Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016640 | sp|A8MQL1|TRF1B_ARATH | 43.309 | 949 | 357 | 32 | 1 | 905 | 271 | 1082 | 4.27e-160 | 500 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016640 | G7I611 | 90.130 | 922 | 30 | 3 | 1 | 905 | 259 | 1136 | 0.0 | 1567 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016640 | Msa0110220 | 0.919111 | 6.765029e-87 | -8.615850e-47 |
| Msa0016640 | Msa0172740 | 0.824282 | 8.782494e-54 | -8.615850e-47 |
| Msa0016640 | Msa0174100 | 0.805545 | 1.267574e-49 | -8.615850e-47 |
| Msa0016640 | Msa0747230 | 0.808453 | 3.074660e-50 | -8.615850e-47 |
| Msa0016640 | Msa0803640 | 0.831794 | 1.363553e-55 | -8.615850e-47 |
| Msa0016640 | Msa0830400 | 0.813733 | 2.204708e-51 | -8.615850e-47 |
| Msa0016640 | Msa0898770 | 0.810895 | 9.180900e-51 | -8.615850e-47 |
| Msa0016640 | Msa0928110 | 0.817448 | 3.280507e-52 | -8.615850e-47 |
| Msa0016640 | Msa0998620 | 0.801638 | 8.192646e-49 | -8.615850e-47 |
| Msa0016640 | Msa1050970 | 0.808692 | 2.733124e-50 | -8.615850e-47 |
| Msa0016640 | Msa1074210 | 0.810599 | 1.063906e-50 | -8.615850e-47 |
| Msa0016640 | Msa1131880 | 0.812551 | 4.004491e-51 | -8.615850e-47 |
| Msa0016640 | Msa1133690 | 0.818388 | 2.012124e-52 | -8.615850e-47 |
| Msa0016640 | Msa1159160 | 0.815118 | 1.088948e-51 | -8.615850e-47 |
| Msa0016640 | Msa1440270 | 0.810589 | 1.069191e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016640 | MtrunA17_Chr1g0168221 | 90.130 | 922 | 30 | 3 | 1 | 905 | 259 | 1136 | 0.0 | 1567 |
| Msa0016640 | MtrunA17_Chr1g0186411 | 63.961 | 924 | 264 | 19 | 1 | 904 | 256 | 1130 | 0.0 | 1006 |
| Msa0016640 | MtrunA17_Chr1g0186421 | 83.168 | 101 | 16 | 1 | 1 | 101 | 245 | 344 | 1.00e-36 | 142 |
| Msa0016640 | MtrunA17_Chr8g0380871 | 33.333 | 144 | 66 | 3 | 1 | 144 | 1 | 114 | 6.19e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016640 | AT1G04300.6 | 43.414 | 949 | 356 | 32 | 1 | 905 | 9 | 820 | 4.65e-165 | 502 |
| Msa0016640 | AT1G04300.2 | 43.309 | 949 | 357 | 32 | 1 | 905 | 186 | 997 | 2.35e-162 | 501 |
| Msa0016640 | AT1G04300.5 | 43.309 | 949 | 357 | 32 | 1 | 905 | 233 | 1044 | 1.62e-161 | 500 |
| Msa0016640 | AT1G04300.4 | 43.414 | 949 | 356 | 32 | 1 | 905 | 244 | 1055 | 1.88e-161 | 500 |
| Msa0016640 | AT1G04300.1 | 43.309 | 949 | 357 | 32 | 1 | 905 | 263 | 1074 | 3.53e-161 | 500 |
| Msa0016640 | AT1G04300.3 | 43.309 | 949 | 357 | 32 | 1 | 905 | 271 | 1082 | 4.34e-161 | 500 |
| Msa0016640 | AT5G43560.2 | 40.618 | 938 | 378 | 31 | 1 | 905 | 264 | 1055 | 1.64e-128 | 413 |
| Msa0016640 | AT5G43560.1 | 40.618 | 938 | 378 | 31 | 1 | 905 | 264 | 1055 | 1.64e-128 | 413 |
| Msa0016640 | AT5G52330.2 | 47.980 | 198 | 56 | 3 | 1 | 191 | 162 | 319 | 2.22e-35 | 138 |
| Msa0016640 | AT5G52330.4 | 47.980 | 198 | 56 | 3 | 1 | 191 | 213 | 370 | 4.62e-35 | 139 |
| Msa0016640 | AT5G52330.3 | 47.980 | 198 | 56 | 3 | 1 | 191 | 213 | 370 | 4.62e-35 | 139 |
| Msa0016640 | AT5G52330.1 | 47.980 | 198 | 56 | 3 | 1 | 191 | 213 | 370 | 4.62e-35 | 139 |
Find 252 sgRNAs with CRISPR-Local
Find 605 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTGGAGGTGAGGTCTTC+TGG | 0.148518 | 1_1:+27625725 | None:intergenic |
| TTTGCAGCTTCTGTAAATTT+TGG | 0.167955 | 1_1:-27632304 | None:intergenic |
| TCCAGTGCTCCTTTGGTTCC+TGG | 0.190506 | 1_1:-27625658 | Msa0016640:CDS |
| TGAGGACCTTTCTCATCTTT+TGG | 0.220099 | 1_1:+27631984 | None:intergenic |
| GAGATGCAAGTCCTGTTAAT+TGG | 0.231963 | 1_1:-27628190 | Msa0016640:CDS |
| CTTGGATACAAATGATGATT+TGG | 0.238440 | 1_1:-27624939 | Msa0016640:CDS |
| CTCTGAAAGAATGGGTTCTA+TGG | 0.248049 | 1_1:-27625368 | Msa0016640:CDS |
| CGATGGTTCTTATGTGAAAA+AGG | 0.249073 | 1_1:-27628333 | Msa0016640:CDS |
| CATCATGTAATGGGAGTAAT+TGG | 0.269176 | 1_1:-27627843 | Msa0016640:CDS |
| TTGTCCTTGCCCACGTATTC+AGG | 0.270819 | 1_1:-27631205 | Msa0016640:CDS |
| CTTGGAACTCATTTGGCATT+TGG | 0.282059 | 1_1:+27625143 | None:intergenic |
| GCATCTCTTTCTTCTGAATC+AGG | 0.290280 | 1_1:+27628206 | None:intergenic |
| ATCATTTGTATCCAAGTTTC+CGG | 0.296324 | 1_1:+27624946 | None:intergenic |
| CCATGATCTTCAAGGATTAT+AGG | 0.306252 | 1_1:-27624454 | Msa0016640:three_prime_UTR |
| AAGGCCTTCCAGTGCTCCTT+TGG | 0.307538 | 1_1:-27625665 | Msa0016640:CDS |
| GGTTCTGATCTATCTTATCT+AGG | 0.320290 | 1_1:-27624734 | Msa0016640:CDS |
| TGAGGGTGCAATCTGCTTAC+AGG | 0.331535 | 1_1:-27627728 | Msa0016640:CDS |
| TATGGAAATGGAAAAGTAGA+TGG | 0.334283 | 1_1:-27624785 | Msa0016640:CDS |
| AGCCTTCAATCCACTATATA+AGG | 0.335613 | 1_1:+27632160 | None:intergenic |
| GGCCAGTCTAGTGTTCCTTT+TGG | 0.336659 | 1_1:-27625343 | Msa0016640:CDS |
| ACCAGTAGATAGTAGATCTT+TGG | 0.341145 | 1_1:-27625167 | Msa0016640:CDS |
| CATGATCTTCAAGGATTATA+GGG | 0.344615 | 1_1:-27624453 | Msa0016640:three_prime_UTR |
| CCACAAGCAAGTACACTATA+TGG | 0.361789 | 1_1:-27624803 | Msa0016640:CDS |
| ATCATAGTCACTTGTGCAAT+AGG | 0.363237 | 1_1:+27625691 | None:intergenic |
| TCTTCAGAGCAACGGCTTCC+TGG | 0.368059 | 1_1:+27629190 | None:intergenic |
| TGAAAGGCGTCTCACAGAAT+TGG | 0.369188 | 1_1:-27631249 | Msa0016640:CDS |
| GCACGCTCAGCGAGTGCAAC+TGG | 0.373842 | 1_1:-27625583 | Msa0016640:CDS |
| GATTTGTCTGATTCTGTGAT+AGG | 0.377094 | 1_1:-27628248 | Msa0016640:CDS |
| GTAATGGACTCCTTATATAG+TGG | 0.377460 | 1_1:-27632170 | Msa0016640:CDS |
| TTGGATACAAATGATGATTT+GGG | 0.381537 | 1_1:-27624938 | Msa0016640:CDS |
| CCAGCCATCTGCCATTGGTT+TGG | 0.384498 | 1_1:+27624755 | None:intergenic |
| CTTTGGTTCCTGGTGGTCCC+AGG | 0.385498 | 1_1:-27625648 | Msa0016640:CDS |
| CATTCATTAGGTAGATAGTT+AGG | 0.391239 | 1_1:+27629237 | None:intergenic |
| GATCCTCAACCAGTTCTTGT+AGG | 0.391279 | 1_1:-27624916 | Msa0016640:CDS |
| GTGCAGGCTTGGAACTCATT+TGG | 0.395159 | 1_1:+27625136 | None:intergenic |
| GCCATGCTGCCTCTTCTTCA+CGG | 0.400321 | 1_1:+27629151 | None:intergenic |
| GTCCCATAGCTCTGAAAGAA+TGG | 0.402060 | 1_1:-27625377 | Msa0016640:CDS |
| TGAGAAGGAGTTCCCCTTGT+AGG | 0.405175 | 1_1:+27627998 | None:intergenic |
| AAGTAAAAGCATCATGTAAT+GGG | 0.406830 | 1_1:-27627852 | Msa0016640:CDS |
| TTTACATGCCATGATCTTCA+AGG | 0.407247 | 1_1:-27624462 | Msa0016640:three_prime_UTR |
| GCTGTTGATATTAACGAGTC+TGG | 0.409121 | 1_1:-27627778 | Msa0016640:CDS |
| AACCCATTCTTTCAGAGCTA+TGG | 0.409480 | 1_1:+27625374 | None:intergenic |
| CTCGGCGAGGATGGCCCTAC+TGG | 0.409595 | 1_1:+27625883 | None:intergenic |
| TCTTTCTCAGCACGGACAAT+TGG | 0.413635 | 1_1:+27632071 | None:intergenic |
| CGAATGTAATAATGTGTTTG+AGG | 0.415152 | 1_1:-27624592 | Msa0016640:three_prime_UTR |
| TCAGGAATAAATCCATCTTC+AGG | 0.415299 | 1_1:-27625439 | Msa0016640:CDS |
| GCGAGTGCAACTGGCCGATT+GGG | 0.416040 | 1_1:-27625574 | Msa0016640:CDS |
| CTTGATGATGAGCATGGTAT+TGG | 0.416703 | 1_1:-27625046 | Msa0016640:CDS |
| GTCTTCCAATCCTTCAATGA+TGG | 0.418670 | 1_1:-27625001 | Msa0016640:CDS |
| TGAAGAAGAGGCAGCATGGC+TGG | 0.418885 | 1_1:-27629148 | Msa0016640:CDS |
| GAGTAATTGGACAGCTGAAA+TGG | 0.420043 | 1_1:-27627830 | Msa0016640:CDS |
| AGCGAGTGCAACTGGCCGAT+TGG | 0.420565 | 1_1:-27625575 | Msa0016640:CDS |
| GCATCAGTATCCCAATTAAC+AGG | 0.421659 | 1_1:+27628179 | None:intergenic |
| TTCATAGTGCATGCTTCTGC+TGG | 0.427378 | 1_1:+27625234 | None:intergenic |
| GAGAAGGAGTTCCCCTTGTA+GGG | 0.428800 | 1_1:+27627999 | None:intergenic |
| TCGAATTTGACTGGTGTCAA+TGG | 0.431251 | 1_1:-27624665 | Msa0016640:CDS |
| TTCCCTTTGAGAACTCCTGC+TGG | 0.431336 | 1_1:+27625258 | None:intergenic |
| AGATGCAAGTCCTGTTAATT+GGG | 0.431506 | 1_1:-27628189 | Msa0016640:CDS |
| GCAAGTACACTATATGGAAA+TGG | 0.432476 | 1_1:-27624797 | Msa0016640:CDS |
| ACTCATTCCACCTCTAGTTC+AGG | 0.434751 | 1_1:-27625457 | Msa0016640:CDS |
| CATCTAGGCGCCGCATGTCT+AGG | 0.435008 | 1_1:-27632265 | Msa0016640:exon |
| ACATGCGGCGCCTAGATGTT+TGG | 0.437181 | 1_1:+27632270 | None:intergenic |
| CGTCTTACGCCTGTGCCAAA+TGG | 0.440685 | 1_1:-27628110 | Msa0016640:CDS |
| GAAAGGCGTCTCACAGAATT+GGG | 0.444577 | 1_1:-27631248 | Msa0016640:CDS |
| AAAAGGTAGGGTAAAATTGT+TGG | 0.445502 | 1_1:-27632114 | Msa0016640:CDS |
| TGTGGACTCCCATTAGCAAC+AGG | 0.447740 | 1_1:+27625919 | None:intergenic |
| CTCCTTATATAGTGGATTGA+AGG | 0.447903 | 1_1:-27632162 | Msa0016640:CDS |
| CAAGTAAAAGCATCATGTAA+TGG | 0.450480 | 1_1:-27627853 | Msa0016640:CDS |
| GTGTAGGCTGTGAATGGATT+AGG | 0.453178 | 1_1:-27629267 | Msa0016640:intron |
| GAGAAATTGACCAAACATCT+AGG | 0.453955 | 1_1:-27632280 | Msa0016640:five_prime_UTR |
| TACTGATTCTTTGCCTTCAG+TGG | 0.454894 | 1_1:-27628033 | Msa0016640:CDS |
| TTGCGAAATCCAGACATTGA+TGG | 0.458103 | 1_1:-27624710 | Msa0016640:CDS |
| TCATTTGTATCCAAGTTTCC+GGG | 0.458434 | 1_1:+27624947 | None:intergenic |
| TCTCTCAAACCTACAAGAAC+TGG | 0.460616 | 1_1:+27624907 | None:intergenic |
| CAACAAGCCTGTTGTCAGAA+AGG | 0.461630 | 1_1:-27627689 | Msa0016640:intron |
| CTACTGGTTGGAACAAATCC+AGG | 0.461960 | 1_1:+27625182 | None:intergenic |
| AGAATTGGGTCGCAGGACTC+TGG | 0.465097 | 1_1:-27631234 | Msa0016640:CDS |
| GTGATCCATCATTGAAGGAT+TGG | 0.466114 | 1_1:+27624996 | None:intergenic |
| TTCAGTTGGTCTTGGAGGTG+AGG | 0.467522 | 1_1:+27625717 | None:intergenic |
| TTGCTAATAGCCTCAGTTGA+AGG | 0.468398 | 1_1:+27628143 | None:intergenic |
| TTCTTGTCTCTTCAGAGCAA+CGG | 0.469503 | 1_1:+27629182 | None:intergenic |
| TGAGTAGCAGGTGAGGGATC+AGG | 0.470381 | 1_1:+27625550 | None:intergenic |
| GAGGGACTCCTCGGCGAGGA+TGG | 0.472364 | 1_1:+27625874 | None:intergenic |
| GACAGCTGAAATGGACAGTC+AGG | 0.472922 | 1_1:-27627821 | Msa0016640:CDS |
| AGTTCCAAGCCTGCACATCT+AGG | 0.473793 | 1_1:-27625129 | Msa0016640:CDS |
| AGTTCTAGTGGGAAAAGGCT+TGG | 0.473950 | 1_1:-27631168 | Msa0016640:CDS |
| GACGCCTAGATGTGCAGGCT+TGG | 0.475196 | 1_1:+27625125 | None:intergenic |
| GAAAGAAGTGACCTCTACTT+TGG | 0.476696 | 1_1:-27632192 | Msa0016640:CDS |
| CAAATGGAATGGCCGAGAAA+AGG | 0.479199 | 1_1:-27628094 | Msa0016640:CDS |
| TTCTATTTGATAGGAGGAGG+AGG | 0.480640 | 1_1:-27625995 | Msa0016640:intron |
