AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0803640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0803640 MtrunA17_Chr5g0412301 95.629 572 25 0 1 572 1 572 0.0 1144
Msa0803640 MtrunA17_Chr1g0210871 78.246 570 115 4 1 562 1 569 0.0 900
Msa0803640 MtrunA17_Chr7g0217951 50.000 454 200 6 1 448 1 433 9.14e-141 416
Msa0803640 MtrunA17_Chr5g0410781 51.818 220 101 2 234 448 27 246 4.40e-74 236
Msa0803640 MtrunA17_Chr3g0117631 31.077 325 172 8 233 549 23 303 5.03e-39 145
Msa0803640 MtrunA17_Chr4g0059061 31.438 299 159 8 266 559 46 303 9.24e-38 142
Msa0803640 MtrunA17_Chr8g0380321 28.136 295 160 6 270 553 26 279 1.26e-30 121
Msa0803640 MtrunA17_Chr2g0323961 55.556 72 32 0 90 161 1 72 1.49e-24 100
Msa0803640 MtrunA17_Chr2g0323961 39.735 151 43 4 271 418 72 177 3.90e-24 99.8
Msa0803640 MtrunA17_Chr7g0238751 40.625 96 52 2 235 325 28 123 1.88e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0803640 AT1G32230.3 41.667 564 294 13 17 560 21 569 3.32e-136 408
Msa0803640 AT1G32230.6 41.623 567 296 13 17 563 21 572 4.80e-136 408
Msa0803640 AT1G32230.4 41.623 567 296 13 17 563 21 572 4.80e-136 408
Msa0803640 AT1G32230.2 41.623 567 296 13 17 563 21 572 4.80e-136 408
Msa0803640 AT1G32230.5 41.623 567 296 13 17 563 21 572 4.80e-136 408
Msa0803640 AT1G32230.1 41.828 569 293 15 17 563 21 573 2.15e-135 407
Msa0803640 AT2G35510.1 39.619 578 320 11 1 560 1 567 1.58e-124 378
Msa0803640 AT2G35510.3 39.619 578 320 11 1 560 1 567 1.58e-124 378
Msa0803640 AT2G35510.2 40.959 459 252 8 1 448 1 451 7.37e-108 331
Msa0803640 AT1G70440.2 28.190 337 190 8 226 550 2 298 2.03e-38 144
Msa0803640 AT1G70440.1 28.190 337 190 8 226 550 2 298 2.03e-38 144
Msa0803640 AT1G23550.1 33.333 237 117 5 316 548 109 308 9.83e-37 139
Msa0803640 AT5G62520.1 29.644 253 130 5 301 549 89 297 1.26e-26 110
Msa0803640 AT3G47720.1 26.667 270 136 7 292 550 85 303 7.22e-23 100
Msa0803640 AT5G62520.2 33.562 146 88 3 301 442 89 229 3.29e-20 90.5

Find 188 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTGATATTGACGAAAA+TGG 0.188994 5_3:+18906772 Msa0803640:CDS
TCAGAATCAGCATAAATTTC+AGG 0.192300 5_3:-18905695 None:intergenic
TGTTTGACAACTTCGTTTCT+TGG 0.207598 5_3:-18905350 None:intergenic
CATTTAGAAATTGAAATAAA+TGG 0.220833 5_3:+18905800 Msa0803640:CDS
ATATGCATTATCTGCAATTC+AGG 0.249387 5_3:+18908378 Msa0803640:CDS
TTATTCATGGATTTAGATAT+TGG 0.267892 5_3:-18902774 None:intergenic
AGAATTTCATATTGTTTAAT+CGG 0.272064 5_3:+18909147 Msa0803640:three_prime_UTR
GATCAGGATTATAGGTGTTT+TGG 0.273923 5_3:+18903278 Msa0803640:intron
AGCATGACATCAAGAATATT+TGG 0.282378 5_3:-18905077 None:intergenic
CCTCGCTTCCATCTAGGGTT+AGG 0.283026 5_3:+18902719 Msa0803640:five_prime_UTR
ATAGTTCAAACCTTAAAATT+AGG 0.283459 5_3:+18908967 Msa0803640:three_prime_UTR
ATTTAATATCATTAGGATCT+TGG 0.284189 5_3:-18905775 None:intergenic
CCACCGCCTCGCTTCCATCT+AGG 0.287838 5_3:+18902713 Msa0803640:five_prime_UTR
TTGAAACTAACAACATATTC+TGG 0.302685 5_3:-18906964 None:intergenic
TGATAGACCATCAAACGTTC+TGG 0.315101 5_3:-18905473 None:intergenic
TTCTCCACTATCCTGATTGC+AGG 0.320979 5_3:-18905735 None:intergenic
CAAGGTTTCTGCGAAGGATA+TGG 0.322660 5_3:+18908346 Msa0803640:CDS
CCGTGTAATAATGGGGAATA+TGG 0.323010 5_3:+18906816 Msa0803640:CDS
CACTTTGCGCCGTAGATTGT+TGG 0.333114 5_3:+18909050 Msa0803640:three_prime_UTR
ATGGAACCTTGTTAAGTATT+GGG 0.334730 5_3:+18908784 Msa0803640:exon
AGAAAAGTACCTTGCTTTGA+AGG 0.336075 5_3:-18908634 None:intergenic
TGTATATGGAAGGTTGGATT+TGG 0.339592 5_3:+18905997 Msa0803640:CDS
GTTGGTAGTGCAGTTGTATA+TGG 0.343580 5_3:+18905983 Msa0803640:CDS
AAATGTAATTTAATATCATT+AGG 0.344899 5_3:-18905782 None:intergenic
ACCATCTCGTGTGATCAAAA+TGG 0.346697 5_3:+18908765 Msa0803640:CDS
ATCCAAGATACTATATAGTA+TGG 0.349263 5_3:+18906914 Msa0803640:CDS
TGTACAGAAGATGTTTCTTA+AGG 0.349580 5_3:+18906024 Msa0803640:CDS
ATTGTGATATTGACGAAAAT+GGG 0.350719 5_3:+18906773 Msa0803640:CDS
CTGGTAATTACCAGGCAAAA+AGG 0.353126 5_3:+18908534 Msa0803640:intron
TATCAGATGAATTTGAAATC+TGG 0.365305 5_3:+18905623 Msa0803640:CDS
TTCCATACTATATAGTATCT+TGG 0.367221 5_3:-18906916 None:intergenic
GGAGAAAAGAATGTACAATA+TGG 0.368567 5_3:+18903299 Msa0803640:five_prime_UTR
AGAATATGTTGTTAGTTTCA+AGG 0.376305 5_3:+18906966 Msa0803640:CDS
AATGGAACCTTGTTAAGTAT+TGG 0.376678 5_3:+18908783 Msa0803640:exon
GCTTGGCTTGCTTCTTCTAA+AGG 0.378498 5_3:+18906184 Msa0803640:CDS
CTTAAGGGAACTAGTAGTTT+TGG 0.380222 5_3:+18906040 Msa0803640:CDS
GTACAGAAGATGTTTCTTAA+GGG 0.381330 5_3:+18906025 Msa0803640:CDS
GTCTCGTCAATCCAAGCAAT+AGG 0.384507 5_3:-18905656 None:intergenic
ATTGATGAAGATTCTCAGAT+TGG 0.386046 5_3:-18902565 None:intergenic
CGTTTGATGGTCTATCAAAA+TGG 0.393202 5_3:+18905479 Msa0803640:CDS
ATCTTCATCAATAGGTTACT+TGG 0.395668 5_3:+18902576 Msa0803640:five_prime_UTR
CGAAAATGGGGTTCGACACT+TGG 0.398654 5_3:+18906786 Msa0803640:CDS
GTTTGCAGCGCCCTATTGCT+TGG 0.403920 5_3:+18905645 Msa0803640:CDS
GCAGCAACCAAACAGAATTC+TGG 0.404525 5_3:-18905142 None:intergenic
GACTCATATTGGACGGTCAT+TGG 0.404817 5_3:+18905415 Msa0803640:CDS
GGAGTCGATGCTTCCAAGTT+GGG 0.405561 5_3:+18905821 Msa0803640:CDS
GACGCGCCTGAGTGAGAGAT+TGG 0.408085 5_3:-18902672 None:intergenic
CTCGCTTCCATCTAGGGTTA+GGG 0.413431 5_3:+18902720 Msa0803640:five_prime_UTR
AGAATGTTGTTGACTTGGTT+AGG 0.415750 5_3:+18905522 Msa0803640:CDS
CCAAGGACCAGAATTCTGTT+TGG 0.416022 5_3:+18905135 Msa0803640:five_prime_UTR
AGTAGCAATAACATGGGAAA+TGG 0.417478 5_3:+18905923 Msa0803640:CDS
TCCTGATTGCAGGGATCATA+AGG 0.421377 5_3:-18905725 None:intergenic
TTTGATCACACGAGATGGTT+GGG 0.422810 5_3:-18908761 None:intergenic
CGATGAACCCTAACCCTAGA+TGG 0.425114 5_3:-18902727 None:intergenic
GAATTTCATATTGTTTAATC+GGG 0.425880 5_3:+18909148 Msa0803640:three_prime_UTR
CACCGCCTCGCTTCCATCTA+GGG 0.431468 5_3:+18902714 Msa0803640:five_prime_UTR
GATGAACATGTGAATATTGT+TGG 0.434057 5_3:+18908849 Msa0803640:three_prime_UTR
TCTAAATGCACACATGGCTT+TGG 0.435149 5_3:+18906259 Msa0803640:CDS
TAGTCTTACTTCCTAAAAGA+AGG 0.436907 5_3:-18907355 None:intergenic
ATTTAGATATTGGAGAAGTT+AGG 0.437362 5_3:-18902764 None:intergenic
GCCTTATGATCCCTGCAATC+AGG 0.440028 5_3:+18905724 Msa0803640:CDS
ACGAAATCAGAGACTCATAT+TGG 0.440224 5_3:+18905404 Msa0803640:CDS
CCAAACAGAATTCTGGTCCT+TGG 0.441566 5_3:-18905135 None:intergenic
TGCGACCAGTGTTACCTCGC+TGG 0.442121 5_3:+18905312 Msa0803640:CDS
AGTGAGAGATTGGGTCTGGC+AGG 0.442429 5_3:-18902662 None:intergenic
GAGAAGTTAGGTTTATGAAA+AGG 0.444693 5_3:-18902752 None:intergenic
TGTGAATATTGTTGGCTCTT+GGG 0.447043 5_3:+18908857 Msa0803640:three_prime_UTR
ATCTGAGAATCTTCATCAAT+AGG 0.449918 5_3:+18902568 Msa0803640:five_prime_UTR
TCCTCAGAATGTTGTTGACT+TGG 0.450948 5_3:+18905517 Msa0803640:CDS
ACTATCATAGTCACCACTAC+TGG 0.457911 5_3:-18906872 None:intergenic
