msa0164770:CDS | 35.0% | |
CAAGTAAAAAGGAAAGGAGA+AGG | - | chr1_4:44553767-44553786 | Msa0164770:intron | 35.0% | |
TGCAAGATCAGATGCTATAT+TGG | - | chr1_4:44553901-44553920 | Msa0164770:intron | 35.0% | |
AGGAATTGCCTTAAAAACAG+AGG | + | chr1_4:44554020-44554039 | None:intergenic | 35.0% | |
AATATAGTTCCTCCACCAAA+GGG | + | chr1_4:44554070-44554089 | None:intergenic | 35.0% | |
TAATATAGTTCCTCCACCAA+AGG | + | chr1_4:44554071-44554090 | None:intergenic | 35.0% | |
!! | GAGTTTTATGGTTGTATGAG+AGG | - | chr1_4:44554156-44554175 | Msa0164770:five_prime_UTR | 35.0% |
!!! | GCTGATATTTTGATAGGTTG+AGG | + | chr1_4:44554191-44554210 | None:intergenic | 35.0% |
!!! | TGCGTAGCTGATATTTTGAT+AGG | + | chr1_4:44554197-44554216 | None:intergenic | 35.0% |
TGAAGTTAGGGTTTATGGAG+GGG | + | chr1_4:44542550-44542569 | None:intergenic | 40.0% | |
CTTGAAGTTAGGGTTTATGG+AGG | + | chr1_4:44542552-44542571 | None:intergenic | 40.0% | |
AGACCTTGTTGGAGTGAAAA+CGG | + | chr1_4:44542581-44542600 | None:intergenic | 40.0% | |
TCCAGACAAAATGAGGAAGA+AGG | - | chr1_4:44542683-44542702 | Msa0164770:three_prime_UTR | 40.0% | |
! | ACCTTCTTCCTCATTTTGTC+TGG | + | chr1_4:44542687-44542706 | None:intergenic | 40.0% |
AGACAAAATGAGGAAGAAGG+TGG | - | chr1_4:44542686-44542705 | Msa0164770:three_prime_UTR | 40.0% | |
GTCACCGATAATGACAAACA+TGG | + | chr1_4:44542763-44542782 | None:intergenic | 40.0% | |
GCATAAATTCGGAACACTCT+TGG | + | chr1_4:44543008-44543027 | None:intergenic | 40.0% | |
GCAAGGCTCAAATCAAATCA+AGG | - | chr1_4:44543055-44543074 | Msa0164770:CDS | 40.0% | |
AGGAAAAGCTTGAACTAAGC+AGG | - | chr1_4:44543100-44543119 | Msa0164770:CDS | 40.0% | |
AGATGAAAAAATGACGACCC+AGG | - | chr1_4:44543257-44543276 | Msa0164770:intron | 40.0% | |
GATGAAAAAATGACGACCCA+GGG | - | chr1_4:44543258-44543277 | Msa0164770:intron | 40.0% | |
TCATTGTTTATGATAGGCGG+GGG | - | chr1_4:44543312-44543331 | Msa0164770:intron | 40.0% | |
ATACATCTCAGAAAGGTCAG+GGG | + | chr1_4:44543435-44543454 | None:intergenic | 40.0% | |
GGGTGAAATACATCTCAGAA+AGG | + | chr1_4:44543442-44543461 | None:intergenic | 40.0% | |
TAACGCCTCAAAATCCTACA+AGG | + | chr1_4:44543500-44543519 | None:intergenic | 40.0% | |
AGCAAGAACTATAGAGACAG+TGG | - | chr1_4:44543534-44543553 | Msa0164770:intron | 40.0% | |
AGAACTATAGAGACAGTGGA+AGG | - | chr1_4:44543538-44543557 | Msa0164770:intron | 40.0% | |
GGGCTATATAAACAGAAGAG+AGG | + | chr1_4:44543736-44543755 | None:intergenic | 40.0% | |
GTGAACCGCATGAAAAAATG+AGG | + | chr1_4:44543757-44543776 | None:intergenic | 40.0% | |
ATTCAGTTCGAAATCTGTCG+TGG | + | chr1_4:44543794-44543813 | None:intergenic | 40.0% | |
ACTATCAATTGCCTCCTGTA+AGG | - | chr1_4:44543854-44543873 | Msa0164770:intron | 40.0% | |
TAAACCAGTTCCTGTTGAAG+AGG | - | chr1_4:44543938-44543957 | Msa0164770:intron | 40.0% | |
AACAAGGATACCTCTTCAAC+AGG | + | chr1_4:44543951-44543970 | None:intergenic | 40.0% | |
AGCGGACAGTTAAAAAAGGA+AGG | + | chr1_4:44543993-44544012 | None:intergenic | 40.0% | |
ACAGAGCGGACAGTTAAAAA+AGG | + | chr1_4:44543997-44544016 | None:intergenic | 40.0% | |
! | TTTAACTGTCCGCTCTGTTT+TGG | - | chr1_4:44543999-44544018 | Msa0164770:intron | 40.0% |
CATATGCAACCAAAACAGAG+CGG | + | chr1_4:44544011-44544030 | None:intergenic | 40.0% | |
!!! | GCTCTGTTTTGGTTGCATAT+GGG | - | chr1_4:44544010-44544029 | Msa0164770:intron | 40.0% |
CATATGGGTTTCCAGATACT+TGG | - | chr1_4:44544025-44544044 | Msa0164770:intron | 40.0% | |
TATGGGTTTCCAGATACTTG+GGG | - | chr1_4:44544027-44544046 | Msa0164770:intron | 40.0% | |
CATCAGCCATAAGTAAAACC+AGG | + | chr1_4:44544105-44544124 | None:intergenic | 40.0% | |
TACTTATGGCTGATGTGTCT+TGG | - | chr1_4:44544110-44544129 | Msa0164770:intron | 40.0% | |
AAATAGTTCCTTTCTCCCTC+CGG | - | chr1_4:44544157-44544176 | Msa0164770:CDS | 40.0% | |
!! | GATTGTGTTTGGTGTTGGAT+TGG | - | chr1_4:44544251-44544270 | Msa0164770:intron | 40.0% |
GCCAATTTCAGTTGGCTATT+TGG | - | chr1_4:44544315-44544334 | Msa0164770:intron | 40.0% | |
GCCAAATAGCCAACTGAAAT+TGG | + | chr1_4:44544319-44544338 | None:intergenic | 40.0% | |
ATTGTAAAGATGCCAGAGAG+AGG | - | chr1_4:44544388-44544407 | Msa0164770:intron | 40.0% | |
TGCATAGATCATCCCATAAC+AGG | + | chr1_4:44544444-44544463 | None:intergenic | 40.0% | |
GGAGCTGAAGAAACTTAAAG+AGG | - | chr1_4:44544922-44544941 | Msa0164770:CDS | 40.0% | |
CTAAATGGAGATTTCCCTGT+TGG | - | chr1_4:44544947-44544966 | Msa0164770:intron | 40.0% | |
GTAGGCGATGAAAAGGTTAA+AGG | + | chr1_4:44545020-44545039 | None:intergenic | 40.0% | |
AAAACCAATTTGGCTGACCA+CGG | + | chr1_4:44545042-44545061 | None:intergenic | 40.0% | |
!!! | GCCAAATTGGTTTTTCTGTG+TGG | - | chr1_4:44545048-44545067 | Msa0164770:intron | 40.0% |
GCTCTTGGTTTATCAATTGC+TGG | - | chr1_4:44545204-44545223 | Msa0164770:intron | 40.0% | |
! | GTTTTCAAATTCTCCGGACT+GGG | + | chr1_4:44545359-44545378 | None:intergenic | 40.0% |
AAAAGAAAGAATCCAGACGC+AGG | - | chr1_4:44545699-44545718 | Msa0164770:CDS | 40.0% | |
AAAGAAAGAATCCAGACGCA+GGG | - | chr1_4:44545700-44545719 | Msa0164770:CDS | 40.0% | |
ATGAAACAAGTTCCCATGAG+GGG | + | chr1_4:44545873-44545892 | None:intergenic | 40.0% | |
CATGAAACAAGTTCCCATGA+GGG | + | chr1_4:44545874-44545893 | None:intergenic | 40.0% | |
TCATGAAACAAGTTCCCATG+AGG | + | chr1_4:44545875-44545894 | None:intergenic | 40.0% | |
ATCTCACTCAGTAACCAGTT+AGG | + | chr1_4:44546075-44546094 | None:intergenic | 40.0% | |
! | TCCCTTTTGCCTCATTTGTT+GGG | - | chr1_4:44546120-44546139 | Msa0164770:intron | 40.0% |
CCTATTCACATTGGAAACGA+TGG | + | chr1_4:44546234-44546253 | None:intergenic | 40.0% | |