| CAATTAGTTCTAGTGGGAAA+AGG | 0.483077 | 1_1:-27631173 | Msa0016640:CDS |
| CTCGCTGAGCGTGCAAGAGG+TGG | 0.483124 | 1_1:+27625592 | None:intergenic |
| CCTATAATCCTTGAAGATCA+TGG | 0.483547 | 1_1:+27624454 | None:intergenic |
| TCCCATAGCTCTGAAAGAAT+GGG | 0.483768 | 1_1:-27625376 | Msa0016640:CDS |
| GGATGAAAAGCTTGATGCAC+TGG | 0.484263 | 1_1:-27628282 | Msa0016640:CDS |
| GTGTATTATAAATAATGTAT+TGG | 0.484302 | 1_1:-27624409 | Msa0016640:three_prime_UTR |
| TGCAATGATGGGGAATCAAA+TGG | 0.487415 | 1_1:-27625500 | Msa0016640:CDS |
| AGAGGTGGAATGAGTGAAAC+TGG | 0.487893 | 1_1:+27625465 | None:intergenic |
| AAAGAAGGCAAAGAAGAAAC+AGG | 0.488536 | 1_1:-27629082 | Msa0016640:intron |
| CTGAACTTTGTAATTTGAGA+AGG | 0.489209 | 1_1:+27627983 | None:intergenic |
| TATGAGTAACCATCAATGTC+TGG | 0.489341 | 1_1:+27624701 | None:intergenic |
| GAAATGGACAGTCAGGCATC+TGG | 0.490476 | 1_1:-27627814 | Msa0016640:CDS |
| TTATACCCTTGTTGAAATCC+AGG | 0.494617 | 1_1:+27624866 | None:intergenic |
| ACCCATTCTTTCAGAGCTAT+GGG | 0.495905 | 1_1:+27625375 | None:intergenic |
| CATATGTGATCCATCATTGA+AGG | 0.497479 | 1_1:+27624991 | None:intergenic |
| AGTGACCTCTACTTTGGTAA+TGG | 0.498589 | 1_1:-27632186 | Msa0016640:CDS |
| TAAAGGAAAGGATAAAAGTA+AGG | 0.499037 | 1_1:-27628396 | Msa0016640:CDS |
| GCAGATCATTTATGATATCA+AGG | 0.499393 | 1_1:+27625068 | None:intergenic |
| GTCGTACAGAAATGCAATGA+TGG | 0.499513 | 1_1:-27625512 | Msa0016640:CDS |
| TCACGAAGTTACCATGATCC+TGG | 0.499520 | 1_1:-27624884 | Msa0016640:CDS |
| TCCAAAGATCTACTATCTAC+TGG | 0.499727 | 1_1:+27625166 | None:intergenic |
| TGAATGCAGCAATAAAATTG+AGG | 0.501620 | 1_1:-27629220 | Msa0016640:CDS |
| ACCAGGAACCAAAGGAGCAC+TGG | 0.501971 | 1_1:+27625657 | None:intergenic |
| TCGGCCATTCCATTTGGCAC+AGG | 0.504348 | 1_1:+27628101 | None:intergenic |
| CAAGATTACTCGAATTTGAC+TGG | 0.504507 | 1_1:-27624674 | Msa0016640:CDS |
| ATCTAGGCGCCGCATGTCTA+GGG | 0.505216 | 1_1:-27632264 | Msa0016640:exon |
| GAAACAAAATATTAAAGAGC+AGG | 0.505834 | 1_1:-27625956 | Msa0016640:CDS |
| CAGAACCAGCCATCTGCCAT+TGG | 0.507716 | 1_1:+27624750 | None:intergenic |
| TACCCTCACCTGTTAATGTC+AGG | 0.509713 | 1_1:-27625843 | Msa0016640:CDS |
| TTCCTGACATTAACAGGTGA+GGG | 0.509874 | 1_1:+27625841 | None:intergenic |
| GTTCTGACGCCTAGATGTGC+AGG | 0.511355 | 1_1:+27625120 | None:intergenic |
| CATGGATGAGGTTCAAACTC+TGG | 0.517317 | 1_1:-27628303 | Msa0016640:CDS |
| AAGTTCAGAAATCGCCTAGC+AGG | 0.518788 | 1_1:-27627968 | Msa0016640:intron |
| CCATATAGTGTACTTGCTTG+TGG | 0.520417 | 1_1:+27624803 | None:intergenic |
| TTGATGATGAGCATGGTATT+GGG | 0.520792 | 1_1:-27625045 | Msa0016640:CDS |
| CCAAACCAATGGCAGATGGC+TGG | 0.521008 | 1_1:-27624755 | Msa0016640:CDS |
| GCGTCAGAACCAAGGGTTGT+TGG | 0.523934 | 1_1:-27625107 | Msa0016640:CDS |
| GTTCTCAAAGGGAAGCCAGC+AGG | 0.525760 | 1_1:-27625273 | Msa0016640:CDS |
| ACTCATCCGCCAACAACCCT+TGG | 0.526307 | 1_1:+27625098 | None:intergenic |
| AGGATAAAAGTAAGGATGAA+AGG | 0.526481 | 1_1:-27628388 | Msa0016640:CDS |
| GTCTCACAGAATTGGGTCGC+AGG | 0.527397 | 1_1:-27631241 | Msa0016640:CDS |
| ACATCATTGAGTCGGGATGA+TGG | 0.530598 | 1_1:+27625211 | None:intergenic |
| CGTATACAATTAGTTCTAGT+GGG | 0.531149 | 1_1:-27631179 | Msa0016640:CDS |
| TTGGAAGACTGAACTTGTCC+CGG | 0.531151 | 1_1:+27625015 | None:intergenic |
| AATGTGTTTGAGGAAATTGT+TGG | 0.531262 | 1_1:-27624582 | Msa0016640:three_prime_UTR |
| TAAAATTGAGGTTTCTTACC+AGG | 0.532143 | 1_1:-27629208 | Msa0016640:CDS |
| CATGGTATTGGGAACACAGC+CGG | 0.532662 | 1_1:-27625034 | Msa0016640:CDS |
| TGTTCTATTGTTACTTGAGA+GGG | 0.533336 | 1_1:-27632027 | Msa0016640:CDS |
| TCGTACAGAAATGCAATGAT+GGG | 0.534764 | 1_1:-27625511 | Msa0016640:CDS |
| TGCTGTGAATAGCCTGAAGA+TGG | 0.534914 | 1_1:+27625427 | None:intergenic |
| GAAAGATATGTTTGTACTGG+TGG | 0.537606 | 1_1:-27632054 | Msa0016640:CDS |
| CATGATCCTGGATTTCAACA+AGG | 0.538595 | 1_1:-27624872 | Msa0016640:CDS |
| AGAGCTCATCCGTGAAGAAG+AGG | 0.539668 | 1_1:-27629160 | Msa0016640:CDS |
| TCTGAAAGAATGGGTTCTAT+GGG | 0.542073 | 1_1:-27625367 | Msa0016640:CDS |
| AGTTAATGAGAGGGAAAAGA+AGG | 0.542220 | 1_1:-27629097 | Msa0016640:CDS |
| AGAGACAGAAGTAGTTGGCC+TGG | 0.542742 | 1_1:+27625630 | None:intergenic |
| ATGGTATTGGGAACACAGCC+GGG | 0.542760 | 1_1:-27625033 | Msa0016640:CDS |
| GGAACATTACTATGAGTAGC+AGG | 0.543534 | 1_1:+27625538 | None:intergenic |
| TCACGAGTAATCATACCAAA+AGG | 0.543922 | 1_1:+27625328 | None:intergenic |
| CTTGTTGAAATCCAGGATCA+TGG | 0.544291 | 1_1:+27624873 | None:intergenic |
| TACCAAAAGGAACACTAGAC+TGG | 0.544415 | 1_1:+27625341 | None:intergenic |
| TCGTATACAATTAGTTCTAG+TGG | 0.545105 | 1_1:-27631180 | Msa0016640:CDS |
| CAAAACGTGGAGTTAATGAG+AGG | 0.546738 | 1_1:-27629107 | Msa0016640:CDS |
| AGTGGATTGAAGGCTCTTGA+AGG | 0.548152 | 1_1:-27632152 | Msa0016640:CDS |
| TAGACTGTGTAGGCTGTGAA+TGG | 0.548812 | 1_1:-27629273 | Msa0016640:intron |
| GTGAGGGATCAGGACCCAAT+CGG | 0.549209 | 1_1:+27625560 | None:intergenic |
| AGCCAGCAGGAGTTCTCAAA+GGG | 0.549385 | 1_1:-27625260 | Msa0016640:CDS |
| GATATTAACGAGTCTGGAAG+TGG | 0.549971 | 1_1:-27627772 | Msa0016640:CDS |
| ATGGAAATGGAAAAGTAGAT+GGG | 0.550546 | 1_1:-27624784 | Msa0016640:CDS |
| TTTAGTGTCTCACAACAGAC+AGG | 0.551279 | 1_1:-27625811 | Msa0016640:CDS |
| CTCCCTCCAAAAGATGAGAA+AGG | 0.553215 | 1_1:-27631990 | Msa0016640:CDS |
| TTTGGCAGGATGGAAACTCT+GGG | 0.553871 | 1_1:-27631304 | Msa0016640:intron |
| ATGTGTTTGAGGAAATTGTT+GGG | 0.554837 | 1_1:-27624581 | Msa0016640:three_prime_UTR |
| TGGTCAGTAGAGGGAAATGA+TGG | 0.556605 | 1_1:-27624618 | Msa0016640:exon |
| ACTGGTGTCATCTCTTTCTG+TGG | 0.559899 | 1_1:+27625901 | None:intergenic |
| TGAGAAAGATATGTTTGTAC+TGG | 0.559950 | 1_1:-27632057 | Msa0016640:CDS |
| ATGTTCTATTGTTACTTGAG+AGG | 0.560533 | 1_1:-27632028 | Msa0016640:CDS |
| GCAAAATGGGCTGCAGTGGA+TGG | 0.561269 | 1_1:-27625299 | Msa0016640:CDS |
| AAGCCAGCAGGAGTTCTCAA+AGG | 0.561389 | 1_1:-27625261 | Msa0016640:CDS |
| GTAGTTGGCCTGGGACCACC+AGG | 0.563177 | 1_1:+27625640 | None:intergenic |
| GTGGATGGAGAGTTCTCAAA+GGG | 0.563710 | 1_1:-27625284 | Msa0016640:CDS |
| GGGTCATTCATCACCACTGA+AGG | 0.564494 | 1_1:+27628020 | None:intergenic |
| GGTGATGAATGACCCCTACA+AGG | 0.565531 | 1_1:-27628012 | Msa0016640:CDS |
| TACGCCTGTGCCAAATGGAA+TGG | 0.566683 | 1_1:-27628105 | Msa0016640:CDS |
| TAACGAGTCTGGAAGTGGTA+AGG | 0.567324 | 1_1:-27627767 | Msa0016640:CDS |
| GAGTCAAAATATCCTCTAGA+GGG | 0.567686 | 1_1:+27624842 | None:intergenic |
| CTGGGACCACCAGGAACCAA+AGG | 0.568625 | 1_1:+27625649 | None:intergenic |
| GGTAGGTGAATCTGAGTCTG+AGG | 0.569421 | 1_1:-27627746 | Msa0016640:CDS |
| AAGATCTACTATCTACTGGT+TGG | 0.570964 | 1_1:+27625170 | None:intergenic |
| TCAGCACGGACAATTGGAGC+TGG | 0.573047 | 1_1:+27632077 | None:intergenic |
| CATCTAGGCGTCAGAACCAA+GGG | 0.575540 | 1_1:-27625114 | Msa0016640:CDS |
| AATGCATAAACTTACCTGCT+AGG | 0.575655 | 1_1:+27627954 | None:intergenic |
| CAGAAAGAGATGACACCAGT+AGG | 0.576060 | 1_1:-27625898 | Msa0016640:CDS |
| AAAGGATTCTAACATGGATG+AGG | 0.576784 | 1_1:-27628315 | Msa0016640:CDS |
| TGGATTTATTCCTGAACTAG+AGG | 0.577531 | 1_1:+27625447 | None:intergenic |
| ATTTATTCCTGAACTAGAGG+TGG | 0.578568 | 1_1:+27625450 | None:intergenic |
| AAATGGAAAAGTAGATGGGT+TGG | 0.578733 | 1_1:-27624780 | Msa0016640:CDS |
| GCACTCGCTGAGCGTGCAAG+AGG | 0.580849 | 1_1:+27625589 | None:intergenic |
| TCAGAACCAAGGGTTGTTGG+CGG | 0.581599 | 1_1:-27625104 | Msa0016640:CDS |
| TCCCTCTACTGACCATTCGA+AGG | 0.582469 | 1_1:+27624626 | None:intergenic |
| ACTCAATGATGTTCAAAACC+TGG | 0.583841 | 1_1:-27625200 | Msa0016640:CDS |
| GTGCAATCTGCTTACAGGAT+CGG | 0.584596 | 1_1:-27627723 | Msa0016640:CDS |
| CACAAGTGACTATGATGTCA+AGG | 0.584636 | 1_1:-27625684 | Msa0016640:CDS |
| GACCTTCGAATGGTCAGTAG+AGG | 0.586600 | 1_1:-27624628 | Msa0016640:exon |
| ATTCTATAGAGCGTGATGAA+AGG | 0.587407 | 1_1:-27631265 | Msa0016640:CDS |
| TTTCCTGACATTAACAGGTG+AGG | 0.589032 | 1_1:+27625840 | None:intergenic |
| ATGGGTTGGTTCCAAACCAA+TGG | 0.589285 | 1_1:-27624766 | Msa0016640:CDS |
| GGTTCCAAACCAATGGCAGA+TGG | 0.591512 | 1_1:-27624759 | Msa0016640:CDS |
| AAGTTTCTAGAGGGACTCCT+CGG | 0.593508 | 1_1:+27625865 | None:intergenic |
| CGAGTCAAAATATCCTCTAG+AGG | 0.598644 | 1_1:+27624841 | None:intergenic |
| GAGACAGAAGTAGTTGGCCT+GGG | 0.599637 | 1_1:+27625631 | None:intergenic |
| GAGTCTGGAAGTGGTAAGGT+AGG | 0.599994 | 1_1:-27627763 | Msa0016640:CDS |
| TCAACTGAGGCTATTAGCAA+TGG | 0.601464 | 1_1:-27628140 | Msa0016640:CDS |
| TTGTCATGTACCTCCACAGT+AGG | 0.603492 | 1_1:+27628365 | None:intergenic |
| AGTGCTCCTTTGGTTCCTGG+TGG | 0.604699 | 1_1:-27625655 | Msa0016640:CDS |
| AAACCTACAAGAACTGGTTG+AGG | 0.605344 | 1_1:+27624913 | None:intergenic |
| GCTTACAGGATCGGTTGAAG+TGG | 0.607174 | 1_1:-27627714 | Msa0016640:CDS |
| TAATTGGGATACTGATGCAT+CGG | 0.608377 | 1_1:-27628174 | Msa0016640:CDS |
| ATTACTATGAGTAGCAGGTG+AGG | 0.608562 | 1_1:+27625543 | None:intergenic |
| GCCAACTACTTCTGTCTCTG+TGG | 0.609034 | 1_1:-27625626 | Msa0016640:CDS |
| ACATCTAGGCGTCAGAACCA+AGG | 0.610584 | 1_1:-27625115 | Msa0016640:CDS |
| AGAAGGAGTTCCCCTTGTAG+GGG | 0.612013 | 1_1:+27628000 | None:intergenic |
| CATTTATGATATCAAGGTGA+GGG | 0.613177 | 1_1:+27625074 | None:intergenic |
| ACGGAACAACCGTAAAGGAA+AGG | 0.613215 | 1_1:-27628408 | Msa0016640:CDS |
| AGAAAGAGATGACACCAGTA+GGG | 0.613561 | 1_1:-27625897 | Msa0016640:CDS |
| GTAGGTGAATCTGAGTCTGA+GGG | 0.621851 | 1_1:-27627745 | Msa0016640:CDS |
| CAAGGGTATAACCCCTCTAG+AGG | 0.622294 | 1_1:-27624854 | Msa0016640:CDS |
| TCCGTGAAGAAGAGGCAGCA+TGG | 0.625518 | 1_1:-27629152 | Msa0016640:CDS |
| TCATTAGGTAGATAGTTAGG+AGG | 0.628378 | 1_1:+27629240 | None:intergenic |
| ACCACAGAGACAGAAGTAGT+TGG | 0.631937 | 1_1:+27625625 | None:intergenic |
| ATGATCCTGGATTTCAACAA+GGG | 0.632965 | 1_1:-27624871 | Msa0016640:CDS |
| GGAGTCCATTACCAAAGTAG+AGG | 0.633137 | 1_1:+27632181 | None:intergenic |