GCGTTTATGATAAAGCTGTT+TGG 0.457999 5_3:+18908989 Msa0803640:three_prime_UTR
TCAGGATAGTGGAGAAAGTC+AGG 0.458623 5_3:+18905742 Msa0803640:CDS
TGCAGTTGTATATGGAAGGT+TGG 0.460207 5_3:+18905991 Msa0803640:CDS
AGTAGTGGTGACTATGATAG+TGG 0.460572 5_3:+18906874 Msa0803640:CDS
ATGTGAATATTGTTGGCTCT+TGG 0.463278 5_3:+18908856 Msa0803640:three_prime_UTR
CAAACAGAATTCTGGTCCTT+GGG 0.470624 5_3:-18905134 None:intergenic
CTCTTGAGAGCTACAATAGT+TGG 0.472193 5_3:+18908611 Msa0803640:CDS
AGCACAGGAAAAGGCATTGA+AGG 0.473023 5_3:-18908305 None:intergenic
CAACGGAAAGGCATCGGATA+GGG 0.473840 5_3:+18905229 Msa0803640:CDS
CAATAGGTTACTTGGAAAAG+AGG 0.478509 5_3:+18902584 Msa0803640:five_prime_UTR
CAGAATCAGCATAAATTTCA+GGG 0.479346 5_3:-18905694 None:intergenic
AGTATGCTTAACTATAACAT+TGG 0.483021 5_3:-18905861 None:intergenic
TCTCGTCAATCCAAGCAATA+GGG 0.485939 5_3:-18905655 None:intergenic
CCTGAGTGAGAGATTGGGTC+TGG 0.488432 5_3:-18902666 None:intergenic
ATGCTAATGTTCGATATGCT+TGG 0.490597 5_3:+18906167 Msa0803640:CDS
AAGGTCTCTTCTGCTGCTGA+AGG 0.492093 5_3:+18906985 Msa0803640:CDS
ATTGCTTGGATTGACGAGAC+AGG 0.495738 5_3:+18905659 Msa0803640:CDS
TAGAAATTAAACCTGGCAAA+AGG 0.497397 5_3:-18906307 None:intergenic
GATAGACCATCAAACGTTCT+GGG 0.497415 5_3:-18905472 None:intergenic
ATCTCACGCGCCAAGTGGGT+GGG 0.500182 5_3:-18902535 None:intergenic
TGGACGCCCAGAACGTTTGA+TGG 0.500372 5_3:+18905466 Msa0803640:CDS
ATACCTCAGGGAATAGCATC+TGG 0.501440 5_3:+18908260 Msa0803640:intron
GAAGCGAGGCGGTGGAGAAA+AGG 0.501669 5_3:-18902705 None:intergenic
GCATCAATAAGCACAGGAAA+AGG 0.503405 5_3:-18908314 None:intergenic
TGGAGTCGATGCTTCCAAGT+TGG 0.503473 5_3:+18905820 Msa0803640:CDS
TATCTCACGCGCCAAGTGGG+TGG 0.504303 5_3:-18902536 None:intergenic
ACTATGATGAAGTGTGGGCT+TGG 0.505685 5_3:+18906217 Msa0803640:CDS
TAAGGTTTGAACTATTGTGC+TGG 0.505767 5_3:-18908959 None:intergenic
TACAGTGATGCAATCACGAT+TGG 0.505775 5_3:+18906099 Msa0803640:CDS
GATCCCTGCAATCAGGATAG+TGG 0.509927 5_3:+18905731 Msa0803640:CDS
AATATGGAGCTTCTCCGTCC+TGG 0.513713 5_3:+18906832 Msa0803640:CDS
AAAGGCATTGAAGGGGATGT+TGG 0.517939 5_3:-18908296 None:intergenic
CCTAGATGGAAGCGAGGCGG+TGG 0.523537 5_3:-18902713 None:intergenic
GCGACCAGTGTTACCTCGCT+GGG 0.532218 5_3:+18905313 Msa0803640:CDS
GAAAAGAATGTACAATATGG+AGG 0.532485 5_3:+18903302 Msa0803640:five_prime_UTR
GGCAAACAACGGAAAGGCAT+CGG 0.532519 5_3:+18905223 Msa0803640:CDS
CTATCATAGTCACCACTACT+GGG 0.534346 5_3:-18906871 None:intergenic
TCGTTATCTCACGCGCCAAG+TGG 0.536195 5_3:-18902540 None:intergenic
CTATCAAAATGGTGAATGGA+AGG 0.536490 5_3:+18905490 Msa0803640:CDS
CTATATAGTATCTTGGATTG+TGG 0.536691 5_3:-18906909 None:intergenic
AAGTTCAAATATAAAAGCTC+AGG 0.539447 5_3:-18905166 None:intergenic
CGTTATCTCACGCGCCAAGT+GGG 0.539641 5_3:-18902539 None:intergenic
TGCATCACTGTACTTGAGAA+GGG 0.539798 5_3:-18906088 None:intergenic
TATATGAATTATAAGAAGAG+TGG 0.542935 5_3:+18905446 Msa0803640:CDS
ATATGAGTCTCTGATTTCGT+CGG 0.544734 5_3:-18905401 None:intergenic
CAACATATTCTGGACAGATG+TGG 0.545442 5_3:-18906954 None:intergenic
ACTGGTCGCAGATCTCCGTT+TGG 0.546119 5_3:-18905299 None:intergenic
ACAACGGAAAGGCATCGGAT+AGG 0.546402 5_3:+18905228 Msa0803640:CDS
TGGTCTATCAAAATGGTGAA+TGG 0.549899 5_3:+18905486 Msa0803640:CDS
GTGAGAGATTGGGTCTGGCA+GGG 0.550447 5_3:-18902661 None:intergenic
AACATATTCTGGACAGATGT+GGG 0.551162 5_3:-18906953 None:intergenic
GGACGAAACTGTCTAGTGCC+AGG 0.552779 5_3:-18906850 None:intergenic
CCACATGCTACATGTCCAAA+CGG 0.553167 5_3:+18905284 Msa0803640:CDS
CAAGTGGGTGGGTTGACTCA+CGG 0.554862 5_3:-18902524 None:intergenic
AACATGGGAAATGGAAATGT+TGG 0.556039 5_3:+18905932 Msa0803640:CDS
TATCTACTATGATGAAGTGT+GGG 0.563052 5_3:+18906212 Msa0803640:CDS
TGGAGGGTAACTGCAGTGCT+TGG 0.563869 5_3:+18903319 Msa0803640:five_prime_UTR
GCACAGGAAAAGGCATTGAA+GGG 0.565819 5_3:-18908304 None:intergenic
CGTGAGTCAACCCACCCACT+TGG 0.566550 5_3:+18902525 Msa0803640:five_prime_UTR
ACGCGCCTGAGTGAGAGATT+GGG 0.567948 5_3:-18902671 None:intergenic
ATTAAACCTGGCAAAAGGAA+AGG 0.568389 5_3:-18906302 None:intergenic
AATAGTTGGCCTTCAAAGCA+AGG 0.570840 5_3:+18908625 Msa0803640:CDS
CTGAGAGCATCAATAAGCAC+AGG 0.571313 5_3:-18908320 None:intergenic
TATTGATGCTCTCAGAAACA+AGG 0.572331 5_3:+18908328 Msa0803640:CDS
TGAAGATAGTAGCAATAACA+TGG 0.572879 5_3:+18905916 Msa0803640:CDS
CAGAAACAAGGTTTCTGCGA+AGG 0.572993 5_3:+18908340 Msa0803640:CDS
GTAGTGCAGTTGTATATGGA+AGG 0.578361 5_3:+18905987 Msa0803640:CDS
ACCAAGTCAACAACATTCTG+AGG 0.581281 5_3:-18905518 None:intergenic
TTGCTTGGATTGACGAGACA+GGG 0.581940 5_3:+18905660 Msa0803640:CDS
GAGTCGATGCTTCCAAGTTG+GGG 0.583392 5_3:+18905822 Msa0803640:CDS
TTGCATCACTGTACTTGAGA+AGG 0.584101 5_3:-18906089 None:intergenic
AAGTGTGGGCTTGGTCATTG+TGG 0.585698 5_3:+18906226 Msa0803640:CDS
ATCCATGAATAAAATTCCCA+TGG 0.586318 5_3:+18902785 Msa0803640:five_prime_UTR
CCATATTCCCCATTATTACA+CGG 0.586757 5_3:-18906816 None:intergenic
TCTCCACTATCCTGATTGCA+GGG 0.589306 5_3:-18905734 None:intergenic
ATCACACGAGATGGTTGGGA+GGG 0.590498 5_3:-18908757 None:intergenic
AAACTGTGCTGGTGAGGGTG+AGG 0.591437 5_3:-18905100 None:intergenic
TCAAACAAACTGTGCTGGTG+AGG 0.594201 5_3:-18905106 None:intergenic
CCAGACCCAATCTCTCACTC+AGG 0.595104 5_3:+18902666 Msa0803640:five_prime_UTR
TGATCTTATCCGTCTTAATG+TGG 0.595394 5_3:+18908810 Msa0803640:three_prime_UTR
AAAAGAATGTACAATATGGA+GGG 0.598654 5_3:+18903303 Msa0803640:five_prime_UTR
AAGTTTCAAACAAACTGTGC+TGG 0.601374 5_3:-18905111 None:intergenic
TATGCATTATCTGCAATTCA+GGG 0.603277 5_3:+18908379 Msa0803640:CDS
GATGCCCAGCGAGGTAACAC+TGG 0.607233 5_3:-18905317 None:intergenic
AGACAGTTTCGTCCCAGTAG+TGG 0.612844 5_3:+18906859 Msa0803640:CDS
ATAGCATCTGGTTCGCGTAG+AGG 0.613583 5_3:+18908272 Msa0803640:CDS
CAGAGTGTTCCACATTAAGA+CGG 0.614713 5_3:-18908819 None:intergenic
GTAGTGGTGACTATGATAGT+GGG 0.614725 5_3:+18906875 Msa0803640:CDS
TCTACATCTAAATGCACACA+TGG 0.616416 5_3:+18906253 Msa0803640:CDS
CCGTTTGGACATGTAGCATG+TGG 0.622892 5_3:-18905284 None:intergenic
TCATCTCCCAATACTTAACA+AGG 0.623898 5_3:-18908790 None:intergenic
GGGTTGTGCTTAATCTGAAG+CGG 0.628518 5_3:+18905249 Msa0803640:CDS
GCTATCGAAGTAGCAAACAA+TGG 0.630365 5_3:-18909121 None:intergenic
GATCACACGAGATGGTTGGG+AGG 0.630443 5_3:-18908758 None:intergenic
AGTTTGTTTGAAACTTCCCA+AGG 0.632571 5_3:+18905118 Msa0803640:five_prime_UTR
GGTCAAAATTTGAGACCAAG+AGG 0.634301 5_3:+18902806 Msa0803640:five_prime_UTR
GAAACTGTCTAGTGCCAGGA+CGG 0.638018 5_3:-18906846 None:intergenic
TTGTGATATTGACGAAAATG+GGG 0.640860 5_3:+18906774 Msa0803640:CDS
GCATCACTGTACTTGAGAAG+GGG 0.643866 5_3:-18906087 None:intergenic
CTATCTACTATGATGAAGTG+TGG 0.646279 5_3:+18906211 Msa0803640:CDS
AATCAGAGACTCATATTGGA+CGG 0.648143 5_3:+18905408 Msa0803640:CDS
GAAGATAGTAGCAATAACAT+GGG 0.651958 5_3:+18905917 Msa0803640:CDS