CCATCGTTTCCAATGTGAAT+AGG | - | chr1_4:44546231-44546250 | Msa0164770:intron | 40.0% | |
CTTCATGCTCCTATTCACAT+TGG | + | chr1_4:44546243-44546262 | None:intergenic | 40.0% | |
CCTTACAACAGTAGCATTCT+TGG | + | chr1_4:44546293-44546312 | None:intergenic | 40.0% | |
CCAAGAATGCTACTGTTGTA+AGG | - | chr1_4:44546290-44546309 | Msa0164770:intron | 40.0% | |
TGGCAATGAACTTACCTGAA+TGG | + | chr1_4:44546344-44546363 | None:intergenic | 40.0% | |
! | GAAAGCTTTTCATGTTCGTG+TGG | + | chr1_4:44546500-44546519 | None:intergenic | 40.0% |
AAGACAGGAAGACCAGATAT+GGG | + | chr1_4:44546592-44546611 | None:intergenic | 40.0% | |
TTCCTGTCTTCCACTGTTAA+TGG | - | chr1_4:44546602-44546621 | Msa0164770:intron | 40.0% | |
TCCTGTCTTCCACTGTTAAT+GGG | - | chr1_4:44546603-44546622 | Msa0164770:intron | 40.0% | |
! | GGTATGACTGGTGTTTGTTT+TGG | - | chr1_4:44546624-44546643 | Msa0164770:intron | 40.0% |
AACTTGACTCTAGATGGGAA+CGG | + | chr1_4:44546702-44546721 | None:intergenic | 40.0% | |
TCCTTCATAACTTTGCATGG+GGG | + | chr1_4:44546798-44546817 | None:intergenic | 40.0% | |
AATATATAGGCAGAGTCGGT+TGG | - | chr1_4:44547235-44547254 | Msa0164770:intron | 40.0% | |
!! | GTATTTTTGTTTCCCAGCTG+TGG | + | chr1_4:44547279-44547298 | None:intergenic | 40.0% |
AATCCATCAGATATGCTCCT+GGG | - | chr1_4:44547489-44547508 | Msa0164770:intron | 40.0% | |
ATGCCATCCCTAATATTAGC+AGG | - | chr1_4:44547561-44547580 | Msa0164770:intron | 40.0% | |
GAACAACACAACCGTAAATG+GGG | + | chr1_4:44547639-44547658 | None:intergenic | 40.0% | |
CAGAACAACACAACCGTAAA+TGG | + | chr1_4:44547641-44547660 | None:intergenic | 40.0% | |
!! | GGTTGTGTTGTTCTGAAATC+AGG | - | chr1_4:44547646-44547665 | Msa0164770:intron | 40.0% |
TATAGATCACACTCACTTGC+TGG | + | chr1_4:44547678-44547697 | None:intergenic | 40.0% | |
! | TACTCTCTTTTCCTACCACA+AGG | - | chr1_4:44547713-44547732 | Msa0164770:intron | 40.0% |
CAGATTCGCTGAATGATGTT+GGG | - | chr1_4:44547763-44547782 | Msa0164770:intron | 40.0% | |
TGTATTCTTACAGCGGATGA+TGG | - | chr1_4:44547835-44547854 | Msa0164770:intron | 40.0% | |
GCCATCAATTGCAGATCATT+TGG | + | chr1_4:44547893-44547912 | None:intergenic | 40.0% | |
! | CACCACTTATTTGTGCTACT+TGG | - | chr1_4:44547926-44547945 | Msa0164770:intron | 40.0% |
TGATTCTTCGATTCATCCAC+CGG | + | chr1_4:44548035-44548054 | None:intergenic | 40.0% | |
TAAAGCAACGTAATGCCATG+AGG | + | chr1_4:44548118-44548137 | None:intergenic | 40.0% | |
! | CTCTCTTTTGATAGAACCCA+AGG | - | chr1_4:44548138-44548157 | Msa0164770:intron | 40.0% |
TATTCACAGGTTTGCCTTGA+GGG | - | chr1_4:44548270-44548289 | Msa0164770:intron | 40.0% | |
CATGGTATTTGATCTCCACA+AGG | + | chr1_4:44548345-44548364 | None:intergenic | 40.0% | |
CTTGTGGAGATCAAATACCA+TGG | - | chr1_4:44548343-44548362 | Msa0164770:CDS | 40.0% | |
! | AAGCAGTTGAGCTTTTGACA+CGG | - | chr1_4:44548566-44548585 | Msa0164770:intron | 40.0% |
GTGAACATTGCTAAGTACGA+AGG | + | chr1_4:44548608-44548627 | None:intergenic | 40.0% | |
TTACGGGAAATGTGATTGAG+TGG | - | chr1_4:44548864-44548883 | Msa0164770:CDS | 40.0% | |
CCAAACCCGTTTCTGTTATA+GGG | + | chr1_4:44549062-44549081 | None:intergenic | 40.0% | |
TCCAAACCCGTTTCTGTTAT+AGG | + | chr1_4:44549063-44549082 | None:intergenic | 40.0% | |
GTAGTTAATGGAAATTCCCG+CGG | + | chr1_4:44549149-44549168 | None:intergenic | 40.0% | |
AACACATTCAAGAGCCAACA+TGG | - | chr1_4:44549233-44549252 | Msa0164770:CDS | 40.0% | |
ATATAGTTCCATGTGGGAGT+TGG | - | chr1_4:44549278-44549297 | Msa0164770:intron | 40.0% | |
TTGGAAGGTAAAAGCGAACA+CGG | - | chr1_4:44549612-44549631 | Msa0164770:intron | 40.0% | |
ATTGTGTGATCAGATCACAC+AGG | + | chr1_4:44549663-44549682 | None:intergenic | 40.0% | |
TGATCTGATCACACAATCTC+TGG | - | chr1_4:44549666-44549685 | Msa0164770:intron | 40.0% | |
AATCCTGTGACCAAAAGCTA+CGG | + | chr1_4:44549737-44549756 | None:intergenic | 40.0% | |
CTCTTTGCCCTCAAAATAGT+GGG | - | chr1_4:44549797-44549816 | Msa0164770:intron | 40.0% | |
TCTCTATGGTGTTCAGCTAA+TGG | - | chr1_4:44550400-44550419 | Msa0164770:intron | 40.0% | |
CTCTATGGTGTTCAGCTAAT+GGG | - | chr1_4:44550401-44550420 | Msa0164770:intron | 40.0% | |
!!! | CTCTATTTTAGAGTCTCGTC+TGG | + | chr1_4:44550735-44550754 | None:intergenic | 40.0% |
!! | CAGACGAGACTCTAAAATAG+AGG | - | chr1_4:44550733-44550752 | Msa0164770:intron | 40.0% |
!! | GAGACTCTAAAATAGAGGTC+TGG | - | chr1_4:44550738-44550757 | Msa0164770:intron | 40.0% |
CACCTTGAGTTTGTCTTAAG+AGG | - | chr1_4:44550873-44550892 | Msa0164770:intron | 40.0% | |
CCTTGAGTTTGTCTTAAGAG+GGG | - | chr1_4:44550875-44550894 | Msa0164770:intron | 40.0% | |
CAAATGAGGAAGATCTGTTC+TGG | + | chr1_4:44551005-44551024 | None:intergenic | 40.0% | |
ACCTGATAGAATAACGTGAC+TGG | - | chr1_4:44551248-44551267 | Msa0164770:intron | 40.0% | |
!! | TGGAATACAAGCTTGCTATG+AGG | - | chr1_4:44551503-44551522 | Msa0164770:intron | 40.0% |
!!! | GATTTTTGGGTCTATGATGC+TGG | + | chr1_4:44551808-44551827 | None:intergenic | 40.0% |
TTGTCAGCAGTTGTCTTGAT+AGG | + | chr1_4:44551849-44551868 | None:intergenic | 40.0% | |
TCTAGTCGCTTCATATCATG+TGG | + | chr1_4:44551903-44551922 | None:intergenic | 40.0% | |
ACATGATATGAAGCGACTAG+AGG | - | chr1_4:44551902-44551921 | Msa0164770:intron | 40.0% | |
!! | CAATCTTGCTGACTTTCATC+TGG | - | chr1_4:44551935-44551954 | Msa0164770:intron | 40.0% |
!!! | TGACCAGTCCGATACTTTTT+TGG | - | chr1_4:44551999-44552018 | Msa0164770:intron | 40.0% |
!! | AGACCAAAAAAGTATCGGAC+TGG | + | chr1_4:44552005-44552024 | None:intergenic | 40.0% |
! | TGAATTGTTAGGGTGTTTGG+GGG | + | chr1_4:44552133-44552152 | None:intergenic | 40.0% |
! | GTGAATTGTTAGGGTGTTTG+GGG | + | chr1_4:44552134-44552153 | None:intergenic | 40.0% |