| GAAAGAATGGGTTCTATGGG+TGG | 0.635931 | 1_1:-27625364 | Msa0016640:CDS |
| ACCTTCGAATGGTCAGTAGA+GGG | 0.637007 | 1_1:-27624627 | Msa0016640:exon |
| GTGATGAATGACCCCTACAA+GGG | 0.637870 | 1_1:-27628011 | Msa0016640:CDS |
| AGTGGATGGAGAGTTCTCAA+AGG | 0.637904 | 1_1:-27625285 | Msa0016640:CDS |
| ACAGTATTCAGACCTTCGAA+TGG | 0.640677 | 1_1:-27624638 | Msa0016640:CDS |
| TTACTATGAGTAGCAGGTGA+GGG | 0.641182 | 1_1:+27625544 | None:intergenic |
| AGGTGAGGGTAAGTTTCTAG+AGG | 0.643867 | 1_1:+27625855 | None:intergenic |
| GTATACGATACCTGAATACG+TGG | 0.646036 | 1_1:+27631195 | None:intergenic |
| GATACCTGAATACGTGGGCA+AGG | 0.646290 | 1_1:+27631201 | None:intergenic |
| GGAAGCTCATCCTTCAACTG+AGG | 0.649377 | 1_1:-27628153 | Msa0016640:CDS |
| GGAACCAAAGGAGCACTGGA+AGG | 0.650227 | 1_1:+27625661 | None:intergenic |
| TCATTTATGATATCAAGGTG+AGG | 0.650652 | 1_1:+27625073 | None:intergenic |
| CATGACAAGCAGCAAGACGA+TGG | 0.651098 | 1_1:-27628350 | Msa0016640:CDS |
| AAAACGTGGAGTTAATGAGA+GGG | 0.653898 | 1_1:-27629106 | Msa0016640:CDS |
| GGATGAAAGGCCTACTGTGG+AGG | 0.656441 | 1_1:-27628375 | Msa0016640:CDS |
| TAAGGATGAAAGGCCTACTG+TGG | 0.657022 | 1_1:-27628378 | Msa0016640:CDS |
| GGTGAGGGTAAGTTTCTAGA+GGG | 0.659809 | 1_1:+27625856 | None:intergenic |
| CAAACATATCTTTCTCAGCA+CGG | 0.662053 | 1_1:+27632063 | None:intergenic |
| ATTGCATTTCTGTACGACTG+AGG | 0.662784 | 1_1:+27625517 | None:intergenic |
| CAGTAGGGCCATCCTCGCCG+AGG | 0.670375 | 1_1:-27625882 | Msa0016640:CDS |
| ACAGACAGGTAAAGATACAT+CGG | 0.674841 | 1_1:-27625797 | Msa0016640:CDS |
| AGTCAAAATATCCTCTAGAG+GGG | 0.676659 | 1_1:+27624843 | None:intergenic |
| TGATGAATGACCCCTACAAG+GGG | 0.679248 | 1_1:-27628010 | Msa0016640:CDS |
| CGTACAGAAATGCAATGATG+GGG | 0.682371 | 1_1:-27625510 | Msa0016640:CDS |
| TTGGCAGGATGGAAACTCTG+GGG | 0.683756 | 1_1:-27631303 | Msa0016640:intron |
| TCTAGAGGGACTCCTCGGCG+AGG | 0.692938 | 1_1:+27625870 | None:intergenic |
| AGGTCCTCAAAATCGCACAA+AGG | 0.694111 | 1_1:-27631970 | Msa0016640:intron |
| TATACGATACCTGAATACGT+GGG | 0.725145 | 1_1:+27631196 | None:intergenic |
| ACTGAACAGAAAGCAAAACG+TGG | 0.726082 | 1_1:-27629120 | Msa0016640:CDS |
| GATCTGCTTGATGATGAGCA+TGG | 0.743491 | 1_1:-27625052 | Msa0016640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAAATAACAGAAAT+GGG | + | chr1_1:27624869-27624888 | None:intergenic | 10.0% |
| !! | ATTTAAAAAAATAACAGAAA+TGG | + | chr1_1:27624870-27624889 | None:intergenic | 10.0% |
| !!! | AAAAAAAAGTATTTTAAGAT+TGG | + | chr1_1:27625018-27625037 | None:intergenic | 10.0% |
| !!! | CTTAAAATACTTTTTTTTTT+TGG | - | chr1_1:27625020-27625039 | Msa0016640:CDS | 10.0% |
| !! | ATACAAAATATTCTATTAAA+AGG | + | chr1_1:27625763-27625782 | None:intergenic | 10.0% |
| !! | ACTAAAAAAGTTAAAACAAT+GGG | + | chr1_1:27625157-27625176 | None:intergenic | 15.0% |
| !! | GATATAAAATTTCAATCTAA+TGG | - | chr1_1:27626251-27626270 | Msa0016640:intron | 15.0% |
| !!! | TAACAAGTAGATTTTTTTTT+TGG | - | chr1_1:27626395-27626414 | Msa0016640:intron | 15.0% |
| !! | ATCTGTAAAATAAAAACATT+TGG | - | chr1_1:27627766-27627785 | Msa0016640:CDS | 15.0% |
| !!! | ATAACAATTGAAGTATTAAT+AGG | - | chr1_1:27629963-27629982 | Msa0016640:intron | 15.0% |
| !!! | TTAATATTTTGTTTCTTTTG+CGG | + | chr1_1:27630694-27630713 | None:intergenic | 15.0% |
| !! | GTGTATTATAAATAATGTAT+TGG | - | chr1_1:27632246-27632265 | Msa0016640:CDS | 15.0% |
| !! | CACTAAAAAAGTTAAAACAA+TGG | + | chr1_1:27625158-27625177 | None:intergenic | 20.0% |
| !! | CTCATTTATATATTATGTTG+AGG | - | chr1_1:27625960-27625979 | Msa0016640:CDS | 20.0% |
| !! | ATTTATATATTATGTTGAGG+AGG | - | chr1_1:27625963-27625982 | Msa0016640:CDS | 20.0% |
| !!! | TCTTATATCTTTTAATCCAA+TGG | + | chr1_1:27626077-27626096 | None:intergenic | 20.0% |
| !! | GGAAAAAATCTAATTCAATT+TGG | + | chr1_1:27626498-27626517 | None:intergenic | 20.0% |
| !! | AAGAAGAAAAAAATACTACA+TGG | + | chr1_1:27626519-27626538 | None:intergenic | 20.0% |
| !!! | TTTTGTCAAATATATGTTTG+AGG | - | chr1_1:27626669-27626688 | Msa0016640:intron | 20.0% |
| !! | TTGCATGTTTGTATTAAAAT+TGG | + | chr1_1:27626785-27626804 | None:intergenic | 20.0% |
| !!! | TAACTTTATTTTGGTATGTA+AGG | - | chr1_1:27627306-27627325 | Msa0016640:intron | 20.0% |
| !!! | ACTTATGTGAAAACAATTTT+AGG | + | chr1_1:27627637-27627656 | None:intergenic | 20.0% |
| !! | TAAAAACCCAATTTATTATC+AGG | + | chr1_1:27627678-27627697 | None:intergenic | 20.0% |
| !! | AGTTATAGTTTCTAAATTGA+TGG | + | chr1_1:27628072-27628091 | None:intergenic | 20.0% |
| !!! | TAGAAAAGTTGGTAAAAAAT+AGG | - | chr1_1:27629577-27629596 | Msa0016640:intron | 20.0% |
| !! | AAACAAAATTTGGTAAAACA+AGG | + | chr1_1:27629883-27629902 | None:intergenic | 20.0% |
| !! | TGCATATGAAAAACAAAATT+TGG | + | chr1_1:27629893-27629912 | None:intergenic | 20.0% |
| !!! | AAAATATTTTCACTTAGTTG+GGG | + | chr1_1:27630023-27630042 | None:intergenic | 20.0% |
| !!! | GAAAATATTTTCACTTAGTT+GGG | + | chr1_1:27630024-27630043 | None:intergenic | 20.0% |
| !!! | TGAAAATATTTTCACTTAGT+TGG | + | chr1_1:27630025-27630044 | None:intergenic | 20.0% |
| !! | GTATATGTATTATAGAATGT+GGG | + | chr1_1:27630321-27630340 | None:intergenic | 20.0% |
| !! | TGTATATGTATTATAGAATG+TGG | + | chr1_1:27630322-27630341 | None:intergenic | 20.0% |
| !!! | ACAAAATGTTTTCTTATCAA+GGG | + | chr1_1:27632130-27632149 | None:intergenic | 20.0% |
| !!! | TACAAAATGTTTTCTTATCA+AGG | + | chr1_1:27632131-27632150 | None:intergenic | 20.0% |
| !! | TTGGAAATTATGTTGATAGA+TGG | - | chr1_1:27624736-27624755 | Msa0016640:CDS | 25.0% |
| ! | AGACACATGGTAAAAATTAA+TGG | - | chr1_1:27624785-27624804 | Msa0016640:CDS | 25.0% |
| ! | GACACATGGTAAAAATTAAT+GGG | - | chr1_1:27624786-27624805 | Msa0016640:CDS | 25.0% |
| ! | TCATTAATCAACAACAGAAA+GGG | + | chr1_1:27624906-27624925 | None:intergenic | 25.0% |
| ! | ATCATTAATCAACAACAGAA+AGG | + | chr1_1:27624907-27624926 | None:intergenic | 25.0% |
| ! | AGAAAAATGGTTCTTTCATT+TGG | + | chr1_1:27625830-27625849 | None:intergenic | 25.0% |
| ! | GGACAAAATAAGAAGAAAAA+TGG | + | chr1_1:27625843-27625862 | None:intergenic | 25.0% |
| ! | AACGAAAAAAATGTCTACTT+TGG | + | chr1_1:27625915-27625934 | None:intergenic | 25.0% |
| ! | TAACTTATATAACTCACCAT+TGG | - | chr1_1:27626058-27626077 | Msa0016640:intron | 25.0% |
| !! | TTAACAGTTTTCAGTAAAAG+TGG | - | chr1_1:27626149-27626168 | Msa0016640:intron | 25.0% |
| !! | TACTTGTTAATTTCTTGTAC+AGG | + | chr1_1:27626384-27626403 | None:intergenic | 25.0% |
| !!! | CAAGTAGATTTTTTTTTTGG+TGG | - | chr1_1:27626398-27626417 | Msa0016640:intron | 25.0% |
| ! | ACTAATGCATAATATATGCA+AGG | + | chr1_1:27626446-27626465 | None:intergenic | 25.0% |
| !!! | AATTGAGTTTGCTATTAAGT+GGG | + | chr1_1:27626713-27626732 | None:intergenic | 25.0% |
| !!! | AAATTGAGTTTGCTATTAAG+TGG | + | chr1_1:27626714-27626733 | None:intergenic | 25.0% |
| !! | TCATTTTGCAAACATTCTTT+TGG | + | chr1_1:27626740-27626759 | None:intergenic | 25.0% |
| !! | TATGATGTCAACTTCTTTTT+CGG | - | chr1_1:27626827-27626846 | Msa0016640:intron | 25.0% |
| !! | ATCACAGTTTGAAATTTGAA+TGG | + | chr1_1:27626861-27626880 | None:intergenic | 25.0% |
| ! | TATTATACTGATACTGAGTT+TGG | - | chr1_1:27627026-27627045 | Msa0016640:intron | 25.0% |
| !! | ATTTTATTGCTGCATTCATT+AGG | + | chr1_1:27627433-27627452 | None:intergenic | 25.0% |
| !!! | TGGCATATTAGTTTTTAATG+AGG | - | chr1_1:27627895-27627914 | Msa0016640:intron | 25.0% |
| ! | CAAGGTTGTAAAATAAGTAA+AGG | + | chr1_1:27627972-27627991 | None:intergenic | 25.0% |
| ! | TTAAAGGATGTCATAATACA+CGG | - | chr1_1:27628147-27628166 | Msa0016640:CDS | 25.0% |
| !! | TACTTTTATCCTTTCCTTTA+CGG | + | chr1_1:27628259-27628278 | None:intergenic | 25.0% |
| ! | TAAAGGAAAGGATAAAAGTA+AGG | - | chr1_1:27628259-27628278 | Msa0016640:CDS | 25.0% |
| !! | TTTATGCATTGTTTCTTTCA+TGG | - | chr1_1:27628714-27628733 | Msa0016640:intron | 25.0% |
| !! | TTATGCATTGTTTCTTTCAT+GGG | - | chr1_1:27628715-27628734 | Msa0016640:intron | 25.0% |
| !!! | AAGTAAAAGCATCATGTAAT+GGG | - | chr1_1:27628803-27628822 | Msa0016640:intron | 25.0% |
| ! | AATTCATGACAAAAGAAACT+GGG | + | chr1_1:27629075-27629094 | None:intergenic | 25.0% |
| ! | TAATTCATGACAAAAGAAAC+TGG | + | chr1_1:27629076-27629095 | None:intergenic | 25.0% |
| ! | TAACCCAAATCTTGTAATAA+CGG | + | chr1_1:27629224-27629243 | None:intergenic | 25.0% |
| !! | TTTACCAACTTTTCTACTAT+AGG | + | chr1_1:27629573-27629592 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr1_1:27629702-27629721 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAGAATTTAG+AGG | - | chr1_1:27629719-27629738 | Msa0016640:intron | 25.0% |
| !!! | TTGGTTGTTGTTGTTTTATA+TGG | - | chr1_1:27629830-27629849 | Msa0016640:intron | 25.0% |
| ! | CTAATATCTAGATAGCTAAT+GGG | + | chr1_1:27630058-27630077 | None:intergenic | 25.0% |
| ! | TCTAATATCTAGATAGCTAA+TGG | + | chr1_1:27630059-27630078 | None:intergenic | 25.0% |
| ! | GATTATTATAAACTAGTGAC+TGG | - | chr1_1:27630196-27630215 | Msa0016640:intron | 25.0% |
| ! | AGTATATCCAAAATTGAAAG+AGG | - | chr1_1:27630351-27630370 | Msa0016640:intron | 25.0% |
| ! | ATAAAGTAAGGAATGAAAAG+CGG | + | chr1_1:27630407-27630426 | None:intergenic | 25.0% |
| ! | AGCACATGTAAAATAAAGTA+AGG | + | chr1_1:27630419-27630438 | None:intergenic | 25.0% |
| ! | CATTGTGAACATGATTTAAT+TGG | - | chr1_1:27630629-27630648 | Msa0016640:intron | 25.0% |
| ! | GAAACAAAATATTAAAGAGC+AGG | - | chr1_1:27630699-27630718 | Msa0016640:intron | 25.0% |
| ! | TTGGATACAAATGATGATTT+GGG | - | chr1_1:27631717-27631736 | Msa0016640:intron | 25.0% |
| !! | CAAAATGTTTTCTTATCAAG+GGG | + | chr1_1:27632129-27632148 | None:intergenic | 25.0% |
| ! | TGTAAAAAATCATGAAAAGC+TGG | + | chr1_1:27632179-27632198 | None:intergenic | 25.0% |
| ! | GATCAAAAACAATCATAATC+AGG | - | chr1_1:27632277-27632296 | Msa0016640:five_prime_UTR | 25.0% |