CAAACAAACTGTGCTGGTGA+GGG 0.655112 5_3:-18905105 None:intergenic
CATGGAGGCAAACAACGGAA+AGG 0.657589 5_3:+18905217 Msa0803640:exon
CACAGGAAAAGGCATTGAAG+GGG 0.658134 5_3:-18908303 None:intergenic
ACTGTGGAGGTAGAGTTACA+TGG 0.660219 5_3:+18905569 Msa0803640:CDS
TGCGAAGAAAGCAACTGTGG+AGG 0.668909 5_3:+18905556 Msa0803640:CDS
AGTCGATGCTTCCAAGTTGG+GGG 0.670164 5_3:+18905823 Msa0803640:CDS
AACCCTAGATGGAAGCGAGG+CGG 0.670501 5_3:-18902716 None:intergenic
TAATGCGAAGAAAGCAACTG+TGG 0.675973 5_3:+18905553 Msa0803640:CDS
CCTAACCCTAGATGGAAGCG+AGG 0.679125 5_3:-18902719 None:intergenic
ACAGTGTGAACGAACACGCA+CGG 0.680983 5_3:+18902610 Msa0803640:five_prime_UTR
ATAAACATGGAGGCAAACAA+CGG 0.683583 5_3:+18905212 Msa0803640:exon
ATTGATCTAGTAGATAAACA+TGG 0.692401 5_3:+18905199 Msa0803640:exon
TGGTGACTATGATAGTGGGG+TGG 0.700703 5_3:+18906879 Msa0803640:CDS
TAGTGGTGACTATGATAGTG+GGG 0.714306 5_3:+18906876 Msa0803640:CDS
GATCTAGTAGATAAACATGG+AGG 0.729895 5_3:+18905202 Msa0803640:exon
GATACAAGTGATGCCCAGCG+AGG 0.747737 5_3:-18905326 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAAGTTTTAAATTTATAT+TGG + chr5_3:18903984-18904003 Msa0803640:intron 10.0%
!! AAATGTAATTTAATATCATT+AGG - chr5_3:18905785-18905804 None:intergenic 10.0%
!! AACTTAATATATATGAAAAA+AGG - chr5_3:18907549-18907568 None:intergenic 10.0%
!!! TAAATTTATATTGGAGTTTT+TGG + chr5_3:18903993-18904012 Msa0803640:intron 15.0%
!! AATTAAAAAAATTGGGAATA+TGG - chr5_3:18905045-18905064 None:intergenic 15.0%
!! CATTTAGAAATTGAAATAAA+TGG + chr5_3:18905800-18905819 Msa0803640:CDS 15.0%
!!! TATATTTTTATTTTGCTCAA+CGG - chr5_3:18905963-18905982 None:intergenic 15.0%
!! TTTACACAAGTATTTATTTA+AGG + chr5_3:18906421-18906440 Msa0803640:intron 15.0%
!!! TTTTTATTATTCTGTTGTAA+TGG + chr5_3:18906709-18906728 Msa0803640:intron 15.0%
!!! AAGACTAAGAATAATATTTT+TGG + chr5_3:18907371-18907390 Msa0803640:CDS 15.0%
!!! AGACTAAGAATAATATTTTT+GGG + chr5_3:18907372-18907391 Msa0803640:CDS 15.0%
!!! GGAATTGATAATTTAATAAA+AGG + chr5_3:18907675-18907694 Msa0803640:intron 15.0%
!! AGGAAAAAAATTATTTAGAT+GGG + chr5_3:18907799-18907818 Msa0803640:intron 15.0%
!!! ATTTTAATAAAATTCTGAGA+AGG + chr5_3:18907983-18908002 Msa0803640:intron 15.0%
!! AGAATTTCATATTGTTTAAT+CGG + chr5_3:18909147-18909166 Msa0803640:three_prime_UTR 15.0%
!! TTATTCATGGATTTAGATAT+TGG - chr5_3:18902777-18902796 None:intergenic 20.0%
!!! ATATGCTTTTAGTTAATTGT+GGG + chr5_3:18903360-18903379 Msa0803640:intron 20.0%
!! TATGTTAAGATCTATCTTAT+TGG + chr5_3:18903794-18903813 Msa0803640:intron 20.0%
!!! TCATTTTGCTTATTCATTTT+TGG + chr5_3:18904080-18904099 Msa0803640:intron 20.0%
!!! ATATTTTGTTTTTGCATTGT+CGG + chr5_3:18904259-18904278 Msa0803640:intron 20.0%
!! ATAAGGTCTATAAACTTTAA+AGG + chr5_3:18904322-18904341 Msa0803640:intron 20.0%
!! CTTTATTCTTATTAATCAGT+AGG - chr5_3:18904781-18904800 None:intergenic 20.0%
!! AATTAAATCTCTTATCTTCT+TGG + chr5_3:18904875-18904894 Msa0803640:intron 20.0%
!! CCTGGATAATTAAAAAAATT+GGG - chr5_3:18905052-18905071 None:intergenic 20.0%
!!! CCAATTTTTTTAATTATCCA+GGG + chr5_3:18905050-18905069 Msa0803640:intron 20.0%
!! TATATGAATTATAAGAAGAG+TGG + chr5_3:18905446-18905465 Msa0803640:CDS 20.0%
!! ATTTAATATCATTAGGATCT+TGG - chr5_3:18905778-18905797 None:intergenic 20.0%
!! GAGCAAAATAAAAATATAGT+TGG + chr5_3:18905965-18905984 Msa0803640:CDS 20.0%
!!! AATTCAATAGTTTTTTCCTT+TGG + chr5_3:18906396-18906415 Msa0803640:intron 20.0%
!!! AGTATTATAGAACATTTTCA+AGG - chr5_3:18906530-18906549 None:intergenic 20.0%
!! AGACATTGATGTATAAATAT+GGG - chr5_3:18906640-18906659 None:intergenic 20.0%
!! AAGACATTGATGTATAAATA+TGG - chr5_3:18906641-18906660 None:intergenic 20.0%
!! AGAAGACATAAAAGAAATAA+AGG - chr5_3:18907023-18907042 None:intergenic 20.0%
!!! AAAGGATCTTATTTTTTGTT+AGG - chr5_3:18907061-18907080 None:intergenic 20.0%
!! TATTATAAACGAAAATGGAA+AGG - chr5_3:18907079-18907098 None:intergenic 20.0%
!!! TCCATTTTCGTTTATAATAT+TGG + chr5_3:18907080-18907099 Msa0803640:intron 20.0%
!! ACCAATATTATAAACGAAAA+TGG - chr5_3:18907084-18907103 None:intergenic 20.0%
!!! TAACTTGTTGATATATGATT+CGG + chr5_3:18907126-18907145 Msa0803640:intron 20.0%
!!! GATATATAATGCATTTTTAC+AGG + chr5_3:18907332-18907351 Msa0803640:intron 20.0%
!!! GACTAAGAATAATATTTTTG+GGG + chr5_3:18907373-18907392 Msa0803640:CDS 20.0%
!! TATATATGAAAAAAGGAAAG+TGG - chr5_3:18907542-18907561 None:intergenic 20.0%
!! ATATAAAAGATGAAACACAT+TGG - chr5_3:18907615-18907634 None:intergenic 20.0%
!! GAGGAAAAAAATTATTTAGA+TGG + chr5_3:18907798-18907817 Msa0803640:intron 20.0%
!!! TATAAATTGTCATTGTTTTC+TGG + chr5_3:18908461-18908480 Msa0803640:intron 20.0%
!!! TATAAATTGTCATTGTTTTC+TGG + chr5_3:18908461-18908480 Msa0803640:intron 20.0%
!! ATAGTTCAAACCTTAAAATT+AGG + chr5_3:18908967-18908986 Msa0803640:three_prime_UTR 20.0%
!! GAATTTCATATTGTTTAATC+GGG + chr5_3:18909148-18909167 Msa0803640:three_prime_UTR 20.0%
! ATTTAGATATTGGAGAAGTT+AGG - chr5_3:18902767-18902786 None:intergenic 25.0%
! AATTCAATTCAATTACCTCT+TGG - chr5_3:18902824-18902843 None:intergenic 25.0%
!!! CATGATTTTCAGTTTTGATT+TGG + chr5_3:18902850-18902869 Msa0803640:intron 25.0%
!! TTTAAGCTTAATTTTGTTGC+TGG + chr5_3:18903052-18903071 Msa0803640:intron 25.0%
!!! ATCTTTTTGATTTTGTGATC+AGG + chr5_3:18903262-18903281 Msa0803640:intron 25.0%
! AAAAGAATGTACAATATGGA+GGG + chr5_3:18903303-18903322 Msa0803640:five_prime_UTR 25.0%
!!! GATATGCTTTTAGTTAATTG+TGG + chr5_3:18903359-18903378 Msa0803640:intron 25.0%
!!! ATCTCTTGTTGTTTTTAGTT+TGG + chr5_3:18903409-18903428 Msa0803640:intron 25.0%
! TATCCACAATCCATAAAAAA+GGG - chr5_3:18903507-18903526 None:intergenic 25.0%
!! CTTTTATGAAAGTCAACAAA+CGG - chr5_3:18903659-18903678 None:intergenic 25.0%
!! TACTGCTGTATTTACATTTT+TGG + chr5_3:18904142-18904161 Msa0803640:intron 25.0%
! TCTAGAAATTAAACATCTGA+TGG - chr5_3:18904213-18904232 None:intergenic 25.0%
!! TCAGATGTTTAATTTCTAGA+AGG + chr5_3:18904213-18904232 Msa0803640:intron 25.0%
!! CAGATGTTTAATTTCTAGAA+GGG + chr5_3:18904214-18904233 Msa0803640:intron 25.0%
! AGTTTATAGACCTTATGATA+AGG - chr5_3:18904318-18904337 None:intergenic 25.0%
!!! TAAACTTTAAAGGCTTTGTT+TGG + chr5_3:18904332-18904351 Msa0803640:intron 25.0%
! GATGCTATACTATTAATCTA+TGG + chr5_3:18904833-18904852 Msa0803640:intron 25.0%
!!! CCCAATTTTTTTAATTATCC+AGG + chr5_3:18905049-18905068 Msa0803640:intron 25.0%
! CCCTGGATAATTAAAAAAAT+TGG - chr5_3:18905053-18905072 None:intergenic 25.0%
! AAGTTCAAATATAAAAGCTC+AGG - chr5_3:18905169-18905188 None:intergenic 25.0%
! ATTGATCTAGTAGATAAACA+TGG + chr5_3:18905199-18905218 Msa0803640:exon 25.0%
!! TATCAGATGAATTTGAAATC+TGG + chr5_3:18905623-18905642 Msa0803640:CDS 25.0%
! AGTATGCTTAACTATAACAT+TGG - chr5_3:18905864-18905883 None:intergenic 25.0%
! AAATTACGAAAAATTGTCGT+GGG + chr5_3:18906143-18906162 Msa0803640:CDS 25.0%