! | CGTGAATTGTTAGGGTGTTT+GGG | + | chr1_4:44552135-44552154 | None:intergenic | 40.0% |
! | TCGTGAATTGTTAGGGTGTT+TGG | + | chr1_4:44552136-44552155 | None:intergenic | 40.0% |
! | TAGGCCATTTAACTTAGGCA+GGG | + | chr1_4:44552326-44552345 | None:intergenic | 40.0% |
! | TTAGGCCATTTAACTTAGGC+AGG | + | chr1_4:44552327-44552346 | None:intergenic | 40.0% |
AATGGCCTAAAAAATGGTCC+AGG | - | chr1_4:44552337-44552356 | Msa0164770:intron | 40.0% | |
GTTGCCTTATGTTGTAGCAT+TGG | - | chr1_4:44552363-44552382 | Msa0164770:intron | 40.0% | |
! | CGAAGTTTAGGCCATTGATT+TGG | - | chr1_4:44552436-44552455 | Msa0164770:intron | 40.0% |
TCAGGACATTTCACACATTG+AGG | - | chr1_4:44552616-44552635 | Msa0164770:intron | 40.0% | |
TTTGGTTGTTCTTCGTCACT+TGG | + | chr1_4:44552713-44552732 | None:intergenic | 40.0% | |
CCGTTTAATTACTTCCCTGT+TGG | - | chr1_4:44552929-44552948 | Msa0164770:CDS | 40.0% | |
!! | TTTTTGACAAGGCACCAACA+GGG | + | chr1_4:44552946-44552965 | None:intergenic | 40.0% |
! | TTGGTGCCTTGTCAAAAAGA+TGG | - | chr1_4:44552948-44552967 | Msa0164770:intron | 40.0% |
CTGTTTAACAGGGACAAATG+GGG | - | chr1_4:44552999-44553018 | Msa0164770:intron | 40.0% | |
! | TCTACATGGTCTTGCATTCA+AGG | - | chr1_4:44553081-44553100 | Msa0164770:intron | 40.0% |
TAACTTACATCTTTCAGCCG+TGG | + | chr1_4:44553124-44553143 | None:intergenic | 40.0% | |
AACAGGCTCAAGATTAGTGA+AGG | + | chr1_4:44553286-44553305 | None:intergenic | 40.0% | |
AAGAGGGGGAAAAGAAAAAC+AGG | + | chr1_4:44553303-44553322 | None:intergenic | 40.0% | |
! | TTTCTTTTCCCCCTCTTTGT+CGG | - | chr1_4:44553306-44553325 | Msa0164770:intron | 40.0% |
! | GTTTTGTCCCTAGATTGTCA+TGG | - | chr1_4:44553338-44553357 | Msa0164770:intron | 40.0% |
AGAGGTTCCATGACAATCTA+GGG | + | chr1_4:44553348-44553367 | None:intergenic | 40.0% | |
AAGAGGTTCCATGACAATCT+AGG | + | chr1_4:44553349-44553368 | None:intergenic | 40.0% | |
TCATCCACAGAAACACTAAG+AGG | + | chr1_4:44553366-44553385 | None:intergenic | 40.0% | |
GATGTGGAAAGAAACAAGGA+TGG | + | chr1_4:44553471-44553490 | None:intergenic | 40.0% | |
GCTAGATTCTCCATCTTCAA+AGG | + | chr1_4:44553599-44553618 | None:intergenic | 40.0% | |
GACAATGCCTTGCAAAATAC+TGG | - | chr1_4:44553622-44553641 | Msa0164770:CDS | 40.0% | |
AATGCCTTGCAAAATACTGG+TGG | - | chr1_4:44553625-44553644 | Msa0164770:CDS | 40.0% | |
TTCTGCAATGCTTCTTCTCT+CGG | + | chr1_4:44553799-44553818 | None:intergenic | 40.0% | |
TGTACTTTGCGGTATTAACC+AGG | + | chr1_4:44553852-44553871 | None:intergenic | 40.0% | |
TACATGCCCACATTGAAGAA+AGG | - | chr1_4:44553868-44553887 | Msa0164770:intron | 40.0% | |
ACATGCCCACATTGAAGAAA+GGG | - | chr1_4:44553869-44553888 | Msa0164770:intron | 40.0% | |
ATTCCCCCTTTCTTCAATGT+GGG | + | chr1_4:44553877-44553896 | None:intergenic | 40.0% | |
! | TTCTTTTTCTCTCCCTTTGG+TGG | - | chr1_4:44554055-44554074 | Msa0164770:intron | 40.0% |
ACGGCAGAAGCTTGAAGTTA+GGG | + | chr1_4:44542562-44542581 | None:intergenic | 45.0% | |
AACGGCAGAAGCTTGAAGTT+AGG | + | chr1_4:44542563-44542582 | None:intergenic | 45.0% | |
GCGATAATGAGAGACCTTGT+TGG | + | chr1_4:44542592-44542611 | None:intergenic | 45.0% | |
!! | CCTCATTTTGTCTGGAACGA+AGG | + | chr1_4:44542679-44542698 | None:intergenic | 45.0% |
CCTTCGTTCCAGACAAAATG+AGG | - | chr1_4:44542676-44542695 | Msa0164770:three_prime_UTR | 45.0% | |
!! | GAAAATGCATCGGCTTTCTC+AGG | + | chr1_4:44543294-44543313 | None:intergenic | 45.0% |
AGAGTTCTTGGCAACACCTT+CGG | - | chr1_4:44543366-44543385 | Msa0164770:CDS | 45.0% | |
ACTATAGAGACAGTGGAAGG+AGG | - | chr1_4:44543541-44543560 | Msa0164770:intron | 45.0% | |
GCTAACCAGTTTGTACACGA+TGG | - | chr1_4:44543600-44543619 | Msa0164770:intron | 45.0% | |
CATCACCATCGTGTACAAAC+TGG | + | chr1_4:44543608-44543627 | None:intergenic | 45.0% | |
CAGTTTGTACACGATGGTGA+TGG | - | chr1_4:44543606-44543625 | Msa0164770:intron | 45.0% | |
GATACCTCTTCAACAGGAAC+TGG | + | chr1_4:44543945-44543964 | None:intergenic | 45.0% | |
!!! | CGCTCTGTTTTGGTTGCATA+TGG | - | chr1_4:44544009-44544028 | Msa0164770:intron | 45.0% |
ATGGGTTTCCAGATACTTGG+GGG | - | chr1_4:44544028-44544047 | Msa0164770:intron | 45.0% | |
TAAGGACACCCTCTAGTATC+CGG | + | chr1_4:44544179-44544198 | None:intergenic | 45.0% | |
!! | CTTGAGAGTACCACACTTCA+AGG | + | chr1_4:44544279-44544298 | None:intergenic | 45.0% |
AGCCAACTGAAATTGGCACT+GGG | + | chr1_4:44544312-44544331 | None:intergenic | 45.0% | |
TAGCCAACTGAAATTGGCAC+TGG | + | chr1_4:44544313-44544332 | None:intergenic | 45.0% | |
CTCTTTCTACTTCCTCTCTC+TGG | + | chr1_4:44544403-44544422 | None:intergenic | 45.0% | |
CAGAGAGAGGAAGTAGAAAG+AGG | - | chr1_4:44544401-44544420 | Msa0164770:intron | 45.0% | |
AGAGGGGAGTAATCCTGTTA+TGG | - | chr1_4:44544428-44544447 | Msa0164770:intron | 45.0% | |
GAGGGGAGTAATCCTGTTAT+GGG | - | chr1_4:44544429-44544448 | Msa0164770:intron | 45.0% | |
!! | TGCGCCTAGATGTGCTTTTT+AGG | + | chr1_4:44544517-44544536 | None:intergenic | 45.0% |
TTTGCACCTCAGTGAAAGAC+CGG | + | chr1_4:44544584-44544603 | None:intergenic | 45.0% | |
GGGACTATCAGAAGCTTATC+AGG | - | chr1_4:44544901-44544920 | Msa0164770:CDS | 45.0% | |
! | GGTTTTCAAATTCTCCGGAC+TGG | + | chr1_4:44545360-44545379 | None:intergenic | 45.0% |
TGCTTATATTCGAGACCGGA+AGG | - | chr1_4:44546017-44546036 | Msa0164770:intron | 45.0% | |
! | CTCCCTTTTGCCTCATTTGT+TGG | - | chr1_4:44546119-44546138 | Msa0164770:intron | 45.0% |
CCCCAACAAATGAGGCAAAA+GGG | + | chr1_4:44546124-44546143 | None:intergenic | 45.0% | |
!! | CCCTTTTGCCTCATTTGTTG+GGG | - | chr1_4:44546121-44546140 | Msa0164770:intron | 45.0% |
TCCCCAACAAATGAGGCAAA+AGG | + | chr1_4:44546125-44546144 | None:intergenic | 45.0% | |