| ! | CAATTTTACCCTACCTTTTT+TGG | + | chr1_1:27624540-27624559 | None:intergenic | 30.0% |
| AAAAGGTAGGGTAAAATTGT+TGG | - | chr1_1:27624541-27624560 | Msa0016640:three_prime_UTR | 30.0% | |
| TGAGAAAGATATGTTTGTAC+TGG | - | chr1_1:27624598-27624617 | Msa0016640:three_prime_UTR | 30.0% | |
| ! | ATGTTCTATTGTTACTTGAG+AGG | - | chr1_1:27624627-27624646 | Msa0016640:exon | 30.0% |
| ! | TGTTCTATTGTTACTTGAGA+GGG | - | chr1_1:27624628-27624647 | Msa0016640:exon | 30.0% |
| !! | GTTTGTGTTGGTTAAATGAT+TGG | - | chr1_1:27624717-27624736 | Msa0016640:CDS | 30.0% |
| CATTAATCAACAACAGAAAG+GGG | + | chr1_1:27624905-27624924 | None:intergenic | 30.0% | |
| AGCACTGTAAATATTAGTGA+GGG | - | chr1_1:27624958-27624977 | Msa0016640:CDS | 30.0% | |
| ACATCTTTAGACCTTATTCA+TGG | - | chr1_1:27624991-27625010 | Msa0016640:CDS | 30.0% | |
| CATCTTTAGACCTTATTCAT+GGG | - | chr1_1:27624992-27625011 | Msa0016640:CDS | 30.0% | |
| CCTTTACATAATTTCTTGCT+TGG | + | chr1_1:27625095-27625114 | None:intergenic | 30.0% | |
| CCAAGCAAGAAATTATGTAA+AGG | - | chr1_1:27625092-27625111 | Msa0016640:CDS | 30.0% | |
| AGCAAGAAATTATGTAAAGG+CGG | - | chr1_1:27625095-27625114 | Msa0016640:CDS | 30.0% | |
| GTTAGCATAATCTACAAACT+AGG | - | chr1_1:27625193-27625212 | Msa0016640:CDS | 30.0% | |
| AATGTGTTAATAGCCAAACT+AGG | + | chr1_1:27625219-27625238 | None:intergenic | 30.0% | |
| ! | TGTTGTCAATGGATATGTTT+TGG | - | chr1_1:27625276-27625295 | Msa0016640:CDS | 30.0% |
| !! | TCGTATACAATTAGTTCTAG+TGG | - | chr1_1:27625475-27625494 | Msa0016640:CDS | 30.0% |
| !! | CGTATACAATTAGTTCTAGT+GGG | - | chr1_1:27625476-27625495 | Msa0016640:CDS | 30.0% |
| ! | CAGTATTGTATTTTGTTGAG+AGG | - | chr1_1:27625569-27625588 | Msa0016640:CDS | 30.0% |
| AGTACTTGGAAAGTTAGTAT+GGG | - | chr1_1:27625645-27625664 | Msa0016640:CDS | 30.0% | |
| ! | CAAATTTCAAAGAGCATGTT+TGG | - | chr1_1:27625722-27625741 | Msa0016640:CDS | 30.0% |
| TCTATTAAAAGGAAGCAATG+CGG | + | chr1_1:27625752-27625771 | None:intergenic | 30.0% | |
| !!! | ACTTTGGTTTTTAACGAGAA+TGG | + | chr1_1:27625899-27625918 | None:intergenic | 30.0% |
| ! | ACCAGTCAACAAGTTTTTAT+TGG | - | chr1_1:27626030-27626049 | Msa0016640:intron | 30.0% |
| !! | TCCAATAAAAACTTGTTGAC+TGG | + | chr1_1:27626034-27626053 | None:intergenic | 30.0% |
| AAATTTCAAACTGTGATGCA+TGG | - | chr1_1:27626864-27626883 | Msa0016640:intron | 30.0% | |
| TGTTAGTAGTTAGCATTAAC+AGG | + | chr1_1:27626952-27626971 | None:intergenic | 30.0% | |
| ATGCTAACTACTAACAACAT+TGG | - | chr1_1:27626956-27626975 | Msa0016640:intron | 30.0% | |
| ! | ATATGAAATGATTTGTGGCT+AGG | - | chr1_1:27627082-27627101 | Msa0016640:intron | 30.0% |
| CTTTGTGTAGTTGTAATATG+AGG | - | chr1_1:27627249-27627268 | Msa0016640:intron | 30.0% | |
| !! | GGACATGCTTAACTTTATTT+TGG | - | chr1_1:27627297-27627316 | Msa0016640:intron | 30.0% |
| CATTCATTAGGTAGATAGTT+AGG | + | chr1_1:27627421-27627440 | None:intergenic | 30.0% | |
| TGAATGCAGCAATAAAATTG+AGG | - | chr1_1:27627435-27627454 | Msa0016640:intron | 30.0% | |
| TAAAATTGAGGTTTCTTACC+AGG | - | chr1_1:27627447-27627466 | Msa0016640:intron | 30.0% | |
| GCATCTAAATTCATCATCAA+GGG | - | chr1_1:27627600-27627619 | Msa0016640:intron | 30.0% | |
| TGGTTGTCCTGATAATAAAT+TGG | - | chr1_1:27627668-27627687 | Msa0016640:intron | 30.0% | |
| GGTTGTCCTGATAATAAATT+GGG | - | chr1_1:27627669-27627688 | Msa0016640:intron | 30.0% | |
| ! | GATAATTTGTGATCCATGTT+CGG | + | chr1_1:27627749-27627768 | None:intergenic | 30.0% |
| AAACTAATATGCCATAGCTT+GGG | + | chr1_1:27627889-27627908 | None:intergenic | 30.0% | |
| AAAACTAATATGCCATAGCT+TGG | + | chr1_1:27627890-27627909 | None:intergenic | 30.0% | |
| ! | TTGTAACCTAAGCTATTTCA+CGG | + | chr1_1:27628000-27628019 | None:intergenic | 30.0% |
| TTAGCCAGAAGAATACAAAT+TGG | + | chr1_1:27628024-27628043 | None:intergenic | 30.0% | |
| TAAAGGATGTCATAATACAC+GGG | - | chr1_1:27628148-27628167 | Msa0016640:CDS | 30.0% | |
| AGGATAAAAGTAAGGATGAA+AGG | - | chr1_1:27628267-27628286 | Msa0016640:CDS | 30.0% | |
| TGTGAAAAAGGATTCTAACA+TGG | - | chr1_1:27628334-27628353 | Msa0016640:CDS | 30.0% | |
| CTGAACTTTGTAATTTGAGA+AGG | + | chr1_1:27628675-27628694 | None:intergenic | 30.0% | |
| ! | TATGCATTGTTTCTTTCATG+GGG | - | chr1_1:27628716-27628735 | Msa0016640:intron | 30.0% |
| ! | CATTACATGATGCTTTTACT+TGG | + | chr1_1:27628804-27628823 | None:intergenic | 30.0% |
| !! | CAAGTAAAAGCATCATGTAA+TGG | - | chr1_1:27628802-27628821 | Msa0016640:intron | 30.0% |
| AAAAAAACCTTTCTGACAAC+AGG | + | chr1_1:27628976-27628995 | None:intergenic | 30.0% | |
| TCAAAAGCTTAAGCTATTGA+GGG | - | chr1_1:27629102-27629121 | Msa0016640:CDS | 30.0% | |
| TCAACCGTTATTACAAGATT+TGG | - | chr1_1:27629217-27629236 | Msa0016640:CDS | 30.0% | |
| CAACCGTTATTACAAGATTT+GGG | - | chr1_1:27629218-27629237 | Msa0016640:CDS | 30.0% | |
| ! | TTACAAGATTTGGGTTAGAA+AGG | - | chr1_1:27629227-27629246 | Msa0016640:CDS | 30.0% |
| TATAAAAATCATTGTGTCGC+CGG | + | chr1_1:27629318-27629337 | None:intergenic | 30.0% | |
| TGGTAAAAAATAGGCTTAGA+TGG | - | chr1_1:27629586-27629605 | Msa0016640:intron | 30.0% | |
| GACCTCTAAATTCTTTCTAA+TGG | + | chr1_1:27629724-27629743 | None:intergenic | 30.0% | |
| TAAACTTAGTGTTAGGACTT+AGG | - | chr1_1:27630169-27630188 | Msa0016640:intron | 30.0% | |
| ! | TATTTTACATGTGCTAGCAT+AGG | - | chr1_1:27630424-27630443 | Msa0016640:intron | 30.0% |
| ! | ATTTTACATGTGCTAGCATA+GGG | - | chr1_1:27630425-27630444 | Msa0016640:intron | 30.0% |
| ! | TGTACTTTCTTTTTCCTGAA+GGG | - | chr1_1:27630451-27630470 | Msa0016640:intron | 30.0% |
| AAAAGGAAAAGGTAAGTCAA+AGG | + | chr1_1:27630542-27630561 | None:intergenic | 30.0% | |
| GCAGCAAATTTAAAAGGAAA+AGG | + | chr1_1:27630553-27630572 | None:intergenic | 30.0% | |
| AACAACGCAGCAAATTTAAA+AGG | + | chr1_1:27630559-27630578 | None:intergenic | 30.0% | |
| GTTATGCTCTTCTATTTGAT+AGG | - | chr1_1:27630651-27630670 | Msa0016640:intron | 30.0% | |
| TTGAAAAACCTGTTGCTAAT+GGG | - | chr1_1:27630728-27630747 | Msa0016640:intron | 30.0% | |
| CATTTATGATATCAAGGTGA+GGG | + | chr1_1:27631584-27631603 | None:intergenic | 30.0% | |
| TCATTTATGATATCAAGGTG+AGG | + | chr1_1:27631585-27631604 | None:intergenic | 30.0% | |
| GCAGATCATTTATGATATCA+AGG | + | chr1_1:27631590-27631609 | None:intergenic | 30.0% | |
| ATCATTTGTATCCAAGTTTC+CGG | + | chr1_1:27631712-27631731 | None:intergenic | 30.0% | |
| CTTGGATACAAATGATGATT+TGG | - | chr1_1:27631716-27631735 | Msa0016640:intron | 30.0% | |
| TATGGAAATGGAAAAGTAGA+TGG | - | chr1_1:27631870-27631889 | Msa0016640:intron | 30.0% | |
| ATGGAAATGGAAAAGTAGAT+GGG | - | chr1_1:27631871-27631890 | Msa0016640:intron | 30.0% | |
| CGAATGTAATAATGTGTTTG+AGG | - | chr1_1:27632063-27632082 | Msa0016640:CDS | 30.0% | |
| AATGTGTTTGAGGAAATTGT+TGG | - | chr1_1:27632073-27632092 | Msa0016640:CDS | 30.0% | |
| ATGTGTTTGAGGAAATTGTT+GGG | - | chr1_1:27632074-27632093 | Msa0016640:CDS | 30.0% | |
| CATGATCTTCAAGGATTATA+GGG | - | chr1_1:27632202-27632221 | Msa0016640:CDS | 30.0% | |
| GAGAAATTGACCAAACATCT+AGG | - | chr1_1:27624375-27624394 | Msa0016640:three_prime_UTR | 35.0% | |
| !! | GTAATGGACTCCTTATATAG+TGG | - | chr1_1:27624485-27624504 | Msa0016640:three_prime_UTR | 35.0% |
| !! | CTCCTTATATAGTGGATTGA+AGG | - | chr1_1:27624493-27624512 | Msa0016640:three_prime_UTR | 35.0% |
| AGCCTTCAATCCACTATATA+AGG | + | chr1_1:27624498-27624517 | None:intergenic | 35.0% | |
| CAAACATATCTTTCTCAGCA+CGG | + | chr1_1:27624595-27624614 | None:intergenic | 35.0% | |
| GAAAGATATGTTTGTACTGG+TGG | - | chr1_1:27624601-27624620 | Msa0016640:three_prime_UTR | 35.0% | |
| ! | ATGTTGATAGATGGTGACAT+AGG | - | chr1_1:27624745-27624764 | Msa0016640:CDS | 35.0% |
| ! | TGTTGATAGATGGTGACATA+GGG | - | chr1_1:27624746-27624765 | Msa0016640:CDS | 35.0% |
| !! | GATAGCTTGCTAAAAGCTTA+AGG | - | chr1_1:27624924-27624943 | Msa0016640:CDS | 35.0% |
| TAAAAGCTTAAGGACAGCAA+GGG | - | chr1_1:27624934-27624953 | Msa0016640:CDS | 35.0% | |
| ! | GAGCACTGTAAATATTAGTG+AGG | - | chr1_1:27624957-27624976 | Msa0016640:CDS | 35.0% |
| GCACTGTAAATATTAGTGAG+GGG | - | chr1_1:27624959-27624978 | Msa0016640:CDS | 35.0% | |
| ! | TTAAGATTGGCCCATGAATA+AGG | + | chr1_1:27625005-27625024 | None:intergenic | 35.0% |
| TATCCCATATTCTGAACGAT+AGG | - | chr1_1:27625131-27625150 | Msa0016640:CDS | 35.0% | |
| AACACATTGCACATGTAGAA+TGG | - | chr1_1:27625231-27625250 | Msa0016640:CDS | 35.0% | |
| CACATGTAGAATGGTATTCT+TGG | - | chr1_1:27625240-27625259 | Msa0016640:CDS | 35.0% | |
| ATTCTATAGAGCGTGATGAA+AGG | - | chr1_1:27625390-27625409 | Msa0016640:CDS | 35.0% | |
| TATACGATACCTGAATACGT+GGG | + | chr1_1:27625462-27625481 | None:intergenic | 35.0% | |
| !! | CAATTAGTTCTAGTGGGAAA+AGG | - | chr1_1:27625482-27625501 | Msa0016640:CDS | 35.0% |
| ! | GAGAGGATTAAGTTTTCATG+CGG | - | chr1_1:27625586-27625605 | Msa0016640:CDS | 35.0% |
| ! | GTTTTCATGCGGTGATTTTT+AGG | - | chr1_1:27625597-27625616 | Msa0016640:CDS | 35.0% |
| GAGTACTTGGAAAGTTAGTA+TGG | - | chr1_1:27625644-27625663 | Msa0016640:CDS | 35.0% | |
| ! | CATGCGAACAAATTTTGTCT+AGG | - | chr1_1:27625689-27625708 | Msa0016640:CDS | 35.0% |
| TGTGAACATACTTTCACTAC+AGG | + | chr1_1:27625806-27625825 | None:intergenic | 35.0% | |
| TGTCCAATATATGCTACATC+CGG | - | chr1_1:27625858-27625877 | Msa0016640:CDS | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | + | chr1_1:27626441-27626460 | None:intergenic | 35.0% | |
| !! | GCTATTAAGTGGGTTATGTT+TGG | + | chr1_1:27626703-27626722 | None:intergenic | 35.0% |
| TGATACTGAGTTTGGATAGA+TGG | - | chr1_1:27627034-27627053 | Msa0016640:intron | 35.0% | |
| GGACGATATGAAATGATTTG+TGG | - | chr1_1:27627077-27627096 | Msa0016640:intron | 35.0% | |
| !! | ATGATTTGTGGCTAGGATTT+TGG | - | chr1_1:27627089-27627108 | Msa0016640:intron | 35.0% |
| GATACTACACTACATGCTTA+TGG | + | chr1_1:27627179-27627198 | None:intergenic | 35.0% | |
| GACTGTATGAGTGATAAAAC+AGG | - | chr1_1:27627276-27627295 | Msa0016640:intron | 35.0% | |