! TGATGATTAGAAATTAAACC+TGG - chr5_3:18906317-18906336 None:intergenic 25.0%
! AATACTTGTGTAAAAACCAA+AGG - chr5_3:18906415-18906434 None:intergenic 25.0%
! CACAAGTATTTATTTAAGGA+TGG + chr5_3:18906425-18906444 Msa0803640:intron 25.0%
! ACAATTGACAATAATAGAAG+TGG - chr5_3:18906494-18906513 None:intergenic 25.0%
! ATGTATAAATATGGGGAAAA+AGG - chr5_3:18906632-18906651 None:intergenic 25.0%
! GACATTGATGTATAAATATG+GGG - chr5_3:18906639-18906658 None:intergenic 25.0%
! ATTGTGATATTGACGAAAAT+GGG + chr5_3:18906773-18906792 Msa0803640:CDS 25.0%
! ATCCAAGATACTATATAGTA+TGG + chr5_3:18906914-18906933 Msa0803640:CDS 25.0%
! TTCCATACTATATAGTATCT+TGG - chr5_3:18906919-18906938 None:intergenic 25.0%
! TTGAAACTAACAACATATTC+TGG - chr5_3:18906967-18906986 None:intergenic 25.0%
!! AGAATATGTTGTTAGTTTCA+AGG + chr5_3:18906966-18906985 Msa0803640:CDS 25.0%
!!! TGCTTTTTACAAAGGAAATT+TGG - chr5_3:18907497-18907516 None:intergenic 25.0%
!!! AAATGCATTGCTTTTTACAA+AGG - chr5_3:18907505-18907524 None:intergenic 25.0%
! TTATCAATTCCTCTATATTC+TGG - chr5_3:18907666-18907685 None:intergenic 25.0%
! AAAAATTATTTAGATGGGAC+AGG + chr5_3:18907804-18907823 Msa0803640:intron 25.0%
!! TTTTACTATCTAAGCAATCT+AGG + chr5_3:18908057-18908076 Msa0803640:intron 25.0%
!! TCGAATCAATTTTTGAATTC+TGG + chr5_3:18908236-18908255 Msa0803640:intron 25.0%
!! CGAATCAATTTTTGAATTCT+GGG + chr5_3:18908237-18908256 Msa0803640:intron 25.0%
!! TTTAAACAATTAGGAGGTAT+AGG - chr5_3:18908721-18908740 None:intergenic 25.0%
! ATACCTCCTAATTGTTTAAA+CGG + chr5_3:18908721-18908740 Msa0803640:intron 25.0%
! AAGAAACCGTTTAAACAATT+AGG - chr5_3:18908730-18908749 None:intergenic 25.0%
!! ATCATAAACGCCTAATTTTA+AGG - chr5_3:18908980-18908999 None:intergenic 25.0%
!! TGGATATTCCATATTGTTTT+TGG + chr5_3:18909009-18909028 Msa0803640:three_prime_UTR 25.0%
!! TTTTTCTATCCAACAATCTA+CGG - chr5_3:18909062-18909081 None:intergenic 25.0%
ATTGATGAAGATTCTCAGAT+TGG - chr5_3:18902568-18902587 None:intergenic 30.0%
ATCTGAGAATCTTCATCAAT+AGG + chr5_3:18902568-18902587 Msa0803640:five_prime_UTR 30.0%
ATCTTCATCAATAGGTTACT+TGG + chr5_3:18902576-18902595 Msa0803640:five_prime_UTR 30.0%
GAGAAGTTAGGTTTATGAAA+AGG - chr5_3:18902755-18902774 None:intergenic 30.0%
ATCCATGAATAAAATTCCCA+TGG + chr5_3:18902785-18902804 Msa0803640:five_prime_UTR 30.0%
!! GTGTATGTTGTTGACTTTAT+CGG + chr5_3:18902947-18902966 Msa0803640:intron 30.0%
!! CATGCAAAGATTCATTTTTC+AGG - chr5_3:18903189-18903208 None:intergenic 30.0%
! GATTTTGTGATCAGGATTAT+AGG + chr5_3:18903270-18903289 Msa0803640:intron 30.0%
GGAGAAAAGAATGTACAATA+TGG + chr5_3:18903299-18903318 Msa0803640:five_prime_UTR 30.0%
GAAAAGAATGTACAATATGG+AGG + chr5_3:18903302-18903321 Msa0803640:five_prime_UTR 30.0%
ATTGTGGGAGTTCTTAATTT+CGG + chr5_3:18903375-18903394 Msa0803640:intron 30.0%
! GGTTGTTATGTTTTACTCTT+TGG + chr5_3:18903430-18903449 Msa0803640:intron 30.0%
GTATCCACAATCCATAAAAA+AGG - chr5_3:18903508-18903527 None:intergenic 30.0%
! GGATACTTCTATGATGTTTT+TGG + chr5_3:18903522-18903541 Msa0803640:intron 30.0%
! TATGGCTATTGGTTAAACTA+AGG + chr5_3:18903577-18903596 Msa0803640:intron 30.0%
ATGTAAGTAAATGTTGACCA+CGG + chr5_3:18903950-18903969 Msa0803640:intron 30.0%
AATCTGTCTACAAGATTGTT+AGG + chr5_3:18904054-18904073 Msa0803640:intron 30.0%
CTATCTACTATCCAATTACA+GGG - chr5_3:18904182-18904201 None:intergenic 30.0%
ACTATCTACTATCCAATTAC+AGG - chr5_3:18904183-18904202 None:intergenic 30.0%
AACCTAGAGCAATTTATTCA+GGG - chr5_3:18904655-18904674 None:intergenic 30.0%
! ATCAGTAGGAGTATATTGTA+AGG - chr5_3:18904767-18904786 None:intergenic 30.0%
GAATACTTTAATTAGTCGTC+TGG - chr5_3:18904813-18904832 None:intergenic 30.0%
! ATCTATGGACTAAGTATTCT+TGG + chr5_3:18904848-18904867 Msa0803640:intron 30.0%
!!! GTGTTTTTTAGAATTTCACC+TGG + chr5_3:18904903-18904922 Msa0803640:intron 30.0%
GGAATATGGAACTAATGAAT+AGG - chr5_3:18905031-18905050 None:intergenic 30.0%
AGCATGACATCAAGAATATT+TGG - chr5_3:18905080-18905099 None:intergenic 30.0%
AAAAATTCAGCACAAGATGA+TGG - chr5_3:18905595-18905614 None:intergenic 30.0%
CAGAATCAGCATAAATTTCA+GGG - chr5_3:18905697-18905716 None:intergenic 30.0%
TCAGAATCAGCATAAATTTC+AGG - chr5_3:18905698-18905717 None:intergenic 30.0%
TGAAGATAGTAGCAATAACA+TGG + chr5_3:18905916-18905935 Msa0803640:CDS 30.0%
GAAGATAGTAGCAATAACAT+GGG + chr5_3:18905917-18905936 Msa0803640:CDS 30.0%
TGTACAGAAGATGTTTCTTA+AGG + chr5_3:18906024-18906043 Msa0803640:CDS 30.0%
GTACAGAAGATGTTTCTTAA+GGG + chr5_3:18906025-18906044 Msa0803640:CDS 30.0%
GAAATTACGAAAAATTGTCG+TGG + chr5_3:18906142-18906161 Msa0803640:CDS 30.0%
AATTACGAAAAATTGTCGTG+GGG + chr5_3:18906144-18906163 Msa0803640:CDS 30.0%
TATCTACTATGATGAAGTGT+GGG + chr5_3:18906212-18906231 Msa0803640:CDS 30.0%
TAGAAATTAAACCTGGCAAA+AGG - chr5_3:18906310-18906329 None:intergenic 30.0%
TCTACTAATATATCTCTGCA+TGG + chr5_3:18906451-18906470 Msa0803640:intron 30.0%
! TTCTGTTGTAATGGAAAGAA+AGG + chr5_3:18906718-18906737 Msa0803640:intron 30.0%
! TCTGTTGTAATGGAAAGAAA+GGG + chr5_3:18906719-18906738 Msa0803640:intron 30.0%
CATTGTGATATTGACGAAAA+TGG + chr5_3:18906772-18906791 Msa0803640:CDS 30.0%
TTGTGATATTGACGAAAATG+GGG + chr5_3:18906774-18906793 Msa0803640:CDS 30.0%
CTATATAGTATCTTGGATTG+TGG - chr5_3:18906912-18906931 None:intergenic 30.0%
AAGTGATCTGTCAAATATGA+AGG - chr5_3:18907222-18907241 None:intergenic 30.0%
AAACAAGTTTCCAAAAGGAA+GGG - chr5_3:18907298-18907317 None:intergenic 30.0%
GAAAGAAACAAGTTTCCAAA+AGG - chr5_3:18907303-18907322 None:intergenic 30.0%
! ATTTTTACAGGCCTTCTTTT+AGG + chr5_3:18907344-18907363 Msa0803640:intron 30.0%
! TAGTCTTACTTCCTAAAAGA+AGG - chr5_3:18907358-18907377 None:intergenic 30.0%
TTACAAAGGAAATTTGGCAT+CGG - chr5_3:18907491-18907510 None:intergenic 30.0%
! CATTGGCTATCTTAATATCA+AGG - chr5_3:18907598-18907617 None:intergenic 30.0%
GGATAAATTCCAGAATATAG+AGG + chr5_3:18907654-18907673 Msa0803640:intron 30.0%
TAGATATGCAGGCATAATTA+GGG + chr5_3:18907770-18907789 Msa0803640:intron 30.0%
TATAGATTTCTGACTCATCA+TGG + chr5_3:18908012-18908031 Msa0803640:intron 30.0%
ATATGCATTATCTGCAATTC+AGG + chr5_3:18908378-18908397 Msa0803640:CDS 30.0%
TATGCATTATCTGCAATTCA+GGG + chr5_3:18908379-18908398 Msa0803640:CDS 30.0%
GATATCAATTAAGACAGAGA+CGG - chr5_3:18908436-18908455 None:intergenic 30.0%
!! ATTGTTTTCTGGTAATTACC+AGG + chr5_3:18908472-18908491 Msa0803640:intron 30.0%
!! ATTGTTTTCTGGTAATTACC+AGG + chr5_3:18908472-18908491 Msa0803640:intron 30.0%
!!! AAGGCTTTAACTTTTTTGCA+TGG + chr5_3:18908659-18908678 Msa0803640:intron 30.0%
!!! AGGCTTTAACTTTTTTGCAT+GGG + chr5_3:18908660-18908679 Msa0803640:intron 30.0%
AAACCGTTTAAACAATTAGG+AGG - chr5_3:18908727-18908746 None:intergenic 30.0%
AATGGAACCTTGTTAAGTAT+TGG + chr5_3:18908783-18908802 Msa0803640:exon 30.0%
ATGGAACCTTGTTAAGTATT+GGG + chr5_3:18908784-18908803 Msa0803640:exon 30.0%