! | TTGCCTCATTTGTTGGGGAA+AGG | - | chr1_4:44546126-44546145 | Msa0164770:intron | 45.0% |
! | TGCCTCATTTGTTGGGGAAA+GGG | - | chr1_4:44546127-44546146 | Msa0164770:intron | 45.0% |
AAAGACTTCACTGTTGGCAG+TGG | + | chr1_4:44546563-44546582 | None:intergenic | 45.0% | |
CCAAGCAAAGACTTCACTGT+TGG | + | chr1_4:44546569-44546588 | None:intergenic | 45.0% | |
CCAACAGTGAAGTCTTTGCT+TGG | - | chr1_4:44546566-44546585 | Msa0164770:intron | 45.0% | |
GAAGACAGGAAGACCAGATA+TGG | + | chr1_4:44546593-44546612 | None:intergenic | 45.0% | |
ACCCATTAACAGTGGAAGAC+AGG | + | chr1_4:44546607-44546626 | None:intergenic | 45.0% | |
CCAGTCATACCCATTAACAG+TGG | + | chr1_4:44546615-44546634 | None:intergenic | 45.0% | |
! | CCACTGTTAATGGGTATGAC+TGG | - | chr1_4:44546612-44546631 | Msa0164770:intron | 45.0% |
TCCCCCATGCAAAGTTATGA+AGG | - | chr1_4:44546794-44546813 | Msa0164770:intron | 45.0% | |
CCAAATGTCTGCTAAGAGCA+CGG | - | chr1_4:44546868-44546887 | Msa0164770:intron | 45.0% | |
GAATCCATCAGATATGCTCC+TGG | - | chr1_4:44547488-44547507 | Msa0164770:intron | 45.0% | |
ATCCATCAGATATGCTCCTG+GGG | - | chr1_4:44547490-44547509 | Msa0164770:intron | 45.0% | |
CCAACATCATTCAGCGAATC+TGG | + | chr1_4:44547765-44547784 | None:intergenic | 45.0% | |
CCAGATTCGCTGAATGATGT+TGG | - | chr1_4:44547762-44547781 | Msa0164770:intron | 45.0% | |
ATTCGCTGAATGATGTTGGG+TGG | - | chr1_4:44547766-44547785 | Msa0164770:intron | 45.0% | |
TTCGCTGAATGATGTTGGGT+GGG | - | chr1_4:44547767-44547786 | Msa0164770:intron | 45.0% | |
AGCACAAATAAGTGGTGTGC+TGG | + | chr1_4:44547923-44547942 | None:intergenic | 45.0% | |
TATTTGTATGACAGGACCGG+TGG | - | chr1_4:44548016-44548035 | Msa0164770:intron | 45.0% | |
CTATTCACAGGTTTGCCTTG+AGG | - | chr1_4:44548269-44548288 | Msa0164770:intron | 45.0% | |
ATTCACAGGTTTGCCTTGAG+GGG | - | chr1_4:44548271-44548290 | Msa0164770:intron | 45.0% | |
GCTATCCAAAGTTTGAGCCA+TGG | - | chr1_4:44548312-44548331 | Msa0164770:CDS | 45.0% | |
GATGACCATGGCTCAAACTT+TGG | + | chr1_4:44548320-44548339 | None:intergenic | 45.0% | |
CACACATCCTAGTGCAATGA+GGG | - | chr1_4:44548434-44548453 | Msa0164770:CDS | 45.0% | |
GAAGTTACCCTCATTGCACT+AGG | + | chr1_4:44548444-44548463 | None:intergenic | 45.0% | |
! | CCCTATAACAGAAACGGGTT+TGG | - | chr1_4:44549059-44549078 | Msa0164770:CDS | 45.0% |
CATGTGCTCTCACACTATTG+TGG | + | chr1_4:44549125-44549144 | None:intergenic | 45.0% | |
! | CACAATAGTGTGAGAGCACA+TGG | - | chr1_4:44549123-44549142 | Msa0164770:intron | 45.0% |
TTCATCTTCCAACTCCCACA+TGG | + | chr1_4:44549289-44549308 | None:intergenic | 45.0% | |
CAGAGGGAGATGTCAACAAT+TGG | - | chr1_4:44549450-44549469 | Msa0164770:intron | 45.0% | |
ACAATTGGATTCATGTGGGG+TGG | - | chr1_4:44549465-44549484 | Msa0164770:intron | 45.0% | |
TTCATGTGGGGTGGTTGAAA+TGG | - | chr1_4:44549474-44549493 | Msa0164770:intron | 45.0% | |
TGTTGTATGAGGCGGAGTAT+TGG | - | chr1_4:44549593-44549612 | Msa0164770:intron | 45.0% | |
TGGAAGGTAAAAGCGAACAC+GGG | - | chr1_4:44549613-44549632 | Msa0164770:intron | 45.0% | |
! | AAAGTAGCCTTGCGACTTCA+TGG | - | chr1_4:44549711-44549730 | Msa0164770:intron | 45.0% |
GCTCTTTGCCCTCAAAATAG+TGG | - | chr1_4:44549796-44549815 | Msa0164770:intron | 45.0% | |
!! | TGAGGCTCCCACTATTTTGA+GGG | + | chr1_4:44549807-44549826 | None:intergenic | 45.0% |
! | ATGAGGCTCCCACTATTTTG+AGG | + | chr1_4:44549808-44549827 | None:intergenic | 45.0% |
!! | TTTTGGTAGCACCATGCATG+AGG | + | chr1_4:44549825-44549844 | None:intergenic | 45.0% |
AGTTACAGAAGCTGCAGAGA+AGG | - | chr1_4:44550074-44550093 | Msa0164770:intron | 45.0% | |
ATATGCTGCTGCCCCTTAAA+TGG | - | chr1_4:44550359-44550378 | Msa0164770:intron | 45.0% | |
TGAACACCATAGAGAAGCCA+AGG | + | chr1_4:44550395-44550414 | None:intergenic | 45.0% | |
GTAAGGAGGACGAAAAAGAG+AGG | - | chr1_4:44550652-44550671 | Msa0164770:intron | 45.0% | |
TTCCCTCTGCAAATTAAGGG+TGG | - | chr1_4:44550836-44550855 | Msa0164770:intron | 45.0% | |
TCCCTCTGCAAATTAAGGGT+GGG | - | chr1_4:44550837-44550856 | Msa0164770:intron | 45.0% | |
CCCCTCTTAAGACAAACTCA+AGG | + | chr1_4:44550878-44550897 | None:intergenic | 45.0% | |
CGCAGATGTACTAGCAAATG+AGG | + | chr1_4:44551019-44551038 | None:intergenic | 45.0% | |
TGCTAGTACATCTGCGTGAA+AGG | - | chr1_4:44551023-44551042 | Msa0164770:intron | 45.0% | |
GCTTCTTCCAAAAGCGAAAG+AGG | + | chr1_4:44551099-44551118 | None:intergenic | 45.0% | |
GGAATCTGGCCAATGTAGAA+AGG | + | chr1_4:44551133-44551152 | None:intergenic | 45.0% | |
GCCAGTCACGTTATTCTATC+AGG | + | chr1_4:44551252-44551271 | None:intergenic | 45.0% | |
! | TTTGGTCCATTTTACCAGGG+TGG | - | chr1_4:44551347-44551366 | Msa0164770:CDS | 45.0% |
! | TTGGTCCATTTTACCAGGGT+GGG | - | chr1_4:44551348-44551367 | Msa0164770:CDS | 45.0% |
ATGAACCCACCCTGGTAAAA+TGG | + | chr1_4:44551356-44551375 | None:intergenic | 45.0% | |
CAAGCTTGTATTCCATGCCA+CGG | + | chr1_4:44551498-44551517 | None:intergenic | 45.0% | |
! | TTGGTATCTGACGTGGACTA+TGG | - | chr1_4:44551533-44551552 | Msa0164770:CDS | 45.0% |
CAGCAGACTCCTATAACTCA+AGG | + | chr1_4:44551563-44551582 | None:intergenic | 45.0% | |
! | TAGGAGCATATTTCATCCGC+AGG | + | chr1_4:44551711-44551730 | None:intergenic | 45.0% |
GAACAGCTAGGACTTAAGAG+TGG | + | chr1_4:44552049-44552068 | None:intergenic | 45.0% | |
TCAAGAGAGTGAGAACAGCT+AGG | + | chr1_4:44552061-44552080 | None:intergenic | 45.0% | |
GAAGCCCTGCCTAAGTTAAA+TGG | - | chr1_4:44552319-44552338 | Msa0164770:intron | 45.0% | |
GCCTAAAAAATGGTCCAGGA+CGG | - | chr1_4:44552341-44552360 | Msa0164770:intron | 45.0% | |
!!! | ACCGTCCTGGACCATTTTTT+AGG | + | chr1_4:44552345-44552364 | None:intergenic | 45.0% |