| TCATTAGGTAGATAGTTAGG+AGG | + | chr1_1:27627418-27627437 | None:intergenic | 35.0% | |
| AAAACGTGGAGTTAATGAGA+GGG | - | chr1_1:27627549-27627568 | Msa0016640:intron | 35.0% | |
| AGTTAATGAGAGGGAAAAGA+AGG | - | chr1_1:27627558-27627577 | Msa0016640:intron | 35.0% | |
| AAAGAAGGCAAAGAAGAAAC+AGG | - | chr1_1:27627573-27627592 | Msa0016640:intron | 35.0% | |
| GGCATCTAAATTCATCATCA+AGG | - | chr1_1:27627599-27627618 | Msa0016640:intron | 35.0% | |
| !! | CACATAAGTACTGCATTTTG+TGG | - | chr1_1:27627648-27627667 | Msa0016640:intron | 35.0% |
| TTTATTGAAACCCCAAGCTA+TGG | - | chr1_1:27627875-27627894 | Msa0016640:intron | 35.0% | |
| AACTAATATGCCATAGCTTG+GGG | + | chr1_1:27627888-27627907 | None:intergenic | 35.0% | |
| ! | TGTAACCTAAGCTATTTCAC+GGG | + | chr1_1:27627999-27628018 | None:intergenic | 35.0% |
| CAAGCCAATTTGTATTCTTC+TGG | - | chr1_1:27628017-27628036 | Msa0016640:CDS | 35.0% | |
| ! | AATTGATGGCAAGATACTTC+CGG | + | chr1_1:27628058-27628077 | None:intergenic | 35.0% |
| AAAGGATGTCATAATACACG+GGG | - | chr1_1:27628149-27628168 | Msa0016640:CDS | 35.0% | |
| CGATGGTTCTTATGTGAAAA+AGG | - | chr1_1:27628322-27628341 | Msa0016640:CDS | 35.0% | |
| AAAGGATTCTAACATGGATG+AGG | - | chr1_1:27628340-27628359 | Msa0016640:CDS | 35.0% | |
| GATTTGTCTGATTCTGTGAT+AGG | - | chr1_1:27628407-27628426 | Msa0016640:CDS | 35.0% | |
| AGATGCAAGTCCTGTTAATT+GGG | - | chr1_1:27628466-27628485 | Msa0016640:intron | 35.0% | |
| TAATTGGGATACTGATGCAT+CGG | - | chr1_1:27628481-27628500 | Msa0016640:intron | 35.0% | |
| AATGCATAAACTTACCTGCT+AGG | + | chr1_1:27628704-27628723 | None:intergenic | 35.0% | |
| TTCTTACCTCTACAGACAAA+AGG | + | chr1_1:27628781-27628800 | None:intergenic | 35.0% | |
| ! | CATCATGTAATGGGAGTAAT+TGG | - | chr1_1:27628812-27628831 | Msa0016640:intron | 35.0% |
| AATCATGAGCATGAGCTTTA+AGG | + | chr1_1:27629002-27629021 | None:intergenic | 35.0% | |
| CTCAAAAGCTTAAGCTATTG+AGG | - | chr1_1:27629101-27629120 | Msa0016640:CDS | 35.0% | |
| TACTGTCCAAACACTTACAA+GGG | + | chr1_1:27629184-27629203 | None:intergenic | 35.0% | |
| AGGTCTAAATTCTAACTGCT+TGG | - | chr1_1:27629247-27629266 | Msa0016640:CDS | 35.0% | |
| TTCTAACTGCTTGGTTATAG+TGG | - | chr1_1:27629256-27629275 | Msa0016640:CDS | 35.0% | |
| ! | AGCATAGTTGGTTCATGAAA+TGG | + | chr1_1:27629290-27629309 | None:intergenic | 35.0% |
| TCAGTGAGTAAACTACTCTT+AGG | + | chr1_1:27629372-27629391 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr1_1:27629566-27629585 | Msa0016640:intron | 35.0% | |
| GAATTTAGAGGTCAATGAGT+TGG | - | chr1_1:27629731-27629750 | Msa0016640:intron | 35.0% | |
| GTTCTGTCATAAACCACATT+CGG | + | chr1_1:27629759-27629778 | None:intergenic | 35.0% | |
| TGGTTTATGACAGAACACTA+TGG | - | chr1_1:27629763-27629782 | Msa0016640:intron | 35.0% | |
| TTTGGTAAAACAAGGTCTTC+AGG | + | chr1_1:27629875-27629894 | None:intergenic | 35.0% | |
| ! | GTTTTGCATTGCTGAAAGAT+TGG | - | chr1_1:27629935-27629954 | Msa0016640:intron | 35.0% |
| CACTAAGTTTAGCTGGTTAT+AGG | + | chr1_1:27630160-27630179 | None:intergenic | 35.0% | |
| AACCAGCTAAACTTAGTGTT+AGG | - | chr1_1:27630162-27630181 | Msa0016640:intron | 35.0% | |
| GGGAAAATGATAGAAAGAGA+AGG | + | chr1_1:27630301-27630320 | None:intergenic | 35.0% | |
| ! | CTGTACTTTCTTTTTCCTGA+AGG | - | chr1_1:27630450-27630469 | Msa0016640:intron | 35.0% |
| ! | ATTTGCTGCGTTGTTTCAAT+AGG | - | chr1_1:27630564-27630583 | Msa0016640:intron | 35.0% |
| ! | TTTGCTGCGTTGTTTCAATA+GGG | - | chr1_1:27630565-27630584 | Msa0016640:intron | 35.0% |
| ATGCTCTTCTATTTGATAGG+AGG | - | chr1_1:27630654-27630673 | Msa0016640:intron | 35.0% | |
| GTTGAAAAACCTGTTGCTAA+TGG | - | chr1_1:27630727-27630746 | Msa0016640:intron | 35.0% | |
| ! | GATGTTTTCCTGACATTAAC+AGG | + | chr1_1:27630823-27630842 | None:intergenic | 35.0% |
| ACAGACAGGTAAAGATACAT+CGG | - | chr1_1:27630858-27630877 | Msa0016640:intron | 35.0% | |
| !! | TCTGTTTTAGGCACAATTGT+TGG | + | chr1_1:27630907-27630926 | None:intergenic | 35.0% |
| ! | GTCTTCTGGATTTCTGTTTT+AGG | + | chr1_1:27630919-27630938 | None:intergenic | 35.0% |
| !! | ATAGGTTTTTCAGTTGGTCT+TGG | + | chr1_1:27630949-27630968 | None:intergenic | 35.0% |
| !! | TGTGCAATAGGTTTTTCAGT+TGG | + | chr1_1:27630955-27630974 | None:intergenic | 35.0% |
| ATCATAGTCACTTGTGCAAT+AGG | + | chr1_1:27630967-27630986 | None:intergenic | 35.0% | |
| TCGTACAGAAATGCAATGAT+GGG | - | chr1_1:27631144-27631163 | Msa0016640:intron | 35.0% | |
| ATTTATTCCTGAACTAGAGG+TGG | + | chr1_1:27631208-27631227 | None:intergenic | 35.0% | |
| TGGATTTATTCCTGAACTAG+AGG | + | chr1_1:27631211-27631230 | None:intergenic | 35.0% | |
| TCAGGAATAAATCCATCTTC+AGG | - | chr1_1:27631216-27631235 | Msa0016640:CDS | 35.0% | |
| ! | TCTGAAAGAATGGGTTCTAT+GGG | - | chr1_1:27631288-27631307 | Msa0016640:CDS | 35.0% |
| TCACGAGTAATCATACCAAA+AGG | + | chr1_1:27631330-27631349 | None:intergenic | 35.0% | |
| ! | ACTCGTGATGTTTTGCAAAA+TGG | - | chr1_1:27631342-27631361 | Msa0016640:intron | 35.0% |
| ! | CTCGTGATGTTTTGCAAAAT+GGG | - | chr1_1:27631343-27631362 | Msa0016640:intron | 35.0% |
| !! | GTTTTGAACATCATTGAGTC+GGG | + | chr1_1:27631454-27631473 | None:intergenic | 35.0% |
| !!! | GGTTTTGAACATCATTGAGT+CGG | + | chr1_1:27631455-27631474 | None:intergenic | 35.0% |
| ACTCAATGATGTTCAAAACC+TGG | - | chr1_1:27631455-27631474 | Msa0016640:intron | 35.0% | |
| AAGATCTACTATCTACTGGT+TGG | + | chr1_1:27631488-27631507 | None:intergenic | 35.0% | |
| ACCAGTAGATAGTAGATCTT+TGG | - | chr1_1:27631488-27631507 | Msa0016640:intron | 35.0% | |
| TCCAAAGATCTACTATCTAC+TGG | + | chr1_1:27631492-27631511 | None:intergenic | 35.0% | |
| !! | TTGATGATGAGCATGGTATT+GGG | - | chr1_1:27631610-27631629 | Msa0016640:intron | 35.0% |
| CATATGTGATCCATCATTGA+AGG | + | chr1_1:27631667-27631686 | None:intergenic | 35.0% | |
| TCATTTGTATCCAAGTTTCC+GGG | + | chr1_1:27631711-27631730 | None:intergenic | 35.0% | |
| ATGATCCTGGATTTCAACAA+GGG | - | chr1_1:27631784-27631803 | Msa0016640:intron | 35.0% | |
| TTATACCCTTGTTGAAATCC+AGG | + | chr1_1:27631792-27631811 | None:intergenic | 35.0% | |
| ! | AGTCAAAATATCCTCTAGAG+GGG | + | chr1_1:27631815-27631834 | None:intergenic | 35.0% |
| GAGTCAAAATATCCTCTAGA+GGG | + | chr1_1:27631816-27631835 | None:intergenic | 35.0% | |
| !!! | AGGATATTTTGACTCGATGA+GGG | - | chr1_1:27631821-27631840 | Msa0016640:intron | 35.0% |
| GCAAGTACACTATATGGAAA+TGG | - | chr1_1:27631858-27631877 | Msa0016640:intron | 35.0% | |
| AAATGGAAAAGTAGATGGGT+TGG | - | chr1_1:27631875-27631894 | Msa0016640:intron | 35.0% | |
| ! | GGTTCTGATCTATCTTATCT+AGG | - | chr1_1:27631921-27631940 | Msa0016640:intron | 35.0% |
| TATGAGTAACCATCAATGTC+TGG | + | chr1_1:27631957-27631976 | None:intergenic | 35.0% | |
| CAAGATTACTCGAATTTGAC+TGG | - | chr1_1:27631981-27632000 | Msa0016640:CDS | 35.0% | |
| !! | TTGTTGGGTCTGTTTTAGAT+TGG | - | chr1_1:27632089-27632108 | Msa0016640:CDS | 35.0% |
| TTTACATGCCATGATCTTCA+AGG | - | chr1_1:27632193-27632212 | Msa0016640:CDS | 35.0% | |
| CCTATAATCCTTGAAGATCA+TGG | + | chr1_1:27632204-27632223 | None:intergenic | 35.0% | |
| CCATGATCTTCAAGGATTAT+AGG | - | chr1_1:27632201-27632220 | Msa0016640:CDS | 35.0% | |
| !!! | CTGTTTTTTCCCTAGACATG+CGG | + | chr1_1:27624403-27624422 | None:intergenic | 40.0% |
| GAAAGAAGTGACCTCTACTT+TGG | - | chr1_1:27624463-27624482 | Msa0016640:three_prime_UTR | 40.0% | |
| AGTGACCTCTACTTTGGTAA+TGG | - | chr1_1:27624469-27624488 | Msa0016640:three_prime_UTR | 40.0% | |
| !!! | TACCTTTTTTGGACTTGGTC+TGG | + | chr1_1:27624529-27624548 | None:intergenic | 40.0% |
| AGACCAAGTCCAAAAAAGGT+AGG | - | chr1_1:27624528-27624547 | Msa0016640:three_prime_UTR | 40.0% | |
| GACCAAGTCCAAAAAAGGTA+GGG | - | chr1_1:27624529-27624548 | Msa0016640:three_prime_UTR | 40.0% | |
| !!! | TACCCTACCTTTTTTGGACT+TGG | + | chr1_1:27624534-27624553 | None:intergenic | 40.0% |
| ! | GACCTTTCTCATCTTTTGGA+GGG | + | chr1_1:27624670-27624689 | None:intergenic | 40.0% |
| ! | TGAGGACCTTTCTCATCTTT+TGG | + | chr1_1:27624674-27624693 | None:intergenic | 40.0% |
| ACTTGGGAAGAAAAGACACA+TGG | - | chr1_1:27624772-27624791 | Msa0016640:CDS | 40.0% | |
| CTAAAAGCTTAAGGACAGCA+AGG | - | chr1_1:27624933-27624952 | Msa0016640:CDS | 40.0% | |
| AAAAGCTTAAGGACAGCAAG+GGG | - | chr1_1:27624935-27624954 | Msa0016640:CDS | 40.0% | |
| TTTAGTGAACTTCTGTCTGC+TGG | - | chr1_1:27625171-27625190 | Msa0016640:CDS | 40.0% | |
| TCTACAAACTAGGCCTAGTT+TGG | - | chr1_1:27625203-27625222 | Msa0016640:CDS | 40.0% | |
| AATGGTATTCTTGGTCACCT+GGG | - | chr1_1:27625249-27625268 | Msa0016640:CDS | 40.0% | |
| ! | GAACCTTGTTCGCCTATTTT+TGG | - | chr1_1:27625333-27625352 | Msa0016640:CDS | 40.0% |
| GTTTCCATCCTGCCAAAAAT+AGG | + | chr1_1:27625348-27625367 | None:intergenic | 40.0% | |
| GTATACGATACCTGAATACG+TGG | + | chr1_1:27625463-27625482 | None:intergenic | 40.0% | |
| TCAAAGTAGCTGTGAGTACT+TGG | - | chr1_1:27625631-27625650 | Msa0016640:CDS | 40.0% | |
| ATGGAGATAATGAACTGGAC+CGG | + | chr1_1:27625880-27625899 | None:intergenic | 40.0% | |
| CGAGAATGGAGATAATGAAC+TGG | + | chr1_1:27625885-27625904 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTTGGTGGTGTCCG+AGG | - | chr1_1:27626407-27626426 | Msa0016640:intron | 40.0% |
| CATAATATATGCAAGGTCCG+GGG | + | chr1_1:27626439-27626458 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | + | chr1_1:27626440-27626459 | None:intergenic | 40.0% | |
| !! | GGTTAGTAGTGGAACTTTTG+CGG | + | chr1_1:27626907-27626926 | None:intergenic | 40.0% |
| TTATGTCTCACGGTTAGTAG+TGG | + | chr1_1:27626918-27626937 | None:intergenic | 40.0% | |
| ACTACTAACCGTGAGACATA+AGG | - | chr1_1:27626917-27626936 | Msa0016640:intron | 40.0% | |
| CTACTAACCGTGAGACATAA+GGG | - | chr1_1:27626918-27626937 | Msa0016640:intron | 40.0% | |
| TACTAACCGTGAGACATAAG+GGG | - | chr1_1:27626919-27626938 | Msa0016640:intron | 40.0% | |