GATGAACATGTGAATATTGT+TGG + chr5_3:18908849-18908868 Msa0803640:three_prime_UTR 30.0%
CTCAAGTACCAAAAACAATA+TGG - chr5_3:18909020-18909039 None:intergenic 30.0%
CAATAGGTTACTTGGAAAAG+AGG + chr5_3:18902584-18902603 Msa0803640:five_prime_UTR 35.0%
! GACCATGGGAATTTTATTCA+TGG - chr5_3:18902790-18902809 None:intergenic 35.0%
!! TGGTCTCAAATTTTGACCAT+GGG - chr5_3:18902804-18902823 None:intergenic 35.0%
!! TTGGTCTCAAATTTTGACCA+TGG - chr5_3:18902805-18902824 None:intergenic 35.0%
! GAGCTTGGAATTTTCTAGAT+CGG + chr5_3:18902973-18902992 Msa0803640:intron 35.0%
! CCTCTATTGATCTGTTGATT+CGG + chr5_3:18903100-18903119 Msa0803640:intron 35.0%
! GATCAGGATTATAGGTGTTT+TGG + chr5_3:18903278-18903297 Msa0803640:intron 35.0%
! GTGCTTGGTATGCATAATTT+TGG + chr5_3:18903334-18903353 Msa0803640:intron 35.0%
!!! TGCTATACTGCCCTTTTTTA+TGG + chr5_3:18903494-18903513 Msa0803640:intron 35.0%
ATCCTCAAGACTGTCTTATA+TGG + chr5_3:18903559-18903578 Msa0803640:intron 35.0%
AGACTGTCTTATATGGCTAT+TGG + chr5_3:18903566-18903585 Msa0803640:intron 35.0%
! GCTATTGGTTAAACTAAGGA+TGG + chr5_3:18903581-18903600 Msa0803640:intron 35.0%
AATCGAATTGTCCCTGTAAT+TGG + chr5_3:18904168-18904187 Msa0803640:intron 35.0%
GTCACAAGCTACTATTCAAA+CGG - chr5_3:18904296-18904315 None:intergenic 35.0%
! TAGCTTGTGACCTTATCATA+AGG + chr5_3:18904305-18904324 Msa0803640:intron 35.0%
!! AAAGGCTTTGTTTGGAAGTT+AGG + chr5_3:18904340-18904359 Msa0803640:intron 35.0%
TGATCTCACAAAATACACGT+TGG - chr5_3:18904501-18904520 None:intergenic 35.0%
! TTTTGTGAGATCACTATGCA+AGG + chr5_3:18904508-18904527 Msa0803640:intron 35.0%
!! TTAACCTTTGGGCTTTGTTT+GGG - chr5_3:18904607-18904626 None:intergenic 35.0%
!! TTTAACCTTTGGGCTTTGTT+TGG - chr5_3:18904608-18904627 None:intergenic 35.0%
AACAAAGCCCAAAGGTTAAA+TGG + chr5_3:18904608-18904627 Msa0803640:intron 35.0%
ACAAAGCCCAAAGGTTAAAT+GGG + chr5_3:18904609-18904628 Msa0803640:intron 35.0%
AACCCTGAATAAATTGCTCT+AGG + chr5_3:18904650-18904669 Msa0803640:intron 35.0%
GAACCTAGAGCAATTTATTC+AGG - chr5_3:18904656-18904675 None:intergenic 35.0%
CACATGCTTTCTTAAGTTTC+AGG - chr5_3:18904737-18904756 None:intergenic 35.0%
ATCTCTTATCTTCTTGGAGA+TGG + chr5_3:18904881-18904900 Msa0803640:intron 35.0%
AAGTTTCAAACAAACTGTGC+TGG - chr5_3:18905114-18905133 None:intergenic 35.0%
! AGTTTGTTTGAAACTTCCCA+AGG + chr5_3:18905118-18905137 Msa0803640:five_prime_UTR 35.0%
GATCTAGTAGATAAACATGG+AGG + chr5_3:18905202-18905221 Msa0803640:exon 35.0%
ATAAACATGGAGGCAAACAA+CGG + chr5_3:18905212-18905231 Msa0803640:exon 35.0%
TGTTTGACAACTTCGTTTCT+TGG - chr5_3:18905353-18905372 None:intergenic 35.0%
ATATGAGTCTCTGATTTCGT+CGG - chr5_3:18905404-18905423 None:intergenic 35.0%
ACGAAATCAGAGACTCATAT+TGG + chr5_3:18905404-18905423 Msa0803640:CDS 35.0%
AATCAGAGACTCATATTGGA+CGG + chr5_3:18905408-18905427 Msa0803640:CDS 35.0%
! CGTTTGATGGTCTATCAAAA+TGG + chr5_3:18905479-18905498 Msa0803640:CDS 35.0%
TGGTCTATCAAAATGGTGAA+TGG + chr5_3:18905486-18905505 Msa0803640:CDS 35.0%
CTATCAAAATGGTGAATGGA+AGG + chr5_3:18905490-18905509 Msa0803640:CDS 35.0%
!! AGAATGTTGTTGACTTGGTT+AGG + chr5_3:18905522-18905541 Msa0803640:CDS 35.0%
AGTAGCAATAACATGGGAAA+TGG + chr5_3:18905923-18905942 Msa0803640:CDS 35.0%
AACATGGGAAATGGAAATGT+TGG + chr5_3:18905932-18905951 Msa0803640:CDS 35.0%
TGTATATGGAAGGTTGGATT+TGG + chr5_3:18905997-18906016 Msa0803640:CDS 35.0%
! CTTAAGGGAACTAGTAGTTT+TGG + chr5_3:18906040-18906059 Msa0803640:CDS 35.0%
ATGCTAATGTTCGATATGCT+TGG + chr5_3:18906167-18906186 Msa0803640:CDS 35.0%
CTATCTACTATGATGAAGTG+TGG + chr5_3:18906211-18906230 Msa0803640:CDS 35.0%
TCTACATCTAAATGCACACA+TGG + chr5_3:18906253-18906272 Msa0803640:CDS 35.0%
ATTAAACCTGGCAAAAGGAA+AGG - chr5_3:18906305-18906324 None:intergenic 35.0%
! GAAAGAAAGGGATTCAAGTT+TGG + chr5_3:18906731-18906750 Msa0803640:intron 35.0%
! GTCTTTTGCCGTGTAATAAT+GGG + chr5_3:18906808-18906827 Msa0803640:CDS 35.0%
! TCTTTTGCCGTGTAATAATG+GGG + chr5_3:18906809-18906828 Msa0803640:CDS 35.0%
CCATATTCCCCATTATTACA+CGG - chr5_3:18906819-18906838 None:intergenic 35.0%
AACATATTCTGGACAGATGT+GGG - chr5_3:18906956-18906975 None:intergenic 35.0%
GTACTTGATGAGTTAATCAG+AGG + chr5_3:18907102-18907121 Msa0803640:intron 35.0%
!! ATGATTCGGTTCATTCCATT+TGG + chr5_3:18907140-18907159 Msa0803640:intron 35.0%
AAGGAGAAATCAACATGCTA+GGG - chr5_3:18907180-18907199 None:intergenic 35.0%
GAAACAAGTTTCCAAAAGGA+AGG - chr5_3:18907299-18907318 None:intergenic 35.0%
!!! GTGACAAGATTTTAGGACTT+CGG - chr5_3:18907412-18907431 None:intergenic 35.0%
! TCTGAACGTGACAAGATTTT+AGG - chr5_3:18907419-18907438 None:intergenic 35.0%
ATAAGTAGCAAGTCTTCAGA+AGG + chr5_3:18907633-18907652 Msa0803640:intron 35.0%
!! CAGATAAGTTCTAGATATGC+AGG + chr5_3:18907759-18907778 Msa0803640:intron 35.0%
CTAGATATGCAGGCATAATT+AGG + chr5_3:18907769-18907788 Msa0803640:intron 35.0%
! CTTTTATCAATGCAGTCACT+TGG - chr5_3:18907845-18907864 None:intergenic 35.0%
! CAAGTGACTGCATTGATAAA+AGG + chr5_3:18907843-18907862 Msa0803640:intron 35.0%
! GACTGCATTGATAAAAGGAA+TGG + chr5_3:18907848-18907867 Msa0803640:intron 35.0%
! TGCATTGATAAAAGGAATGG+TGG + chr5_3:18907851-18907870 Msa0803640:intron 35.0%
TAAGCAATCTAGGTTTCAGT+CGG + chr5_3:18908067-18908086 Msa0803640:intron 35.0%
TATTGATGCTCTCAGAAACA+AGG + chr5_3:18908328-18908347 Msa0803640:CDS 35.0%
!! TAGTGTAAAACTAGCTTTGC+TGG + chr5_3:18908406-18908425 Msa0803640:intron 35.0%
! ATGATTTTGCGAAGAAGTTG+AGG + chr5_3:18908567-18908586 Msa0803640:CDS 35.0%
!! AGAAAAGTACCTTGCTTTGA+AGG - chr5_3:18908637-18908656 None:intergenic 35.0%
!! AAGCAAGGTACTTTTCTCAA+AGG + chr5_3:18908640-18908659 Msa0803640:intron 35.0%
TGAATGGTTTATCTGCTACA+TGG + chr5_3:18908690-18908709 Msa0803640:intron 35.0%
TCATCTCCCAATACTTAACA+AGG - chr5_3:18908793-18908812 None:intergenic 35.0%
TGATCTTATCCGTCTTAATG+TGG + chr5_3:18908810-18908829 Msa0803640:three_prime_UTR 35.0%
!! ATGTGAATATTGTTGGCTCT+TGG + chr5_3:18908856-18908875 Msa0803640:three_prime_UTR 35.0%
!! TGTGAATATTGTTGGCTCTT+GGG + chr5_3:18908857-18908876 Msa0803640:three_prime_UTR 35.0%
TAAGGTTTGAACTATTGTGC+TGG - chr5_3:18908962-18908981 None:intergenic 35.0%
GCGTTTATGATAAAGCTGTT+TGG + chr5_3:18908989-18909008 Msa0803640:three_prime_UTR 35.0%
! GGTCAAAATTTGAGACCAAG+AGG + chr5_3:18902806-18902825 Msa0803640:five_prime_UTR 40.0%
!! TGACTTTATCGGTTTGAGCT+TGG + chr5_3:18902958-18902977 Msa0803640:intron 40.0%
CCGAATCAACAGATCAATAG+AGG - chr5_3:18903103-18903122 None:intergenic 40.0%
!! CTATTGATCTGTTGATTCGG+TGG + chr5_3:18903103-18903122 Msa0803640:intron 40.0%
!! TGTTGATTCGGTGGTAGATT+AGG + chr5_3:18903112-18903131 Msa0803640:intron 40.0%
!! GTTGATTCGGTGGTAGATTA+GGG + chr5_3:18903113-18903132 Msa0803640:intron 40.0%
!!! CTGCCCTTTTTTATGGATTG+TGG + chr5_3:18903501-18903520 Msa0803640:intron 40.0%