!! | CTTTTTGACAAGGCACCAAC+AGG | + | chr1_4:44552947-44552966 | None:intergenic | 45.0% |
TTAACAGGGACAAATGGGGT+TGG | - | chr1_4:44553003-44553022 | Msa0164770:intron | 45.0% | |
AGATCGAATCAACCATGCCA+CGG | - | chr1_4:44553104-44553123 | Msa0164770:intron | 45.0% | |
! | ATGCAAGTGCTGCAGTATGT+AGG | - | chr1_4:44553220-44553239 | Msa0164770:CDS | 45.0% |
! | TGCAAGTGCTGCAGTATGTA+GGG | - | chr1_4:44553221-44553240 | Msa0164770:CDS | 45.0% |
! | TTCTTTTCCCCCTCTTTGTC+GGG | - | chr1_4:44553307-44553326 | Msa0164770:intron | 45.0% |
AGAAGAAACCCGACAAAGAG+GGG | + | chr1_4:44553318-44553337 | None:intergenic | 45.0% | |
CAGAAGAAACCCGACAAAGA+GGG | + | chr1_4:44553319-44553338 | None:intergenic | 45.0% | |
ACAGAAGAAACCCGACAAAG+AGG | + | chr1_4:44553320-44553339 | None:intergenic | 45.0% | |
! | GGAACCTCTTAGTGTTTCTG+TGG | - | chr1_4:44553359-44553378 | Msa0164770:CDS | 45.0% |
TGGATGAAGACCTCAACGAT+GGG | - | chr1_4:44553379-44553398 | Msa0164770:CDS | 45.0% | |
ACTGGTGGAAAAATACCCAC+AGG | - | chr1_4:44553640-44553659 | Msa0164770:CDS | 45.0% | |
ATACTGACAAGACCACCTGT+GGG | + | chr1_4:44553658-44553677 | None:intergenic | 45.0% | |
TATACTGACAAGACCACCTG+TGG | + | chr1_4:44553659-44553678 | None:intergenic | 45.0% | |
AAGTCTGAAAACGAGCATGG+AGG | - | chr1_4:44553697-44553716 | Msa0164770:CDS | 45.0% | |
GAGTGATAAAAAGCGGCGTA+TGG | - | chr1_4:44553726-44553745 | Msa0164770:intron | 45.0% | |
GAACAAGTCATTCCGATGTC+AGG | - | chr1_4:44553816-44553835 | Msa0164770:intron | 45.0% | |
! | ATTCCGATGTCAGGCATTGT+TGG | - | chr1_4:44553825-44553844 | Msa0164770:intron | 45.0% |
CAATGTGGGCATGTACTTTG+CGG | + | chr1_4:44553863-44553882 | None:intergenic | 45.0% | |
CATGCCCACATTGAAGAAAG+GGG | - | chr1_4:44553870-44553889 | Msa0164770:intron | 45.0% | |
ATGCCCACATTGAAGAAAGG+GGG | - | chr1_4:44553871-44553890 | Msa0164770:intron | 45.0% | |
CATTCCCCCTTTCTTCAATG+TGG | + | chr1_4:44553878-44553897 | None:intergenic | 45.0% | |
TCTCCTTGTCTTGCTCTTGA+TGG | - | chr1_4:44553925-44553944 | Msa0164770:intron | 45.0% | |
AAGCCATCAAGAGCAAGACA+AGG | + | chr1_4:44553931-44553950 | None:intergenic | 45.0% | |
! | TCTTGCTCTTGATGGCTTAG+TGG | - | chr1_4:44553933-44553952 | Msa0164770:intron | 45.0% |
! | TTTTTCTCTCCCTTTGGTGG+AGG | - | chr1_4:44554058-44554077 | Msa0164770:intron | 45.0% |
!!! | GAATATTAATTTAATTTTTA+TGG | + | chr1_4:44552227-44552246 | None:intergenic | 5.0% |
!!! | CTGCCGTTTTCACTCCAACA+AGG | - | chr1_4:44542575-44542594 | Msa0164770:three_prime_UTR | 50.0% |
! | AATGACGACCCAGGGTCTTT+TGG | - | chr1_4:44543266-44543285 | Msa0164770:intron | 50.0% |
CTCAGGATCCAAAAGACCCT+GGG | + | chr1_4:44543277-44543296 | None:intergenic | 50.0% | |
TCTCAGGATCCAAAAGACCC+TGG | + | chr1_4:44543278-44543297 | None:intergenic | 50.0% | |
GAGTTCTTGGCAACACCTTC+GGG | - | chr1_4:44543367-44543386 | Msa0164770:CDS | 50.0% | |
CTGAAGAACACACATCCCGA+AGG | + | chr1_4:44543385-44543404 | None:intergenic | 50.0% | |
CTTCGGGATGTGTGTTCTTC+AGG | - | chr1_4:44543383-44543402 | Msa0164770:intron | 50.0% | |
ATAGAGACAGTGGAAGGAGG+AGG | - | chr1_4:44543544-44543563 | Msa0164770:intron | 50.0% | |
TAGAGACAGTGGAAGGAGGA+GGG | - | chr1_4:44543545-44543564 | Msa0164770:intron | 50.0% | |
TGTCGTGGACATCCTGCAAT+CGG | + | chr1_4:44543779-44543798 | None:intergenic | 50.0% | |
TCGAACTGAATCCCACTCTC+AGG | - | chr1_4:44543803-44543822 | Msa0164770:intron | 50.0% | |
AATCCCACTCTCAGGCTACA+GGG | - | chr1_4:44543811-44543830 | Msa0164770:intron | 50.0% | |
TGGGTTTCCAGATACTTGGG+GGG | - | chr1_4:44544029-44544048 | Msa0164770:intron | 50.0% | |
TCTAGTATCCGGAGGGAGAA+AGG | + | chr1_4:44544168-44544187 | None:intergenic | 50.0% | |
TTTCTCCCTCCGGATACTAG+AGG | - | chr1_4:44544167-44544186 | Msa0164770:CDS | 50.0% | |
TTCTCCCTCCGGATACTAGA+GGG | - | chr1_4:44544168-44544187 | Msa0164770:CDS | 50.0% | |
! | TGGATTGGGACCTTGAAGTG+TGG | - | chr1_4:44544266-44544285 | Msa0164770:intron | 50.0% |
! | AACTGAAATTGGCACTGGGG+AGG | + | chr1_4:44544308-44544327 | None:intergenic | 50.0% |
TCCCCAGTGCCAATTTCAGT+TGG | - | chr1_4:44544307-44544326 | Msa0164770:intron | 50.0% | |
GCCAACTGAAATTGGCACTG+GGG | + | chr1_4:44544311-44544330 | None:intergenic | 50.0% | |
ATGTTGCCGGTCTTTCACTG+AGG | - | chr1_4:44544575-44544594 | Msa0164770:intron | 50.0% | |
TGGCTACCCACAAAGGGAAT+GGG | + | chr1_4:44544813-44544832 | None:intergenic | 50.0% | |
TTGGCTACCCACAAAGGGAA+TGG | + | chr1_4:44544814-44544833 | None:intergenic | 50.0% | |
TCTGCTTGGCTACCCACAAA+GGG | + | chr1_4:44544819-44544838 | None:intergenic | 50.0% | |
TTCTGCTTGGCTACCCACAA+AGG | + | chr1_4:44544820-44544839 | None:intergenic | 50.0% | |
ATTGATGCTGCAGGACTCAG+AGG | - | chr1_4:44544880-44544899 | Msa0164770:CDS | 50.0% | |
TTGATGCTGCAGGACTCAGA+GGG | - | chr1_4:44544881-44544900 | Msa0164770:CDS | 50.0% | |
TCCCTGTTGGACCACTGATA+CGG | - | chr1_4:44544960-44544979 | Msa0164770:intron | 50.0% | |
TCCGTATCAGTGGTCCAACA+GGG | + | chr1_4:44544964-44544983 | None:intergenic | 50.0% | |
TTCCGTATCAGTGGTCCAAC+AGG | + | chr1_4:44544965-44544984 | None:intergenic | 50.0% | |
TAATCCTACCTGGTCCAACG+TGG | + | chr1_4:44544993-44545012 | None:intergenic | 50.0% | |
! | AACCTTTTCATCGCCTACCG+TGG | - | chr1_4:44545022-44545041 | Msa0164770:intron | 50.0% |
! | CAAGAGCAGCTGATTTCCCA+CGG | + | chr1_4:44545191-44545210 | None:intergenic | 50.0% |
!! | ATTGCTGGTGCTATTGCTGC+CGG | - | chr1_4:44545219-44545238 | Msa0164770:intron | 50.0% |
CTTTGTTACTGCACCCAGTC+CGG | - | chr1_4:44545343-44545362 | Msa0164770:intron | 50.0% | |