| TTTGGATAGATGGACAACCA+CGG | - | chr1_1:27627044-27627063 | Msa0016640:intron | 40.0% | |
| TTGTTAACATCCTGCAACCT+GGG | - | chr1_1:27627226-27627245 | Msa0016640:intron | 40.0% | |
| ATTACAACTACACAAAGCCC+AGG | + | chr1_1:27627246-27627265 | None:intergenic | 40.0% | |
| CCTACACAGTCTATACTTAC+AGG | + | chr1_1:27627375-27627394 | None:intergenic | 40.0% | |
| CCTGTAAGTATAGACTGTGT+AGG | - | chr1_1:27627372-27627391 | Msa0016640:intron | 40.0% | |
| TTCTTGTCTCTTCAGAGCAA+CGG | + | chr1_1:27627476-27627495 | None:intergenic | 40.0% | |
| ACTGAACAGAAAGCAAAACG+TGG | - | chr1_1:27627535-27627554 | Msa0016640:intron | 40.0% | |
| CAAAACGTGGAGTTAATGAG+AGG | - | chr1_1:27627548-27627567 | Msa0016640:intron | 40.0% | |
| ATGATTTCCTCTACCGAACA+TGG | - | chr1_1:27627733-27627752 | Msa0016640:CDS | 40.0% | |
| CTGGCTAATTATTCCTTCAC+CGG | - | chr1_1:27628036-27628055 | Msa0016640:CDS | 40.0% | |
| GGGACATAAAGAAAGAAGCT+GGG | + | chr1_1:27628096-27628115 | None:intergenic | 40.0% | |
| !! | GAAGTTGTTTCTTGTCATCC+AGG | - | chr1_1:27628214-27628233 | Msa0016640:CDS | 40.0% |
| TCATCCAGGCCAAACAAAAA+CGG | - | chr1_1:27628228-27628247 | Msa0016640:CDS | 40.0% | |
| !! | ACGGTTGTTCCGTTTTTGTT+TGG | + | chr1_1:27628240-27628259 | None:intergenic | 40.0% |
| CAAAAACGGAACAACCGTAA+AGG | - | chr1_1:27628242-27628261 | Msa0016640:CDS | 40.0% | |
| GCATCTCTTTCTTCTGAATC+AGG | + | chr1_1:27628452-27628471 | None:intergenic | 40.0% | |
| GAGATGCAAGTCCTGTTAAT+TGG | - | chr1_1:27628465-27628484 | Msa0016640:intron | 40.0% | |
| GCATCAGTATCCCAATTAAC+AGG | + | chr1_1:27628479-27628498 | None:intergenic | 40.0% | |
| TTGCTAATAGCCTCAGTTGA+AGG | + | chr1_1:27628515-27628534 | None:intergenic | 40.0% | |
| TCAACTGAGGCTATTAGCAA+TGG | - | chr1_1:27628515-27628534 | Msa0016640:intron | 40.0% | |
| !! | TACTGATTCTTTGCCTTCAG+TGG | - | chr1_1:27628622-27628641 | Msa0016640:intron | 40.0% |
| ! | TTTCCACCTTTTGTCTGTAG+AGG | - | chr1_1:27628772-27628791 | Msa0016640:intron | 40.0% |
| TTACCTCTACAGACAAAAGG+TGG | + | chr1_1:27628778-27628797 | None:intergenic | 40.0% | |
| GAGTAATTGGACAGCTGAAA+TGG | - | chr1_1:27628825-27628844 | Msa0016640:intron | 40.0% | |
| GCTGTTGATATTAACGAGTC+TGG | - | chr1_1:27628877-27628896 | Msa0016640:intron | 40.0% | |
| GATATTAACGAGTCTGGAAG+TGG | - | chr1_1:27628883-27628902 | Msa0016640:intron | 40.0% | |
| GTCTTTCCCTTGTAAGTGTT+TGG | - | chr1_1:27629175-27629194 | Msa0016640:CDS | 40.0% | |
| GTACTGTCCAAACACTTACA+AGG | + | chr1_1:27629185-27629204 | None:intergenic | 40.0% | |
| GAACCAACTATGCTTTCAAC+CGG | - | chr1_1:27629296-27629315 | Msa0016640:intron | 40.0% | |
| TTTACTCACTGAGTGATGCT+GGG | - | chr1_1:27629380-27629399 | Msa0016640:intron | 40.0% | |
| TGTTGTATGATACGGAGTGT+TGG | - | chr1_1:27629419-27629438 | Msa0016640:intron | 40.0% | |
| ! | GTTGTATGATACGGAGTGTT+GGG | - | chr1_1:27629420-27629439 | Msa0016640:intron | 40.0% |
| CGAGAATCAAGCAAGTGTAA+CGG | - | chr1_1:27629459-27629478 | Msa0016640:intron | 40.0% | |
| TCTTCTTACGACAGCATCTA+CGG | + | chr1_1:27629634-27629653 | None:intergenic | 40.0% | |
| CGTAAGAAGAGTAGATCAGA+TGG | - | chr1_1:27629644-27629663 | Msa0016640:intron | 40.0% | |
| AAGAAGAGTAGATCAGATGG+AGG | - | chr1_1:27629647-27629666 | Msa0016640:intron | 40.0% | |
| AGTCAAGTCAAAAGAGGTAG+AGG | - | chr1_1:27629672-27629691 | Msa0016640:intron | 40.0% | |
| TTGTGTTTCCCTTAGTAGAG+TGG | - | chr1_1:27630103-27630122 | Msa0016640:intron | 40.0% | |
| TGTGTTTCCCTTAGTAGAGT+GGG | - | chr1_1:27630104-27630123 | Msa0016640:intron | 40.0% | |
| GTCCTAACACTAAGTTTAGC+TGG | + | chr1_1:27630167-27630186 | None:intergenic | 40.0% | |
| ! | TGCACAGCCTCTTTCAATTT+TGG | + | chr1_1:27630361-27630380 | None:intergenic | 40.0% |
| ! | ACTTTCTTTTTCCTGAAGGG+TGG | - | chr1_1:27630454-27630473 | Msa0016640:intron | 40.0% |
| ! | CTTTCTTTTTCCTGAAGGGT+GGG | - | chr1_1:27630455-27630474 | Msa0016640:intron | 40.0% |
| ! | TTGCTGCGTTGTTTCAATAG+GGG | - | chr1_1:27630566-27630585 | Msa0016640:intron | 40.0% |
| CTCTTCTATTTGATAGGAGG+AGG | - | chr1_1:27630657-27630676 | Msa0016640:intron | 40.0% | |
| TTCTATTTGATAGGAGGAGG+AGG | - | chr1_1:27630660-27630679 | Msa0016640:intron | 40.0% | |
| AGAAAGAGATGACACCAGTA+GGG | - | chr1_1:27630758-27630777 | Msa0016640:intron | 40.0% | |
| TTCCTGACATTAACAGGTGA+GGG | + | chr1_1:27630817-27630836 | None:intergenic | 40.0% | |
| TTTCCTGACATTAACAGGTG+AGG | + | chr1_1:27630818-27630837 | None:intergenic | 40.0% | |
| TTTAGTGTCTCACAACAGAC+AGG | - | chr1_1:27630844-27630863 | Msa0016640:intron | 40.0% | |
| CACAAGTGACTATGATGTCA+AGG | - | chr1_1:27630971-27630990 | Msa0016640:intron | 40.0% | |
| TTACTATGAGTAGCAGGTGA+GGG | + | chr1_1:27631114-27631133 | None:intergenic | 40.0% | |
| ATTACTATGAGTAGCAGGTG+AGG | + | chr1_1:27631115-27631134 | None:intergenic | 40.0% | |
| GGAACATTACTATGAGTAGC+AGG | + | chr1_1:27631120-27631139 | None:intergenic | 40.0% | |
| ATTGCATTTCTGTACGACTG+AGG | + | chr1_1:27631141-27631160 | None:intergenic | 40.0% | |
| GTCGTACAGAAATGCAATGA+TGG | - | chr1_1:27631143-27631162 | Msa0016640:intron | 40.0% | |
| CGTACAGAAATGCAATGATG+GGG | - | chr1_1:27631145-27631164 | Msa0016640:intron | 40.0% | |
| ! | TGCAATGATGGGGAATCAAA+TGG | - | chr1_1:27631155-27631174 | Msa0016640:CDS | 40.0% |
| GAGCTATGGGACAAAAACAT+TGG | + | chr1_1:27631270-27631289 | None:intergenic | 40.0% | |
| !! | TCCCATAGCTCTGAAAGAAT+GGG | - | chr1_1:27631279-27631298 | Msa0016640:CDS | 40.0% |
| ACCCATTCTTTCAGAGCTAT+GGG | + | chr1_1:27631283-27631302 | None:intergenic | 40.0% | |
| AACCCATTCTTTCAGAGCTA+TGG | + | chr1_1:27631284-27631303 | None:intergenic | 40.0% | |
| ! | CTCTGAAAGAATGGGTTCTA+TGG | - | chr1_1:27631287-27631306 | Msa0016640:CDS | 40.0% |
| TACCAAAAGGAACACTAGAC+TGG | + | chr1_1:27631317-27631336 | None:intergenic | 40.0% | |
| CTTGGAACTCATTTGGCATT+TGG | + | chr1_1:27631515-27631534 | None:intergenic | 40.0% | |
| !! | CTTGATGATGAGCATGGTAT+TGG | - | chr1_1:27631609-27631628 | Msa0016640:intron | 40.0% |
| GTCTTCCAATCCTTCAATGA+TGG | - | chr1_1:27631654-27631673 | Msa0016640:intron | 40.0% | |
| GTGATCCATCATTGAAGGAT+TGG | + | chr1_1:27631662-27631681 | None:intergenic | 40.0% | |
| !! | AATCGACAGTTCACTTTTCC+CGG | - | chr1_1:27631690-27631709 | Msa0016640:intron | 40.0% |
| AAACCTACAAGAACTGGTTG+AGG | + | chr1_1:27631745-27631764 | None:intergenic | 40.0% | |
| TCTCTCAAACCTACAAGAAC+TGG | + | chr1_1:27631751-27631770 | None:intergenic | 40.0% | |
| CTTGTTGAAATCCAGGATCA+TGG | + | chr1_1:27631785-27631804 | None:intergenic | 40.0% | |
| CATGATCCTGGATTTCAACA+AGG | - | chr1_1:27631783-27631802 | Msa0016640:intron | 40.0% | |
| CGAGTCAAAATATCCTCTAG+AGG | + | chr1_1:27631817-27631836 | None:intergenic | 40.0% | |
| !!! | GAGGATATTTTGACTCGATG+AGG | - | chr1_1:27631820-27631839 | Msa0016640:intron | 40.0% |
| CCATATAGTGTACTTGCTTG+TGG | + | chr1_1:27631855-27631874 | None:intergenic | 40.0% | |
| CCACAAGCAAGTACACTATA+TGG | - | chr1_1:27631852-27631871 | Msa0016640:intron | 40.0% | |
| TTGCGAAATCCAGACATTGA+TGG | - | chr1_1:27631945-27631964 | Msa0016640:intron | 40.0% | |
| ! | TCGAATTTGACTGGTGTCAA+TGG | - | chr1_1:27631990-27632009 | Msa0016640:CDS | 40.0% |
| ACAGTATTCAGACCTTCGAA+TGG | - | chr1_1:27632017-27632036 | Msa0016640:CDS | 40.0% | |
| GGAGTCCATTACCAAAGTAG+AGG | + | chr1_1:27624477-27624496 | None:intergenic | 45.0% | |
| !! | AGTGGATTGAAGGCTCTTGA+AGG | - | chr1_1:27624503-27624522 | Msa0016640:three_prime_UTR | 45.0% |
| TCTTTCTCAGCACGGACAAT+TGG | + | chr1_1:27624587-27624606 | None:intergenic | 45.0% | |
| !! | TTCTCATCTTTTGGAGGGAG+AGG | + | chr1_1:27624665-27624684 | None:intergenic | 45.0% |
| CTCCCTCCAAAAGATGAGAA+AGG | - | chr1_1:27624665-27624684 | Msa0016640:CDS | 45.0% | |
| ! | GGACCTTTCTCATCTTTTGG+AGG | + | chr1_1:27624671-27624690 | None:intergenic | 45.0% |
| AGGTCCTCAAAATCGCACAA+AGG | - | chr1_1:27624685-27624704 | Msa0016640:CDS | 45.0% | |
| ! | CTCACCTTTGTGCGATTTTG+AGG | + | chr1_1:27624692-27624711 | None:intergenic | 45.0% |
| AATCGCACAAAGGTGAGAGA+TGG | - | chr1_1:27624695-27624714 | Msa0016640:CDS | 45.0% | |
| ! | AGGTGAGAGATGGTTTGTGT+TGG | - | chr1_1:27624705-27624724 | Msa0016640:CDS | 45.0% |
| ATGGTGACATAGGGAAGACT+TGG | - | chr1_1:27624755-27624774 | Msa0016640:CDS | 45.0% | |
| TGGTGACATAGGGAAGACTT+GGG | - | chr1_1:27624756-27624775 | Msa0016640:CDS | 45.0% | |
| AATGGGATTGCGCACTATCA+GGG | + | chr1_1:27624852-27624871 | None:intergenic | 45.0% | |
| AAATGGGATTGCGCACTATC+AGG | + | chr1_1:27624853-27624872 | None:intergenic | 45.0% | |
| GGGCCTATCGTTCAGAATAT+GGG | + | chr1_1:27625137-27625156 | None:intergenic | 45.0% | |
| TGGGCCTATCGTTCAGAATA+TGG | + | chr1_1:27625138-27625157 | None:intergenic | 45.0% | |
| GAATGGTATTCTTGGTCACC+TGG | - | chr1_1:27625248-27625267 | Msa0016640:CDS | 45.0% | |
| ACCTGGGAAGTTGTTGTCAA+TGG | - | chr1_1:27625265-27625284 | Msa0016640:CDS | 45.0% | |
| TCCATTGACAACAACTTCCC+AGG | + | chr1_1:27625269-27625288 | None:intergenic | 45.0% | |
| CTGCCAAAAATAGGCGAACA+AGG | + | chr1_1:27625339-27625358 | None:intergenic | 45.0% | |
| !!! | CTTGTTCGCCTATTTTTGGC+AGG | - | chr1_1:27625337-27625356 | Msa0016640:CDS | 45.0% |
| !!! | TTCGCCTATTTTTGGCAGGA+TGG | - | chr1_1:27625341-27625360 | Msa0016640:CDS | 45.0% |
| ! | TTTTGGCAGGATGGAAACTC+TGG | - | chr1_1:27625350-27625369 | Msa0016640:CDS | 45.0% |
| TTTGGCAGGATGGAAACTCT+GGG | - | chr1_1:27625351-27625370 | Msa0016640:CDS | 45.0% | |
| !! | TGAAAGGCGTCTCACAGAAT+TGG | - | chr1_1:27625406-27625425 | Msa0016640:CDS | 45.0% |
| !! | GAAAGGCGTCTCACAGAATT+GGG | - | chr1_1:27625407-27625426 | Msa0016640:CDS | 45.0% |
| ! | AGTTCTAGTGGGAAAAGGCT+TGG | - | chr1_1:27625487-27625506 | Msa0016640:CDS | 45.0% |
| GGACCGGATGTAGCATATAT+TGG | + | chr1_1:27625864-27625883 | None:intergenic | 45.0% | |
| TGAAAGCCCCTTATGTCTCA+CGG | + | chr1_1:27626928-27626947 | None:intergenic | 45.0% | |