AGCCATATAAGACAGTCTTG+AGG - chr5_3:18903564-18903583 None:intergenic 40.0%
! AGATCAAAGAGAGCGCAAAA+AGG - chr5_3:18903850-18903869 None:intergenic 40.0%
CTTGTTGCTATGTAATTCCG+TGG - chr5_3:18903970-18903989 None:intergenic 40.0%
!! GCTTTGTTTGGAAGTTAGGA+GGG + chr5_3:18904344-18904363 Msa0803640:intron 40.0%
! AGTGGAATCCATCAACCTTT+TGG + chr5_3:18904383-18904402 Msa0803640:intron 40.0%
! GTGGAATCCATCAACCTTTT+GGG + chr5_3:18904384-18904403 Msa0803640:intron 40.0%
! TGGAATCCATCAACCTTTTG+GGG + chr5_3:18904385-18904404 Msa0803640:intron 40.0%
CTCACAAAATACACGTTGGA+AGG - chr5_3:18904497-18904516 None:intergenic 40.0%
CAAAGCCCAAAGGTTAAATG+GGG + chr5_3:18904610-18904629 Msa0803640:intron 40.0%
TTAAGTTTCAGGCACCATGT+CGG - chr5_3:18904726-18904745 None:intergenic 40.0%
! CAAGAATATTTGGAACTCCC+TGG - chr5_3:18905070-18905089 None:intergenic 40.0%
CAAACAGAATTCTGGTCCTT+GGG - chr5_3:18905137-18905156 None:intergenic 40.0%
GATAGACCATCAAACGTTCT+GGG - chr5_3:18905475-18905494 None:intergenic 40.0%
TGATAGACCATCAAACGTTC+TGG - chr5_3:18905476-18905495 None:intergenic 40.0%
! TCCTCAGAATGTTGTTGACT+TGG + chr5_3:18905517-18905536 Msa0803640:CDS 40.0%
ACCAAGTCAACAACATTCTG+AGG - chr5_3:18905521-18905540 None:intergenic 40.0%
TAATGCGAAGAAAGCAACTG+TGG + chr5_3:18905553-18905572 Msa0803640:CDS 40.0%
TCTCGTCAATCCAAGCAATA+GGG - chr5_3:18905658-18905677 None:intergenic 40.0%
!! GTTGGTAGTGCAGTTGTATA+TGG + chr5_3:18905983-18906002 Msa0803640:CDS 40.0%
GTAGTGCAGTTGTATATGGA+AGG + chr5_3:18905987-18906006 Msa0803640:CDS 40.0%
TGCAGTTGTATATGGAAGGT+TGG + chr5_3:18905991-18906010 Msa0803640:CDS 40.0%
TGCATCACTGTACTTGAGAA+GGG - chr5_3:18906091-18906110 None:intergenic 40.0%
TTGCATCACTGTACTTGAGA+AGG - chr5_3:18906092-18906111 None:intergenic 40.0%
TACAGTGATGCAATCACGAT+TGG + chr5_3:18906099-18906118 Msa0803640:CDS 40.0%
TCTAAATGCACACATGGCTT+TGG + chr5_3:18906259-18906278 Msa0803640:CDS 40.0%
! GGTCTTTTGCCGTGTAATAA+TGG + chr5_3:18906807-18906826 Msa0803640:CDS 40.0%
! CCGTGTAATAATGGGGAATA+TGG + chr5_3:18906816-18906835 Msa0803640:CDS 40.0%
CTATCATAGTCACCACTACT+GGG - chr5_3:18906874-18906893 None:intergenic 40.0%
ACTATCATAGTCACCACTAC+TGG - chr5_3:18906875-18906894 None:intergenic 40.0%
AGTAGTGGTGACTATGATAG+TGG + chr5_3:18906874-18906893 Msa0803640:CDS 40.0%
GTAGTGGTGACTATGATAGT+GGG + chr5_3:18906875-18906894 Msa0803640:CDS 40.0%
! TAGTGGTGACTATGATAGTG+GGG + chr5_3:18906876-18906895 Msa0803640:CDS 40.0%
CAACATATTCTGGACAGATG+TGG - chr5_3:18906957-18906976 None:intergenic 40.0%
TTCGGTTCATTCCATTTGGA+TGG + chr5_3:18907144-18907163 Msa0803640:intron 40.0%
GTTCATTCCATTTGGATGGA+GGG + chr5_3:18907148-18907167 Msa0803640:intron 40.0%
GAAGGAGAAATCAACATGCT+AGG - chr5_3:18907181-18907200 None:intergenic 40.0%
!! AGCATGTTGATTTCTCCTTC+TGG + chr5_3:18907181-18907200 Msa0803640:intron 40.0%
!! TGTTGATTTCTCCTTCTGGT+TGG + chr5_3:18907185-18907204 Msa0803640:intron 40.0%
! GTTGATTTCTCCTTCTGGTT+GGG + chr5_3:18907186-18907205 Msa0803640:intron 40.0%
TTGACAGATCACTTCATGTC+TGG + chr5_3:18907228-18907247 Msa0803640:intron 40.0%
! TGCAGGCATAATTAGGGTTT+TGG + chr5_3:18907776-18907795 Msa0803640:intron 40.0%
!! AGGCATAATTAGGGTTTTGG+AGG + chr5_3:18907779-18907798 Msa0803640:intron 40.0%
!!! CTGACTCATCATGGTTTTGA+AGG + chr5_3:18908021-18908040 Msa0803640:intron 40.0%
!! TTTGAATTCTGGGATACCTC+AGG + chr5_3:18908247-18908266 Msa0803640:intron 40.0%
!! TTGAATTCTGGGATACCTCA+GGG + chr5_3:18908248-18908267 Msa0803640:intron 40.0%
GCATCAATAAGCACAGGAAA+AGG - chr5_3:18908317-18908336 None:intergenic 40.0%
CTGGTAATTACCAGGCAAAA+AGG + chr5_3:18908480-18908499 Msa0803640:intron 40.0%
CTGGTAATTACCAGGCAAAA+AGG + chr5_3:18908480-18908499 Msa0803640:intron 40.0%
CTCTTGAGAGCTACAATAGT+TGG + chr5_3:18908611-18908630 Msa0803640:CDS 40.0%
!! AATAGTTGGCCTTCAAAGCA+AGG + chr5_3:18908625-18908644 Msa0803640:CDS 40.0%
GTAGCAGATAAACCATTCAC+TGG - chr5_3:18908689-18908708 None:intergenic 40.0%
TTTGATCACACGAGATGGTT+GGG - chr5_3:18908764-18908783 None:intergenic 40.0%
! TTTTGATCACACGAGATGGT+TGG - chr5_3:18908765-18908784 None:intergenic 40.0%
ACCATCTCGTGTGATCAAAA+TGG + chr5_3:18908765-18908784 Msa0803640:CDS 40.0%
!! TCCATTTTGATCACACGAGA+TGG - chr5_3:18908769-18908788 None:intergenic 40.0%
! CAGAGTGTTCCACATTAAGA+CGG - chr5_3:18908822-18908841 None:intergenic 40.0%
GCTATCGAAGTAGCAAACAA+TGG - chr5_3:18909124-18909143 None:intergenic 40.0%
TTCGGTGGTAGATTAGGGAT+TGG + chr5_3:18903118-18903137 Msa0803640:intron 45.0%
!! GGCTTTGTTTGGAAGTTAGG+AGG + chr5_3:18904343-18904362 Msa0803640:intron 45.0%
! GGAATCCATCAACCTTTTGG+GGG + chr5_3:18904386-18904405 Msa0803640:intron 45.0%
AAACACCCCCAAAAGGTTGA+TGG - chr5_3:18904394-18904413 None:intergenic 45.0%
!!! CAACCTTTTGGGGGTGTTTT+TGG + chr5_3:18904395-18904414 Msa0803640:intron 45.0%
!!! CTTTTGGGGGTGTTTTTGGA+GGG + chr5_3:18904399-18904418 Msa0803640:intron 45.0%
!!! TTTTGGGGGTGTTTTTGGAG+GGG + chr5_3:18904400-18904419 Msa0803640:intron 45.0%
TGTGAGATCACTATGCAAGG+TGG + chr5_3:18904511-18904530 Msa0803640:intron 45.0%
GTGAGATCACTATGCAAGGT+GGG + chr5_3:18904512-18904531 Msa0803640:intron 45.0%
GGAAGGGATTTGAGGAGAAA+GGG - chr5_3:18904565-18904584 None:intergenic 45.0%
AAATGGAGGGAAGGGATTTG+AGG - chr5_3:18904573-18904592 None:intergenic 45.0%
!! TTTGGGAGTTGGTGGAGAAA+TGG - chr5_3:18904590-18904609 None:intergenic 45.0%
!! TTTGGGCTTTGTTTGGGAGT+TGG - chr5_3:18904601-18904620 None:intergenic 45.0%
AACTCCCAAACAAAGCCCAA+AGG + chr5_3:18904600-18904619 Msa0803640:intron 45.0%
AGCCACCCCATTTAACCTTT+GGG - chr5_3:18904618-18904637 None:intergenic 45.0%
! ACCTTTTATAGCAGCCGACA+TGG + chr5_3:18904709-18904728 Msa0803640:intron 45.0%
! ACCATGTCGGCTGCTATAAA+AGG - chr5_3:18904713-18904732 None:intergenic 45.0%
! TCTAAAGCACTTCAGCTTCC+AGG - chr5_3:18904924-18904943 None:intergenic 45.0%
! CAAACAAACTGTGCTGGTGA+GGG - chr5_3:18905108-18905127 None:intergenic 45.0%
! TCAAACAAACTGTGCTGGTG+AGG - chr5_3:18905109-18905128 None:intergenic 45.0%
CCAAACAGAATTCTGGTCCT+TGG - chr5_3:18905138-18905157 None:intergenic 45.0%
CCAAGGACCAGAATTCTGTT+TGG + chr5_3:18905135-18905154 Msa0803640:five_prime_UTR 45.0%
GCAGCAACCAAACAGAATTC+TGG - chr5_3:18905145-18905164 None:intergenic 45.0%
GGGTTGTGCTTAATCTGAAG+CGG + chr5_3:18905249-18905268 Msa0803640:CDS 45.0%
CCACATGCTACATGTCCAAA+CGG + chr5_3:18905284-18905303 Msa0803640:CDS 45.0%
GACTCATATTGGACGGTCAT+TGG + chr5_3:18905415-18905434 Msa0803640:CDS 45.0%
ACTGTGGAGGTAGAGTTACA+TGG + chr5_3:18905569-18905588 Msa0803640:CDS 45.0%
GTCTCGTCAATCCAAGCAAT+AGG - chr5_3:18905659-18905678 None:intergenic 45.0%
ATTGCTTGGATTGACGAGAC+AGG + chr5_3:18905659-18905678 Msa0803640:CDS 45.0%
TTGCTTGGATTGACGAGACA+GGG + chr5_3:18905660-18905679 Msa0803640:CDS 45.0%