! | GCCTCATTTGTTGGGGAAAG+GGG | - | chr1_4:44546128-44546147 | Msa0164770:intron | 50.0% |
TCCCCTTTCCCCAACAAATG+AGG | + | chr1_4:44546132-44546151 | None:intergenic | 50.0% | |
GTTGGGGAAAGGGGAGTAAA+TGG | - | chr1_4:44546137-44546156 | Msa0164770:intron | 50.0% | |
GCATCACAGACAGACCATTC+AGG | - | chr1_4:44546327-44546346 | Msa0164770:intron | 50.0% | |
GTCTTTGCTTGGCCCATATC+TGG | - | chr1_4:44546577-44546596 | Msa0164770:intron | 50.0% | |
GACTCTAGATGGGAACGGAA+GGG | + | chr1_4:44546697-44546716 | None:intergenic | 50.0% | |
TGACTCTAGATGGGAACGGA+AGG | + | chr1_4:44546698-44546717 | None:intergenic | 50.0% | |
CCGTGCTCTTAGCAGACATT+TGG | + | chr1_4:44546871-44546890 | None:intergenic | 50.0% | |
! | AATGTCTGCTAAGAGCACGG+AGG | - | chr1_4:44546871-44546890 | Msa0164770:intron | 50.0% |
! | ATGTCTGCTAAGAGCACGGA+GGG | - | chr1_4:44546872-44546891 | Msa0164770:intron | 50.0% |
! | ATCCCCAGGAGCATATCTGA+TGG | + | chr1_4:44547495-44547514 | None:intergenic | 50.0% |
CAGCTTTCAATAGGATCCCC+AGG | + | chr1_4:44547509-44547528 | None:intergenic | 50.0% | |
CTGGGGATCCTATTGAAAGC+TGG | - | chr1_4:44547507-44547526 | Msa0164770:intron | 50.0% | |
! | AGATCACACTCACTTGCTGG+AGG | + | chr1_4:44547675-44547694 | None:intergenic | 50.0% |
AGCCATGGTCATCAACCTTG+TGG | - | chr1_4:44548327-44548346 | Msa0164770:CDS | 50.0% | |
!! | CTCCACAAGGTTGATGACCA+TGG | + | chr1_4:44548332-44548351 | None:intergenic | 50.0% |
ATGCGAGCTCCTGAAAGTGA+AGG | + | chr1_4:44548402-44548421 | None:intergenic | 50.0% | |
CCTCATTGCACTAGGATGTG+TGG | + | chr1_4:44548436-44548455 | None:intergenic | 50.0% | |
CCACACATCCTAGTGCAATG+AGG | - | chr1_4:44548433-44548452 | Msa0164770:CDS | 50.0% | |
AATGTCTGAGAGGTCCACCA+CGG | - | chr1_4:44548927-44548946 | Msa0164770:intron | 50.0% | |
ATGGGCACAAAGTTGACCGT+TGG | + | chr1_4:44549180-44549199 | None:intergenic | 50.0% | |
TGGGGTGGTTGAAATGGAAG+AGG | - | chr1_4:44549480-44549499 | Msa0164770:intron | 50.0% | |
GGGGTGGTTGAAATGGAAGA+GGG | - | chr1_4:44549481-44549500 | Msa0164770:intron | 50.0% | |
!! | GTATGAGGCGGAGTATTGGA+AGG | - | chr1_4:44549597-44549616 | Msa0164770:intron | 50.0% |
! | GACTTCATGGCCGTAGCTTT+TGG | - | chr1_4:44549724-44549743 | Msa0164770:intron | 50.0% |
! | AATAGTGGGAGCCTCATGCA+TGG | - | chr1_4:44549811-44549830 | Msa0164770:intron | 50.0% |
TTCTTTGCAGGCAATGCAGC+AGG | - | chr1_4:44550437-44550456 | Msa0164770:CDS | 50.0% | |
TCTTTGCAGGCAATGCAGCA+GGG | - | chr1_4:44550438-44550457 | Msa0164770:CDS | 50.0% | |
!! | GCCCACCCTTAATTTGCAGA+GGG | + | chr1_4:44550841-44550860 | None:intergenic | 50.0% |
!! | CGAGATAATGGAGCTTCTCC+GGG | + | chr1_4:44551051-44551070 | None:intergenic | 50.0% |
!! | CCGAGATAATGGAGCTTCTC+CGG | + | chr1_4:44551052-44551071 | None:intergenic | 50.0% |
CCGGAGAAGCTCCATTATCT+CGG | - | chr1_4:44551049-44551068 | Msa0164770:intron | 50.0% | |
CAAAGGAGACGCCGAGATAA+TGG | + | chr1_4:44551063-44551082 | None:intergenic | 50.0% | |
CATTATCTCGGCGTCTCCTT+TGG | - | chr1_4:44551061-44551080 | Msa0164770:intron | 50.0% | |
CCAAAAGCGAAAGAGGTCCA+CGG | + | chr1_4:44551092-44551111 | None:intergenic | 50.0% | |
AAAGGAAGATGAACCCACCC+TGG | + | chr1_4:44551364-44551383 | None:intergenic | 50.0% | |
GTATTCCATGCCACGGAAAG+TGG | + | chr1_4:44551491-44551510 | None:intergenic | 50.0% | |
! | TGTTAGGGTGTTTGGGGGAA+GGG | + | chr1_4:44552128-44552147 | None:intergenic | 50.0% |
! | TTGTTAGGGTGTTTGGGGGA+AGG | + | chr1_4:44552129-44552148 | None:intergenic | 50.0% |
ACAACATAAGGCAACCGTCC+TGG | + | chr1_4:44552358-44552377 | None:intergenic | 50.0% | |
! | GCTTGTGTGTTACTCTGCAC+AGG | - | chr1_4:44552584-44552603 | Msa0164770:intron | 50.0% |
AGGGACAAATGGGGTTGGAA+AGG | - | chr1_4:44553008-44553027 | Msa0164770:intron | 50.0% | |
TACATCTTTCAGCCGTGGCA+TGG | + | chr1_4:44553119-44553138 | None:intergenic | 50.0% | |
TACTGCAGCACTTGCATGTG+AGG | + | chr1_4:44553217-44553236 | None:intergenic | 50.0% | |
GAAGAAACCCGACAAAGAGG+GGG | + | chr1_4:44553317-44553336 | None:intergenic | 50.0% | |
GTGGATGAAGACCTCAACGA+TGG | - | chr1_4:44553378-44553397 | Msa0164770:CDS | 50.0% | |
GGATGAAGACCTCAACGATG+GGG | - | chr1_4:44553380-44553399 | Msa0164770:CDS | 50.0% | |
CTTGTTTAGCCCCATCGTTG+AGG | + | chr1_4:44553392-44553411 | None:intergenic | 50.0% | |
CGATGGGGCTAAACAAGTTG+AGG | - | chr1_4:44553395-44553414 | Msa0164770:CDS | 50.0% | |
TCACTCCTGAATTGCTCCAG+CGG | - | chr1_4:44553569-44553588 | Msa0164770:intron | 50.0% | |
! | CATCTTCAAAGGCATACCGC+TGG | + | chr1_4:44553588-44553607 | None:intergenic | 50.0% |
! | CAGCGGTATGCCTTTGAAGA+TGG | - | chr1_4:44553586-44553605 | Msa0164770:intron | 50.0% |
GGTGGAAAAATACCCACAGG+TGG | - | chr1_4:44553643-44553662 | Msa0164770:CDS | 50.0% | |
GGACCAACAATGCCTGACAT+CGG | + | chr1_4:44553831-44553850 | None:intergenic | 50.0% | |
! | ATGTCAGGCATTGTTGGTCC+TGG | - | chr1_4:44553831-44553850 | Msa0164770:intron | 50.0% |
CGGTGACAAATCCCGTGATC+AGG | - | chr1_4:44542776-44542795 | Msa0164770:three_prime_UTR | 55.0% | |
! | TCATGCGGTTCACCGATTGC+AGG | - | chr1_4:44543764-44543783 | Msa0164770:intron | 55.0% |
GAATCCCACTCTCAGGCTAC+AGG | - | chr1_4:44543810-44543829 | Msa0164770:intron | 55.0% | |
CATGACCACGCATGCCTTAC+AGG | + | chr1_4:44543871-44543890 | None:intergenic | 55.0% | |
CTGTAAGGCATGCGTGGTCA+TGG | - | chr1_4:44543869-44543888 | Msa0164770:intron | 55.0% | |
GGGTTTCCAGATACTTGGGG+GGG | - | chr1_4:44544030-44544049 | Msa0164770:intron | 55.0% | |
GGTTTCCAGATACTTGGGGG+GGG | - | chr1_4:44544031-44544050 | Msa0164770:intron | 55.0% | |
GTTTCCAGATACTTGGGGGG+GGG | - | chr1_4:44544032-44544051 | Msa0164770:intron | 55.0% | |