| TTGGATAGATGGACAACCAC+GGG | - | chr1_1:27627045-27627064 | Msa0016640:intron | 45.0% | |
| CTTGTTAACATCCTGCAACC+TGG | - | chr1_1:27627225-27627244 | Msa0016640:intron | 45.0% | |
| TAGACTGTGTAGGCTGTGAA+TGG | - | chr1_1:27627382-27627401 | Msa0016640:intron | 45.0% | |
| ! | GTGTAGGCTGTGAATGGATT+AGG | - | chr1_1:27627388-27627407 | Msa0016640:intron | 45.0% |
| AGGCAAAGAAGAAACAGGTG+TGG | - | chr1_1:27627578-27627597 | Msa0016640:intron | 45.0% | |
| TTGTGATCCATGTTCGGTAG+AGG | + | chr1_1:27627743-27627762 | None:intergenic | 45.0% | |
| ! | AGCTATTTCACGGGAATGCA+AGG | + | chr1_1:27627990-27628009 | None:intergenic | 45.0% |
| GCATTCCCGTGAAATAGCTT+AGG | - | chr1_1:27627991-27628010 | Msa0016640:CDS | 45.0% | |
| GGGGACATAAAGAAAGAAGC+TGG | + | chr1_1:27628097-27628116 | None:intergenic | 45.0% | |
| ACTAGTAGCAGGTATGCTAC+GGG | + | chr1_1:27628123-27628142 | None:intergenic | 45.0% | |
| CACTAGTAGCAGGTATGCTA+CGG | + | chr1_1:27628124-27628143 | None:intergenic | 45.0% | |
| GTAGCATACCTGCTACTAGT+GGG | - | chr1_1:27628123-27628142 | Msa0016640:CDS | 45.0% | |
| CCTTTAATCCCACTAGTAGC+AGG | + | chr1_1:27628134-27628153 | None:intergenic | 45.0% | |
| CCTGCTACTAGTGGGATTAA+AGG | - | chr1_1:27628131-27628150 | Msa0016640:CDS | 45.0% | |
| GGGTTTGTGAGAGTAGTTCT+GGG | - | chr1_1:27628169-27628188 | Msa0016640:CDS | 45.0% | |
| ACTTCTGTCAGCAGTTCAAG+AGG | + | chr1_1:27628199-27628218 | None:intergenic | 45.0% | |
| !! | TGTTCCGTTTTTGTTTGGCC+TGG | + | chr1_1:27628235-27628254 | None:intergenic | 45.0% |
| ACGGAACAACCGTAAAGGAA+AGG | - | chr1_1:27628247-27628266 | Msa0016640:CDS | 45.0% | |
| TAAGGATGAAAGGCCTACTG+TGG | - | chr1_1:27628277-27628296 | Msa0016640:CDS | 45.0% | |
| TTGTCATGTACCTCCACAGT+AGG | + | chr1_1:27628293-27628312 | None:intergenic | 45.0% | |
| CATGGATGAGGTTCAAACTC+TGG | - | chr1_1:27628352-27628371 | Msa0016640:CDS | 45.0% | |
| GGATGAAAAGCTTGATGCAC+TGG | - | chr1_1:27628373-27628392 | Msa0016640:CDS | 45.0% | |
| ! | CTTTTCTCGGCCATTCCATT+TGG | + | chr1_1:27628563-27628582 | None:intergenic | 45.0% |
| CAAATGGAATGGCCGAGAAA+AGG | - | chr1_1:27628561-27628580 | Msa0016640:intron | 45.0% | |
| ! | CACTGAACTGCACCTTTTCT+CGG | + | chr1_1:27628576-27628595 | None:intergenic | 45.0% |
| GTGATGAATGACCCCTACAA+GGG | - | chr1_1:27628644-27628663 | Msa0016640:intron | 45.0% | |
| TGATGAATGACCCCTACAAG+GGG | - | chr1_1:27628645-27628664 | Msa0016640:intron | 45.0% | |
| AAGTTCAGAAATCGCCTAGC+AGG | - | chr1_1:27628687-27628706 | Msa0016640:intron | 45.0% | |
| TAACGAGTCTGGAAGTGGTA+AGG | - | chr1_1:27628888-27628907 | Msa0016640:intron | 45.0% | |
| GTAGGTGAATCTGAGTCTGA+GGG | - | chr1_1:27628910-27628929 | Msa0016640:intron | 45.0% | |
| GTGCAATCTGCTTACAGGAT+CGG | - | chr1_1:27628932-27628951 | Msa0016640:intron | 45.0% | |
| CAACAAGCCTGTTGTCAGAA+AGG | - | chr1_1:27628966-27628985 | Msa0016640:intron | 45.0% | |
| GCTATTGAGGGAGATACACA+TGG | - | chr1_1:27629114-27629133 | Msa0016640:CDS | 45.0% | |
| ACTTCTAACATGCATCCTCG+CGG | - | chr1_1:27629148-27629167 | Msa0016640:CDS | 45.0% | |
| GTTTACTCACTGAGTGATGC+TGG | - | chr1_1:27629379-27629398 | Msa0016640:intron | 45.0% | |
| ACCGGCGATGTTGTATGATA+CGG | - | chr1_1:27629411-27629430 | Msa0016640:intron | 45.0% | |
| TCCGTATCATACAACATCGC+CGG | + | chr1_1:27629415-27629434 | None:intergenic | 45.0% | |
| ! | AAGCAAGTGTAACGGAGATG+AGG | - | chr1_1:27629467-27629486 | Msa0016640:intron | 45.0% |
| GGATGAGTGGTAAGACTAGA+CGG | - | chr1_1:27629500-27629519 | Msa0016640:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+GGG | - | chr1_1:27629501-27629520 | Msa0016640:intron | 45.0% | |
| AGACTAGACGGGACATGATT+AGG | - | chr1_1:27629512-27629531 | Msa0016640:intron | 45.0% | |
| ACACCATTAGAGAGAGAGAG+TGG | - | chr1_1:27629539-27629558 | Msa0016640:intron | 45.0% | |
| CACCATTAGAGAGAGAGAGT+GGG | - | chr1_1:27629540-27629559 | Msa0016640:intron | 45.0% | |
| ACCATTAGAGAGAGAGAGTG+GGG | - | chr1_1:27629541-27629560 | Msa0016640:intron | 45.0% | |
| CTTCTTACGACAGCATCTAC+GGG | + | chr1_1:27629633-27629652 | None:intergenic | 45.0% | |
| GAGGAGAGTCAAGTCAAAAG+AGG | - | chr1_1:27629666-27629685 | Msa0016640:intron | 45.0% | |
| ! | CAATGAGTTGGATCCGAATG+TGG | - | chr1_1:27629743-27629762 | Msa0016640:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_1:27629812-27629831 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_1:27629813-27629832 | None:intergenic | 45.0% |
| TGCAATCCAATAAGAGCCCA+AGG | + | chr1_1:27630130-27630149 | None:intergenic | 45.0% | |
| !! | ACTGGTGTCATCTCTTTCTG+TGG | + | chr1_1:27630757-27630776 | None:intergenic | 45.0% |
| CAGAAAGAGATGACACCAGT+AGG | - | chr1_1:27630757-27630776 | Msa0016640:intron | 45.0% | |
| ! | AAGTTTCTAGAGGGACTCCT+CGG | + | chr1_1:27630793-27630812 | None:intergenic | 45.0% |
| ! | GGTGAGGGTAAGTTTCTAGA+GGG | + | chr1_1:27630802-27630821 | None:intergenic | 45.0% |
| ! | AGGTGAGGGTAAGTTTCTAG+AGG | + | chr1_1:27630803-27630822 | None:intergenic | 45.0% |
| TACCCTCACCTGTTAATGTC+AGG | - | chr1_1:27630812-27630831 | Msa0016640:intron | 45.0% | |
| !!! | GGTTTTTCAGTTGGTCTTGG+AGG | + | chr1_1:27630946-27630965 | None:intergenic | 45.0% |
| ACCACAGAGACAGAAGTAGT+TGG | + | chr1_1:27631033-27631052 | None:intergenic | 45.0% | |
| AGAGGTGGAATGAGTGAAAC+TGG | + | chr1_1:27631193-27631212 | None:intergenic | 45.0% | |
| ! | ACTCATTCCACCTCTAGTTC+AGG | - | chr1_1:27631198-27631217 | Msa0016640:CDS | 45.0% |
| TGCTGTGAATAGCCTGAAGA+TGG | + | chr1_1:27631231-27631250 | None:intergenic | 45.0% | |
| !! | GTCCCATAGCTCTGAAAGAA+TGG | - | chr1_1:27631278-27631297 | Msa0016640:CDS | 45.0% |
| ! | GAAAGAATGGGTTCTATGGG+TGG | - | chr1_1:27631291-27631310 | Msa0016640:CDS | 45.0% |
| !!! | TTTTGCAAAATGGGCTGCAG+TGG | - | chr1_1:27631352-27631371 | Msa0016640:intron | 45.0% |
| AGTGGATGGAGAGTTCTCAA+AGG | - | chr1_1:27631370-27631389 | Msa0016640:intron | 45.0% | |
| GTGGATGGAGAGTTCTCAAA+GGG | - | chr1_1:27631371-27631390 | Msa0016640:intron | 45.0% | |
| TTCATAGTGCATGCTTCTGC+TGG | + | chr1_1:27631424-27631443 | None:intergenic | 45.0% | |
| ACATCATTGAGTCGGGATGA+TGG | + | chr1_1:27631447-27631466 | None:intergenic | 45.0% | |
| ! | CTACTGGTTGGAACAAATCC+AGG | + | chr1_1:27631476-27631495 | None:intergenic | 45.0% |
| !! | GATCTGCTTGATGATGAGCA+TGG | - | chr1_1:27631603-27631622 | Msa0016640:intron | 45.0% |
| TTGGAAGACTGAACTTGTCC+CGG | + | chr1_1:27631643-27631662 | None:intergenic | 45.0% | |
| !! | GTTCACTTTTCCCGGAAACT+TGG | - | chr1_1:27631698-27631717 | Msa0016640:intron | 45.0% |
| GATCCTCAACCAGTTCTTGT+AGG | - | chr1_1:27631739-27631758 | Msa0016640:intron | 45.0% | |
| TCACGAAGTTACCATGATCC+TGG | - | chr1_1:27631771-27631790 | Msa0016640:intron | 45.0% | |
| !! | ATGGGTTGGTTCCAAACCAA+TGG | - | chr1_1:27631889-27631908 | Msa0016640:intron | 45.0% |
| ACCTTCGAATGGTCAGTAGA+GGG | - | chr1_1:27632028-27632047 | Msa0016640:CDS | 45.0% | |
| TGGTCAGTAGAGGGAAATGA+TGG | - | chr1_1:27632037-27632056 | Msa0016640:CDS | 45.0% | |
| !! | GTCTGTTTTAGATTGGAGCG+AGG | - | chr1_1:27632096-27632115 | Msa0016640:CDS | 45.0% |
| !!! | TTTTTTTAAATATTTTTGAA+TGG | - | chr1_1:27624879-27624898 | Msa0016640:CDS | 5.0% |
| !! | TATATTTAATTAGTTATTAT+CGG | + | chr1_1:27626298-27626317 | None:intergenic | 5.0% |
| !! | AATAAGATAAAAAAATAATT+TGG | - | chr1_1:27629913-27629932 | Msa0016640:intron | 5.0% |
| GGCCAGACCAAGTCCAAAAA+AGG | - | chr1_1:27624524-27624543 | Msa0016640:three_prime_UTR | 50.0% | |
| TTGCGCACTATCAGGGTTGT+TGG | + | chr1_1:27624845-27624864 | None:intergenic | 50.0% | |
| TTGGCAGGATGGAAACTCTG+GGG | - | chr1_1:27625352-27625371 | Msa0016640:CDS | 50.0% | |
| TTGTCCTTGCCCACGTATTC+AGG | - | chr1_1:27625450-27625469 | Msa0016640:CDS | 50.0% | |
| GATACCTGAATACGTGGGCA+AGG | + | chr1_1:27625457-27625476 | None:intergenic | 50.0% | |
| GACAACCACGGGACATGATT+TGG | - | chr1_1:27627056-27627075 | Msa0016640:intron | 50.0% | |
| ATCGTCCAAATCATGTCCCG+TGG | + | chr1_1:27627064-27627083 | None:intergenic | 50.0% | |
| AGAGCTCATCCGTGAAGAAG+AGG | - | chr1_1:27627495-27627514 | Msa0016640:intron | 50.0% | |
| TGGCAAGATACTTCCGGTGA+AGG | + | chr1_1:27628052-27628071 | None:intergenic | 50.0% | |
| AGCAGGTATGCTACGGGAAA+GGG | + | chr1_1:27628117-27628136 | None:intergenic | 50.0% | |
| TAGCAGGTATGCTACGGGAA+AGG | + | chr1_1:27628118-27628137 | None:intergenic | 50.0% | |
| CGTAGCATACCTGCTACTAG+TGG | - | chr1_1:27628122-27628141 | Msa0016640:CDS | 50.0% | |
| GGGGTTTGTGAGAGTAGTTC+TGG | - | chr1_1:27628168-27628187 | Msa0016640:CDS | 50.0% | |
| CATGACAAGCAGCAAGACGA+TGG | - | chr1_1:27628305-27628324 | Msa0016640:CDS | 50.0% | |
| GGAAGCTCATCCTTCAACTG+AGG | - | chr1_1:27628502-27628521 | Msa0016640:intron | 50.0% | |
| TACGCCTGTGCCAAATGGAA+TGG | - | chr1_1:27628550-27628569 | Msa0016640:intron | 50.0% | |
| GGGTCATTCATCACCACTGA+AGG | + | chr1_1:27628638-27628657 | None:intergenic | 50.0% | |
| GGTGATGAATGACCCCTACA+AGG | - | chr1_1:27628643-27628662 | Msa0016640:intron | 50.0% | |
| AGAAGGAGTTCCCCTTGTAG+GGG | + | chr1_1:27628658-27628677 | None:intergenic | 50.0% | |
| GAGAAGGAGTTCCCCTTGTA+GGG | + | chr1_1:27628659-27628678 | None:intergenic | 50.0% | |
| TGAGAAGGAGTTCCCCTTGT+AGG | + | chr1_1:27628660-27628679 | None:intergenic | 50.0% | |
| GACAGCTGAAATGGACAGTC+AGG | - | chr1_1:27628834-27628853 | Msa0016640:intron | 50.0% | |
| GAAATGGACAGTCAGGCATC+TGG | - | chr1_1:27628841-27628860 | Msa0016640:intron | 50.0% | |
| GAGTCTGGAAGTGGTAAGGT+AGG | - | chr1_1:27628892-27628911 | Msa0016640:intron | 50.0% | |
| GGTAGGTGAATCTGAGTCTG+AGG | - | chr1_1:27628909-27628928 | Msa0016640:intron | 50.0% | |
| ! | TGAGGGTGCAATCTGCTTAC+AGG | - | chr1_1:27628927-27628946 | Msa0016640:intron | 50.0% |
| GCTTACAGGATCGGTTGAAG+TGG | - | chr1_1:27628941-27628960 | Msa0016640:intron | 50.0% | |
| AAGGGAAAGACTTTACCGCG+AGG | + | chr1_1:27629166-27629185 | None:intergenic | 50.0% | |