TCCTGATTGCAGGGATCATA+AGG - chr5_3:18905728-18905747 None:intergenic 45.0%
TCTCCACTATCCTGATTGCA+GGG - chr5_3:18905737-18905756 None:intergenic 45.0%
TTCTCCACTATCCTGATTGC+AGG - chr5_3:18905738-18905757 None:intergenic 45.0%
!! TCAGGATAGTGGAGAAAGTC+AGG + chr5_3:18905742-18905761 Msa0803640:CDS 45.0%
GCATCACTGTACTTGAGAAG+GGG - chr5_3:18906090-18906109 None:intergenic 45.0%
!! GCTTGGCTTGCTTCTTCTAA+AGG + chr5_3:18906184-18906203 Msa0803640:CDS 45.0%
ACTATGATGAAGTGTGGGCT+TGG + chr5_3:18906217-18906236 Msa0803640:CDS 45.0%
GGTTCATTCCATTTGGATGG+AGG + chr5_3:18907147-18907166 Msa0803640:intron 45.0%
GATGAAACCCTCCATCCAAA+TGG - chr5_3:18907158-18907177 None:intergenic 45.0%
! CAAAGGAAATTTGGCATCGG+AGG - chr5_3:18907488-18907507 None:intergenic 45.0%
ATACCTCAGGGAATAGCATC+TGG + chr5_3:18908260-18908279 Msa0803640:intron 45.0%
!! AAAGGCATTGAAGGGGATGT+TGG - chr5_3:18908299-18908318 None:intergenic 45.0%
!! CACAGGAAAAGGCATTGAAG+GGG - chr5_3:18908306-18908325 None:intergenic 45.0%
!! GCACAGGAAAAGGCATTGAA+GGG - chr5_3:18908307-18908326 None:intergenic 45.0%
!! AGCACAGGAAAAGGCATTGA+AGG - chr5_3:18908308-18908327 None:intergenic 45.0%
!! CTGAGAGCATCAATAAGCAC+AGG - chr5_3:18908323-18908342 None:intergenic 45.0%
CAGAAACAAGGTTTCTGCGA+AGG + chr5_3:18908340-18908359 Msa0803640:CDS 45.0%
CAAGGTTTCTGCGAAGGATA+TGG + chr5_3:18908346-18908365 Msa0803640:CDS 45.0%
!! TTAAATTATAATATAGATTA+GGG - chr5_3:18903162-18903181 None:intergenic 5.0%
!! ATTAAATTATAATATAGATT+AGG - chr5_3:18903163-18903182 None:intergenic 5.0%
ACAGTGTGAACGAACACGCA+CGG + chr5_3:18902610-18902629 Msa0803640:five_prime_UTR 50.0%
!! GGTTTTTAAGGGTGGCGGTT+TGG - chr5_3:18902643-18902662 None:intergenic 50.0%
!! TCTGGCAGGGTTTTTAAGGG+TGG - chr5_3:18902651-18902670 None:intergenic 50.0%
! GGGTCTGGCAGGGTTTTTAA+GGG - chr5_3:18902654-18902673 None:intergenic 50.0%
! TGGGTCTGGCAGGGTTTTTA+AGG - chr5_3:18902655-18902674 None:intergenic 50.0%
! CTCGCTTCCATCTAGGGTTA+GGG + chr5_3:18902720-18902739 Msa0803640:five_prime_UTR 50.0%
CGATGAACCCTAACCCTAGA+TGG - chr5_3:18902730-18902749 None:intergenic 50.0%
GTTTGGAAGTTAGGAGGGAC+AGG + chr5_3:18904349-18904368 Msa0803640:intron 50.0%
GAAGTTAGGAGGGACAGGTA+GGG + chr5_3:18904354-18904373 Msa0803640:intron 50.0%
GGACAGGTAGGGAAAAAGAG+TGG + chr5_3:18904365-18904384 Msa0803640:intron 50.0%
CCTCCAAAAACACCCCCAAA+AGG - chr5_3:18904401-18904420 None:intergenic 50.0%
!!! CCTTTTGGGGGTGTTTTTGG+AGG + chr5_3:18904398-18904417 Msa0803640:intron 50.0%
AAAGGGATGAGCAAGGGGAA+GGG - chr5_3:18904548-18904567 None:intergenic 50.0%
AGGAGAAAGGGATGAGCAAG+GGG - chr5_3:18904553-18904572 None:intergenic 50.0%
GAGGAGAAAGGGATGAGCAA+GGG - chr5_3:18904554-18904573 None:intergenic 50.0%
TGAGGAGAAAGGGATGAGCA+AGG - chr5_3:18904555-18904574 None:intergenic 50.0%
GGGAAGGGATTTGAGGAGAA+AGG - chr5_3:18904566-18904585 None:intergenic 50.0%
TGGTGGAGAAATGGAGGGAA+GGG - chr5_3:18904581-18904600 None:intergenic 50.0%
TTGGTGGAGAAATGGAGGGA+AGG - chr5_3:18904582-18904601 None:intergenic 50.0%
!! GGAGTTGGTGGAGAAATGGA+GGG - chr5_3:18904586-18904605 None:intergenic 50.0%
AGCCCAAAGGTTAAATGGGG+TGG + chr5_3:18904613-18904632 Msa0803640:intron 50.0%
CAGCCACCCCATTTAACCTT+TGG - chr5_3:18904619-18904638 None:intergenic 50.0%
CATGGAGGCAAACAACGGAA+AGG + chr5_3:18905217-18905236 Msa0803640:exon 50.0%
! GGCAAACAACGGAAAGGCAT+CGG + chr5_3:18905223-18905242 Msa0803640:CDS 50.0%
!! ACAACGGAAAGGCATCGGAT+AGG + chr5_3:18905228-18905247 Msa0803640:CDS 50.0%
!! CAACGGAAAGGCATCGGATA+GGG + chr5_3:18905229-18905248 Msa0803640:CDS 50.0%
CCGTTTGGACATGTAGCATG+TGG - chr5_3:18905287-18905306 None:intergenic 50.0%
TGCGAAGAAAGCAACTGTGG+AGG + chr5_3:18905556-18905575 Msa0803640:CDS 50.0%
GCCTTATGATCCCTGCAATC+AGG + chr5_3:18905724-18905743 Msa0803640:CDS 50.0%
GATCCCTGCAATCAGGATAG+TGG + chr5_3:18905731-18905750 Msa0803640:CDS 50.0%
TGGAGTCGATGCTTCCAAGT+TGG + chr5_3:18905820-18905839 Msa0803640:CDS 50.0%
GGAGTCGATGCTTCCAAGTT+GGG + chr5_3:18905821-18905840 Msa0803640:CDS 50.0%
GAGTCGATGCTTCCAAGTTG+GGG + chr5_3:18905822-18905841 Msa0803640:CDS 50.0%
! AGTCGATGCTTCCAAGTTGG+GGG + chr5_3:18905823-18905842 Msa0803640:CDS 50.0%
! AAGTGTGGGCTTGGTCATTG+TGG + chr5_3:18906226-18906245 Msa0803640:CDS 50.0%
! CTGCTACCTTTCCTTTTGCC+AGG + chr5_3:18906296-18906315 Msa0803640:CDS 50.0%
CGAAAATGGGGTTCGACACT+TGG + chr5_3:18906786-18906805 Msa0803640:CDS 50.0%
AATATGGAGCTTCTCCGTCC+TGG + chr5_3:18906832-18906851 Msa0803640:CDS 50.0%
GAAACTGTCTAGTGCCAGGA+CGG - chr5_3:18906849-18906868 None:intergenic 50.0%
AGACAGTTTCGTCCCAGTAG+TGG + chr5_3:18906859-18906878 Msa0803640:CDS 50.0%
!! TGGTGACTATGATAGTGGGG+TGG + chr5_3:18906879-18906898 Msa0803640:CDS 50.0%
AAGGTCTCTTCTGCTGCTGA+AGG + chr5_3:18906985-18907004 Msa0803640:CDS 50.0%
! TGTACGAGTGCCCTTCCTTT+TGG + chr5_3:18907285-18907304 Msa0803640:intron 50.0%
GAACCAGATGCTATTCCCTG+AGG - chr5_3:18908266-18908285 None:intergenic 50.0%
! ATAGCATCTGGTTCGCGTAG+AGG + chr5_3:18908272-18908291 Msa0803640:CDS 50.0%
! AGCGAGTCATCCTTTTTGCC+TGG - chr5_3:18908493-18908512 None:intergenic 50.0%
! CACGAGTCATCCTTTTTGCC+TGG - chr5_3:18908547-18908566 None:intergenic 50.0%
TTGCATGGGACTCCAGTGAA+TGG + chr5_3:18908674-18908693 Msa0803640:intron 50.0%
ATCACACGAGATGGTTGGGA+GGG - chr5_3:18908760-18908779 None:intergenic 50.0%
CACTTTGCGCCGTAGATTGT+TGG + chr5_3:18909050-18909069 Msa0803640:three_prime_UTR 50.0%
!! CAAGTGGGTGGGTTGACTCA+CGG - chr5_3:18902527-18902546 None:intergenic 55.0%
CGTTATCTCACGCGCCAAGT+GGG - chr5_3:18902542-18902561 None:intergenic 55.0%
TCGTTATCTCACGCGCCAAG+TGG - chr5_3:18902543-18902562 None:intergenic 55.0%
!! GGCAGGGTTTTTAAGGGTGG+CGG - chr5_3:18902648-18902667 None:intergenic 55.0%
GTGAGAGATTGGGTCTGGCA+GGG - chr5_3:18902664-18902683 None:intergenic 55.0%
AGTGAGAGATTGGGTCTGGC+AGG - chr5_3:18902665-18902684 None:intergenic 55.0%
CCTGAGTGAGAGATTGGGTC+TGG - chr5_3:18902669-18902688 None:intergenic 55.0%
CCAGACCCAATCTCTCACTC+AGG + chr5_3:18902666-18902685 Msa0803640:five_prime_UTR 55.0%
ACGCGCCTGAGTGAGAGATT+GGG - chr5_3:18902674-18902693 None:intergenic 55.0%
AACCCTAGATGGAAGCGAGG+CGG - chr5_3:18902719-18902738 None:intergenic 55.0%
CCTAACCCTAGATGGAAGCG+AGG - chr5_3:18902722-18902741 None:intergenic 55.0%
! CCTCGCTTCCATCTAGGGTT+AGG + chr5_3:18902719-18902738 Msa0803640:five_prime_UTR 55.0%
TGGAGGGTAACTGCAGTGCT+TGG + chr5_3:18903319-18903338 Msa0803640:five_prime_UTR 55.0%
GGAAGTTAGGAGGGACAGGT+AGG + chr5_3:18904353-18904372 Msa0803640:intron 55.0%
GAAAGGGATGAGCAAGGGGA+AGG - chr5_3:18904549-18904568 None:intergenic 55.0%
!! GGGAGTTGGTGGAGAAATGG+AGG - chr5_3:18904587-18904606 None:intergenic 55.0%
!! GGGCTTTGTTTGGGAGTTGG+TGG - chr5_3:18904598-18904617 None:intergenic 55.0%
! AAACTGTGCTGGTGAGGGTG+AGG - chr5_3:18905103-18905122 None:intergenic 55.0%