TTTCCAGATACTTGGGGGGG+GGG | - | chr1_4:44544033-44544052 | Msa0164770:intron | 55.0% | |
GACACCCTCTAGTATCCGGA+GGG | + | chr1_4:44544175-44544194 | None:intergenic | 55.0% | |
GTCCTCCCCATTCCCTTTGT+GGG | - | chr1_4:44544804-44544823 | Msa0164770:CDS | 55.0% | |
TACCCACAAAGGGAATGGGG+AGG | + | chr1_4:44544809-44544828 | None:intergenic | 55.0% | |
GGCTACCCACAAAGGGAATG+GGG | + | chr1_4:44544812-44544831 | None:intergenic | 55.0% | |
! | GTGGAGCACTTCCGTATCAG+TGG | + | chr1_4:44544974-44544993 | None:intergenic | 55.0% |
!! | GATACGGAAGTGCTCCACGT+TGG | - | chr1_4:44544976-44544995 | Msa0164770:intron | 55.0% |
GACCACGGTAGGCGATGAAA+AGG | + | chr1_4:44545027-44545046 | None:intergenic | 55.0% | |
CCAATTTGGCTGACCACGGT+AGG | + | chr1_4:44545038-44545057 | None:intergenic | 55.0% | |
CCTACCGTGGTCAGCCAAAT+TGG | - | chr1_4:44545035-44545054 | Msa0164770:intron | 55.0% | |
CGTGGGAAATCAGCTGCTCT+TGG | - | chr1_4:44545189-44545208 | Msa0164770:intron | 55.0% | |
!! | TTGCTGGTGCTATTGCTGCC+GGG | - | chr1_4:44545220-44545239 | Msa0164770:intron | 55.0% |
! | GTCTGAAAAGCACGGGTACC+CGG | + | chr1_4:44545241-44545260 | None:intergenic | 55.0% |
GACGAGATATCTGCCCCTCA+AGG | + | chr1_4:44548287-44548306 | None:intergenic | 55.0% | |
!! | GAAGTAAAGTGCTGCCGTGG+TGG | + | chr1_4:44548944-44548963 | None:intergenic | 55.0% |
!! | TGGGAAGTAAAGTGCTGCCG+TGG | + | chr1_4:44548947-44548966 | None:intergenic | 55.0% |
! | TGGCCGTAGCTTTTGGTCAC+AGG | - | chr1_4:44549731-44549750 | Msa0164770:intron | 55.0% |
!! | CGCCCACCCTTAATTTGCAG+AGG | + | chr1_4:44550842-44550861 | None:intergenic | 55.0% |
AGCGAAAGAGGTCCACGGTT+AGG | + | chr1_4:44551087-44551106 | None:intergenic | 55.0% | |
! | CCGTGGACCTCTTTCGCTTT+TGG | - | chr1_4:44551089-44551108 | Msa0164770:intron | 55.0% |
GACTGGCGAGCATTCATGCA+TGG | - | chr1_4:44551265-44551284 | Msa0164770:intron | 55.0% | |
!! | CTTCTGGCTTCCACTTTCCG+TGG | - | chr1_4:44551478-44551497 | Msa0164770:intron | 55.0% |
! | TTAGGGTGTTTGGGGGAAGG+GGG | + | chr1_4:44552126-44552145 | None:intergenic | 55.0% |
! | GTTAGGGTGTTTGGGGGAAG+GGG | + | chr1_4:44552127-44552146 | None:intergenic | 55.0% |
CTGCACAGGTCTGCAGAATC+AGG | - | chr1_4:44552598-44552617 | Msa0164770:intron | 55.0% | |
GCATACCGCTGGAGCAATTC+AGG | + | chr1_4:44553577-44553596 | None:intergenic | 55.0% | |
ACGCCCTGTAGCCTGAGAGT+GGG | + | chr1_4:44543817-44543836 | None:intergenic | 60.0% | |
AACGCCCTGTAGCCTGAGAG+TGG | + | chr1_4:44543818-44543837 | None:intergenic | 60.0% | |
TGCCTCCTGTAAGGCATGCG+TGG | - | chr1_4:44543863-44543882 | Msa0164770:intron | 60.0% | |
GACCACGCATGCCTTACAGG+AGG | + | chr1_4:44543868-44543887 | None:intergenic | 60.0% | |
TTCCAGATACTTGGGGGGGG+GGG | - | chr1_4:44544034-44544053 | Msa0164770:intron | 60.0% | |
GGACACCCTCTAGTATCCGG+AGG | + | chr1_4:44544176-44544195 | None:intergenic | 60.0% | |
CGTCCTCCCCATTCCCTTTG+TGG | - | chr1_4:44544803-44544822 | Msa0164770:CDS | 60.0% | |
! | GAAGTGCTCCACGTTGGACC+AGG | - | chr1_4:44544982-44545001 | Msa0164770:intron | 60.0% |
TGCTCCACGTTGGACCAGGT+AGG | - | chr1_4:44544986-44545005 | Msa0164770:intron | 60.0% | |
! | GTTGCCTTGTTCGCTGCTCG+TGG | - | chr1_4:44545165-44545184 | Msa0164770:intron | 60.0% |
CTAAGACAGTGCCCTGCGTC+TGG | + | chr1_4:44545714-44545733 | None:intergenic | 60.0% | |
!! | CAGACGCAGGGCACTGTCTT+AGG | - | chr1_4:44545712-44545731 | Msa0164770:CDS | 60.0% |
! | AGTGTGAGAGCACATGGCCG+CGG | - | chr1_4:44549129-44549148 | Msa0164770:intron | 60.0% |
GCTACGGCCATGAAGTCGCA+AGG | + | chr1_4:44549721-44549740 | None:intergenic | 60.0% | |
!! | ACATCTGCGTGAAAGGCGCC+CGG | - | chr1_4:44551030-44551049 | Msa0164770:intron | 60.0% |
CGTCTCCTTTGGCCTAACCG+TGG | - | chr1_4:44551072-44551091 | Msa0164770:intron | 60.0% | |
GAGGTCCACGGTTAGGCCAA+AGG | + | chr1_4:44551080-44551099 | None:intergenic | 60.0% | |
GGCTTCCACTTTCCGTGGCA+TGG | - | chr1_4:44551483-44551502 | Msa0164770:intron | 60.0% | |
TCCAGATACTTGGGGGGGGG+GGG | - | chr1_4:44544035-44544054 | Msa0164770:intron | 65.0% | |
ACGGCCACGAGCAGCGAACA+AGG | + | chr1_4:44545172-44545191 | None:intergenic | 65.0% | |
TTGTTCGCTGCTCGTGGCCG+TGG | - | chr1_4:44545171-44545190 | Msa0164770:intron | 65.0% | |
TGTTCGCTGCTCGTGGCCGT+GGG | - | chr1_4:44545172-44545191 | Msa0164770:intron | 65.0% | |
! | GCTAAGAGCACGGAGGGTGC+AGG | - | chr1_4:44546878-44546897 | Msa0164770:intron | 65.0% |
! | GAGCACGGAGGGTGCAGGTA+TGG | - | chr1_4:44546883-44546902 | Msa0164770:intron | 65.0% |
! | GTGTGAGAGCACATGGCCGC+GGG | - | chr1_4:44549130-44549149 | Msa0164770:intron | 65.0% |
CCAGATACTTGGGGGGGGGG+GGG | - | chr1_4:44544036-44544055 | Msa0164770:intron | 70.0% | |
CAGATACTTGGGGGGGGGGG+GGG | - | chr1_4:44544037-44544056 | Msa0164770:intron | 70.0% | |
AGATACTTGGGGGGGGGGGG+GGG | - | chr1_4:44544038-44544057 | Msa0164770:intron | 70.0% | |
CCCCCCCCCCCCCAAGTATC+TGG | + | chr1_4:44544039-44544058 | None:intergenic | 75.0% | |
GATACTTGGGGGGGGGGGGG+GGG | - | chr1_4:44544039-44544058 | Msa0164770:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 44542533 | 44554218 | 44542533 | ID=Msa0164770;Name=Msa0164770 |
chr1_4 | mRNA | 44542533 | 44554218 | 44542533 | ID=Msa0164770-mRNA-1;Parent=Msa0164770;Name=Msa0164770-mRNA-1;_AED=0.12;_eAED=0.12;_QI=69|0.92|0.88|1|0.96|0.92|27|423|1017 |