| ! | TCGCCGGTTGAAAGCATAGT+TGG | + | chr1_1:27629302-27629321 | None:intergenic | 50.0% |
| !! | GTATGATACGGAGTGTTGGG+CGG | - | chr1_1:27629423-27629442 | Msa0016640:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr1_1:27629487-27629506 | Msa0016640:intron | 50.0% | |
| CCATTAGAGAGAGAGAGTGG+GGG | - | chr1_1:27629542-27629561 | Msa0016640:intron | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | + | chr1_1:27629800-27629819 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | - | chr1_1:27629799-27629818 | Msa0016640:intron | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | - | chr1_1:27629800-27629819 | Msa0016640:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | - | chr1_1:27629806-27629825 | Msa0016640:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_1:27629814-27629833 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_1:27629811-27629830 | Msa0016640:intron | 50.0% | |
| TTTCCTGAAGGGTGGGAGAT+TGG | - | chr1_1:27630462-27630481 | Msa0016640:intron | 50.0% | |
| TTCCTGAAGGGTGGGAGATT+GGG | - | chr1_1:27630463-27630482 | Msa0016640:intron | 50.0% | |
| TGTGGACTCCCATTAGCAAC+AGG | + | chr1_1:27630739-27630758 | None:intergenic | 50.0% | |
| !! | TTCAGTTGGTCTTGGAGGTG+AGG | + | chr1_1:27630941-27630960 | None:intergenic | 50.0% |
| ! | GAGACAGAAGTAGTTGGCCT+GGG | + | chr1_1:27631027-27631046 | None:intergenic | 50.0% |
| AGAGACAGAAGTAGTTGGCC+TGG | + | chr1_1:27631028-27631047 | None:intergenic | 50.0% | |
| GCCAACTACTTCTGTCTCTG+TGG | - | chr1_1:27631029-27631048 | Msa0016640:intron | 50.0% | |
| ! | GGCCAGTCTAGTGTTCCTTT+TGG | - | chr1_1:27631312-27631331 | Msa0016640:intron | 50.0% |
| AAGCCAGCAGGAGTTCTCAA+AGG | - | chr1_1:27631394-27631413 | Msa0016640:intron | 50.0% | |
| AGCCAGCAGGAGTTCTCAAA+GGG | - | chr1_1:27631395-27631414 | Msa0016640:intron | 50.0% | |
| ! | TTCCCTTTGAGAACTCCTGC+TGG | + | chr1_1:27631400-27631419 | None:intergenic | 50.0% |
| GTGCAGGCTTGGAACTCATT+TGG | + | chr1_1:27631522-27631541 | None:intergenic | 50.0% | |
| AGTTCCAAGCCTGCACATCT+AGG | - | chr1_1:27631526-27631545 | Msa0016640:intron | 50.0% | |
| ACATCTAGGCGTCAGAACCA+AGG | - | chr1_1:27631540-27631559 | Msa0016640:intron | 50.0% | |
| CATCTAGGCGTCAGAACCAA+GGG | - | chr1_1:27631541-27631560 | Msa0016640:intron | 50.0% | |
| TCAGAACCAAGGGTTGTTGG+CGG | - | chr1_1:27631551-27631570 | Msa0016640:intron | 50.0% | |
| ! | CATGGTATTGGGAACACAGC+CGG | - | chr1_1:27631621-27631640 | Msa0016640:intron | 50.0% |
| ! | ATGGTATTGGGAACACAGCC+GGG | - | chr1_1:27631622-27631641 | Msa0016640:intron | 50.0% |
| ! | CAAGGGTATAACCCCTCTAG+AGG | - | chr1_1:27631801-27631820 | Msa0016640:intron | 50.0% |
| GGTTCCAAACCAATGGCAGA+TGG | - | chr1_1:27631896-27631915 | Msa0016640:intron | 50.0% | |
| GACCTTCGAATGGTCAGTAG+AGG | - | chr1_1:27632027-27632046 | Msa0016640:CDS | 50.0% | |
| TCCCTCTACTGACCATTCGA+AGG | + | chr1_1:27632032-27632051 | None:intergenic | 50.0% | |
| ACATGCGGCGCCTAGATGTT+TGG | + | chr1_1:27624388-27624407 | None:intergenic | 55.0% | |
| ! | ATCTAGGCGCCGCATGTCTA+GGG | - | chr1_1:27624391-27624410 | Msa0016640:three_prime_UTR | 55.0% |
| TCAGCACGGACAATTGGAGC+TGG | + | chr1_1:27624581-27624600 | None:intergenic | 55.0% | |
| GTCTCACAGAATTGGGTCGC+AGG | - | chr1_1:27625414-27625433 | Msa0016640:CDS | 55.0% | |
| AGAATTGGGTCGCAGGACTC+TGG | - | chr1_1:27625421-27625440 | Msa0016640:CDS | 55.0% | |
| CTACACAAAGCCCAGGTTGC+AGG | + | chr1_1:27627239-27627258 | None:intergenic | 55.0% | |
| TCTTCAGAGCAACGGCTTCC+TGG | + | chr1_1:27627468-27627487 | None:intergenic | 55.0% | |
| TCCGTGAAGAAGAGGCAGCA+TGG | - | chr1_1:27627503-27627522 | Msa0016640:intron | 55.0% | |
| GCCATGCTGCCTCTTCTTCA+CGG | + | chr1_1:27627507-27627526 | None:intergenic | 55.0% | |
| TGAAGAAGAGGCAGCATGGC+TGG | - | chr1_1:27627507-27627526 | Msa0016640:intron | 55.0% | |
| GCAGGTATGCTACGGGAAAG+GGG | + | chr1_1:27628116-27628135 | None:intergenic | 55.0% | |
| GGATGAAAGGCCTACTGTGG+AGG | - | chr1_1:27628280-27628299 | Msa0016640:CDS | 55.0% | |
| CGTCTTACGCCTGTGCCAAA+TGG | - | chr1_1:27628545-27628564 | Msa0016640:intron | 55.0% | |
| TCGGCCATTCCATTTGGCAC+AGG | + | chr1_1:27628557-27628576 | None:intergenic | 55.0% | |
| ACTCACTGAGTGATGCTGGG+CGG | - | chr1_1:27629383-27629402 | Msa0016640:intron | 55.0% | |
| TGATGCTGGGCGGTTTAGAC+CGG | - | chr1_1:27629393-27629412 | Msa0016640:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr1_1:27629479-27629498 | Msa0016640:intron | 55.0% | |
| CCCCCACTCTCTCTCTCTAA+TGG | + | chr1_1:27629545-27629564 | None:intergenic | 55.0% | |
| TCCCTTAGTAGAGTGGGCCT+TGG | - | chr1_1:27630110-27630129 | Msa0016640:intron | 55.0% | |
| CCCAAGGCCCACTCTACTAA+GGG | + | chr1_1:27630114-27630133 | None:intergenic | 55.0% | |
| CCCTTAGTAGAGTGGGCCTT+GGG | - | chr1_1:27630111-27630130 | Msa0016640:intron | 55.0% | |
| AGTGGGCCTTGGGCTCTTAT+TGG | - | chr1_1:27630121-27630140 | Msa0016640:intron | 55.0% | |
| AACCCAATCTCCCACCCTTC+AGG | + | chr1_1:27630468-27630487 | None:intergenic | 55.0% | |
| GAAGGGTGGGAGATTGGGTT+TGG | - | chr1_1:27630468-27630487 | Msa0016640:intron | 55.0% | |
| GTCTTGGAGGTGAGGTCTTC+TGG | + | chr1_1:27630933-27630952 | None:intergenic | 55.0% | |
| AAGGCCTTCCAGTGCTCCTT+TGG | - | chr1_1:27630990-27631009 | Msa0016640:intron | 55.0% | |
| !! | GGAACCAAAGGAGCACTGGA+AGG | + | chr1_1:27630997-27631016 | None:intergenic | 55.0% |
| ! | TCCAGTGCTCCTTTGGTTCC+TGG | - | chr1_1:27630997-27631016 | Msa0016640:intron | 55.0% |
| ! | ACCAGGAACCAAAGGAGCAC+TGG | + | chr1_1:27631001-27631020 | None:intergenic | 55.0% |
| ! | AGTGCTCCTTTGGTTCCTGG+TGG | - | chr1_1:27631000-27631019 | Msa0016640:intron | 55.0% |
| GTGAGGGATCAGGACCCAAT+CGG | + | chr1_1:27631098-27631117 | None:intergenic | 55.0% | |
| TGAGTAGCAGGTGAGGGATC+AGG | + | chr1_1:27631108-27631127 | None:intergenic | 55.0% | |
| !! | GCAAAATGGGCTGCAGTGGA+TGG | - | chr1_1:27631356-27631375 | Msa0016640:intron | 55.0% |
| GTTCTCAAAGGGAAGCCAGC+AGG | - | chr1_1:27631382-27631401 | Msa0016640:intron | 55.0% | |
| GTTCTGACGCCTAGATGTGC+AGG | + | chr1_1:27631538-27631557 | None:intergenic | 55.0% | |
| GCGTCAGAACCAAGGGTTGT+TGG | - | chr1_1:27631548-27631567 | Msa0016640:intron | 55.0% | |
| ACTCATCCGCCAACAACCCT+TGG | + | chr1_1:27631560-27631579 | None:intergenic | 55.0% | |
| ! | CCAGCCATCTGCCATTGGTT+TGG | + | chr1_1:27631903-27631922 | None:intergenic | 55.0% |
| CCAAACCAATGGCAGATGGC+TGG | - | chr1_1:27631900-27631919 | Msa0016640:intron | 55.0% | |
| CAGAACCAGCCATCTGCCAT+TGG | + | chr1_1:27631908-27631927 | None:intergenic | 55.0% | |
| ! | CATCTAGGCGCCGCATGTCT+AGG | - | chr1_1:27624390-27624409 | Msa0016640:three_prime_UTR | 60.0% |
| AAGGTCCGGGGTTCGAACCT+CGG | + | chr1_1:27626427-27626446 | None:intergenic | 60.0% | |
| GCCCAAGGCCCACTCTACTA+AGG | + | chr1_1:27630115-27630134 | None:intergenic | 60.0% | |
| CTGGGACCACCAGGAACCAA+AGG | + | chr1_1:27631009-27631028 | None:intergenic | 60.0% | |
| ! | CTTTGGTTCCTGGTGGTCCC+AGG | - | chr1_1:27631007-27631026 | Msa0016640:intron | 60.0% |
| AGCGAGTGCAACTGGCCGAT+TGG | - | chr1_1:27631080-27631099 | Msa0016640:intron | 60.0% | |
| GCGAGTGCAACTGGCCGATT+GGG | - | chr1_1:27631081-27631100 | Msa0016640:intron | 60.0% | |
| GACGCCTAGATGTGCAGGCT+TGG | + | chr1_1:27631533-27631552 | None:intergenic | 60.0% | |
| GGTGTCCGAGGTTCGAACCC+CGG | - | chr1_1:27626419-27626438 | Msa0016640:intron | 65.0% | |
| TCTAGAGGGACTCCTCGGCG+AGG | + | chr1_1:27630788-27630807 | None:intergenic | 65.0% | |
| ! | GTAGTTGGCCTGGGACCACC+AGG | + | chr1_1:27631018-27631037 | None:intergenic | 65.0% |
| CTCGCTGAGCGTGCAAGAGG+TGG | + | chr1_1:27631066-27631085 | None:intergenic | 65.0% | |
| GCACTCGCTGAGCGTGCAAG+AGG | + | chr1_1:27631069-27631088 | None:intergenic | 65.0% | |
| GCACGCTCAGCGAGTGCAAC+TGG | - | chr1_1:27631072-27631091 | Msa0016640:intron | 65.0% | |
| CTCGGCGAGGATGGCCCTAC+TGG | + | chr1_1:27630775-27630794 | None:intergenic | 70.0% | |
| CAGTAGGGCCATCCTCGCCG+AGG | - | chr1_1:27630773-27630792 | Msa0016640:intron | 70.0% | |
| GAGGGACTCCTCGGCGAGGA+TGG | + | chr1_1:27630784-27630803 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 27624360 | 27632317 | 27624360 | ID=Msa0016640;Name=Msa0016640 |
| chr1_1 | mRNA | 27624360 | 27632317 | 27624360 | ID=Msa0016640-mRNA-1;Parent=Msa0016640;Name=Msa0016640-mRNA-1;_AED=0.02;_eAED=0.02;_QI=44|0.8|0.66|1|1|1|6|271|905 |
| chr1_1 | exon | 27624360 | 27626004 | 27624360 | ID=Msa0016640-mRNA-1:exon:9298;Parent=Msa0016640-mRNA-1 |
| chr1_1 | exon | 27627690 | 27627885 | 27627690 | ID=Msa0016640-mRNA-1:exon:9297;Parent=Msa0016640-mRNA-1 |
| chr1_1 | exon | 27627969 | 27628441 | 27627969 | ID=Msa0016640-mRNA-1:exon:9296;Parent=Msa0016640-mRNA-1 |
| chr1_1 | exon | 27629083 | 27629283 | 27629083 | ID=Msa0016640-mRNA-1:exon:9295;Parent=Msa0016640-mRNA-1 |
| chr1_1 | exon | 27631148 | 27631318 | 27631148 | ID=Msa0016640-mRNA-1:exon:9294;Parent=Msa0016640-mRNA-1 |
| chr1_1 | exon | 27631971 | 27632317 | 27631971 | ID=Msa0016640-mRNA-1:exon:9293;Parent=Msa0016640-mRNA-1 |
| chr1_1 | five_prime_UTR | 27632274 | 27632317 | 27632274 | ID=Msa0016640-mRNA-1:five_prime_utr;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27631971 | 27632273 | 27631971 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27631148 | 27631318 | 27631148 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27629083 | 27629283 | 27629083 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27627969 | 27628441 | 27627969 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27627690 | 27627885 | 27627690 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | CDS | 27624631 | 27626004 | 27624631 | ID=Msa0016640-mRNA-1:cds;Parent=Msa0016640-mRNA-1 |
| chr1_1 | three_prime_UTR | 27624360 | 27624630 | 27624360 | ID=Msa0016640-mRNA-1:three_prime_utr;Parent=Msa0016640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