ACTGGTCGCAGATCTCCGTT+TGG - chr5_3:18905302-18905321 None:intergenic 55.0%
GATACAAGTGATGCCCAGCG+AGG - chr5_3:18905329-18905348 None:intergenic 55.0%
TGGACGCCCAGAACGTTTGA+TGG + chr5_3:18905466-18905485 Msa0803640:CDS 55.0%
GTTTGCAGCGCCCTATTGCT+TGG + chr5_3:18905645-18905664 Msa0803640:CDS 55.0%
GGACGAAACTGTCTAGTGCC+AGG - chr5_3:18906853-18906872 None:intergenic 55.0%
AGCTCAAGTGCCCAACCAGA+AGG - chr5_3:18907199-18907218 None:intergenic 55.0%
GATCACACGAGATGGTTGGG+AGG - chr5_3:18908761-18908780 None:intergenic 55.0%
CGTGAGTCAACCCACCCACT+TGG + chr5_3:18902525-18902544 Msa0803640:five_prime_UTR 60.0%
ATCTCACGCGCCAAGTGGGT+GGG - chr5_3:18902538-18902557 None:intergenic 60.0%
TATCTCACGCGCCAAGTGGG+TGG - chr5_3:18902539-18902558 None:intergenic 60.0%
GACGCGCCTGAGTGAGAGAT+TGG - chr5_3:18902675-18902694 None:intergenic 60.0%
GAAGCGAGGCGGTGGAGAAA+AGG - chr5_3:18902708-18902727 None:intergenic 60.0%
CACCGCCTCGCTTCCATCTA+GGG + chr5_3:18902714-18902733 Msa0803640:five_prime_UTR 60.0%
!!! TGGGGGTGTTTTTGGAGGGG+AGG + chr5_3:18904403-18904422 Msa0803640:intron 60.0%
!!! GGGGGTGTTTTTGGAGGGGA+GGG + chr5_3:18904404-18904423 Msa0803640:intron 60.0%
!!! GGGGTGTTTTTGGAGGGGAG+GGG + chr5_3:18904405-18904424 Msa0803640:intron 60.0%
TGCGACCAGTGTTACCTCGC+TGG + chr5_3:18905312-18905331 Msa0803640:CDS 60.0%
GCGACCAGTGTTACCTCGCT+GGG + chr5_3:18905313-18905332 Msa0803640:CDS 60.0%
GATGCCCAGCGAGGTAACAC+TGG - chr5_3:18905320-18905339 None:intergenic 60.0%
! TCCAAGTTGGGGGAGTGCAC+AGG + chr5_3:18905833-18905852 Msa0803640:CDS 60.0%
! CCAAGTTGGGGGAGTGCACA+GGG + chr5_3:18905834-18905853 Msa0803640:CDS 60.0%
! CAAGTTGGGGGAGTGCACAG+GGG + chr5_3:18905835-18905854 Msa0803640:CDS 60.0%
GCACTCGTACAGCTTGGCAG+GGG - chr5_3:18907276-18907295 None:intergenic 60.0%
GGCACTCGTACAGCTTGGCA+GGG - chr5_3:18907277-18907296 None:intergenic 60.0%
!! GGAAGGGCACTCGTACAGCT+TGG - chr5_3:18907282-18907301 None:intergenic 60.0%
CCTAGATGGAAGCGAGGCGG+TGG - chr5_3:18902716-18902735 None:intergenic 65.0%
CCACCGCCTCGCTTCCATCT+AGG + chr5_3:18902713-18902732 Msa0803640:five_prime_UTR 65.0%
GGGATGAGCAAGGGGAAGGG+AGG - chr5_3:18904545-18904564 None:intergenic 65.0%
CCCTGTGCACTCCCCCAACT+TGG - chr5_3:18905837-18905856 None:intergenic 65.0%
GGGCACTCGTACAGCTTGGC+AGG - chr5_3:18907278-18907297 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 18902517 18909206 18902517 ID=Msa0803640;Name=Msa0803640
chr5_3 mRNA 18902517 18909206 18902517 ID=Msa0803640-mRNA-1;Parent=Msa0803640;Name=Msa0803640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=515|1|1|1|0.71|0.62|8|408|573
chr5_3 exon 18902517 18902827 18902517 ID=Msa0803640-mRNA-1:exon:7761;Parent=Msa0803640-mRNA-1
chr5_3 exon 18903284 18903340 18903284 ID=Msa0803640-mRNA-1:exon:7762;Parent=Msa0803640-mRNA-1
chr5_3 exon 18905071 18906317 18905071 ID=Msa0803640-mRNA-1:exon:7763;Parent=Msa0803640-mRNA-1
chr5_3 exon 18906765 18907006 18906765 ID=Msa0803640-mRNA-1:exon:7764;Parent=Msa0803640-mRNA-1
chr5_3 exon 18907354 18907457 18907354 ID=Msa0803640-mRNA-1:exon:7765;Parent=Msa0803640-mRNA-1
chr5_3 exon 18908269 18908400 18908269 ID=Msa0803640-mRNA-1:exon:7766;Parent=Msa0803640-mRNA-1
chr5_3 exon 18908548 18908646 18908548 ID=Msa0803640-mRNA-1:exon:7767;Parent=Msa0803640-mRNA-1
chr5_3 exon 18908754 18909206 18908754 ID=Msa0803640-mRNA-1:exon:7768;Parent=Msa0803640-mRNA-1
chr5_3 five_prime_UTR 18902517 18902827 18902517 ID=Msa0803640-mRNA-1:five_prime_utr;Parent=Msa0803640-mRNA-1
chr5_3 five_prime_UTR 18903284 18903340 18903284 ID=Msa0803640-mRNA-1:five_prime_utr;Parent=Msa0803640-mRNA-1
chr5_3 five_prime_UTR 18905071 18905217 18905071 ID=Msa0803640-mRNA-1:five_prime_utr;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18905218 18906317 18905218 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18906765 18907006 18906765 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18907354 18907457 18907354 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18908269 18908400 18908269 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18908548 18908646 18908548 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 CDS 18908754 18908798 18908754 ID=Msa0803640-mRNA-1:cds;Parent=Msa0803640-mRNA-1
chr5_3 three_prime_UTR 18908799 18909206 18908799 ID=Msa0803640-mRNA-1:three_prime_utr;Parent=Msa0803640-mRNA-1
Gene Sequence

>Msa0803640

ATGGAGGCAAACAACGGAAAGGCATCGGATAGGGTTGTGCTTAATCTGAAGCGGAAACATGCTTCTCCACATGCTACATGTCCAAACGGAGATCTGCGACCAGTGTTACCTCGCTGGGCATCACTTGTATCTCCAAGAAACGAAGTTGTCAAACAGATGAAATTGAACAGTTACAAGAGCAAACCGACGAAATCAGAGACTCATATTGGACGGTCATTGGTTAGATATTATATGAATTATAAGAAGAGTGGACGCCCAGAACGTTTGATGGTCTATCAAAATGGTGAATGGAAGGACTTTCCTCAGAATGTTGTTGACTTGGTTAGGAAAGATTTTAATGCGAAGAAAGCAACTGTGGAGGTAGAGTTACATGGCCATCATCTTGTGCTGAATTTTTTGCACATGTATCAGATGAATTTGAAATCTGGTTTGCAGCGCCCTATTGCTTGGATTGACGAGACAGGGTGCTGCTTTTTCCCTGAAATTTATGCTGATTCTGATGAAGAGCCTTATGATCCCTGCAATCAGGATAGTGGAGAAAGTCAGGAATCATTGTTCCAAGATCCTAATGATATTAAATTACATTTAGAAATTGAAATAAATGGAGTCGATGCTTCCAAGTTGGGGGAGTGCACAGGGGAGTCCAATGTTATAGTTAAGCATACTCAAATTGATGCTAAACAAAATGATTTAGAAATTGAAGATAGTAGCAATAACATGGGAAATGGAAATGTTGGTGAAGCCGTTGAGCAAAATAAAAATATAGTTGGTAGTGCAGTTGTATATGGAAGGTTGGATTTGGATACTGTACAGAAGATGTTTCTTAAGGGAACTAGTAGTTTTGGTAGTGCTGACATAGTTGAGATTTACCCCTTCTCAAGTACAGTGATGCAATCACGATTGGAGCTGTTTGAGAAGCAAGCTGAAATTACGAAAAATTGTCGTGGGGATGCTAATGTTCGATATGCTTGGCTTGCTTCTTCTAAAGGAGAACTATCTACTATGATGAAGTGTGGGCTTGGTCATTGTGGAATATCTACATCTAAATGCACACATGGCTTTGGTGTTCATCTTGCAGCTGCTACCTTTCCTTTTGCCAGTGCTAGTCATTGTGATATTGACGAAAATGGGGTTCGACACTTGGTCTTTTGCCGTGTAATAATGGGGAATATGGAGCTTCTCCGTCCTGGCACTAGACAGTTTCGTCCCAGTAGTGGTGACTATGATAGTGGGGTGGATGACATCCACAATCCAAGATACTATATAGTATGGAATATGAATACGAACACCCACATCTGTCCAGAATATGTTGTTAGTTTCAAGGTCTCTTCTGCTGCTGAAGGCCTTCTTTTAGGAAGTAAGACTAAGAATAATATTTTTGGGGTTAACTCAGCTAGCCGAAGTCCTAAAATCTTGTCACGTTCAGAATCTTCTACAGTAGACACTGGAATAGCATCTGGTTCGCGTAGAGGTCCAACATCCCCTTCAATGCCTTTTCCTGTGCTTATTGATGCTCTCAGAAACAAGGTTTCTGCGAAGGATATGGAAGTTATCAATATGCATTATCTGCAATTCAGGGCAAAAAGGATGACTCGTGATGATTTTGCGAAGAAGTTGAGGTTGATTGTGCGAGATGATGCTCTCTTGAGAGCTACAATAGTTGGCCTTCAAAGCAAGATGCCCTCCCAACCATCTCGTGTGATCAAAATGGAACCTTGTTAA
Protein sequence

>Msa0803640

MEANNGKASDRVVLNLKRKHASPHATCPNGDLRPVLPRWASLVSPRNEVVKQMKLNSYKSKPTKSETHIGRSLVRYYMNYKKSGRPERLMVYQNGEWKDFPQNVVDLVRKDFNAKKATVEVELHGHHLVLNFLHMYQMNLKSGLQRPIAWIDETGCCFFPEIYADSDEEPYDPCNQDSGESQESLFQDPNDIKLHLEIEINGVDASKLGECTGESNVIVKHTQIDAKQNDLEIEDSSNNMGNGNVGEAVEQNKNIVGSAVVYGRLDLDTVQKMFLKGTSSFGSADIVEIYPFSSTVMQSRLELFEKQAEITKNCRGDANVRYAWLASSKGELSTMMKCGLGHCGISTSKCTHGFGVHLAAATFPFASASHCDIDENGVRHLVFCRVIMGNMELLRPGTRQFRPSSGDYDSGVDDIHNPRYYIVWNMNTNTHICPEYVVSFKVSSAAEGLLLGSKTKNNIFGVNSASRSPKILSRSESSTVDTGIASGSRRGPTSPSMPFPVLIDALRNKVSAKDMEVINMHYLQFRAKRMTRDDFAKKLRLIVRDDALLRATIVGLQSKMPSQPSRVIKMEPC*