chr1_4 | exon | 44542533 | 44543213 | 44542533 | ID=Msa0164770-mRNA-1:exon:12821;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44543335 | 44543400 | 44543335 | ID=Msa0164770-mRNA-1:exon:12820;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44543616 | 44543741 | 44543616 | ID=Msa0164770-mRNA-1:exon:12819;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44544114 | 44544242 | 44544114 | ID=Msa0164770-mRNA-1:exon:12818;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44544795 | 44544942 | 44544795 | ID=Msa0164770-mRNA-1:exon:12817;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44545227 | 44545296 | 44545227 | ID=Msa0164770-mRNA-1:exon:12816;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44545410 | 44545494 | 44545410 | ID=Msa0164770-mRNA-1:exon:12815;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44545598 | 44545777 | 44545598 | ID=Msa0164770-mRNA-1:exon:12814;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44546656 | 44546749 | 44546656 | ID=Msa0164770-mRNA-1:exon:12813;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44548164 | 44548201 | 44548164 | ID=Msa0164770-mRNA-1:exon:12812;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44548296 | 44548472 | 44548296 | ID=Msa0164770-mRNA-1:exon:12811;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44548669 | 44548721 | 44548669 | ID=Msa0164770-mRNA-1:exon:12810;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44548804 | 44548903 | 44548804 | ID=Msa0164770-mRNA-1:exon:12809;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44548996 | 44549083 | 44548996 | ID=Msa0164770-mRNA-1:exon:12808;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44549169 | 44549292 | 44549169 | ID=Msa0164770-mRNA-1:exon:12807;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44549852 | 44549943 | 44549852 | ID=Msa0164770-mRNA-1:exon:12806;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44550127 | 44550263 | 44550127 | ID=Msa0164770-mRNA-1:exon:12805;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44550403 | 44550498 | 44550403 | ID=Msa0164770-mRNA-1:exon:12804;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44551327 | 44551420 | 44551327 | ID=Msa0164770-mRNA-1:exon:12803;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44551510 | 44551643 | 44551510 | ID=Msa0164770-mRNA-1:exon:12802;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44551748 | 44551858 | 44551748 | ID=Msa0164770-mRNA-1:exon:12801;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44552792 | 44552965 | 44552792 | ID=Msa0164770-mRNA-1:exon:12800;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44553124 | 44553246 | 44553124 | ID=Msa0164770-mRNA-1:exon:12799;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44553347 | 44553472 | 44553347 | ID=Msa0164770-mRNA-1:exon:12798;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44553596 | 44553721 | 44553596 | ID=Msa0164770-mRNA-1:exon:12797;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44553954 | 44554063 | 44553954 | ID=Msa0164770-mRNA-1:exon:12796;Parent=Msa0164770-mRNA-1 |
chr1_4 | exon | 44554155 | 44554218 | 44554155 | ID=Msa0164770-mRNA-1:exon:12795;Parent=Msa0164770-mRNA-1 |
chr1_4 | five_prime_UTR | 44554155 | 44554218 | 44554155 | ID=Msa0164770-mRNA-1:five_prime_utr;Parent=Msa0164770-mRNA-1 |
chr1_4 | five_prime_UTR | 44554059 | 44554063 | 44554059 | ID=Msa0164770-mRNA-1:five_prime_utr;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44553954 | 44554058 | 44553954 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44553596 | 44553721 | 44553596 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44553347 | 44553472 | 44553347 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44553124 | 44553246 | 44553124 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44552792 | 44552965 | 44552792 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44551748 | 44551858 | 44551748 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44551510 | 44551643 | 44551510 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44551327 | 44551420 | 44551327 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44550403 | 44550498 | 44550403 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44550127 | 44550263 | 44550127 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44549852 | 44549943 | 44549852 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44549169 | 44549292 | 44549169 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44548996 | 44549083 | 44548996 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44548804 | 44548903 | 44548804 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44548669 | 44548721 | 44548669 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44548296 | 44548472 | 44548296 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44548164 | 44548201 | 44548164 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44546656 | 44546749 | 44546656 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44545598 | 44545777 | 44545598 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44545410 | 44545494 | 44545410 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44545227 | 44545296 | 44545227 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44544795 | 44544942 | 44544795 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44544114 | 44544242 | 44544114 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44543616 | 44543741 | 44543616 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44543335 | 44543400 | 44543335 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | CDS | 44542956 | 44543213 | 44542956 | ID=Msa0164770-mRNA-1:cds;Parent=Msa0164770-mRNA-1 |
chr1_4 | three_prime_UTR | 44542533 | 44542955 | 44542533 | ID=Msa0164770-mRNA-1:three_prime_utr;Parent=Msa0164770-mRNA-1 |
Gene Sequence |
Protein sequence |